Rmu_sc0019569.1_g000003

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019569.1
OG0000129
Physical Location & Seq
Reverse (-)
3071 .. 6056
2986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019569.1_g000003.1.cds

Sequence Viewer

Length: 2364 bp
atgctacggcttattaatctgagtggttcacaatacttgatgttgactccagacttcactgggactcctgatcttgaagagctggtgcttgaaaattgcacaagcttggtggtggttcacccgtctcttggatttctgaagaaactcttctttttgaatatgaaaaattgcaagtctattgagagccttccacctttcactagcttggaatcccttgaaaacttatggctttcactctgttcaggactgaagaagcttccagaaattgaaggaaatatgaaaagcttgctggtgcttcatttggacgggaccagcattgaggaattgcctccatcaattgaacgcttgactggtcttactatgttgaatctaacggactgtaaaaaccttttgcatcttcccaataccattgggtgcttgacatctttgaaaagtctccatctaacaggttgctccaaaattgatgagataccagggaatctgaatggtatgaaatctctggagatgcttacaattggtggaacttccgtaagggagttatctttcattgtaggcatgaagaatctacagtatctatcctgccgaggatgtaaatgtctagtttcagaatcatttaaagagatggcttcgttatcgaatttgatagggctggacttgagttattgcaatctgatggatggagcaattctcaatgatcttagcagcctaatctccttggaattgctagaattaagtgattacccaaatcaaatcaaagcattgaattcattggagtcgggcgtgaccattgtcaattccctaaattcttcagcacttggagtctcacaaagtcccacatgctttatttcaagaacaagaaatgagtggggatctgcggacctgcatgtcacatatgaggatacggaggggaaacaagtttatcatttgccagtgacatctctaaaacaaatgcctttcatttcagaattcagcgacgtacgtcctagagatgaaattccagagtggttcagcactatatcttccaggaatcccatatcaatctcgatacctcaaaatctggccaatgataacaagtggaagggatttgccacgtgtgctatattctcagccaaggggcatactgctctctccgttattgaaccggatcctgatttttctaattactcgtatcaaatcacattggaaactgatgttgtgctggaaccatatgtgttggagggaaagaccttctcctccccccatctggaattaggatcaagttctcatctgcttgtgattttctatatatctagtttgaagtttccacagcgggggttaaatcaatcaactatggtgagagctatatttgaaaccaccaatccatccatggtgatccagaaatgtggaattcgtctagtctatgaacaagatgctggatggtattccagaatagacgaggggggtgatttgatttgtctgaatgaagttgaggacgccgcctctgtattggagtctggctgggttagtgaatctgataaatgggagaaattcattccaccattggaagaagaatccacacttattctgagaaagaactttgagtctgttcttccaagatatcttgaggcactaaaccgttattctacatggtggtacaaatttaacctcagaggaagaccaggatggtttcatgagtcgtttgcctttgatacgaggtcaaatttttgcagtgtattaatcgagctgcctcaaaatctacacaagagcaagaagtggatgggatttgcaatatgcgcatcacttgtagaggaagtggggcagacagagaaaaatgacaactatcgggtacatgttgaactaagaactggggataaaggcagggagattcccgaagtgttgctcactcagacaataacatctgcaatggacttttccatcagtgatagccctcatgtaaaggttcaaaaatgtgggttccgtattgtgtaccaggaagatatacaaggatttgctgatacaatttttcggtgcatgcaaaaggaagattctcttaaatcttctcttaaatctcacaataagtttatagtagaagaatggataaagttgatacgattgcaaggtgcccatttagagagaatgacagaacgggattccagaaccccacgggaaaaatactttgaattgctctcaagaaaatatagaaattgggattggtttggcccacgttctgtttcttgtcacttcgagggagctaaaattttcaagtggaaaaggttcatgcctttcatcaaccaaggcaactctgcagaaatccaactgcctctgaatttgttcgatgatgataattggttggggtttgccgcacaaccaacatccaaacattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

787

Amino Acids

89.21

Weight (kDa)

5.55

Isoelectric Point (pI)

37.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 884
Acc16I TGCGCA 1 cut(s) 1774
Acc36I ACCTGC 1 cut(s) 888
AccB1I GGYRCC 1 cut(s) 2099
AciI CCGC 4 cut(s) 875, 1309, 1476, 2340
AclWI GGATC 5 cut(s) 877, 1139, 1152, 1261, 1366
AcoI YGGCCR 1 cut(s) 1059
AcuI CTGAAG 3 cut(s) 158, 269, 792
AcvI CACGTG 1 cut(s) 1092
AcyI GRCGYC 1 cut(s) 1473
AfaI GTAC 4 cut(s) 978, 1634, 1827, 1967
AfiI CCNNNNNNNGG 3 cut(s) 128, 1243, 1310
AflIII ACRYGT 2 cut(s) 1091, 1828
AjnI CCWGG 4 cut(s) 472, 1022, 1657, 1968
AjuI GAANNNNNNNTTGG 2 cut(s) 2173, 2205
AluBI AGCT 8 cut(s) 82, 105, 204, 256, 285, 1340, 1723, 2231
AluI AGCT 8 cut(s) 82, 105, 204, 256, 285, 1340, 1723, 2231
Alw26I GTCTC 3 cut(s) 129, 440, 826
AlwI GGATC 5 cut(s) 877, 1139, 1152, 1261, 1366
AoxI GGCC 2 cut(s) 1059, 2197
ApeKI GCWGC 2 cut(s) 702, 1723
AseI ATTAAT 2 cut(s) 15, 1715
Asp700I GAANNNNTTC 3 cut(s) 146, 2252, 2309
AspLEI GCGC 1 cut(s) 1775
AspS9I GGNCC 3 cut(s) 309, 877, 2198
AsuHPI GGTGA 4 cut(s) 110, 1345, 1381, 1454
AvaII GGWCC 2 cut(s) 309, 877
BaeGI GKGCMC 1 cut(s) 2104
BalI TGGCCA 1 cut(s) 1061
BamHI GGATCC 1 cut(s) 1144
BanI GGYRCC 1 cut(s) 2099
BbrPI CACGTG 1 cut(s) 1092
BbsI GAAGAC 1 cut(s) 1660
BbvI GCAGC 2 cut(s) 714, 1710
BceAI ACGGC 1 cut(s) 23
BciT130I CCWGG 4 cut(s) 474, 1024, 1659, 1970
BciVI GTATCC 1 cut(s) 892
BcoDI GTCTC 3 cut(s) 129, 440, 826
BfaI CTAG 6 cut(s) 201, 599, 725, 984, 1290, 1394
BfmI CTRYAG 2 cut(s) 566, 2283
BfuAI ACCTGC 1 cut(s) 888
BfuI GTATCC 1 cut(s) 892
BisI GCNGC 4 cut(s) 703, 1476, 1724, 2340
BlsI GCNGC 4 cut(s) 704, 1477, 1725, 2341
Bme1390I CCNGG 4 cut(s) 474, 1024, 1659, 1970
Bme18I GGWCC 2 cut(s) 309, 877
BmgT120I GGNCC 3 cut(s) 309, 877, 2198
BmiI GGNNCC 5 cut(s) 310, 1146, 1203, 1955, 2101
BmrFI CCNGG 4 cut(s) 474, 1024, 1659, 1970
BmrI ACTGGG 2 cut(s) 69, 1854
BmsI GCATC 4 cut(s) 403, 495, 1399, 1784
BmuI ACTGGG 2 cut(s) 69, 1854
BoxI GACNNNNGTC 2 cut(s) 788, 978
BpiI GAAGAC 1 cut(s) 1660
BplI GAGNNNNNCTC 2 cut(s) 672, 704
BpmI CTGGAG 2 cut(s) 33, 521
BpuEI CTTGAG 3 cut(s) 676, 1622, 2152
BsaAI YACGTR 1 cut(s) 1092
BsaHI GRCGYC 1 cut(s) 1473
BsaJI CCNNGG 7 cut(s) 473, 583, 714, 1110, 1365, 2141, 2272
BsaWI WCCGGW 1 cut(s) 1141
BsaXI ACNNNNNCTCC 2 cut(s) 49, 79
Bsc4I CCNNNNNNNGG 3 cut(s) 128, 1243, 1310
Bse1I ACTGG 4 cut(s) 64, 355, 929, 1849
Bse3DI GCAATG 1 cut(s) 1908
BseBI CCWGG 4 cut(s) 474, 1024, 1659, 1970
BseDI CCNNGG 7 cut(s) 473, 583, 714, 1110, 1365, 2141, 2272
BseGI GGATG 7 cut(s) 593, 682, 1361, 1421, 1667, 1761, 2351
BseLI CCNNNNNNNGG 3 cut(s) 128, 1243, 1310
BseMI GCAATG 1 cut(s) 1908
BseMII CTCAG 5 cut(s) 11, 1119, 1556, 1660, 1898
BseNI ACTGG 4 cut(s) 64, 355, 929, 1849
BseRI GAGGAG 1 cut(s) 1222
BseSI GKGCMC 1 cut(s) 2104
BseXI GCAGC 2 cut(s) 714, 1710
BseYI CCCAGC 1 cut(s) 1497
BshFI GGCC 2 cut(s) 1061, 2199
BshNI GGYRCC 1 cut(s) 2099
BsiSI CCGG 1 cut(s) 1142
BsiWI CGTACG 1 cut(s) 976
BslFI GGGAC 3 cut(s) 76, 322, 816
BslI CCNNNNNNNGG 3 cut(s) 128, 1243, 1310
BsmAI GTCTC 3 cut(s) 129, 440, 826
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 3 cut(s) 76, 322, 816
BsnI GGCC 2 cut(s) 1061, 2199
Bsp1286I GDGCHC 1 cut(s) 2104
Bsp143I GATC 6 cut(s) 70, 694, 869, 1144, 1253, 1371
Bsp19I CCATGG 1 cut(s) 1365
BspACI CCGC 4 cut(s) 875, 1309, 1476, 2340
BspANI GGCC 2 cut(s) 1061, 2199
BspCNI CTCAG 5 cut(s) 12, 1118, 1557, 1659, 1897
BspHI TCATGA 1 cut(s) 1669
BspLI GGNNCC 5 cut(s) 310, 1146, 1203, 1955, 2101
BspMAI CTGCAG 1 cut(s) 2287
BspMI ACCTGC 1 cut(s) 888
BspPI GGATC 5 cut(s) 877, 1139, 1152, 1261, 1366
BspQI GCTCTTC 1 cut(s) 72
BspT107I GGYRCC 1 cut(s) 2099
BsrDI GCAATG 1 cut(s) 1908
BsrI ACTGG 4 cut(s) 64, 355, 929, 1849
BssECI CCNNGG 7 cut(s) 473, 583, 714, 1110, 1365, 2141, 2272
BssMI GATC 6 cut(s) 70, 694, 869, 1144, 1253, 1371
BssNI GRCGYC 1 cut(s) 1473
BssT1I CCWWGG 4 cut(s) 714, 1110, 1365, 2272
Bst2UI CCWGG 4 cut(s) 474, 1024, 1659, 1970
Bst4CI ACNGT 3 cut(s) 380, 570, 1616
Bst6I CTCTTC 2 cut(s) 72, 152
BstACI GRCGYC 1 cut(s) 1473
BstBAI YACGTR 1 cut(s) 1092
BstC8I GCNNGC 2 cut(s) 287, 2012
BstDEI CTNAG 7 cut(s) 20, 698, 1105, 1565, 1646, 1838, 1884
BstDSI CCRYGG 2 cut(s) 1365, 2141
BstF5I GGATG 7 cut(s) 593, 682, 1361, 1421, 1667, 1761, 2351
BstHHI GCGC 1 cut(s) 1775
BstKTI GATC 6 cut(s) 73, 697, 872, 1147, 1256, 1374
BstMAI GTCTC 3 cut(s) 129, 440, 826
BstMBI GATC 6 cut(s) 70, 694, 869, 1144, 1253, 1371
BstMWI GCNNNNNNNGC 2 cut(s) 1094, 1772
BstNI CCWGG 4 cut(s) 474, 1024, 1659, 1970
BstNSI RCATGY 4 cut(s) 840, 887, 1832, 2014
BstPAI GACNNNNGTC 2 cut(s) 788, 978
BstSCI CCNGG 4 cut(s) 472, 1022, 1657, 1968
BstSFI CTRYAG 2 cut(s) 566, 2283
BstSLI GKGCMC 1 cut(s) 2104
BstV1I GCAGC 2 cut(s) 714, 1710
BstV2I GAAGAC 1 cut(s) 1660
BstX2I RGATCY 2 cut(s) 869, 1144
BstXI CCANNNNNNTGG 1 cut(s) 1382
BstYI RGATCY 2 cut(s) 869, 1144
BsuI GTATCC 1 cut(s) 892
BsuRI GGCC 2 cut(s) 1061, 2199
BtgI CCRYGG 2 cut(s) 1365, 2141
BtsCI GGATG 7 cut(s) 593, 682, 1361, 1421, 1667, 1761, 2351
BtsI GCAGTG 1 cut(s) 1714
BtsIMutI CAGTG 4 cut(s) 57, 936, 1714, 1924
BveI ACCTGC 1 cut(s) 888
Cac8I GCNNGC 2 cut(s) 287, 2012
CciI TCATGA 1 cut(s) 1669
CfoI GCGC 1 cut(s) 1775
Cfr13I GGNCC 3 cut(s) 309, 877, 2198
CseI GACGC 1 cut(s) 1481
Csp6I GTAC 4 cut(s) 977, 1633, 1826, 1966
CspCI CAANNNNNGTGG 2 cut(s) 90, 125
CviQI GTAC 4 cut(s) 977, 1633, 1826, 1966
DdeI CTNAG 7 cut(s) 20, 698, 1105, 1565, 1646, 1838, 1884
DpnI GATC 6 cut(s) 72, 696, 871, 1146, 1255, 1373
DpnII GATC 6 cut(s) 70, 694, 869, 1144, 1253, 1371
DraI TTTAAA 1 cut(s) 616
DrdI GACNNNNNNGTC 1 cut(s) 884
DseDI GACNNNNNNGTC 1 cut(s) 884
EaeI YGGCCR 1 cut(s) 1059
Eam1104I CTCTTC 2 cut(s) 72, 152
EarI CTCTTC 2 cut(s) 72, 152
Eco130I CCWWGG 4 cut(s) 714, 1110, 1365, 2272
Eco32I GATATC 1 cut(s) 1598
Eco47I GGWCC 2 cut(s) 309, 877
Eco57I CTGAAG 3 cut(s) 158, 269, 792
Eco72I CACGTG 1 cut(s) 1092
EcoRI GAATTC 3 cut(s) 763, 965, 1386
EcoRII CCWGG 4 cut(s) 472, 1022, 1657, 1968
EcoRV GATATC 1 cut(s) 1598
EcoT14I CCWWGG 4 cut(s) 714, 1110, 1365, 2272
ErhI CCWWGG 4 cut(s) 714, 1110, 1365, 2272
Esp3I CGTCTC 1 cut(s) 129
FalI AAGNNNNNCTT 4 cut(s) 131, 163, 2013, 2045
FaqI GGGAC 3 cut(s) 76, 322, 816
FauI CCCGC 1 cut(s) 1302
FauNDI CATATG 2 cut(s) 892, 1207
Fnu4HI GCNGC 4 cut(s) 703, 1476, 1724, 2340
FokI GGATG 7 cut(s) 600, 689, 1348, 1428, 1674, 1768, 2338
Fsp4HI GCNGC 4 cut(s) 703, 1476, 1724, 2340
FspAI RTGCGCAY 1 cut(s) 1774
FspBI CTAG 6 cut(s) 201, 599, 725, 984, 1290, 1394
FspI TGCGCA 1 cut(s) 1774
GlaI GCGC 1 cut(s) 1774
GluI GCNGC 4 cut(s) 703, 1476, 1724, 2340
GsaI CCCAGC 1 cut(s) 1501
GsuI CTGGAG 2 cut(s) 33, 521
HaeIII GGCC 2 cut(s) 1061, 2199
HapII CCGG 1 cut(s) 1142
HgaI GACGC 1 cut(s) 1481
HhaI GCGC 1 cut(s) 1775
Hin1I GRCGYC 1 cut(s) 1473
Hin6I GCGC 1 cut(s) 1773
HinP1I GCGC 1 cut(s) 1773
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HindIII AAGCTT 3 cut(s) 103, 254, 283
HpaII CCGG 1 cut(s) 1142
HphI GGTGA 4 cut(s) 110, 1345, 1381, 1454
Hpy166II GTNNAC 4 cut(s) 29, 45, 118, 1966
Hpy8I GTNNAC 4 cut(s) 29, 45, 118, 1966
Hpy99I CGWCG 1 cut(s) 977
HpyAV CCTTC 4 cut(s) 197, 263, 1072, 1237
HpyCH4III ACNGT 3 cut(s) 380, 570, 1616
HpyCH4IV ACGT 4 cut(s) 975, 979, 1091, 2203
HpyF10VI GCNNNNNNNGC 2 cut(s) 1094, 1772
HpyF3I CTNAG 7 cut(s) 20, 698, 1105, 1565, 1646, 1838, 1884
HpySE526I ACGT 4 cut(s) 975, 979, 1091, 2203
Hsp92I GRCGYC 1 cut(s) 1473
HspAI GCGC 1 cut(s) 1773
Kzo9I GATC 6 cut(s) 70, 694, 869, 1144, 1253, 1371
LguI GCTCTTC 1 cut(s) 72
LmnI GCTCC 3 cut(s) 458, 680, 2228
Lsp1109I GCAGC 2 cut(s) 714, 1710
LweI GCATC 4 cut(s) 403, 495, 1399, 1784
MaeI CTAG 6 cut(s) 201, 599, 725, 984, 1290, 1394
MaeII ACGT 4 cut(s) 975, 979, 1091, 2203
MaeIII GTNAC 4 cut(s) 781, 886, 931, 2216
MalI GATC 6 cut(s) 72, 696, 871, 1146, 1255, 1373
MboI GATC 6 cut(s) 70, 694, 869, 1144, 1253, 1371
MfeI CAATTG 2 cut(s) 336, 513
MflI RGATCY 2 cut(s) 869, 1144
MhlI GDGCHC 1 cut(s) 2104
MlsI TGGCCA 1 cut(s) 1061
MluNI TGGCCA 1 cut(s) 1061
MlyI GAGTC 7 cut(s) 40, 58, 782, 828, 1499, 1589, 1682
MmeI TCCRAC 2 cut(s) 1194, 2317
Mox20I TGGCCA 1 cut(s) 1061
MroXI GAANNNNTTC 3 cut(s) 146, 2252, 2309
MscI TGGCCA 1 cut(s) 1061
MseI TTAA 8 cut(s) 15, 615, 731, 1316, 1641, 1715, 2031, 2043
Msp20I TGGCCA 1 cut(s) 1061
MspA1I CMGCKG 1 cut(s) 1309
MspI CCGG 1 cut(s) 1142
MspR9I CCNGG 4 cut(s) 474, 1024, 1659, 1970
MunI CAATTG 2 cut(s) 336, 513
MvaI CCWGG 4 cut(s) 474, 1024, 1659, 1970
MwoI GCNNNNNNNGC 2 cut(s) 1094, 1772
NcoI CCATGG 1 cut(s) 1365
NdeI CATATG 2 cut(s) 892, 1207
NdeII GATC 6 cut(s) 70, 694, 869, 1144, 1253, 1371
NlaIV GGNNCC 5 cut(s) 310, 1146, 1203, 1955, 2101
NmeAIII GCCGAG 1 cut(s) 608
NmuCI GTSAC 4 cut(s) 781, 886, 931, 2216
NsbI TGCGCA 1 cut(s) 1774
NspI RCATGY 4 cut(s) 840, 887, 1832, 2014
PaeI GCATGC 1 cut(s) 2014
PagI TCATGA 1 cut(s) 1669
PciI ACATGT 1 cut(s) 1828
PciSI GCTCTTC 1 cut(s) 72
PdmI GAANNNNTTC 3 cut(s) 146, 2252, 2309
Pfl23II CGTACG 1 cut(s) 976
PfoI TCCNGGA 1 cut(s) 1022
PkrI GCNGC 4 cut(s) 704, 1477, 1725, 2341
PleI GAGTC 7 cut(s) 40, 58, 781, 827, 1498, 1588, 1681
PmaCI CACGTG 1 cut(s) 1092
PmlI CACGTG 1 cut(s) 1092
PpsI GAGTC 7 cut(s) 40, 58, 781, 827, 1498, 1588, 1681
Ppu21I YACGTR 1 cut(s) 1092
PscI ACATGT 1 cut(s) 1828
PshAI GACNNNNGTC 2 cut(s) 788, 978
PshBI ATTAAT 2 cut(s) 15, 1715
Psp6I CCWGG 4 cut(s) 472, 1022, 1657, 1968
PspCI CACGTG 1 cut(s) 1092
PspFI CCCAGC 1 cut(s) 1497
PspGI CCWGG 4 cut(s) 472, 1022, 1657, 1968
PspLI CGTACG 1 cut(s) 976
PspN4I GGNNCC 5 cut(s) 310, 1146, 1203, 1955, 2101
PspPI GGNCC 3 cut(s) 309, 877, 2198
PstI CTGCAG 1 cut(s) 2287
PsuI RGATCY 2 cut(s) 869, 1144
RsaI GTAC 4 cut(s) 978, 1634, 1827, 1967
RsaNI GTAC 4 cut(s) 977, 1633, 1826, 1966
SapI GCTCTTC 1 cut(s) 72
SaqAI TTAA 8 cut(s) 15, 615, 731, 1316, 1641, 1715, 2031, 2043
SatI GCNGC 4 cut(s) 703, 1476, 1724, 2340
Sau3AI GATC 6 cut(s) 70, 694, 869, 1144, 1253, 1371
Sau96I GGNCC 3 cut(s) 309, 877, 2198
SchI GAGTC 7 cut(s) 40, 58, 782, 828, 1499, 1589, 1682
ScrFI CCNGG 4 cut(s) 474, 1024, 1659, 1970
SduI GDGCHC 1 cut(s) 2104
SfaNI GCATC 4 cut(s) 403, 495, 1399, 1784
SfcI CTRYAG 2 cut(s) 566, 2283
SinI GGWCC 2 cut(s) 309, 877
SmlI CTYRAG 3 cut(s) 655, 1601, 2167
SmoI CTYRAG 3 cut(s) 655, 1601, 2167
SphI GCATGC 1 cut(s) 2014
SsiI CCGC 4 cut(s) 875, 1309, 1476, 2340
SspMI CTAG 6 cut(s) 201, 599, 725, 984, 1290, 1394
StyD4I CCNGG 4 cut(s) 472, 1022, 1657, 1968
StyI CCWWGG 4 cut(s) 714, 1110, 1365, 2272
TaaI ACNGT 3 cut(s) 380, 570, 1616
TaiI ACGT 4 cut(s) 978, 982, 1094, 2206
TaqI TCGA 5 cut(s) 635, 1043, 1719, 2223, 2313
TauI GCSGC 2 cut(s) 1478, 2342
Tru1I TTAA 8 cut(s) 15, 615, 731, 1316, 1641, 1715, 2031, 2043
Tru9I TTAA 8 cut(s) 15, 615, 731, 1316, 1641, 1715, 2031, 2043
TscAI CASTG 4 cut(s) 64, 936, 1714, 1924
TseFI GTSAC 4 cut(s) 781, 886, 931, 2216
TseI GCWGC 2 cut(s) 702, 1723
Tsp45I GTSAC 4 cut(s) 781, 886, 931, 2216
TspGWI ACGGA 5 cut(s) 389, 517, 917, 1120, 1946
TspRI CASTG 4 cut(s) 64, 936, 1714, 1924
VpaK11BI GGWCC 2 cut(s) 309, 877
VspI ATTAAT 2 cut(s) 15, 1715
XceI RCATGY 4 cut(s) 840, 887, 1832, 2014
XcmI CCANNNNNNNNNTGG 1 cut(s) 1363
XmnI GAANNNNTTC 3 cut(s) 146, 2252, 2309
XspI CTAG 6 cut(s) 201, 599, 725, 984, 1290, 1394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.