resistance protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 4291, 5171 |
| Acc36I | ACCTGC | 1 cut(s) | 224 |
| AccB1I | GGYRCC | 1 cut(s) | 3241 |
| AccBSI | CCGCTC | 2 cut(s) | 63, 460 |
| AccI | GTMKAC | 4 cut(s) | 1719, 2429, 4001, 4283 |
| AccII | CGCG | 5 cut(s) | 51, 93, 229, 448, 4507 |
| AccIII | TCCGGA | 2 cut(s) | 1144, 1909 |
| AclWI | GGATC | 8 cut(s) | 269, 848, 891, 1490, 3001, 3533, 4095, 4434 |
| AcoI | YGGCCR | 1 cut(s) | 4609 |
| AcuI | CTGAAG | 9 cut(s) | 1559, 1587, 1652, 2049, 2315, 3218, 3408, 3465, 4552 |
| AcyI | GRCGYC | 1 cut(s) | 5090 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 196, 548, 1909, 2513, 5317 |
| AflII | CTTAAG | 1 cut(s) | 5347 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 827 |
| AhlI | ACTAGT | 1 cut(s) | 2696 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1814, 1846, 3926, 3958 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3696, 3728 |
| Alw21I | GWGCWC | 3 cut(s) | 122, 3265, 3767 |
| Alw44I | GTGCAC | 1 cut(s) | 3763 |
| AlwI | GGATC | 8 cut(s) | 269, 848, 891, 1490, 3001, 3533, 4095, 4434 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2263 |
| Ama87I | CYCGRG | 3 cut(s) | 674, 3200, 4434 |
| Aor13HI | TCCGGA | 2 cut(s) | 1144, 1909 |
| AoxI | GGCC | 5 cut(s) | 12, 379, 409, 1666, 4609 |
| ApaLI | GTGCAC | 1 cut(s) | 3763 |
| ApeKI | GCWGC | 6 cut(s) | 57, 454, 1245, 2346, 3117, 4303 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 5174, 5206 |
| AseI | ATTAAT | 1 cut(s) | 1776 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1572, 1626, 3797, 4985 |
| AspLEI | GCGC | 2 cut(s) | 95, 292 |
| AspS9I | GGNCC | 7 cut(s) | 380, 443, 613, 695, 1423, 1469, 3952 |
| AsuHPI | GGTGA | 5 cut(s) | 1042, 1097, 1558, 2495, 4424 |
| AsuII | TTCGAA | 1 cut(s) | 1316 |
| AsuNHI | GCTAGC | 1 cut(s) | 83 |
| AvaI | CYCGRG | 3 cut(s) | 674, 3200, 4434 |
| AvaII | GGWCC | 6 cut(s) | 443, 613, 695, 1423, 1469, 3952 |
| BaeGI | GKGCMC | 3 cut(s) | 3246, 3767, 5368 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1979, 2012 |
| BanI | GGYRCC | 1 cut(s) | 3241 |
| BanII | GRGCYC | 1 cut(s) | 122 |
| BauI | CACGAG | 1 cut(s) | 5274 |
| BbsI | GAAGAC | 3 cut(s) | 877, 4137, 4945 |
| Bbv12I | GWGCWC | 3 cut(s) | 122, 3265, 3767 |
| BbvI | GCAGC | 6 cut(s) | 69, 466, 1257, 2333, 3129, 4290 |
| BceAI | ACGGC | 5 cut(s) | 208, 2408, 3826, 4596, 5200 |
| BclI | TGATCA | 2 cut(s) | 2086, 3487 |
| BcuI | ACTAGT | 1 cut(s) | 2696 |
| BfmI | CTRYAG | 2 cut(s) | 2106, 5356 |
| BfoI | RGCGCY | 1 cut(s) | 293 |
| BfrI | CTTAAG | 1 cut(s) | 5347 |
| BfuAI | ACCTGC | 1 cut(s) | 224 |
| BglII | AGATCT | 2 cut(s) | 3643, 5398 |
| Bme18I | GGWCC | 6 cut(s) | 443, 613, 695, 1423, 1469, 3952 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 827 |
| BmeT110I | CYCGRG | 3 cut(s) | 674, 3200, 4434 |
| BmgT120I | GGNCC | 7 cut(s) | 380, 443, 613, 695, 1423, 1469, 3952 |
| BmiI | GGNNCC | 4 cut(s) | 382, 2451, 3097, 3243 |
| BmrI | ACTGGG | 4 cut(s) | 830, 2781, 3549, 4933 |
| BmtI | GCTAGC | 1 cut(s) | 87 |
| BmuI | ACTGGG | 4 cut(s) | 830, 2781, 3549, 4933 |
| BoxI | GACNNNNGTC | 3 cut(s) | 2277, 4873, 5124 |
| BpiI | GAAGAC | 3 cut(s) | 877, 4137, 4945 |
| BpmI | CTGGAG | 5 cut(s) | 2418, 2696, 2906, 3624, 4120 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4151 |
| Bpu14I | TTCGAA | 1 cut(s) | 1316 |
| BpuEI | CTTGAG | 7 cut(s) | 1274, 2480, 2507, 2618, 4208, 4463, 5210 |
| Bsa29I | ATCGAT | 1 cut(s) | 689 |
| BsaAI | YACGTR | 2 cut(s) | 561, 3414 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3081 |
| BsaHI | GRCGYC | 1 cut(s) | 5090 |
| BsaI | GGTCTC | 1 cut(s) | 4837 |
| BsaWI | WCCGGW | 6 cut(s) | 114, 548, 1144, 1909, 2311, 4659 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 104, 123, 134, 153, 1521, 1551, 1914, 1944 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 196, 548, 1909, 2513, 5317 |
| Bse1I | ACTGG | 9 cut(s) | 836, 2740, 2787, 3042, 3273, 3555, 4072, 4137, 4928 |
| Bse3DI | GCAATG | 2 cut(s) | 1836, 4464 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3081 |
| BseAI | TCCGGA | 2 cut(s) | 1144, 1909 |
| BseCI | ATCGAT | 1 cut(s) | 689 |
| BseJI | GATNNNNATC | 1 cut(s) | 3081 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 196, 548, 1909, 2513, 5317 |
| BseMI | GCAATG | 2 cut(s) | 1836, 4464 |
| BseMII | CTCAG | 9 cut(s) | 852, 1244, 1316, 1528, 2172, 2436, 3379, 4243, 4826 |
| BseNI | ACTGG | 9 cut(s) | 836, 2740, 2787, 3042, 3273, 3555, 4072, 4137, 4928 |
| BseRI | GAGGAG | 2 cut(s) | 139, 2114 |
| BseSI | GKGCMC | 3 cut(s) | 3246, 3767, 5368 |
| BseXI | GCAGC | 6 cut(s) | 69, 466, 1257, 2333, 3129, 4290 |
| BsgI | GTGCAG | 3 cut(s) | 1308, 1539, 4608 |
| Bsh1236I | CGCG | 5 cut(s) | 51, 93, 229, 448, 4507 |
| BshFI | GGCC | 5 cut(s) | 14, 381, 411, 1668, 4611 |
| BshNI | GGYRCC | 1 cut(s) | 3241 |
| BshVI | ATCGAT | 1 cut(s) | 689 |
| BsiHKAI | GWGCWC | 3 cut(s) | 122, 3265, 3767 |
| BsiHKCI | CYCGRG | 3 cut(s) | 674, 3200, 4434 |
| BsiSI | CCGG | 6 cut(s) | 115, 549, 1145, 1910, 2312, 4660 |
| BsiWI | CGTACG | 1 cut(s) | 561 |
| BslFI | GGGAC | 8 cut(s) | 216, 834, 2285, 2581, 2707, 3717, 4417, 5077 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 196, 548, 1909, 2513, 5317 |
| BsmBI | CGTCTC | 3 cut(s) | 432, 654, 2786 |
| BsmFI | GGGAC | 8 cut(s) | 216, 834, 2285, 2581, 2707, 3717, 4417, 5077 |
| BsmI | GAATGC | 5 cut(s) | 85, 2338, 2391, 2571, 2885 |
| BsnI | GGCC | 5 cut(s) | 14, 381, 411, 1668, 4611 |
| Bso31I | GGTCTC | 1 cut(s) | 4837 |
| BsoBI | CYCGRG | 3 cut(s) | 674, 3200, 4434 |
| Bsp119I | TTCGAA | 1 cut(s) | 1316 |
| Bsp1286I | GDGCHC | 5 cut(s) | 122, 3246, 3265, 3767, 5368 |
| Bsp13I | TCCGGA | 2 cut(s) | 1144, 1909 |
| Bsp1407I | TGTACA | 4 cut(s) | 1342, 1921, 2483, 4497 |
| Bsp19I | CCATGG | 2 cut(s) | 816, 5231 |
| BspANI | GGCC | 5 cut(s) | 14, 381, 411, 1668, 4611 |
| BspCNI | CTCAG | 9 cut(s) | 853, 1243, 1317, 1527, 2171, 2437, 3378, 4242, 4825 |
| BspDI | ATCGAT | 1 cut(s) | 689 |
| BspEI | TCCGGA | 2 cut(s) | 1144, 1909 |
| BspFNI | CGCG | 5 cut(s) | 51, 93, 229, 448, 4507 |
| BspLI | GGNNCC | 4 cut(s) | 382, 2451, 3097, 3243 |
| BspMAI | CTGCAG | 1 cut(s) | 2110 |
| BspMI | ACCTGC | 1 cut(s) | 224 |
| BspOI | GCTAGC | 1 cut(s) | 87 |
| BspPI | GGATC | 8 cut(s) | 269, 848, 891, 1490, 3001, 3533, 4095, 4434 |
| BspQI | GCTCTTC | 2 cut(s) | 1578, 2025 |
| BspT104I | TTCGAA | 1 cut(s) | 1316 |
| BspT107I | GGYRCC | 1 cut(s) | 3241 |
| BspTI | CTTAAG | 1 cut(s) | 5347 |
| BspTNI | GGTCTC | 1 cut(s) | 4837 |
| BsrBI | CCGCTC | 2 cut(s) | 63, 460 |
| BsrDI | GCAATG | 2 cut(s) | 1836, 4464 |
| BsrGI | TGTACA | 4 cut(s) | 1342, 1921, 2483, 4497 |
| BsrI | ACTGG | 9 cut(s) | 836, 2740, 2787, 3042, 3273, 3555, 4072, 4137, 4928 |
| BssNAI | GTATAC | 1 cut(s) | 4002 |
| BssNI | GRCGYC | 1 cut(s) | 5090 |
| BssSI | CACGAG | 1 cut(s) | 5274 |
| BssT1I | CCWWGG | 4 cut(s) | 406, 816, 2968, 5231 |
| Bst1107I | GTATAC | 1 cut(s) | 4002 |
| Bst2BI | CACGAG | 1 cut(s) | 5274 |
| Bst6I | CTCTTC | 2 cut(s) | 1578, 2025 |
| BstACI | GRCGYC | 1 cut(s) | 5090 |
| BstAFI | CTTAAG | 1 cut(s) | 5347 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2105, 4352, 4361 |
| BstAUI | TGTACA | 4 cut(s) | 1342, 1921, 2483, 4497 |
| BstBAI | YACGTR | 2 cut(s) | 561, 3414 |
| BstBI | TTCGAA | 1 cut(s) | 1316 |
| BstC8I | GCNNGC | 7 cut(s) | 85, 221, 399, 2672, 3276, 4509, 4667 |
| BstDSI | CCRYGG | 4 cut(s) | 816, 3909, 4505, 5231 |
| BstFNI | CGCG | 5 cut(s) | 51, 93, 229, 448, 4507 |
| BstH2I | RGCGCY | 1 cut(s) | 293 |
| BstHHI | GCGC | 2 cut(s) | 95, 292 |
| BstNSI | RCATGY | 3 cut(s) | 401, 1845, 4669 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 2277, 4873, 5124 |
| BstSFI | CTRYAG | 2 cut(s) | 2106, 5356 |
| BstSLI | GKGCMC | 3 cut(s) | 3246, 3767, 5368 |
| BstUI | CGCG | 5 cut(s) | 51, 93, 229, 448, 4507 |
| BstV1I | GCAGC | 6 cut(s) | 69, 466, 1257, 2333, 3129, 4290 |
| BstV2I | GAAGAC | 3 cut(s) | 877, 4137, 4945 |
| BstX2I | RGATCY | 3 cut(s) | 3643, 4426, 5398 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 25, 422, 1616, 3962 |
| BstYI | RGATCY | 3 cut(s) | 3643, 4426, 5398 |
| BstZ17I | GTATAC | 1 cut(s) | 4002 |
| Bsu15I | ATCGAT | 1 cut(s) | 689 |
| BsuRI | GGCC | 5 cut(s) | 14, 381, 411, 1668, 4611 |
| BsuTUI | ATCGAT | 1 cut(s) | 689 |
| BtgI | CCRYGG | 4 cut(s) | 816, 3909, 4505, 5231 |
| BtgZI | GCGATG | 1 cut(s) | 378 |
| BtsI | GCAGTG | 3 cut(s) | 1296, 2103, 3497 |
| BveI | ACCTGC | 1 cut(s) | 224 |
| Cac8I | GCNNGC | 7 cut(s) | 85, 221, 399, 2672, 3276, 4509, 4667 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2263 |
| CfoI | GCGC | 2 cut(s) | 95, 292 |
| Cfr13I | GGNCC | 7 cut(s) | 380, 443, 613, 695, 1423, 1469, 3952 |
| Cfr42I | CCGCGG | 1 cut(s) | 4508 |
| ClaI | ATCGAT | 1 cut(s) | 689 |
| CpoI | CGGWCCG | 1 cut(s) | 443 |
| CseI | GACGC | 5 cut(s) | 218, 968, 2768, 4939, 5079 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 358, 393, 3894, 3929 |
| CspI | CGGWCCG | 1 cut(s) | 443 |
| DraI | TTTAAA | 4 cut(s) | 1852, 2541, 4399, 5289 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 4291, 5171 |
| DriI | GACNNNNNGTC | 1 cut(s) | 827 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 4291, 5171 |
| EaeI | YGGCCR | 1 cut(s) | 4609 |
| Eam1104I | CTCTTC | 2 cut(s) | 1578, 2025 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 827 |
| EarI | CTCTTC | 2 cut(s) | 1578, 2025 |
| EciI | GGCGGA | 2 cut(s) | 2919, 3812 |
| Ecl136II | GAGCTC | 1 cut(s) | 120 |
| Eco130I | CCWWGG | 4 cut(s) | 406, 816, 2968, 5231 |
| Eco147I | AGGCCT | 2 cut(s) | 14, 411 |
| Eco24I | GRGCYC | 1 cut(s) | 122 |
| Eco31I | GGTCTC | 1 cut(s) | 4837 |
| Eco32I | GATATC | 2 cut(s) | 3562, 5251 |
| Eco47I | GGWCC | 6 cut(s) | 443, 613, 695, 1423, 1469, 3952 |
| Eco53kI | GAGCTC | 1 cut(s) | 120 |
| Eco57I | CTGAAG | 9 cut(s) | 1559, 1587, 1652, 2049, 2315, 3218, 3408, 3465, 4552 |
| Eco88I | CYCGRG | 3 cut(s) | 674, 3200, 4434 |
| EcoICRI | GAGCTC | 1 cut(s) | 120 |
| EcoRV | GATATC | 2 cut(s) | 3562, 5251 |
| EcoT14I | CCWWGG | 4 cut(s) | 406, 816, 2968, 5231 |
| EcoT22I | ATGCAT | 2 cut(s) | 1980, 2340 |
| EcoT38I | GRGCYC | 1 cut(s) | 122 |
| ErhI | CCWWGG | 4 cut(s) | 406, 816, 2968, 5231 |
| Esp3I | CGTCTC | 3 cut(s) | 432, 654, 2786 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1293, 1325, 4668, 4700 |
| FaqI | GGGAC | 8 cut(s) | 216, 834, 2285, 2581, 2707, 3717, 4417, 5077 |
| FauI | CCCGC | 4 cut(s) | 98, 198, 605, 4500 |
| FbaI | TGATCA | 2 cut(s) | 2086, 3487 |
| FblI | GTMKAC | 4 cut(s) | 1719, 2429, 4001, 4283 |
| FriOI | GRGCYC | 1 cut(s) | 122 |
| GlaI | GCGC | 2 cut(s) | 94, 291 |
| GsuI | CTGGAG | 5 cut(s) | 2418, 2696, 2906, 3624, 4120 |
| HaeII | RGCGCY | 1 cut(s) | 293 |
| HaeIII | GGCC | 5 cut(s) | 14, 381, 411, 1668, 4611 |
| HapII | CCGG | 6 cut(s) | 115, 549, 1145, 1910, 2312, 4660 |
| HgaI | GACGC | 5 cut(s) | 218, 968, 2768, 4939, 5079 |
| HhaI | GCGC | 2 cut(s) | 95, 292 |
| Hin1I | GRCGYC | 1 cut(s) | 5090 |
| Hin6I | GCGC | 2 cut(s) | 93, 290 |
| HinP1I | GCGC | 2 cut(s) | 93, 290 |
| HincII | GTYRAC | 2 cut(s) | 2430, 4284 |
| HindII | GTYRAC | 2 cut(s) | 2430, 4284 |
| HindIII | AAGCTT | 3 cut(s) | 2668, 2891, 3248 |
| HpaII | CCGG | 6 cut(s) | 115, 549, 1145, 1910, 2312, 4660 |
| HphI | GGTGA | 5 cut(s) | 1042, 1097, 1558, 2495, 4424 |
| Hpy99I | CGWCG | 5 cut(s) | 229, 529, 532, 2136, 4246 |
| HpyCH4IV | ACGT | 5 cut(s) | 560, 2044, 2131, 3413, 5391 |
| HpySE526I | ACGT | 5 cut(s) | 560, 2044, 2131, 3413, 5391 |
| Hsp92I | GRCGYC | 1 cut(s) | 5090 |
| HspAI | GCGC | 2 cut(s) | 93, 290 |
| Kpn2I | TCCGGA | 2 cut(s) | 1144, 1909 |
| Ksp22I | TGATCA | 2 cut(s) | 2086, 3487 |
| KspI | CCGCGG | 1 cut(s) | 4508 |
| LguI | GCTCTTC | 2 cut(s) | 1578, 2025 |
| LmnI | GCTCC | 5 cut(s) | 106, 117, 125, 2677, 4961 |
| Lsp1109I | GCAGC | 6 cut(s) | 69, 466, 1257, 2333, 3129, 4290 |
| MaeII | ACGT | 5 cut(s) | 560, 2044, 2131, 3413, 5391 |
| MaeIII | GTNAC | 7 cut(s) | 2253, 2765, 3495, 3673, 4464, 4875, 5320 |
| MbiI | CCGCTC | 2 cut(s) | 63, 460 |
| MfeI | CAATTG | 4 cut(s) | 1436, 3220, 3333, 4359 |
| MflI | RGATCY | 3 cut(s) | 3643, 4426, 5398 |
| MhlI | GDGCHC | 5 cut(s) | 122, 3246, 3265, 3767, 5368 |
| MmeI | TCCRAC | 3 cut(s) | 1597, 2152, 5047 |
| Mph1103I | ATGCAT | 2 cut(s) | 1980, 2340 |
| MroI | TCCGGA | 2 cut(s) | 1144, 1909 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1572, 1626, 3797, 4985 |
| MslI | CAYNNNNRTG | 8 cut(s) | 23, 420, 1110, 1355, 2180, 2688, 4765, 4998 |
| MspA1I | CMGCKG | 3 cut(s) | 193, 1612, 4507 |
| MspCI | CTTAAG | 1 cut(s) | 5347 |
| MspI | CCGG | 6 cut(s) | 115, 549, 1145, 1910, 2312, 4660 |
| MunI | CAATTG | 4 cut(s) | 1436, 3220, 3333, 4359 |
| Mva1269I | GAATGC | 5 cut(s) | 85, 2338, 2391, 2571, 2885 |
| MvnI | CGCG | 5 cut(s) | 51, 93, 229, 448, 4507 |
| NcoI | CCATGG | 2 cut(s) | 816, 5231 |
| NheI | GCTAGC | 1 cut(s) | 83 |
| NlaIV | GGNNCC | 4 cut(s) | 382, 2451, 3097, 3243 |
| NmuCI | GTSAC | 3 cut(s) | 3495, 4464, 4875 |
| NsiI | ATGCAT | 2 cut(s) | 1980, 2340 |
| NspI | RCATGY | 3 cut(s) | 401, 1845, 4669 |
| NspV | TTCGAA | 1 cut(s) | 1316 |
| PaeI | GCATGC | 2 cut(s) | 401, 4669 |
| PaeR7I | CTCGAG | 2 cut(s) | 674, 3200 |
| PasI | CCCWGGG | 1 cut(s) | 4016 |
| PceI | AGGCCT | 2 cut(s) | 14, 411 |
| PciSI | GCTCTTC | 2 cut(s) | 1578, 2025 |
| PctI | GAATGC | 5 cut(s) | 85, 2338, 2391, 2571, 2885 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1572, 1626, 3797, 4985 |
| Pfl23II | CGTACG | 1 cut(s) | 561 |
| PfoI | TCCNGGA | 1 cut(s) | 1932 |
| Ppu21I | YACGTR | 2 cut(s) | 561, 3414 |
| PshAI | GACNNNNGTC | 3 cut(s) | 2277, 4873, 5124 |
| PshBI | ATTAAT | 1 cut(s) | 1776 |
| Psp124BI | GAGCTC | 1 cut(s) | 122 |
| PspLI | CGTACG | 1 cut(s) | 561 |
| PspN4I | GGNNCC | 4 cut(s) | 382, 2451, 3097, 3243 |
| PspPI | GGNCC | 7 cut(s) | 380, 443, 613, 695, 1423, 1469, 3952 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 554, 586 |
| PstI | CTGCAG | 1 cut(s) | 2110 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2263 |
| PsuI | RGATCY | 3 cut(s) | 3643, 4426, 5398 |
| PvuII | CAGCTG | 1 cut(s) | 1612 |
| RseI | CAYNNNNRTG | 8 cut(s) | 23, 420, 1110, 1355, 2180, 2688, 4765, 4998 |
| Rsr2I | CGGWCCG | 1 cut(s) | 443 |
| RsrII | CGGWCCG | 1 cut(s) | 443 |
| SacI | GAGCTC | 1 cut(s) | 122 |
| SacII | CCGCGG | 1 cut(s) | 4508 |
| SalI | GTCGAC | 2 cut(s) | 2428, 4282 |
| SapI | GCTCTTC | 2 cut(s) | 1578, 2025 |
| Sau96I | GGNCC | 7 cut(s) | 380, 443, 613, 695, 1423, 1469, 3952 |
| SduI | GDGCHC | 5 cut(s) | 122, 3246, 3265, 3767, 5368 |
| SfcI | CTRYAG | 2 cut(s) | 2106, 5356 |
| Sfr274I | CTCGAG | 2 cut(s) | 674, 3200 |
| Sfr303I | CCGCGG | 1 cut(s) | 4508 |
| SfuI | TTCGAA | 1 cut(s) | 1316 |
| SgrBI | CCGCGG | 1 cut(s) | 4508 |
| SinI | GGWCC | 6 cut(s) | 443, 613, 695, 1423, 1469, 3952 |
| SlaI | CTCGAG | 2 cut(s) | 674, 3200 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 23, 420, 1110, 1355, 2180, 2688, 4765, 4998 |
| SpeI | ACTAGT | 1 cut(s) | 2696 |
| SphI | GCATGC | 2 cut(s) | 401, 4669 |
| SseBI | AGGCCT | 2 cut(s) | 14, 411 |
| SspI | AATATT | 3 cut(s) | 1884, 4094, 5285 |
| SstI | GAGCTC | 1 cut(s) | 122 |
| StuI | AGGCCT | 2 cut(s) | 14, 411 |
| StyI | CCWWGG | 4 cut(s) | 406, 816, 2968, 5231 |
| TaiI | ACGT | 5 cut(s) | 563, 2047, 2134, 3416, 5394 |
| TauI | GCSGC | 4 cut(s) | 63, 290, 460, 3920 |
| TseFI | GTSAC | 3 cut(s) | 3495, 4464, 4875 |
| TseI | GCWGC | 6 cut(s) | 57, 454, 1245, 2346, 3117, 4303 |
| Tsp45I | GTSAC | 3 cut(s) | 3495, 4464, 4875 |
| TspGWI | ACGGA | 4 cut(s) | 142, 456, 626, 2003 |
| Vha464I | CTTAAG | 1 cut(s) | 5347 |
| VneI | GTGCAC | 1 cut(s) | 3763 |
| VpaK11BI | GGWCC | 6 cut(s) | 443, 613, 695, 1423, 1469, 3952 |
| VspI | ATTAAT | 1 cut(s) | 1776 |
| XbaI | TCTAGA | 1 cut(s) | 1496 |
| XceI | RCATGY | 3 cut(s) | 401, 1845, 4669 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 310 |
| XhoI | CTCGAG | 2 cut(s) | 674, 3200 |
| XmiI | GTMKAC | 4 cut(s) | 1719, 2429, 4001, 4283 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1572, 1626, 3797, 4985 |
| Zsp2I | ATGCAT | 2 cut(s) | 1980, 2340 |