Rh7CG511000

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000129
Physical Location & Seq
Forward (+)
69023861 .. 69025958
2098 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG511000.1

Sequence Viewer

Length: 1704 bp
ATGACTACTATCAATTCACTCAGTTCTGCAAGTAGTTCAGCACTTAGAGACTCACATGGTTTCAGTACGTGGAAATCTTCAGCAAATGCCCAACCTTCTGAGGTGCTTTTGACACATGAGCATACAGAGTGGAAACGAGTTGATCAAGTGTCACTGCCACTTCCAATGCTTATGAAAGACATTGAACTTTCTGATCCATCATCAAAACCCAGTGATATCATTTATTTTGATAATGAAATTCCAGAGTGGTTCAGCACTATAACTACCAGCAATCCTATATCAATCTCTATACCTCCAGATCTGACAGATGATGACAAGTGGAAGGGGGTTACAATGTGTGCTGTTTTTGCAGTCAAGGGACATACTGTTCTCTCTGTTATTGAATCGGATTTAGAACTTTCAAACTACTTCTATCAGTGCACAATGGAAACAGATGTTTGTCGTATGAAACCATTCATCTTTGACGGGGAAGAAATCCGCCACCTTCGATCAAGTTCTCATCTGGTTTTGATTTCCTATGTAGCTAGATGGCAGTTTCCAAAGTGGGAGTTAAATCAATCAACCATGGTGGCGGCTAAATTTGAAACCAACAATCCATTCATGGAGGTCCAGAAATGTGGGATTCGTCTAGTTTATGAGCAAGATGCTGGATGGTATACCAAACTATTCCCTGGGGTTAATGCGATTTGTCTAAATGAAGTGATGGATGCTATGCTGAAAACTGGCTGGCTTAGTCAAGTGGATCAATATTTGAAATGGGAGAAAATTATTCCCCCCATCGAAGAAGACTCCAGTACAGTTCTGCTAAGGAAGAACATCGAGTCTGTTCTTCCTCGATACCTTGAGGCATTGAACCATTATCCTGCAACATACAAATTTAACCTCAGAGGAAGCCCAGCGTGGTTTGAGTCATTTCTCACTGATACAAGGTCAGGGTCGACTCTAGTGTCAATTAAGCTGCCTCAAAATCTACACAAGAGTAAGAAGTGGATGGCATTTGCAATATGCGCATCAATTGCAGAGGAACAGCAAGAGGACTATCATGTTTATTTTAAACTCAAAACAGGTGAATACAATGAGGATCTGTCCCGAGAACTTGAGTACATTGTGGCAATGTCGTCACAAGCAAATCGTTATCAACTTTTGGTTGTGTACATACCGCGGGCATTGATTCCCGAAGTCTTGCTCACTCGGACATCAACAACTGAAATGCACATTTCCTTCAGAGTCGATACTCCTGGTGCAGAAGTTCAAAGAAGTTGCGGCCGTATTGTTTACCAGGAAGATTTAGAAGGGTTTGTTGAAACAATCGTCCGGTGCATGCAAAGAGAAGATACTCTTGAACTTTATGATAAATGGGTGGTAGAAGATTGGATAGACTTGATAGGATTGCAAGGGGGTCATTTATGTACTCCAAACAAATGCAATTCCATAACAGGACGGGAAAGGAAGTTTGAATTGCTCTCTCAGAAATATAGAAATCGGGACTGGGCTATGTCTCCTTATATTTGCGTCTTCTTTGGAGCTGAAATTTCCAAGTGGAATTGGTTCATGCACTTCAATGAGGGAAACACTGCAAAAATCCAACTGCCTCCTAATTTGTTCTATGATGCTAATTGGATGGGGATTGCTGTATGTGGTTTATGTTGGGCGTCCCACGAAGATTCAAACATTATACCAAACAGTAGTCCTGACACAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

567

Amino Acids

65.2

Weight (kDa)

5.18

Isoelectric Point (pI)

47.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 78 - 216 3.2e-09 C-JID domain
C-JID PF20160 310 - 430 7.7e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 946
Acc16I TGCGCA 1 cut(s) 1009
AccI GTMKAC 2 cut(s) 656, 938
AccII CGCG 1 cut(s) 1162
AciI CCGC 5 cut(s) 478, 572, 1160, 1162, 1263
AclWI GGATC 3 cut(s) 188, 750, 1089
AcoI YGGCCR 1 cut(s) 1264
AcsI RAATTY 4 cut(s) 237, 578, 875, 1530
AcuI CTGAAG 2 cut(s) 63, 1207
AcyI GRCGYC 1 cut(s) 1652
AfaI GTAC 5 cut(s) 67, 796, 1103, 1154, 1411
AjnI CCWGG 3 cut(s) 670, 1237, 1278
AjuI GAANNNNNNNTTGG 2 cut(s) 581, 613
AloI GAACNNNNNNTCC 2 cut(s) 351, 383
AluBI AGCT 3 cut(s) 524, 958, 1526
AluI AGCT 3 cut(s) 524, 958, 1526
Alw21I GWGCWC 1 cut(s) 422
Alw26I GTCTC 2 cut(s) 42, 1503
Alw44I GTGCAC 1 cut(s) 418
AlwI GGATC 3 cut(s) 188, 750, 1089
Ama87I CYCGRG 1 cut(s) 1089
AoxI GGCC 1 cut(s) 1264
ApaLI GTGCAC 1 cut(s) 418
ApeKI GCWGC 1 cut(s) 958
ApoI RAATTY 4 cut(s) 237, 578, 875, 1530
Asp700I GAANNNNTTC 2 cut(s) 452, 1547
AspLEI GCGC 1 cut(s) 1010
AspS9I GGNCC 1 cut(s) 607
AsuHPI GGTGA 1 cut(s) 1079
AvaI CYCGRG 1 cut(s) 1089
AvaII GGWCC 1 cut(s) 607
BaeGI GKGCMC 1 cut(s) 422
BbsI GAAGAC 2 cut(s) 792, 1507
Bbv12I GWGCWC 1 cut(s) 422
BbvI GCAGC 1 cut(s) 945
BccI CCATC 7 cut(s) 205, 522, 645, 697, 785, 985, 1615
BceAI ACGGC 1 cut(s) 1251
BciT130I CCWGG 3 cut(s) 672, 1239, 1280
BclI TGATCA 1 cut(s) 142
BcoDI GTCTC 2 cut(s) 42, 1503
BfaI CTAG 3 cut(s) 525, 629, 944
BglII AGATCT 1 cut(s) 298
BisI GCNGC 3 cut(s) 573, 959, 1264
BlsI GCNGC 3 cut(s) 574, 960, 1265
Bme1390I CCNGG 3 cut(s) 672, 1239, 1280
Bme18I GGWCC 1 cut(s) 607
BmeT110I CYCGRG 1 cut(s) 1089
BmgT120I GGNCC 1 cut(s) 607
BmrFI CCNGG 3 cut(s) 672, 1239, 1280
BmrI ACTGGG 2 cut(s) 204, 1498
BmsI GCATC 4 cut(s) 634, 697, 1019, 1600
BmuI ACTGGG 2 cut(s) 204, 1498
BpiI GAAGAC 2 cut(s) 792, 1507
BpmI CTGGAG 2 cut(s) 279, 775
Bpu10I CCTNAGC 1 cut(s) 806
BpuEI CTTGAG 2 cut(s) 863, 1118
BsaAI YACGTR 1 cut(s) 69
BsaHI GRCGYC 1 cut(s) 1652
BsaJI CCNNGG 4 cut(s) 564, 670, 671, 1160
BsaWI WCCGGW 1 cut(s) 1314
Bse1I ACTGG 4 cut(s) 210, 727, 792, 1493
Bse3DI GCAATG 1 cut(s) 1119
BseBI CCWGG 3 cut(s) 672, 1239, 1280
BseDI CCNNGG 4 cut(s) 564, 670, 671, 1160
BseGI GGATG 4 cut(s) 656, 712, 996, 1626
BseMI GCAATG 1 cut(s) 1119
BseMII CTCAG 4 cut(s) 34, 90, 898, 1481
BseNI ACTGG 4 cut(s) 210, 727, 792, 1493
BseSI GKGCMC 1 cut(s) 422
BseX3I CGGCCG 1 cut(s) 1264
BseXI GCAGC 1 cut(s) 945
BseYI CCCAGC 1 cut(s) 895
BsgI GTGCAG 1 cut(s) 1263
Bsh1236I CGCG 1 cut(s) 1162
Bsh1285I CGRYCG 1 cut(s) 1267
BshFI GGCC 1 cut(s) 1266
BsiEI CGRYCG 1 cut(s) 1267
BsiHKAI GWGCWC 1 cut(s) 422
BsiHKCI CYCGRG 1 cut(s) 1089
BsiSI CCGG 1 cut(s) 1315
BslFI GGGAC 4 cut(s) 372, 1072, 1499, 1639
BsmAI GTCTC 2 cut(s) 42, 1503
BsmFI GGGAC 4 cut(s) 372, 1072, 1499, 1639
BsnI GGCC 1 cut(s) 1266
BsoBI CYCGRG 1 cut(s) 1089
Bsp1286I GDGCHC 1 cut(s) 422
Bsp1407I TGTACA 1 cut(s) 1152
Bsp143I GATC 6 cut(s) 142, 193, 298, 488, 742, 1081
Bsp19I CCATGG 1 cut(s) 564
BspACI CCGC 5 cut(s) 478, 572, 1160, 1162, 1263
BspANI GGCC 1 cut(s) 1266
BspCNI CTCAG 4 cut(s) 33, 91, 897, 1480
BspFNI CGCG 1 cut(s) 1162
BspPI GGATC 3 cut(s) 188, 750, 1089
BsrDI GCAATG 1 cut(s) 1119
BsrGI TGTACA 1 cut(s) 1152
BsrI ACTGG 4 cut(s) 210, 727, 792, 1493
BssECI CCNNGG 4 cut(s) 564, 670, 671, 1160
BssMI GATC 6 cut(s) 142, 193, 298, 488, 742, 1081
BssNAI GTATAC 1 cut(s) 657
BssNI GRCGYC 1 cut(s) 1652
BssT1I CCWWGG 1 cut(s) 564
Bst1107I GTATAC 1 cut(s) 657
Bst2UI CCWGG 3 cut(s) 672, 1239, 1280
Bst4CI ACNGT 4 cut(s) 367, 799, 1685, 1699
BstACI GRCGYC 1 cut(s) 1652
BstAPI GCANNNNNTGC 1 cut(s) 1016
BstAUI TGTACA 1 cut(s) 1152
BstBAI YACGTR 1 cut(s) 69
BstC8I GCNNGC 3 cut(s) 728, 1164, 1322
BstDEI CTNAG 7 cut(s) 20, 44, 99, 731, 806, 884, 1467
BstDSI CCRYGG 2 cut(s) 564, 1160
BstF5I GGATG 4 cut(s) 656, 712, 996, 1626
BstFNI CGCG 1 cut(s) 1162
BstHHI GCGC 1 cut(s) 1010
BstKTI GATC 6 cut(s) 145, 196, 301, 491, 745, 1084
BstMAI GTCTC 2 cut(s) 42, 1503
BstMBI GATC 6 cut(s) 142, 193, 298, 488, 742, 1081
BstMCI CGRYCG 1 cut(s) 1267
BstMWI GCNNNNNNNGC 3 cut(s) 347, 1007, 1016
BstNI CCWGG 3 cut(s) 672, 1239, 1280
BstNSI RCATGY 1 cut(s) 1324
BstSCI CCNGG 3 cut(s) 670, 1237, 1278
BstSLI GKGCMC 1 cut(s) 422
BstUI CGCG 1 cut(s) 1162
BstV1I GCAGC 1 cut(s) 945
BstV2I GAAGAC 2 cut(s) 792, 1507
BstX2I RGATCY 2 cut(s) 298, 1081
BstXI CCANNNNNNTGG 1 cut(s) 617
BstYI RGATCY 2 cut(s) 298, 1081
BstZ17I GTATAC 1 cut(s) 657
BstZI CGGCCG 1 cut(s) 1264
BsuRI GGCC 1 cut(s) 1266
BtgI CCRYGG 2 cut(s) 564, 1160
BtsCI GGATG 4 cut(s) 656, 712, 996, 1626
BtsI GCAGTG 2 cut(s) 152, 1572
BtsIMutI CAGTG 5 cut(s) 152, 217, 422, 918, 1572
Cac8I GCNNGC 3 cut(s) 728, 1164, 1322
CfoI GCGC 1 cut(s) 1010
Cfr13I GGNCC 1 cut(s) 607
Cfr42I CCGCGG 1 cut(s) 1163
CseI GACGC 2 cut(s) 1501, 1641
Csp6I GTAC 5 cut(s) 66, 795, 1102, 1153, 1410
CspCI CAANNNNNGTGG 2 cut(s) 549, 584
CviAII CATG 7 cut(s) 56, 116, 565, 601, 1043, 1321, 1552
CviJI RGCY 9 cut(s) 524, 575, 726, 730, 894, 958, 1266, 1493, 1526
CviKI_1 RGCY 9 cut(s) 524, 575, 726, 730, 894, 958, 1266, 1493, 1526
CviQI GTAC 5 cut(s) 66, 795, 1102, 1153, 1410
DdeI CTNAG 7 cut(s) 20, 44, 99, 731, 806, 884, 1467
DpnI GATC 6 cut(s) 144, 195, 300, 490, 744, 1083
DpnII GATC 6 cut(s) 142, 193, 298, 488, 742, 1081
DraI TTTAAA 1 cut(s) 1054
DrdI GACNNNNNNGTC 1 cut(s) 946
DseDI GACNNNNNNGTC 1 cut(s) 946
EaeI YGGCCR 1 cut(s) 1264
EagI CGGCCG 1 cut(s) 1264
EciI GGCGGA 1 cut(s) 467
EclXI CGGCCG 1 cut(s) 1264
Eco130I CCWWGG 1 cut(s) 564
Eco32I GATATC 1 cut(s) 217
Eco47I GGWCC 1 cut(s) 607
Eco52I CGGCCG 1 cut(s) 1264
Eco57I CTGAAG 2 cut(s) 63, 1207
Eco88I CYCGRG 1 cut(s) 1089
EcoRII CCWGG 3 cut(s) 670, 1237, 1278
EcoRV GATATC 1 cut(s) 217
EcoT14I CCWWGG 1 cut(s) 564
ErhI CCWWGG 1 cut(s) 564
FaeI CATG 7 cut(s) 59, 119, 568, 604, 1046, 1324, 1555
FalI AAGNNNNNCTT 2 cut(s) 1323, 1355
FaqI GGGAC 4 cut(s) 372, 1072, 1499, 1639
FatI CATG 7 cut(s) 55, 115, 564, 600, 1042, 1320, 1551
FauI CCCGC 1 cut(s) 1155
FbaI TGATCA 1 cut(s) 142
FblI GTMKAC 2 cut(s) 656, 938
Fnu4HI GCNGC 3 cut(s) 573, 959, 1264
FokI GGATG 4 cut(s) 663, 719, 1003, 1633
Fsp4HI GCNGC 3 cut(s) 573, 959, 1264
FspAI RTGCGCAY 1 cut(s) 1009
FspBI CTAG 3 cut(s) 525, 629, 944
FspI TGCGCA 1 cut(s) 1009
GlaI GCGC 1 cut(s) 1009
GluI GCNGC 3 cut(s) 573, 959, 1264
GsaI CCCAGC 1 cut(s) 899
GsuI CTGGAG 2 cut(s) 279, 775
HaeIII GGCC 1 cut(s) 1266
HapII CCGG 1 cut(s) 1315
HgaI GACGC 2 cut(s) 1501, 1641
HhaI GCGC 1 cut(s) 1010
Hin1I GRCGYC 1 cut(s) 1652
Hin1II CATG 7 cut(s) 59, 119, 568, 604, 1046, 1324, 1555
Hin6I GCGC 1 cut(s) 1008
HinP1I GCGC 1 cut(s) 1008
HincII GTYRAC 1 cut(s) 939
HindII GTYRAC 1 cut(s) 939
HpaII CCGG 1 cut(s) 1315
HphI GGTGA 1 cut(s) 1079
Hpy166II GTNNAC 5 cut(s) 420, 657, 939, 1153, 1276
Hpy188I TCNGA 8 cut(s) 100, 193, 303, 388, 887, 1194, 1226, 1470
Hpy188III TCNNGA 8 cut(s) 242, 296, 610, 1089, 1175, 1340, 1484, 1691
Hpy8I GTNNAC 5 cut(s) 420, 657, 939, 1153, 1276
HpyAV CCTTC 5 cut(s) 105, 316, 494, 1231, 1286
HpyCH4III ACNGT 4 cut(s) 367, 799, 1685, 1699
HpyCH4IV ACGT 1 cut(s) 68
HpyF10VI GCNNNNNNNGC 3 cut(s) 347, 1007, 1016
HpyF3I CTNAG 7 cut(s) 20, 44, 99, 731, 806, 884, 1467
HpySE526I ACGT 1 cut(s) 68
Hsp92I GRCGYC 1 cut(s) 1652
Hsp92II CATG 7 cut(s) 59, 119, 568, 604, 1046, 1324, 1555
HspAI GCGC 1 cut(s) 1008
Ksp22I TGATCA 1 cut(s) 142
KspI CCGCGG 1 cut(s) 1163
Kzo9I GATC 6 cut(s) 142, 193, 298, 488, 742, 1081
LmnI GCTCC 1 cut(s) 1523
Lsp1109I GCAGC 1 cut(s) 945
LweI GCATC 4 cut(s) 634, 697, 1019, 1600
MaeI CTAG 3 cut(s) 525, 629, 944
MaeII ACGT 1 cut(s) 68
MaeIII GTNAC 3 cut(s) 150, 328, 1119
MalI GATC 6 cut(s) 144, 195, 300, 490, 744, 1083
MboI GATC 6 cut(s) 142, 193, 298, 488, 742, 1081
MfeI CAATTG 1 cut(s) 1014
MflI RGATCY 2 cut(s) 298, 1081
MhlI GDGCHC 1 cut(s) 422
MlyI GAGTC 6 cut(s) 44, 782, 830, 917, 934, 1236
MmeI TCCRAC 1 cut(s) 1609
MroXI GAANNNNTTC 2 cut(s) 452, 1547
MseI TTAA 5 cut(s) 551, 678, 879, 954, 1053
MslI CAYNNNNRTG 1 cut(s) 1560
MspA1I CMGCKG 1 cut(s) 1162
MspI CCGG 1 cut(s) 1315
MspR9I CCNGG 3 cut(s) 672, 1239, 1280
MunI CAATTG 1 cut(s) 1014
MvaI CCWGG 3 cut(s) 672, 1239, 1280
MvnI CGCG 1 cut(s) 1162
MwoI GCNNNNNNNGC 3 cut(s) 347, 1007, 1016
NcoI CCATGG 1 cut(s) 564
NdeII GATC 6 cut(s) 142, 193, 298, 488, 742, 1081
NlaIII CATG 7 cut(s) 59, 119, 568, 604, 1046, 1324, 1555
NmuCI GTSAC 2 cut(s) 150, 1119
NsbI TGCGCA 1 cut(s) 1009
NspI RCATGY 1 cut(s) 1324
PaeI GCATGC 1 cut(s) 1324
PasI CCCWGGG 1 cut(s) 671
PdmI GAANNNNTTC 2 cut(s) 452, 1547
PfeI GAWTC 4 cut(s) 383, 622, 1171, 1664
PkrI GCNGC 3 cut(s) 574, 960, 1265
PleI GAGTC 6 cut(s) 44, 782, 829, 916, 934, 1235
PpsI GAGTC 6 cut(s) 44, 782, 829, 916, 934, 1235
Ppu21I YACGTR 1 cut(s) 69
Psp6I CCWGG 3 cut(s) 670, 1237, 1278
PspFI CCCAGC 1 cut(s) 895
PspGI CCWGG 3 cut(s) 670, 1237, 1278
PspPI GGNCC 1 cut(s) 607
PsuI RGATCY 2 cut(s) 298, 1081
RsaI GTAC 5 cut(s) 67, 796, 1103, 1154, 1411
RsaNI GTAC 5 cut(s) 66, 795, 1102, 1153, 1410
RseI CAYNNNNRTG 1 cut(s) 1560
SacII CCGCGG 1 cut(s) 1163
SalI GTCGAC 1 cut(s) 937
SaqAI TTAA 5 cut(s) 551, 678, 879, 954, 1053
SatI GCNGC 3 cut(s) 573, 959, 1264
Sau3AI GATC 6 cut(s) 142, 193, 298, 488, 742, 1081
Sau96I GGNCC 1 cut(s) 607
SchI GAGTC 6 cut(s) 44, 782, 830, 917, 934, 1236
ScrFI CCNGG 3 cut(s) 672, 1239, 1280
SduI GDGCHC 1 cut(s) 422
SfaNI GCATC 4 cut(s) 634, 697, 1019, 1600
Sfr303I CCGCGG 1 cut(s) 1163
SgrBI CCGCGG 1 cut(s) 1163
SinI GGWCC 1 cut(s) 607
SmiMI CAYNNNNRTG 1 cut(s) 1560
SmlI CTYRAG 2 cut(s) 842, 1097
SmoI CTYRAG 2 cut(s) 842, 1097
SphI GCATGC 1 cut(s) 1324
SsiI CCGC 5 cut(s) 478, 572, 1160, 1162, 1263
SspI AATATT 1 cut(s) 749
SspMI CTAG 3 cut(s) 525, 629, 944
StyD4I CCNGG 3 cut(s) 670, 1237, 1278
StyI CCWWGG 1 cut(s) 564
TaaI ACNGT 4 cut(s) 367, 799, 1685, 1699
TaiI ACGT 1 cut(s) 71
TaqI TCGA 6 cut(s) 487, 780, 819, 835, 938, 1230
TatI WGTACW 4 cut(s) 794, 1101, 1152, 1409
TauI GCSGC 2 cut(s) 575, 1266
TfiI GAWTC 4 cut(s) 383, 622, 1171, 1664
Tru1I TTAA 5 cut(s) 551, 678, 879, 954, 1053
Tru9I TTAA 5 cut(s) 551, 678, 879, 954, 1053
TscAI CASTG 5 cut(s) 159, 217, 422, 925, 1579
TseFI GTSAC 2 cut(s) 150, 1119
TseI GCWGC 1 cut(s) 958
Tsp45I GTSAC 2 cut(s) 150, 1119
TspDTI ATGAA 7 cut(s) 188, 249, 445, 461, 589, 711, 1540
TspRI CASTG 5 cut(s) 159, 217, 422, 925, 1579
VneI GTGCAC 1 cut(s) 418
VpaK11BI GGWCC 1 cut(s) 607
XapI RAATTY 4 cut(s) 237, 578, 875, 1530
XceI RCATGY 1 cut(s) 1324
XmiI GTMKAC 2 cut(s) 656, 938
XmnI GAANNNNTTC 2 cut(s) 452, 1547
XspI CTAG 3 cut(s) 525, 629, 944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.