Rh7AG492300

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000129
Physical Location & Seq
Forward (+)
69268719 .. 69274220
5502 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG492300.1

Sequence Viewer

Length: 2388 bp
ATGGCATCTGCAAGATGGGCAACCACTGCAGTTCAAAGCATACTCCTCCAACGTCGAACAAAAGACGATGTGGTTCACTCAGTTAATGACTCATTCACAAATATGGACAGACTAAGATTGCTCAAAATTTGGAATGTGAAGTTTGCTGGAAACATCAATTATCTTTCTAAGAAGTTACAGTTTCTGGAATGGGACGAATGTCCTTTAGACTCTTTCCCGTCAGACTTTCAACCGGATAACCTTGTTGAACTTCAGATGCATTCAAGCTGCCACAAACAATTATGGAGAGGAAAAAAAGGATGGAGAATGCTACGGCTTATTGATATGAGTAGTTCAGAATACTTGATGTCGACTCCAGATTTCACTGAGGTTCCATTTCTTGAGATATTGGTGCTTCAAGATTGTACGAGTTCTGCAAGTAGTTCAGCACTTAGAGACTCACATGGTTTCAGTACGTGGAAATCTTCAGCAAATGCCCAACCTTCTGAGGTGCTTTTGACACATGAGCATACAGAGTGGAAACGAGTTGATCAAGTGTCACTGCCACTTCCAATGCTTATGAAAGACATTGAACTTTCTGATCCATCATCAAAACCCAGTGATATCATTTATTTTGATAATGAAATTCCAGAGTGGTTCAGCACTATATCTACCACCAATCCTATATCAATCTCTATACCTCCAGATCTGACAGATGATGACAAGTGGAAGGGGGTTACAATGTGTGCTGTTTTTGCAGTCAAGGGACATACTGTTCTCTCTGTTATTGAATCGGATTTAGAACTTTCAAACTACTTCTATCAGTGCACAATGGAAACAGATGTTTTTCGTATGAAACCATTCATCTTTGACGGGGAAGAAATCCGCCACCTTCGATCAAGTTCTCATCTGGTTTTGATTTCCTATGTAGCTAGATGGCAGTTTCCAAAGTGGGAGTTAAATCAATCAACCACGGTGGCGGCTAAATTTGAAACCAACAATCCATTCATGGAGGTCCAGAAATGTGGGATTCGTCTAGTTTATGAGCAAGATGCTGGATGGTATACCAAACTATTCCCTGGGGTTAATGCAATTTGTCTAAATGAAGTGATGGATGCTATGCTGAAAACTGGCTGGCTTAGTCAAATGGATCAATATTTGAAATGGGAGAAAATTATTCCCCCCATCGAAGAAGACTCCAGTACAGTTCTGCTAAGGAAGAACATCGAGTCTGTTCTTCCTCGATACCTTGAGGCATTGAACCATTATCCTGCAACATACAAATTTAACCTCAGAGGAAGCCCGTCGTGGTTTGAGTCCTTTTTCACTGATACAAGGTCAGGGTCGACTCTAGTGTCAATTAAGCTGCCTCAAAATCTACACAAGAGTAAGAAGTGGATGGCATTTGCAATATGTGCATCAATTGCAGAGGAACAGCAAGAGGACTATCATGTTTATTTTAAACTCAAAACGGGTGAATACAATGAGGATCTGTCCCGAGAACTTGAGTACATTGTGGCAATGTCGTCACAAGCAAATCATTATCAACTTTTGGTTGTGTACATACCGCGGGCATTGATTCCCGAAGTCTTGCTCGCTCGGACATCAACAACTGAAATGCACATTTCCTTCAGAGTCGATACTCCTGGTGCAGAAGTTCAAAGAAGTTGTGGCCGTATTGTTTACCAGGAAGATTTAGAAGGGTTTGTTGAAACAATCGTCCGGTGCATGCAAAGAGAAGATACTCTTGAACTTTATGATAAATGGGTGGTAGAAGATTGGATAGACTTGATAGGATTGCAAGGGGGTCATTTATGTACTCCATACAAATGCAAATCCATAACAGGACGGGAAAGGAAGTTTGAATTGCTCTCTCAGAAATATAGGAATCGGGACTGGGCTACGTCTCCTCCTTATATTTGCGTCTTCTTTGGAGCTGAAATTTCCAAGTGGAATTGGTTCATGCACTTCAATGAGGGAAACACTGCAAAAATCCAACTGCCTCCTAATTTGTTCTATGATGCTAATTGGATGGGGATTGCTGTATGTGGTTTATGTTGGGCGTCCCACGAAGATTCAAACATTATACTAGACGGTAGTCCTGACACAGAGTATAATGTACTCAATTTGTGTCTGGACTCTGATGTCGGTTCGGACGGCTTATTTGATGTCAAATTACAGAAACTTTTTGGGAAACTCAAGCCATGGGAATTTGAAACCGATATCACATTTTTCTTCTATATACCTCGTGTTAAATATTTAAAGTTTTGGAGACAATTCAACCTTGCCAGGGTTACTTTTTCATCTTCTAGCCCATGCTTAAGAGTCTATAGTTGTGCCCTTCGTCTAGTCTTTAAGGAGGACATTGAAGATCTCGTTCGGACACTGACGCTCTCCGAAATACCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

795

Amino Acids

92.11

Weight (kDa)

5.36

Isoelectric Point (pI)

52.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 207 - 345 3.5e-09 C-JID domain
C-JID PF20160 435 - 560 6.8e-06 C-JID domain
C-JID PF20160 645 - 783 7.4e-07 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1333, 2123
AccI GTMKAC 3 cut(s) 350, 1043, 1325
AccII CGCG 1 cut(s) 1549
AciI CCGC 4 cut(s) 865, 959, 1547, 1549
AclWI GGATC 3 cut(s) 575, 1137, 1476
AcoI YGGCCR 1 cut(s) 1651
AcsI RAATTY 6 cut(s) 126, 624, 965, 1262, 1920, 2189
AcuI CTGAAG 3 cut(s) 236, 450, 1594
AcyI GRCGYC 1 cut(s) 2042
AfaI GTAC 7 cut(s) 406, 454, 1183, 1490, 1541, 1798, 2100
AfiI CCNNNNNNNGG 1 cut(s) 2269
AflII CTTAAG 1 cut(s) 2299
AjnI CCWGG 4 cut(s) 1057, 1624, 1665, 2267
AjuI GAANNNNNNNTTGG 2 cut(s) 968, 1000
AloI GAACNNNNNNTCC 2 cut(s) 738, 770
AluBI AGCT 4 cut(s) 267, 911, 1345, 1916
AluI AGCT 4 cut(s) 267, 911, 1345, 1916
Alw21I GWGCWC 1 cut(s) 809
Alw26I GTCTC 3 cut(s) 429, 1890, 2245
Alw44I GTGCAC 1 cut(s) 805
AlwI GGATC 3 cut(s) 575, 1137, 1476
AlwNI CAGNNNCTG 1 cut(s) 184
Ama87I CYCGRG 1 cut(s) 1476
AoxI GGCC 1 cut(s) 1651
ApaLI GTGCAC 1 cut(s) 805
ApeKI GCWGC 2 cut(s) 267, 1345
ApoI RAATTY 6 cut(s) 126, 624, 965, 1262, 1920, 2189
ArsI GACNNNNNNTTYG 2 cut(s) 2126, 2158
Asp700I GAANNNNTTC 2 cut(s) 839, 1937
AspS9I GGNCC 1 cut(s) 994
AsuHPI GGTGA 1 cut(s) 1466
AvaI CYCGRG 1 cut(s) 1476
AvaII GGWCC 1 cut(s) 994
BaeGI GKGCMC 2 cut(s) 809, 2320
BauI CACGAG 1 cut(s) 2226
BbsI GAAGAC 2 cut(s) 1179, 1897
Bbv12I GWGCWC 1 cut(s) 809
BbvI GCAGC 2 cut(s) 254, 1332
BccI CCATC 9 cut(s) 9, 294, 592, 909, 1032, 1084, 1172, 1372, 2005
BceAI ACGGC 3 cut(s) 329, 1638, 2152
BciT130I CCWGG 4 cut(s) 1059, 1626, 1667, 2269
BclI TGATCA 1 cut(s) 529
BcoDI GTCTC 3 cut(s) 429, 1890, 2245
BfaI CTAG 6 cut(s) 912, 1016, 1331, 2069, 2289, 2327
BfmI CTRYAG 2 cut(s) 27, 2308
BfrI CTTAAG 1 cut(s) 2299
BglII AGATCT 2 cut(s) 685, 2350
BisI GCNGC 3 cut(s) 268, 960, 1346
BlsI GCNGC 3 cut(s) 269, 961, 1347
Bme1390I CCNGG 4 cut(s) 1059, 1626, 1667, 2269
Bme18I GGWCC 1 cut(s) 994
BmeT110I CYCGRG 1 cut(s) 1476
BmgT120I GGNCC 1 cut(s) 994
BmiI GGNNCC 1 cut(s) 372
BmrFI CCNGG 4 cut(s) 1059, 1626, 1667, 2269
BmrI ACTGGG 2 cut(s) 591, 1885
BmsI GCATC 6 cut(s) 14, 246, 1021, 1084, 1406, 1990
BmuI ACTGGG 2 cut(s) 591, 1885
BoxI GACNNNNGTC 2 cut(s) 198, 2076
BpiI GAAGAC 2 cut(s) 1179, 1897
BpmI CTGGAG 3 cut(s) 339, 666, 1162
Bpu10I CCTNAGC 1 cut(s) 1193
BpuEI CTTGAG 4 cut(s) 401, 1250, 1505, 2162
BsaAI YACGTR 1 cut(s) 456
BsaHI GRCGYC 1 cut(s) 2042
BsaJI CCNNGG 6 cut(s) 951, 1057, 1058, 1547, 2183, 2268
BsaWI WCCGGW 2 cut(s) 232, 1701
BsaXI ACNNNNNCTCC 2 cut(s) 1873, 1903
Bsc4I CCNNNNNNNGG 1 cut(s) 2269
Bse1I ACTGG 4 cut(s) 597, 1114, 1179, 1880
Bse3DI GCAATG 1 cut(s) 1506
BseBI CCWGG 4 cut(s) 1059, 1626, 1667, 2269
BseDI CCNNGG 6 cut(s) 951, 1057, 1058, 1547, 2183, 2268
BseGI GGATG 5 cut(s) 305, 1043, 1099, 1383, 2016
BseLI CCNNNNNNNGG 1 cut(s) 2269
BseMI GCAATG 1 cut(s) 1506
BseMII CTCAG 5 cut(s) 93, 357, 477, 1285, 1868
BseNI ACTGG 4 cut(s) 597, 1114, 1179, 1880
BseRI GAGGAG 2 cut(s) 35, 1878
BseSI GKGCMC 2 cut(s) 809, 2320
BseXI GCAGC 2 cut(s) 254, 1332
BsgI GTGCAG 1 cut(s) 1650
Bsh1236I CGCG 1 cut(s) 1549
BshFI GGCC 1 cut(s) 1653
BsiHKAI GWGCWC 1 cut(s) 809
BsiHKCI CYCGRG 1 cut(s) 1476
BsiSI CCGG 2 cut(s) 233, 1702
BslFI GGGAC 5 cut(s) 206, 759, 1459, 1886, 2029
BslI CCNNNNNNNGG 1 cut(s) 2269
BsmAI GTCTC 3 cut(s) 429, 1890, 2245
BsmBI CGTCTC 1 cut(s) 1890
BsmFI GGGAC 5 cut(s) 206, 759, 1459, 1886, 2029
BsmI GAATGC 2 cut(s) 259, 312
BsnI GGCC 1 cut(s) 1653
BsoBI CYCGRG 1 cut(s) 1476
Bsp1286I GDGCHC 2 cut(s) 809, 2320
Bsp1407I TGTACA 1 cut(s) 1539
Bsp143I GATC 7 cut(s) 529, 580, 685, 875, 1129, 1468, 2350
Bsp19I CCATGG 1 cut(s) 2183
BspACI CCGC 4 cut(s) 865, 959, 1547, 1549
BspANI GGCC 1 cut(s) 1653
BspCNI CTCAG 5 cut(s) 92, 358, 478, 1284, 1867
BspFNI CGCG 1 cut(s) 1549
BspLI GGNNCC 1 cut(s) 372
BspMAI CTGCAG 1 cut(s) 31
BspPI GGATC 3 cut(s) 575, 1137, 1476
BspTI CTTAAG 1 cut(s) 2299
BsrDI GCAATG 1 cut(s) 1506
BsrGI TGTACA 1 cut(s) 1539
BsrI ACTGG 4 cut(s) 597, 1114, 1179, 1880
BssECI CCNNGG 6 cut(s) 951, 1057, 1058, 1547, 2183, 2268
BssMI GATC 7 cut(s) 529, 580, 685, 875, 1129, 1468, 2350
BssNAI GTATAC 1 cut(s) 1044
BssNI GRCGYC 1 cut(s) 2042
BssSI CACGAG 1 cut(s) 2226
BssT1I CCWWGG 1 cut(s) 2183
Bst1107I GTATAC 1 cut(s) 1044
Bst2BI CACGAG 1 cut(s) 2226
Bst2UI CCWGG 4 cut(s) 1059, 1626, 1667, 2269
Bst4CI ACNGT 6 cut(s) 180, 754, 955, 1186, 2075, 2385
BstACI GRCGYC 1 cut(s) 2042
BstAFI CTTAAG 1 cut(s) 2299
BstAPI GCANNNNNTGC 3 cut(s) 26, 1394, 1403
BstAUI TGTACA 1 cut(s) 1539
BstBAI YACGTR 1 cut(s) 456
BstC8I GCNNGC 4 cut(s) 1115, 1551, 1575, 1709
BstDSI CCRYGG 3 cut(s) 951, 1547, 2183
BstF5I GGATG 5 cut(s) 305, 1043, 1099, 1383, 2016
BstFNI CGCG 1 cut(s) 1549
BstKTI GATC 7 cut(s) 532, 583, 688, 878, 1132, 1471, 2353
BstMAI GTCTC 3 cut(s) 429, 1890, 2245
BstMBI GATC 7 cut(s) 529, 580, 685, 875, 1129, 1468, 2350
BstMWI GCNNNNNNNGC 5 cut(s) 17, 26, 734, 1394, 1403
BstNI CCWGG 4 cut(s) 1059, 1626, 1667, 2269
BstNSI RCATGY 1 cut(s) 1711
BstPAI GACNNNNGTC 2 cut(s) 198, 2076
BstSCI CCNGG 4 cut(s) 1057, 1624, 1665, 2267
BstSFI CTRYAG 2 cut(s) 27, 2308
BstSLI GKGCMC 2 cut(s) 809, 2320
BstUI CGCG 1 cut(s) 1549
BstV1I GCAGC 2 cut(s) 254, 1332
BstV2I GAAGAC 2 cut(s) 1179, 1897
BstX2I RGATCY 3 cut(s) 685, 1468, 2350
BstXI CCANNNNNNTGG 1 cut(s) 1004
BstYI RGATCY 3 cut(s) 685, 1468, 2350
BstZ17I GTATAC 1 cut(s) 1044
BsuRI GGCC 1 cut(s) 1653
BtgI CCRYGG 3 cut(s) 951, 1547, 2183
BtsCI GGATG 5 cut(s) 305, 1043, 1099, 1383, 2016
BtsI GCAGTG 3 cut(s) 24, 539, 1962
BtsIMutI CAGTG 8 cut(s) 24, 363, 539, 604, 809, 1305, 1962, 2363
Cac8I GCNNGC 4 cut(s) 1115, 1551, 1575, 1709
CaiI CAGNNNCTG 1 cut(s) 184
Cfr13I GGNCC 1 cut(s) 994
Cfr42I CCGCGG 1 cut(s) 1550
CseI GACGC 3 cut(s) 1891, 2031, 2377
Csp6I GTAC 7 cut(s) 405, 453, 1182, 1489, 1540, 1797, 2099
CspCI CAANNNNNGTGG 2 cut(s) 936, 971
CviAII CATG 8 cut(s) 443, 503, 988, 1430, 1708, 1942, 2184, 2295
CviQI GTAC 7 cut(s) 405, 453, 1182, 1489, 1540, 1797, 2099
DpnI GATC 7 cut(s) 531, 582, 687, 877, 1131, 1470, 2352
DpnII GATC 7 cut(s) 529, 580, 685, 875, 1129, 1468, 2350
DraI TTTAAA 2 cut(s) 1441, 2241
DrdI GACNNNNNNGTC 2 cut(s) 1333, 2123
DseDI GACNNNNNNGTC 2 cut(s) 1333, 2123
EaeI YGGCCR 1 cut(s) 1651
EciI GGCGGA 1 cut(s) 854
Eco130I CCWWGG 1 cut(s) 2183
Eco32I GATATC 2 cut(s) 604, 2203
Eco47I GGWCC 1 cut(s) 994
Eco57I CTGAAG 3 cut(s) 236, 450, 1594
Eco88I CYCGRG 1 cut(s) 1476
EcoRII CCWGG 4 cut(s) 1057, 1624, 1665, 2267
EcoRV GATATC 2 cut(s) 604, 2203
EcoT14I CCWWGG 1 cut(s) 2183
EcoT22I ATGCAT 1 cut(s) 261
ErhI CCWWGG 1 cut(s) 2183
Esp3I CGTCTC 1 cut(s) 1890
FaeI CATG 8 cut(s) 446, 506, 991, 1433, 1711, 1945, 2187, 2298
FalI AAGNNNNNCTT 2 cut(s) 1710, 1742
FaqI GGGAC 5 cut(s) 206, 759, 1459, 1886, 2029
FatI CATG 8 cut(s) 442, 502, 987, 1429, 1707, 1941, 2183, 2294
FauI CCCGC 1 cut(s) 1542
FbaI TGATCA 1 cut(s) 529
FblI GTMKAC 3 cut(s) 350, 1043, 1325
Fnu4HI GCNGC 3 cut(s) 268, 960, 1346
FokI GGATG 5 cut(s) 312, 1050, 1106, 1390, 2023
Fsp4HI GCNGC 3 cut(s) 268, 960, 1346
FspBI CTAG 6 cut(s) 912, 1016, 1331, 2069, 2289, 2327
GluI GCNGC 3 cut(s) 268, 960, 1346
GsuI CTGGAG 3 cut(s) 339, 666, 1162
HaeIII GGCC 1 cut(s) 1653
HapII CCGG 2 cut(s) 233, 1702
HgaI GACGC 3 cut(s) 1891, 2031, 2377
Hin1I GRCGYC 1 cut(s) 2042
Hin1II CATG 8 cut(s) 446, 506, 991, 1433, 1711, 1945, 2187, 2298
HincII GTYRAC 2 cut(s) 351, 1326
HindII GTYRAC 2 cut(s) 351, 1326
HpaII CCGG 2 cut(s) 233, 1702
HphI GGTGA 1 cut(s) 1466
Hpy166II GTNNAC 7 cut(s) 76, 351, 807, 1044, 1326, 1540, 1663
Hpy8I GTNNAC 7 cut(s) 76, 351, 807, 1044, 1326, 1540, 1663
Hpy99I CGWCG 2 cut(s) 57, 1288
HpyAV CCTTC 6 cut(s) 492, 703, 881, 1618, 1673, 2330
HpyCH4III ACNGT 6 cut(s) 180, 754, 955, 1186, 2075, 2385
HpyCH4IV ACGT 3 cut(s) 52, 455, 1883
HpyF10VI GCNNNNNNNGC 5 cut(s) 17, 26, 734, 1394, 1403
HpySE526I ACGT 3 cut(s) 52, 455, 1883
Hsp92I GRCGYC 1 cut(s) 2042
Hsp92II CATG 8 cut(s) 446, 506, 991, 1433, 1711, 1945, 2187, 2298
Ksp22I TGATCA 1 cut(s) 529
KspI CCGCGG 1 cut(s) 1550
Kzo9I GATC 7 cut(s) 529, 580, 685, 875, 1129, 1468, 2350
LmnI GCTCC 1 cut(s) 1913
Lsp1109I GCAGC 2 cut(s) 254, 1332
LweI GCATC 6 cut(s) 14, 246, 1021, 1084, 1406, 1990
MaeI CTAG 6 cut(s) 912, 1016, 1331, 2069, 2289, 2327
MaeII ACGT 3 cut(s) 52, 455, 1883
MaeIII GTNAC 5 cut(s) 174, 537, 715, 1506, 2272
MalI GATC 7 cut(s) 531, 582, 687, 877, 1131, 1470, 2352
MboI GATC 7 cut(s) 529, 580, 685, 875, 1129, 1468, 2350
MfeI CAATTG 1 cut(s) 1401
MflI RGATCY 3 cut(s) 685, 1468, 2350
MhlI GDGCHC 2 cut(s) 809, 2320
MmeI TCCRAC 2 cut(s) 73, 1999
Mph1103I ATGCAT 1 cut(s) 261
MroXI GAANNNNTTC 2 cut(s) 839, 1937
MslI CAYNNNNRTG 3 cut(s) 101, 1807, 1950
MspA1I CMGCKG 1 cut(s) 1549
MspCI CTTAAG 1 cut(s) 2299
MspI CCGG 2 cut(s) 233, 1702
MspR9I CCNGG 4 cut(s) 1059, 1626, 1667, 2269
MunI CAATTG 1 cut(s) 1401
Mva1269I GAATGC 2 cut(s) 259, 312
MvaI CCWGG 4 cut(s) 1059, 1626, 1667, 2269
MvnI CGCG 1 cut(s) 1549
MwoI GCNNNNNNNGC 5 cut(s) 17, 26, 734, 1394, 1403
NcoI CCATGG 1 cut(s) 2183
NdeII GATC 7 cut(s) 529, 580, 685, 875, 1129, 1468, 2350
NlaIII CATG 8 cut(s) 446, 506, 991, 1433, 1711, 1945, 2187, 2298
NlaIV GGNNCC 1 cut(s) 372
NmuCI GTSAC 2 cut(s) 537, 1506
NsiI ATGCAT 1 cut(s) 261
NspI RCATGY 1 cut(s) 1711
PaeI GCATGC 1 cut(s) 1711
PasI CCCWGGG 1 cut(s) 1058
PctI GAATGC 2 cut(s) 259, 312
PdmI GAANNNNTTC 2 cut(s) 839, 1937
PfeI GAWTC 5 cut(s) 770, 1009, 1558, 1867, 2054
PkrI GCNGC 3 cut(s) 269, 961, 1347
Ppu21I YACGTR 1 cut(s) 456
PshAI GACNNNNGTC 2 cut(s) 198, 2076
Psp6I CCWGG 4 cut(s) 1057, 1624, 1665, 2267
PspGI CCWGG 4 cut(s) 1057, 1624, 1665, 2267
PspN4I GGNNCC 1 cut(s) 372
PspPI GGNCC 1 cut(s) 994
PstI CTGCAG 1 cut(s) 31
PstNI CAGNNNCTG 1 cut(s) 184
PsuI RGATCY 3 cut(s) 685, 1468, 2350
RsaI GTAC 7 cut(s) 406, 454, 1183, 1490, 1541, 1798, 2100
RsaNI GTAC 7 cut(s) 405, 453, 1182, 1489, 1540, 1797, 2099
RseI CAYNNNNRTG 3 cut(s) 101, 1807, 1950
SacII CCGCGG 1 cut(s) 1550
SalI GTCGAC 2 cut(s) 349, 1324
SatI GCNGC 3 cut(s) 268, 960, 1346
Sau3AI GATC 7 cut(s) 529, 580, 685, 875, 1129, 1468, 2350
Sau96I GGNCC 1 cut(s) 994
ScrFI CCNGG 4 cut(s) 1059, 1626, 1667, 2269
SduI GDGCHC 2 cut(s) 809, 2320
SfaNI GCATC 6 cut(s) 14, 246, 1021, 1084, 1406, 1990
SfcI CTRYAG 2 cut(s) 27, 2308
Sfr303I CCGCGG 1 cut(s) 1550
SgrBI CCGCGG 1 cut(s) 1550
SinI GGWCC 1 cut(s) 994
SmiMI CAYNNNNRTG 3 cut(s) 101, 1807, 1950
SmlI CTYRAG 5 cut(s) 380, 1229, 1484, 2177, 2299
SmoI CTYRAG 5 cut(s) 380, 1229, 1484, 2177, 2299
SphI GCATGC 1 cut(s) 1711
SsiI CCGC 4 cut(s) 865, 959, 1547, 1549
SspI AATATT 2 cut(s) 1136, 2237
SspMI CTAG 6 cut(s) 912, 1016, 1331, 2069, 2289, 2327
StyD4I CCNGG 4 cut(s) 1057, 1624, 1665, 2267
StyI CCWWGG 1 cut(s) 2183
TaaI ACNGT 6 cut(s) 180, 754, 955, 1186, 2075, 2385
TaiI ACGT 3 cut(s) 55, 458, 1886
TaqI TCGA 8 cut(s) 55, 350, 874, 1167, 1206, 1222, 1325, 1617
TatI WGTACW 5 cut(s) 1181, 1488, 1539, 1796, 2098
TauI GCSGC 1 cut(s) 962
TfiI GAWTC 5 cut(s) 770, 1009, 1558, 1867, 2054
TscAI CASTG 8 cut(s) 31, 370, 546, 604, 809, 1312, 1969, 2370
TseFI GTSAC 2 cut(s) 537, 1506
TseI GCWGC 2 cut(s) 267, 1345
Tsp45I GTSAC 2 cut(s) 537, 1506
TspDTI ATGAA 8 cut(s) 575, 636, 832, 848, 976, 1098, 1930, 2271
TspRI CASTG 8 cut(s) 31, 370, 546, 604, 809, 1312, 1969, 2370
Vha464I CTTAAG 1 cut(s) 2299
VneI GTGCAC 1 cut(s) 805
VpaK11BI GGWCC 1 cut(s) 994
XapI RAATTY 6 cut(s) 126, 624, 965, 1262, 1920, 2189
XceI RCATGY 1 cut(s) 1711
XmiI GTMKAC 3 cut(s) 350, 1043, 1325
XmnI GAANNNNTTC 2 cut(s) 839, 1937
XspI CTAG 6 cut(s) 912, 1016, 1331, 2069, 2289, 2327
Zsp2I ATGCAT 1 cut(s) 261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.