Rh7BG464700

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000129
Physical Location & Seq
Forward (+)
55024804 .. 55027195
2392 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG464700.1

Sequence Viewer

Length: 2001 bp
ATGACTACTATCAATTCACTCAGTTCTGCAAGTAGTTCAGCACTTAGAGACTCACATGGTTTCAGTATGTGGAAATCTTCAGCAAATGCCCAACCTTCTGAGGTGCTTTTGACACATGAGCATACAGAGTGGAAACGAGTTGATCAAGTGTCACTGCCACTTCCAATGCTTATGAAAGACATTGAACTTTCTGATCCATCATCAAAACCCAGTGATATCATTTATTTTGATAATGAAATTCCAGAGTGGTTCAGCACTATATCTACCAGCAATCCTATATCAATCTCTATACCTCCAGATCTGACAGATGATGACAAGTGGAAGGGGGTTACAATGTGTACTGTTTTTGCAGTCAAGGGACATACTGTTCTCTCTGTTATTGAATCGGATTTAGAACTTTCAAACTACTTCTATCAGTGCACAATGGAAACAGATGTTTTTCGTATGAAACCATTCATCTTTGACGGGGAAGAAATCCGCCACCTTCGATCAAGTTCTCATCTGGTTTTGATTTCCTATGTAGCTAGATGGCAGTTTCCAAAGTGGGAGTTAAATCAATCAACCATGGTGGCGGCTAAATTTGAAACCAACAATCCATTCATGGAGGTCCAGAAATGTGGGATTCGTCTAGTTTATGAGCAAGATGCTGGATGGTATACCAAACTATTCCCTGGGGTTAATGCGATTTGTCTAAATGAAGTGATGGATGCTATGCTGAAAACTGGCTGGCTTAGTCAAGTGGATCAATATTTGAAATGGGAGAAAATTATTCCCCCCATCGAAGAAGACTCCAGTACAGTTCTGCTAAGGAAGAACATCGAGTCTGTTCTTCCTCGATACCTTGAGGCATTGAACCATTATCCTGCAACATACAAATTTAACCTCAGAGGAAGCCCAGCGTGGTTTGAGTCATTTCTCACTGATACAAGGTCAGGGTCGACTCTAGTGTCAATTAAGCTGCCTCAAAATCTACACAAGAGTAAGAAGTGGATGGCATTTGCAATATGCGCATCAATTGCAGAGGAACAGCAAGAGGACTATCATGTTTATTTTAAACTCAAAACGGGTGAATACAATGAGGATCTGTCCCGAGAACTTGAGTACATTGTGGCAATGTCTTCACAAGCAAATCGTTATCAACTTTTGGTTGTGTACATACCGCGGGCATTGATTCCCGAAGTCTTGCTCACTCGGACATCAACAACTGAAATGCACATTTCCTTCAGAGTCGATACTCCTGGTGCAGAAGTTCAAAGAAGTTGCGGCCGTATTGTTTACCAGGAAGATTTAGAAGGGTTTGTTGAAACAATCGTCCGGTGCATGCAAAGAGAAGATACTCTTGAACTTTATGATAAATGGGTGGTAGAAGATTGGATAGACTTGATAGGATTGCAAGGGGGTCATTTATGTACTCCAAACAAATGCAATTCCATAACAGGACGGGAAAGGAAGTTTGAATTGCTCTCTCAGAAATATAGAAATCGGGACTGGGCTATGTCTCCTCCTTATATTTGCGTCTTCTTTGGAGCTGAAATTTCCAAGTGGAATTGGTTCATGCACTTCAATGAGGGAAACACTGCAAAAATCCAACTGCCTCCTAATTTGTTCTATGATGCTAATTGGATGGGGATTGCTGTATGTGGTTTATGTTGGGCGTCCCACGAAGATTCAAACATTATACCAAACAGTAGTCCTGACACAGAGTATAATGTACTCAATTTGTGTCTGGACTCTGATGTCGGTTCGGACGGCTTATTTGATGTCAAATTACAGAAACTTTTTGGGAAACTCAAGCCATGGGAATTTGAAACCGATATCACATTTTTCTTTTATATACCTCGTGTTAAATATTTAAAGTTTTGGAGACAATTCAACCTTGCCAGGGTTACTTTTTCATCTTCTAGCCCATGCTTAAGAGTCTATAGCTGTGCCCTTCGTCTAGTATTTAAGGAGGATGTTGAAGATCTCGTTCGGACACTGACACTCTCCGAAATACCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

666

Amino Acids

76.94

Weight (kDa)

5.24

Isoelectric Point (pI)

47.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 78 - 216 3.5e-09 C-JID domain
C-JID PF20160 310 - 430 1e-05 C-JID domain
C-JID PF20160 516 - 654 3.5e-07 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 946, 1736
Acc16I TGCGCA 1 cut(s) 1009
AccI GTMKAC 2 cut(s) 656, 938
AccII CGCG 1 cut(s) 1162
AciI CCGC 5 cut(s) 478, 572, 1160, 1162, 1263
AclWI GGATC 3 cut(s) 188, 750, 1089
AcoI YGGCCR 1 cut(s) 1264
AcsI RAATTY 5 cut(s) 237, 578, 875, 1533, 1802
AcuI CTGAAG 2 cut(s) 63, 1207
AcyI GRCGYC 1 cut(s) 1655
AfaI GTAC 6 cut(s) 340, 796, 1103, 1154, 1411, 1713
AfiI CCNNNNNNNGG 1 cut(s) 1882
AflII CTTAAG 1 cut(s) 1912
AjnI CCWGG 4 cut(s) 670, 1237, 1278, 1880
AjuI GAANNNNNNNTTGG 2 cut(s) 581, 613
AloI GAACNNNNNNTCC 2 cut(s) 351, 383
AluBI AGCT 4 cut(s) 524, 958, 1529, 1926
AluI AGCT 4 cut(s) 524, 958, 1529, 1926
Alw21I GWGCWC 1 cut(s) 422
Alw26I GTCTC 3 cut(s) 42, 1503, 1858
Alw44I GTGCAC 1 cut(s) 418
AlwI GGATC 3 cut(s) 188, 750, 1089
Ama87I CYCGRG 1 cut(s) 1089
AoxI GGCC 1 cut(s) 1264
ApaLI GTGCAC 1 cut(s) 418
ApeKI GCWGC 1 cut(s) 958
ApoI RAATTY 5 cut(s) 237, 578, 875, 1533, 1802
ArsI GACNNNNNNTTYG 2 cut(s) 1739, 1771
Asp700I GAANNNNTTC 2 cut(s) 452, 1550
AspLEI GCGC 1 cut(s) 1010
AspS9I GGNCC 1 cut(s) 607
AsuHPI GGTGA 1 cut(s) 1079
AvaI CYCGRG 1 cut(s) 1089
AvaII GGWCC 1 cut(s) 607
BaeGI GKGCMC 2 cut(s) 422, 1933
BauI CACGAG 1 cut(s) 1839
BbsI GAAGAC 3 cut(s) 792, 1110, 1510
Bbv12I GWGCWC 1 cut(s) 422
BbvI GCAGC 1 cut(s) 945
BccI CCATC 7 cut(s) 205, 522, 645, 697, 785, 985, 1618
BceAI ACGGC 2 cut(s) 1251, 1765
BciT130I CCWGG 4 cut(s) 672, 1239, 1280, 1882
BclI TGATCA 1 cut(s) 142
BcoDI GTCTC 3 cut(s) 42, 1503, 1858
BfaI CTAG 5 cut(s) 525, 629, 944, 1902, 1940
BfmI CTRYAG 1 cut(s) 1921
BfrI CTTAAG 1 cut(s) 1912
BglII AGATCT 2 cut(s) 298, 1963
BisI GCNGC 3 cut(s) 573, 959, 1264
BlsI GCNGC 3 cut(s) 574, 960, 1265
Bme1390I CCNGG 4 cut(s) 672, 1239, 1280, 1882
Bme18I GGWCC 1 cut(s) 607
BmeT110I CYCGRG 1 cut(s) 1089
BmgT120I GGNCC 1 cut(s) 607
BmrFI CCNGG 4 cut(s) 672, 1239, 1280, 1882
BmrI ACTGGG 2 cut(s) 204, 1498
BmsI GCATC 4 cut(s) 634, 697, 1019, 1603
BmuI ACTGGG 2 cut(s) 204, 1498
BpiI GAAGAC 3 cut(s) 792, 1110, 1510
BpmI CTGGAG 2 cut(s) 279, 775
Bpu10I CCTNAGC 1 cut(s) 806
BpuEI CTTGAG 3 cut(s) 863, 1118, 1775
BsaHI GRCGYC 1 cut(s) 1655
BsaJI CCNNGG 6 cut(s) 564, 670, 671, 1160, 1796, 1881
BsaWI WCCGGW 1 cut(s) 1314
Bsc4I CCNNNNNNNGG 1 cut(s) 1882
Bse1I ACTGG 4 cut(s) 210, 727, 792, 1493
Bse3DI GCAATG 1 cut(s) 1119
BseBI CCWGG 4 cut(s) 672, 1239, 1280, 1882
BseDI CCNNGG 6 cut(s) 564, 670, 671, 1160, 1796, 1881
BseGI GGATG 5 cut(s) 656, 712, 996, 1629, 1960
BseLI CCNNNNNNNGG 1 cut(s) 1882
BseMI GCAATG 1 cut(s) 1119
BseMII CTCAG 4 cut(s) 34, 90, 898, 1481
BseNI ACTGG 4 cut(s) 210, 727, 792, 1493
BseRI GAGGAG 1 cut(s) 1491
BseSI GKGCMC 2 cut(s) 422, 1933
BseX3I CGGCCG 1 cut(s) 1264
BseXI GCAGC 1 cut(s) 945
BseYI CCCAGC 1 cut(s) 895
BsgI GTGCAG 1 cut(s) 1263
Bsh1236I CGCG 1 cut(s) 1162
Bsh1285I CGRYCG 1 cut(s) 1267
BshFI GGCC 1 cut(s) 1266
BsiEI CGRYCG 1 cut(s) 1267
BsiHKAI GWGCWC 1 cut(s) 422
BsiHKCI CYCGRG 1 cut(s) 1089
BsiSI CCGG 1 cut(s) 1315
BslFI GGGAC 4 cut(s) 372, 1072, 1499, 1642
BslI CCNNNNNNNGG 1 cut(s) 1882
BsmAI GTCTC 3 cut(s) 42, 1503, 1858
BsmFI GGGAC 4 cut(s) 372, 1072, 1499, 1642
BsnI GGCC 1 cut(s) 1266
BsoBI CYCGRG 1 cut(s) 1089
Bsp1286I GDGCHC 2 cut(s) 422, 1933
Bsp1407I TGTACA 1 cut(s) 1152
Bsp143I GATC 7 cut(s) 142, 193, 298, 488, 742, 1081, 1963
Bsp19I CCATGG 2 cut(s) 564, 1796
BspACI CCGC 5 cut(s) 478, 572, 1160, 1162, 1263
BspANI GGCC 1 cut(s) 1266
BspCNI CTCAG 4 cut(s) 33, 91, 897, 1480
BspFNI CGCG 1 cut(s) 1162
BspPI GGATC 3 cut(s) 188, 750, 1089
BspTI CTTAAG 1 cut(s) 1912
BsrDI GCAATG 1 cut(s) 1119
BsrGI TGTACA 1 cut(s) 1152
BsrI ACTGG 4 cut(s) 210, 727, 792, 1493
BssECI CCNNGG 6 cut(s) 564, 670, 671, 1160, 1796, 1881
BssMI GATC 7 cut(s) 142, 193, 298, 488, 742, 1081, 1963
BssNAI GTATAC 1 cut(s) 657
BssNI GRCGYC 1 cut(s) 1655
BssSI CACGAG 1 cut(s) 1839
BssT1I CCWWGG 2 cut(s) 564, 1796
Bst1107I GTATAC 1 cut(s) 657
Bst2BI CACGAG 1 cut(s) 1839
Bst2UI CCWGG 4 cut(s) 672, 1239, 1280, 1882
Bst4CI ACNGT 5 cut(s) 343, 367, 799, 1688, 1998
BstACI GRCGYC 1 cut(s) 1655
BstAFI CTTAAG 1 cut(s) 1912
BstAPI GCANNNNNTGC 1 cut(s) 1016
BstAUI TGTACA 1 cut(s) 1152
BstC8I GCNNGC 3 cut(s) 728, 1164, 1322
BstDEI CTNAG 7 cut(s) 20, 44, 99, 731, 806, 884, 1467
BstDSI CCRYGG 3 cut(s) 564, 1160, 1796
BstF5I GGATG 5 cut(s) 656, 712, 996, 1629, 1960
BstFNI CGCG 1 cut(s) 1162
BstHHI GCGC 1 cut(s) 1010
BstKTI GATC 7 cut(s) 145, 196, 301, 491, 745, 1084, 1966
BstMAI GTCTC 3 cut(s) 42, 1503, 1858
BstMBI GATC 7 cut(s) 142, 193, 298, 488, 742, 1081, 1963
BstMCI CGRYCG 1 cut(s) 1267
BstMWI GCNNNNNNNGC 2 cut(s) 1007, 1016
BstNI CCWGG 4 cut(s) 672, 1239, 1280, 1882
BstNSI RCATGY 1 cut(s) 1324
BstSCI CCNGG 4 cut(s) 670, 1237, 1278, 1880
BstSFI CTRYAG 1 cut(s) 1921
BstSLI GKGCMC 2 cut(s) 422, 1933
BstUI CGCG 1 cut(s) 1162
BstV1I GCAGC 1 cut(s) 945
BstV2I GAAGAC 3 cut(s) 792, 1110, 1510
BstX2I RGATCY 3 cut(s) 298, 1081, 1963
BstXI CCANNNNNNTGG 1 cut(s) 617
BstYI RGATCY 3 cut(s) 298, 1081, 1963
BstZ17I GTATAC 1 cut(s) 657
BstZI CGGCCG 1 cut(s) 1264
BsuRI GGCC 1 cut(s) 1266
BtgI CCRYGG 3 cut(s) 564, 1160, 1796
BtsCI GGATG 5 cut(s) 656, 712, 996, 1629, 1960
BtsI GCAGTG 2 cut(s) 152, 1575
BtsIMutI CAGTG 6 cut(s) 152, 217, 422, 918, 1575, 1976
Cac8I GCNNGC 3 cut(s) 728, 1164, 1322
CfoI GCGC 1 cut(s) 1010
Cfr13I GGNCC 1 cut(s) 607
Cfr42I CCGCGG 1 cut(s) 1163
CseI GACGC 2 cut(s) 1504, 1644
Csp6I GTAC 6 cut(s) 339, 795, 1102, 1153, 1410, 1712
CspCI CAANNNNNGTGG 2 cut(s) 549, 584
CviAII CATG 9 cut(s) 56, 116, 565, 601, 1043, 1321, 1555, 1797, 1908
CviQI GTAC 6 cut(s) 339, 795, 1102, 1153, 1410, 1712
DdeI CTNAG 7 cut(s) 20, 44, 99, 731, 806, 884, 1467
DpnI GATC 7 cut(s) 144, 195, 300, 490, 744, 1083, 1965
DpnII GATC 7 cut(s) 142, 193, 298, 488, 742, 1081, 1963
DraI TTTAAA 2 cut(s) 1054, 1854
DrdI GACNNNNNNGTC 2 cut(s) 946, 1736
DseDI GACNNNNNNGTC 2 cut(s) 946, 1736
EaeI YGGCCR 1 cut(s) 1264
EagI CGGCCG 1 cut(s) 1264
EciI GGCGGA 1 cut(s) 467
EclXI CGGCCG 1 cut(s) 1264
Eco130I CCWWGG 2 cut(s) 564, 1796
Eco32I GATATC 2 cut(s) 217, 1816
Eco47I GGWCC 1 cut(s) 607
Eco52I CGGCCG 1 cut(s) 1264
Eco57I CTGAAG 2 cut(s) 63, 1207
Eco88I CYCGRG 1 cut(s) 1089
EcoRII CCWGG 4 cut(s) 670, 1237, 1278, 1880
EcoRV GATATC 2 cut(s) 217, 1816
EcoT14I CCWWGG 2 cut(s) 564, 1796
ErhI CCWWGG 2 cut(s) 564, 1796
FaeI CATG 9 cut(s) 59, 119, 568, 604, 1046, 1324, 1558, 1800, 1911
FalI AAGNNNNNCTT 2 cut(s) 1323, 1355
FaqI GGGAC 4 cut(s) 372, 1072, 1499, 1642
FatI CATG 9 cut(s) 55, 115, 564, 600, 1042, 1320, 1554, 1796, 1907
FauI CCCGC 1 cut(s) 1155
FbaI TGATCA 1 cut(s) 142
FblI GTMKAC 2 cut(s) 656, 938
Fnu4HI GCNGC 3 cut(s) 573, 959, 1264
FokI GGATG 5 cut(s) 663, 719, 1003, 1636, 1967
Fsp4HI GCNGC 3 cut(s) 573, 959, 1264
FspAI RTGCGCAY 1 cut(s) 1009
FspBI CTAG 5 cut(s) 525, 629, 944, 1902, 1940
FspI TGCGCA 1 cut(s) 1009
GlaI GCGC 1 cut(s) 1009
GluI GCNGC 3 cut(s) 573, 959, 1264
GsaI CCCAGC 1 cut(s) 899
GsuI CTGGAG 2 cut(s) 279, 775
HaeIII GGCC 1 cut(s) 1266
HapII CCGG 1 cut(s) 1315
HgaI GACGC 2 cut(s) 1504, 1644
HhaI GCGC 1 cut(s) 1010
Hin1I GRCGYC 1 cut(s) 1655
Hin1II CATG 9 cut(s) 59, 119, 568, 604, 1046, 1324, 1558, 1800, 1911
Hin6I GCGC 1 cut(s) 1008
HinP1I GCGC 1 cut(s) 1008
HincII GTYRAC 1 cut(s) 939
HindII GTYRAC 1 cut(s) 939
HpaII CCGG 1 cut(s) 1315
HphI GGTGA 1 cut(s) 1079
Hpy166II GTNNAC 6 cut(s) 339, 420, 657, 939, 1153, 1276
Hpy188III TCNNGA 9 cut(s) 242, 296, 610, 1089, 1175, 1340, 1484, 1694, 1727
Hpy8I GTNNAC 6 cut(s) 339, 420, 657, 939, 1153, 1276
HpyAV CCTTC 6 cut(s) 105, 316, 494, 1231, 1286, 1943
HpyCH4III ACNGT 5 cut(s) 343, 367, 799, 1688, 1998
HpyF10VI GCNNNNNNNGC 2 cut(s) 1007, 1016
HpyF3I CTNAG 7 cut(s) 20, 44, 99, 731, 806, 884, 1467
Hsp92I GRCGYC 1 cut(s) 1655
Hsp92II CATG 9 cut(s) 59, 119, 568, 604, 1046, 1324, 1558, 1800, 1911
HspAI GCGC 1 cut(s) 1008
Ksp22I TGATCA 1 cut(s) 142
KspI CCGCGG 1 cut(s) 1163
Kzo9I GATC 7 cut(s) 142, 193, 298, 488, 742, 1081, 1963
LmnI GCTCC 1 cut(s) 1526
Lsp1109I GCAGC 1 cut(s) 945
LweI GCATC 4 cut(s) 634, 697, 1019, 1603
MaeI CTAG 5 cut(s) 525, 629, 944, 1902, 1940
MaeIII GTNAC 3 cut(s) 150, 328, 1885
MalI GATC 7 cut(s) 144, 195, 300, 490, 744, 1083, 1965
MboI GATC 7 cut(s) 142, 193, 298, 488, 742, 1081, 1963
MfeI CAATTG 1 cut(s) 1014
MflI RGATCY 3 cut(s) 298, 1081, 1963
MhlI GDGCHC 2 cut(s) 422, 1933
MlyI GAGTC 8 cut(s) 44, 782, 830, 917, 934, 1236, 1724, 1926
MmeI TCCRAC 1 cut(s) 1612
MroXI GAANNNNTTC 2 cut(s) 452, 1550
MseI TTAA 9 cut(s) 551, 678, 879, 954, 1053, 1845, 1853, 1913, 1947
MslI CAYNNNNRTG 1 cut(s) 1563
MspA1I CMGCKG 1 cut(s) 1162
MspCI CTTAAG 1 cut(s) 1912
MspI CCGG 1 cut(s) 1315
MspR9I CCNGG 4 cut(s) 672, 1239, 1280, 1882
MunI CAATTG 1 cut(s) 1014
MvaI CCWGG 4 cut(s) 672, 1239, 1280, 1882
MvnI CGCG 1 cut(s) 1162
MwoI GCNNNNNNNGC 2 cut(s) 1007, 1016
NcoI CCATGG 2 cut(s) 564, 1796
NdeII GATC 7 cut(s) 142, 193, 298, 488, 742, 1081, 1963
NlaIII CATG 9 cut(s) 59, 119, 568, 604, 1046, 1324, 1558, 1800, 1911
NmuCI GTSAC 1 cut(s) 150
NsbI TGCGCA 1 cut(s) 1009
NspI RCATGY 1 cut(s) 1324
PaeI GCATGC 1 cut(s) 1324
PasI CCCWGGG 1 cut(s) 671
PdmI GAANNNNTTC 2 cut(s) 452, 1550
PfeI GAWTC 4 cut(s) 383, 622, 1171, 1667
PkrI GCNGC 3 cut(s) 574, 960, 1265
PleI GAGTC 8 cut(s) 44, 782, 829, 916, 934, 1235, 1724, 1925
PpsI GAGTC 8 cut(s) 44, 782, 829, 916, 934, 1235, 1724, 1925
Psp6I CCWGG 4 cut(s) 670, 1237, 1278, 1880
PspFI CCCAGC 1 cut(s) 895
PspGI CCWGG 4 cut(s) 670, 1237, 1278, 1880
PspPI GGNCC 1 cut(s) 607
PsuI RGATCY 3 cut(s) 298, 1081, 1963
RsaI GTAC 6 cut(s) 340, 796, 1103, 1154, 1411, 1713
RsaNI GTAC 6 cut(s) 339, 795, 1102, 1153, 1410, 1712
RseI CAYNNNNRTG 1 cut(s) 1563
SacII CCGCGG 1 cut(s) 1163
SalI GTCGAC 1 cut(s) 937
SaqAI TTAA 9 cut(s) 551, 678, 879, 954, 1053, 1845, 1853, 1913, 1947
SatI GCNGC 3 cut(s) 573, 959, 1264
Sau3AI GATC 7 cut(s) 142, 193, 298, 488, 742, 1081, 1963
Sau96I GGNCC 1 cut(s) 607
SchI GAGTC 8 cut(s) 44, 782, 830, 917, 934, 1236, 1724, 1926
ScrFI CCNGG 4 cut(s) 672, 1239, 1280, 1882
SduI GDGCHC 2 cut(s) 422, 1933
SfaNI GCATC 4 cut(s) 634, 697, 1019, 1603
SfcI CTRYAG 1 cut(s) 1921
Sfr303I CCGCGG 1 cut(s) 1163
SgrBI CCGCGG 1 cut(s) 1163
SinI GGWCC 1 cut(s) 607
SmiMI CAYNNNNRTG 1 cut(s) 1563
SmlI CTYRAG 4 cut(s) 842, 1097, 1790, 1912
SmoI CTYRAG 4 cut(s) 842, 1097, 1790, 1912
SphI GCATGC 1 cut(s) 1324
SsiI CCGC 5 cut(s) 478, 572, 1160, 1162, 1263
SspI AATATT 2 cut(s) 749, 1850
SspMI CTAG 5 cut(s) 525, 629, 944, 1902, 1940
StyD4I CCNGG 4 cut(s) 670, 1237, 1278, 1880
StyI CCWWGG 2 cut(s) 564, 1796
TaaI ACNGT 5 cut(s) 343, 367, 799, 1688, 1998
TaqI TCGA 6 cut(s) 487, 780, 819, 835, 938, 1230
TatI WGTACW 6 cut(s) 338, 794, 1101, 1152, 1409, 1711
TauI GCSGC 2 cut(s) 575, 1266
TfiI GAWTC 4 cut(s) 383, 622, 1171, 1667
Tru1I TTAA 9 cut(s) 551, 678, 879, 954, 1053, 1845, 1853, 1913, 1947
Tru9I TTAA 9 cut(s) 551, 678, 879, 954, 1053, 1845, 1853, 1913, 1947
TscAI CASTG 6 cut(s) 159, 217, 422, 925, 1582, 1983
TseFI GTSAC 1 cut(s) 150
TseI GCWGC 1 cut(s) 958
Tsp45I GTSAC 1 cut(s) 150
TspDTI ATGAA 8 cut(s) 188, 249, 445, 461, 589, 711, 1543, 1884
TspRI CASTG 6 cut(s) 159, 217, 422, 925, 1582, 1983
Vha464I CTTAAG 1 cut(s) 1912
VneI GTGCAC 1 cut(s) 418
VpaK11BI GGWCC 1 cut(s) 607
XapI RAATTY 5 cut(s) 237, 578, 875, 1533, 1802
XceI RCATGY 1 cut(s) 1324
XmiI GTMKAC 2 cut(s) 656, 938
XmnI GAANNNNTTC 2 cut(s) 452, 1550
XspI CTAG 5 cut(s) 525, 629, 944, 1902, 1940
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.