RLG00000012997

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
24730997 .. 24736061
5065 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012997

Sequence Viewer

Length: 3153 bp
ATGGAGAGATCTCTATTAACACTATTTGGAAGACAATTGTGGATGCATGATTTGATGCAAGAATTGGGTTATGAAATTGTTCGTCGAGAATGTCATGAACAGCCCGGCAAGCGTAGCAGGTTGTGGGTTCAAGAGGATATCATCCGTGTACTGAAAAATAATGAGGGAAACACTGAAGTGGAAGGCATATTCTTGAATTTGCAACAACAACAGGAGGTTCCAATTATTAGCTGGAGCATGCTAAAGCTCATTGATCTAAGTGATTCCCAATACTTGATCAAGACCCCAAACTTTACTGAGGTTCCAAATCTCCAGACTCTAGTGCTTCAAGGCTGCACAAGATTGTCTGAGGTTCACCCATCCATTGGAGTTCTCAAAAGACTAGTTTTGTTGAATATGAAAAACTGCATATCTGTTAAGAGCCTTGCATCTTCCATCTATGGGACTGCTATAGAGGAATTACCTTCATCAATTGAATATTTGACTGGTCTCACTTTGTTGGATTTAGGGGACTGCAGACAGCTTTTGTGTCTTCCAAGTAATATTTCATGTCTGACATCTCTGAAAAGTATGATTCTTACCGGTTGTTCAGAACTTGATGCCATACCTGAGAATTTGAATTGTGTGGAATGTCTAGAGGAACTTGATATAAGTGGAACTGCAATAAGAAATTCATCGTCCCTTGTAGGCATGAAGAGCCTAAAGACTCTATCCTTTCGAGGATGCAAAGATCAGCCTTCAAAGCCATGGCACTGGCTCTTTAATTGTTGGTGGTGGGGCACAAGGGGTCATGCTTCCATGAGTCTGTTGTTGCCTACTTCATTCTCAGGTTTGACTTCTTTGACAAATCTAAACTTAAGTGATTGCAATCTGATGGACGGTGGAATTCCCGATAATCTTGTCAGCTTATTCTCCTTAAAAACGTTGAATTTAAGAGGGAATGATTTTGTTCACTTACCGGAAAGCCTTTCTCAACTCTCAAAGCTTGAATACCTCAACTTGAGCAATTGTAGTAAGCTTCAAACGCTGCCCAAGAGGCTTCCATCAACTACTCTACATGTGAGTGCAGAAAATTGTACTTCACTGACAGATTTCCCAAATCAAGTCAAGATTTTGACTTCACGAGCCAACCCGGGAAATATAACTACCATCAATTCCCTCACTTCATCCCTGTATGAAAAATATCGTACTTCAAAGTCTGAAAAACAAGAAGGTTGTACATTACCGAGGGGTGTAACACATTTACATGTGGTGGATTCATCATCTGTTCCGGGAAGTAGTATCCGGATGAGTTCCGGCCGGGAAGGGGAATGGAAGCCAGCTACTGAGATTTCAATTGAAAGACAAGTACTTCGAAAACAGCTCGAGTTATTTGATTTTAGGTCATCAGACAGTAAGATACATGCAGTTGGTCGTGATCAAACTGTAATTCCAGAGTGGTTCAGCATCATAGCTAGCAGATGTTCCATAGGACACCCGTTGATTCCAAATTTAAAAGATGGTAAGCAGTGGATGGGGGTTGCCGTGTGTGCTATTTTCTCAGTCAAGGAATTAGTACAACATCCTCCTGTCTCCGGCATTGAATCTGATCCAGAAACTTCTAACTACTTCTACCGGTGCACATTGGGAACAGCTGAATTTGATCTAGAACCATGTATCCTGTACGACGAGCTACATCGCCATGTTGTTACATCTGGATCTACTTTTGTTTGTAGTTTTTACGTCCCTTGGGTGCACTTTCCGGAGATGTTAAATGAATCATTTCTAATGGTGGCTTTATTTGACACCAACAGCCCATTCATGGAGGTCAAGAAATGTGGGATTCGTTTATTATATGAGCAAGACGTTGATGGGTTTATTGAAACAATATTGCAGTTGGATTTAGATGGTGGCCGTCAACATCTAATCCCTAATTTGCTTACTACCGGAGAAAAACCTGAAATTCCTTCCAACACCTGCGAATTAAATGAAGTTGATAAAGCTCTGTTTGAGTCGGGATGGTTTCACCTAGTAGACGATAATATTTTGAGATGGGAGAAAGTTATTCCAATTAGCGAAGAAGGCTCCATCATTATGCTAAGAAAGAACATCGAATCTGTTCTTCCAAGATACCTGGAGAGACTAAATAACGAGAAGTTTCAATACCATCATTTTGATCTAAGTGGAAGCCCAGCATGGTTCAGTCCTCAAATTGGGTTCACCGCGACAATGGACCTGCGTGATAATCTACAAAAGAGTAAGAAGAGGAGGATTCAGTGGTTCTTGTGTCTTCAAATTGGTATATTTTTTTTAAGGGAAGCCGGCATTTCTGGAAAACTATTTTCCACCCAAAAGATATCTCATGGACTCGTCCTCATTTACATACCGAAGGCAAAATTTTTGGAAGATGAATTCTCAGAAATAGGTTCAAGTAGCAAGATTTGCATTGTTTGTAAAAGCGATAACCCTGATATCGAAGTTAAAACCTGTGGGTTCCGTATTTTGTACCAGCAAGATTTACAAGGTTTTGTTCAGAGAATCACCCACTGCATATTGCGTAGTTCAGATTTCGACCATTATAATAAATTGGTGGTAGAAGATTGGATAAGTTTGATAGGATTGCAAAGCCCTAAAGTCCATTTCGAGAAAATGATACAAGAAGCTGCTCCCACCGGGACGGTCTCAAGTCAACAGAATGCAGAGAGCGTTGAAGAACTCCCTAGCCGGCGACCAGAATGGTTCACGAATTTGAACAAAGGCAGCTCTGCAGAAATCTCACTGCCTCCAAATTTGTTCGATGATGGTAACTGGTTGGGGATTTCTGTTTGCGCTTATGTCTCAGTCCAGCAATATCCGACCAATATTATTGACATTAGTACTCCAGATTCTCAGAATAGTCGTGAGCTTATTTGTTATCTGGATTATACCAATGTTGTTAGGCCACAGCAACCATTTGGTCCAATAGCCTTGACTTGGGAGTTGGGACTACAAGAATGTGCACTAAGTCTTGTATTTAAGGAGGATGTACAAGATCTTATACGGACCTTGTCCCTCTGTCACTCATCTTCAAGATGCCATCACTGTGAGCAGGCTGGTATTCATGATTCAAGAGATTTGGATTCTGCATCTATGAACTCTACTTCAAGGGTATCACGTGTTGGGCCTTCTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1051

Amino Acids

118.44

Weight (kDa)

5.61

Isoelectric Point (pI)

53.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 146 - 240 2.9e-07 Leucine-rich repeat region
LRR_14 PF23598 274 - 346 7.3e-06 Leucine-rich repeat region
C-JID PF20160 904 - 962 3.1e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2559
AarI CACCTGC 1 cut(s) 1964
Acc36I ACCTGC 3 cut(s) 108, 1964, 2223
AccB7I CCANNNNNTGG 1 cut(s) 365
AccI GTMKAC 1 cut(s) 2013
AccII CGCG 1 cut(s) 2204
AccIII TCCGGA 2 cut(s) 1284, 1741
AciI CCGC 1 cut(s) 2202
AclI AACGTT 1 cut(s) 923
AclWI GGATC 2 cut(s) 1583, 1705
AcoI YGGCCR 2 cut(s) 1297, 1891
AcuI CTGAAG 1 cut(s) 195
AcvI CACGTG 1 cut(s) 3134
AfiI CCNNNNNNNGG 7 cut(s) 365, 441, 1306, 1574, 1801, 2192, 2952
AflII CTTAAG 1 cut(s) 856
AflIII ACRYGT 3 cut(s) 1057, 1246, 3133
AgeI ACCGGT 2 cut(s) 581, 1614
AhlI ACTAGT 1 cut(s) 382
AjnI CCWGG 1 cut(s) 2112
AjuI GAANNNNNNNTTGG 4 cut(s) 529, 561, 1781, 1813
AleI CACNNNNGTG 1 cut(s) 176
AloI GAACNNNNNNTCC 2 cut(s) 1641, 1673
Alw21I GWGCWC 3 cut(s) 1622, 1737, 2980
Alw26I GTCTC 5 cut(s) 494, 1576, 2113, 2665, 2821
Alw44I GTGCAC 3 cut(s) 1618, 1733, 2976
AlwI GGATC 2 cut(s) 1583, 1705
AlwNI CAGNNNCTG 1 cut(s) 1325
Ama87I CYCGRG 2 cut(s) 1132, 1364
Aor13HI TCCGGA 2 cut(s) 1284, 1741
AoxI GGCC 4 cut(s) 1297, 1891, 2918, 3140
ApaLI GTGCAC 3 cut(s) 1618, 1733, 2976
ApeKI GCWGC 4 cut(s) 333, 1027, 2642, 2739
ArsI GACNNNNNNTTYG 2 cut(s) 1335, 1367
AsiGI ACCGGT 2 cut(s) 581, 1614
Asp700I GAANNNNTTC 3 cut(s) 78, 1761, 2097
AspLEI GCGC 1 cut(s) 2810
AspS9I GGNCC 4 cut(s) 2212, 2936, 3021, 3140
AsuC2I CCSGG 6 cut(s) 105, 1133, 1134, 1272, 1301, 2653
AsuHPI GGTGA 4 cut(s) 347, 1997, 2191, 2512
AsuII TTCGAA 1 cut(s) 1354
AsuNHI GCTAGC 1 cut(s) 1454
AvaI CYCGRG 2 cut(s) 1132, 1364
AvaII GGWCC 3 cut(s) 2212, 2936, 3021
BaeGI GKGCMC 4 cut(s) 782, 1622, 1737, 2980
BarI GAAGNNNNNNTAC 2 cut(s) 2126, 2158
BauI CACGAG 1 cut(s) 1122
BbrPI CACGTG 1 cut(s) 3134
BbsI GAAGAC 3 cut(s) 37, 524, 2261
Bbv12I GWGCWC 3 cut(s) 1622, 1737, 2980
BbvI GCAGC 4 cut(s) 320, 1014, 2629, 2751
BceAI ACGGC 2 cut(s) 1508, 1878
BciT130I CCWGG 1 cut(s) 2114
BciVI GTATCC 2 cut(s) 1292, 1667
BclI TGATCA 2 cut(s) 276, 1417
BcnI CCSGG 6 cut(s) 105, 1133, 1134, 1272, 1301, 2653
BcoDI GTCTC 5 cut(s) 494, 1576, 2113, 2665, 2821
BcuI ACTAGT 1 cut(s) 382
BfaI CTAG 8 cut(s) 320, 383, 635, 1455, 1646, 2009, 2700, 3147
BfmI CTRYAG 3 cut(s) 450, 514, 2745
BfrI CTTAAG 1 cut(s) 856
BfuAI ACCTGC 3 cut(s) 108, 1964, 2223
BfuI GTATCC 2 cut(s) 1292, 1667
BglI GCCNNNNNGGC 1 cut(s) 1036
BglII AGATCT 2 cut(s) 8, 3010
BisI GCNGC 4 cut(s) 334, 1028, 2643, 2740
BlsI GCNGC 4 cut(s) 335, 1029, 2644, 2741
BmcAI AGTACT 2 cut(s) 1350, 2857
Bme1390I CCNGG 7 cut(s) 105, 1133, 1134, 1272, 1301, 2114, 2653
Bme18I GGWCC 3 cut(s) 2212, 2936, 3021
BmeT110I CYCGRG 2 cut(s) 1132, 1364
BmgT120I GGNCC 4 cut(s) 2212, 2936, 3021, 3140
BmiI GGNNCC 4 cut(s) 219, 303, 2065, 2474
BmrFI CCNGG 7 cut(s) 105, 1133, 1134, 1272, 1301, 2114, 2653
BmsI GCATC 8 cut(s) 33, 45, 437, 589, 713, 1455, 3041, 3113
BmtI GCTAGC 1 cut(s) 1458
BpiI GAAGAC 3 cut(s) 37, 524, 2261
BpmI CTGGAG 4 cut(s) 253, 296, 2135, 2844
Bpu14I TTCGAA 1 cut(s) 1354
BpuEI CTTGAG 2 cut(s) 1021, 2647
BpuMI CCSGG 6 cut(s) 105, 1133, 1134, 1272, 1301, 2653
BsaAI YACGTR 1 cut(s) 3134
BsaBI GATNNNNATC 1 cut(s) 867
BsaI GGTCTC 2 cut(s) 494, 2665
BsaJI CCNNGG 4 cut(s) 746, 1132, 1226, 1727
BsaWI WCCGGW 6 cut(s) 581, 958, 1284, 1614, 1741, 1925
Bsc4I CCNNNNNNNGG 7 cut(s) 365, 441, 1306, 1574, 1801, 2192, 2952
Bse118I RCCGGY 4 cut(s) 581, 1614, 2300, 2703
Bse1I ACTGG 3 cut(s) 490, 758, 2792
Bse8I GATNNNNATC 1 cut(s) 867
BseAI TCCGGA 2 cut(s) 1284, 1741
BseBI CCWGG 1 cut(s) 2114
BseDI CCNNGG 4 cut(s) 746, 1132, 1226, 1727
BseJI GATNNNNATC 1 cut(s) 867
BseLI CCNNNNNNNGG 7 cut(s) 365, 441, 1306, 1574, 1801, 2192, 2952
BseMII CTCAG 9 cut(s) 288, 339, 600, 840, 1317, 1554, 2409, 2832, 2882
BseNI ACTGG 3 cut(s) 490, 758, 2792
BseRI GAGGAG 1 cut(s) 2260
BseSI GKGCMC 4 cut(s) 782, 1622, 1737, 2980
BseX3I CGGCCG 1 cut(s) 1297
BseXI GCAGC 4 cut(s) 320, 1014, 2629, 2751
BseYI CCCAGC 1 cut(s) 2170
BsgI GTGCAG 2 cut(s) 319, 1086
Bsh1236I CGCG 1 cut(s) 2204
Bsh1285I CGRYCG 1 cut(s) 1300
BshFI GGCC 4 cut(s) 1299, 1893, 2920, 3142
BshTI ACCGGT 2 cut(s) 581, 1614
BsiEI CGRYCG 1 cut(s) 1300
BsiHKAI GWGCWC 3 cut(s) 1622, 1737, 2980
BsiHKCI CYCGRG 2 cut(s) 1132, 1364
BslFI GGGAC 7 cut(s) 457, 524, 664, 1709, 2668, 2976, 3013
BslI CCNNNNNNNGG 7 cut(s) 365, 441, 1306, 1574, 1801, 2192, 2952
BsmAI GTCTC 5 cut(s) 494, 1576, 2113, 2665, 2821
BsmFI GGGAC 7 cut(s) 457, 524, 664, 1709, 2668, 2976, 3013
BsmI GAATGC 1 cut(s) 2680
BsnI GGCC 4 cut(s) 1299, 1893, 2920, 3142
Bso31I GGTCTC 2 cut(s) 494, 2665
BsoBI CYCGRG 2 cut(s) 1132, 1364
Bsp119I TTCGAA 1 cut(s) 1354
Bsp1286I GDGCHC 4 cut(s) 782, 1622, 1737, 2980
Bsp13I TCCGGA 2 cut(s) 1284, 1741
Bsp1407I TGTACA 2 cut(s) 1217, 3004
Bsp19I CCATGG 1 cut(s) 746
BspACI CCGC 1 cut(s) 2202
BspANI GGCC 4 cut(s) 1299, 1893, 2920, 3142
BspCNI CTCAG 9 cut(s) 289, 340, 601, 839, 1318, 1553, 2408, 2831, 2881
BspEI TCCGGA 2 cut(s) 1284, 1741
BspFNI CGCG 1 cut(s) 2204
BspHI TCATGA 2 cut(s) 94, 3079
BspLI GGNNCC 4 cut(s) 219, 303, 2065, 2474
BspMAI CTGCAG 2 cut(s) 518, 2749
BspMI ACCTGC 3 cut(s) 108, 1964, 2223
BspOI GCTAGC 1 cut(s) 1458
BspPI GGATC 2 cut(s) 1583, 1705
BspQI GCTCTTC 1 cut(s) 689
BspT104I TTCGAA 1 cut(s) 1354
BspTI CTTAAG 1 cut(s) 856
BspTNI GGTCTC 2 cut(s) 494, 2665
BsrFI RCCGGY 4 cut(s) 581, 1614, 2300, 2703
BsrGI TGTACA 2 cut(s) 1217, 3004
BsrI ACTGG 3 cut(s) 490, 758, 2792
BssAI RCCGGY 4 cut(s) 581, 1614, 2300, 2703
BssECI CCNNGG 4 cut(s) 746, 1132, 1226, 1727
BssSI CACGAG 1 cut(s) 1122
BssT1I CCWWGG 2 cut(s) 746, 1727
Bst2BI CACGAG 1 cut(s) 1122
Bst2UI CCWGG 1 cut(s) 2114
Bst4CI ACNGT 5 cut(s) 881, 1394, 1426, 2659, 3062
Bst6I CTCTTC 2 cut(s) 689, 2237
BstAFI CTTAAG 1 cut(s) 856
BstAPI GCANNNNNTGC 1 cut(s) 2421
BstAUI TGTACA 2 cut(s) 1217, 3004
BstBAI YACGTR 1 cut(s) 3134
BstBI TTCGAA 1 cut(s) 1354
BstC8I GCNNGC 7 cut(s) 110, 239, 1320, 1456, 2302, 2705, 3069
BstDSI CCRYGG 1 cut(s) 746
BstFNI CGCG 1 cut(s) 2204
BstHHI GCGC 1 cut(s) 2810
BstMAI GTCTC 5 cut(s) 494, 1576, 2113, 2665, 2821
BstMCI CGRYCG 1 cut(s) 1300
BstMWI GCNNNNNNNGC 9 cut(s) 109, 114, 696, 742, 1024, 1036, 1529, 2061, 2421
BstNI CCWGG 1 cut(s) 2114
BstNSI RCATGY 4 cut(s) 241, 1061, 1250, 1406
BstSCI CCNGG 7 cut(s) 103, 1131, 1132, 1270, 1299, 2112, 2651
BstSFI CTRYAG 3 cut(s) 450, 514, 2745
BstSLI GKGCMC 4 cut(s) 782, 1622, 1737, 2980
BstUI CGCG 1 cut(s) 2204
BstV1I GCAGC 4 cut(s) 320, 1014, 2629, 2751
BstV2I GAAGAC 3 cut(s) 37, 524, 2261
BstX2I RGATCY 3 cut(s) 8, 1697, 3010
BstXI CCANNNNNNTGG 1 cut(s) 753
BstYI RGATCY 3 cut(s) 8, 1697, 3010
BstZI CGGCCG 1 cut(s) 1297
BsuI GTATCC 2 cut(s) 1292, 1667
BsuRI GGCC 4 cut(s) 1299, 1893, 2920, 3142
BtgI CCRYGG 1 cut(s) 746
BtgZI GCGATG 1 cut(s) 1661
BtsI GCAGTG 3 cut(s) 1514, 2524, 2756
BtsIMutI CAGTG 8 cut(s) 171, 751, 1082, 1514, 2261, 2524, 2756, 3058
BveI ACCTGC 3 cut(s) 108, 1964, 2223
Cac8I GCNNGC 7 cut(s) 110, 239, 1320, 1456, 2302, 2705, 3069
CaiI CAGNNNCTG 1 cut(s) 1325
CciI TCATGA 2 cut(s) 94, 3079
CfoI GCGC 1 cut(s) 2810
Cfr10I RCCGGY 4 cut(s) 581, 1614, 2300, 2703
Cfr13I GGNCC 4 cut(s) 2212, 2936, 3021, 3140
Cfr9I CCCGGG 1 cut(s) 1132
CspAI ACCGGT 2 cut(s) 581, 1614
CspCI CAANNNNNGTGG 2 cut(s) 1798, 1833
DraI TTTAAA 1 cut(s) 1494
EaeI YGGCCR 2 cut(s) 1297, 1891
EagI CGGCCG 1 cut(s) 1297
Eam1104I CTCTTC 2 cut(s) 689, 2237
EarI CTCTTC 2 cut(s) 689, 2237
EclXI CGGCCG 1 cut(s) 1297
Eco130I CCWWGG 2 cut(s) 746, 1727
Eco31I GGTCTC 2 cut(s) 494, 2665
Eco32I GATATC 3 cut(s) 139, 2337, 2452
Eco47I GGWCC 3 cut(s) 2212, 2936, 3021
Eco52I CGGCCG 1 cut(s) 1297
Eco57I CTGAAG 1 cut(s) 195
Eco72I CACGTG 1 cut(s) 3134
Eco88I CYCGRG 2 cut(s) 1132, 1364
EcoRI GAATTC 2 cut(s) 885, 2390
EcoRII CCWGG 1 cut(s) 2112
EcoRV GATATC 3 cut(s) 139, 2337, 2452
EcoT14I CCWWGG 2 cut(s) 746, 1727
EcoT22I ATGCAT 1 cut(s) 48
ErhI CCWWGG 2 cut(s) 746, 1727
FaqI GGGAC 7 cut(s) 457, 524, 664, 1709, 2668, 2976, 3013
FbaI TGATCA 2 cut(s) 276, 1417
FblI GTMKAC 1 cut(s) 2013
Fnu4HI GCNGC 4 cut(s) 334, 1028, 2643, 2740
Fsp4HI GCNGC 4 cut(s) 334, 1028, 2643, 2740
FspBI CTAG 8 cut(s) 320, 383, 635, 1455, 1646, 2009, 2700, 3147
GlaI GCGC 1 cut(s) 2809
GluI GCNGC 4 cut(s) 334, 1028, 2643, 2740
GsaI CCCAGC 1 cut(s) 2174
GsuI CTGGAG 4 cut(s) 253, 296, 2135, 2844
HaeIII GGCC 4 cut(s) 1299, 1893, 2920, 3142
HhaI GCGC 1 cut(s) 2810
Hin6I GCGC 1 cut(s) 2808
HinP1I GCGC 1 cut(s) 2808
HincII GTYRAC 2 cut(s) 1898, 2669
HindII GTYRAC 2 cut(s) 1898, 2669
HindIII AAGCTT 2 cut(s) 983, 1016
HphI GGTGA 4 cut(s) 347, 1997, 2191, 2512
Hpy99I CGWCG 2 cut(s) 87, 1670
HpyAV CCTTC 9 cut(s) 176, 474, 747, 1205, 1298, 1956, 2054, 2362, 3153
HpyCH4III ACNGT 5 cut(s) 881, 1394, 1426, 2659, 3062
HpyCH4IV ACGT 4 cut(s) 923, 1722, 1845, 3133
HpyF10VI GCNNNNNNNGC 9 cut(s) 109, 114, 696, 742, 1024, 1036, 1529, 2061, 2421
HpySE526I ACGT 4 cut(s) 923, 1722, 1845, 3133
HspAI GCGC 1 cut(s) 2808
Kpn2I TCCGGA 2 cut(s) 1284, 1741
KroI GCCGGC 2 cut(s) 2300, 2703
KroNI GCCGGC 2 cut(s) 2302, 2705
Ksp22I TGATCA 2 cut(s) 276, 1417
LguI GCTCTTC 1 cut(s) 689
LmnI GCTCC 3 cut(s) 234, 2069, 2650
Lsp1109I GCAGC 4 cut(s) 320, 1014, 2629, 2751
LweI GCATC 8 cut(s) 33, 45, 437, 589, 713, 1455, 3041, 3113
MaeI CTAG 8 cut(s) 320, 383, 635, 1455, 1646, 2009, 2700, 3147
MaeII ACGT 4 cut(s) 923, 1722, 1845, 3133
MaeIII GTNAC 4 cut(s) 1234, 1687, 2783, 3035
MfeI CAATTG 4 cut(s) 35, 471, 1006, 1335
MflI RGATCY 3 cut(s) 8, 1697, 3010
MhlI GDGCHC 4 cut(s) 782, 1622, 1737, 2980
MlyI GAGTC 5 cut(s) 310, 700, 811, 2000, 2340
MmeI TCCRAC 4 cut(s) 480, 1857, 1974, 2858
Mph1103I ATGCAT 1 cut(s) 48
MroI TCCGGA 2 cut(s) 1284, 1741
MroNI GCCGGC 2 cut(s) 2300, 2703
MroXI GAANNNNTTC 3 cut(s) 78, 1761, 2097
MslI CAYNNNNRTG 6 cut(s) 176, 1062, 1245, 1680, 2072, 3060
MspA1I CMGCKG 1 cut(s) 1634
MspCI CTTAAG 1 cut(s) 856
MspR9I CCNGG 7 cut(s) 105, 1133, 1134, 1272, 1301, 2114, 2653
MunI CAATTG 4 cut(s) 35, 471, 1006, 1335
Mva1269I GAATGC 1 cut(s) 2680
MvaI CCWGG 1 cut(s) 2114
MvnI CGCG 1 cut(s) 2204
MwoI GCNNNNNNNGC 9 cut(s) 109, 114, 696, 742, 1024, 1036, 1529, 2061, 2421
NaeI GCCGGC 2 cut(s) 2302, 2705
NciI CCSGG 6 cut(s) 105, 1133, 1134, 1272, 1301, 2653
NcoI CCATGG 1 cut(s) 746
NgoMIV GCCGGC 2 cut(s) 2300, 2703
NheI GCTAGC 1 cut(s) 1454
NlaIV GGNNCC 4 cut(s) 219, 303, 2065, 2474
NmuCI GTSAC 1 cut(s) 3035
NsiI ATGCAT 1 cut(s) 48
NspI RCATGY 4 cut(s) 241, 1061, 1250, 1406
NspV TTCGAA 1 cut(s) 1354
OliI CACNNNNGTG 1 cut(s) 176
PaeI GCATGC 1 cut(s) 241
PaeR7I CTCGAG 1 cut(s) 1364
PagI TCATGA 2 cut(s) 94, 3079
PaqCI CACCTGC 1 cut(s) 1964
PciI ACATGT 2 cut(s) 1057, 1246
PciSI GCTCTTC 1 cut(s) 689
PctI GAATGC 1 cut(s) 2680
PdiI GCCGGC 2 cut(s) 2302, 2705
PdmI GAANNNNTTC 3 cut(s) 78, 1761, 2097
PflFI GACNNNGTC 1 cut(s) 3025
PflMI CCANNNNNTGG 1 cut(s) 365
PfoI TCCNGGA 1 cut(s) 1270
PinAI ACCGGT 2 cut(s) 581, 1614
PkrI GCNGC 4 cut(s) 335, 1029, 2644, 2741
PleI GAGTC 5 cut(s) 310, 700, 810, 1999, 2340
PmaCI CACGTG 1 cut(s) 3134
PmlI CACGTG 1 cut(s) 3134
PpsI GAGTC 5 cut(s) 310, 700, 810, 1999, 2340
Ppu21I YACGTR 1 cut(s) 3134
PscI ACATGT 2 cut(s) 1057, 1246
PsiI TTATAA 1 cut(s) 2559
Psp1406I AACGTT 1 cut(s) 923
Psp6I CCWGG 1 cut(s) 2112
PspCI CACGTG 1 cut(s) 3134
PspFI CCCAGC 1 cut(s) 2170
PspGI CCWGG 1 cut(s) 2112
PspN4I GGNNCC 4 cut(s) 219, 303, 2065, 2474
PspPI GGNCC 4 cut(s) 2212, 2936, 3021, 3140
PspXI VCTCGAGB 1 cut(s) 1364
PstI CTGCAG 2 cut(s) 518, 2749
PstNI CAGNNNCTG 1 cut(s) 1325
PsuI RGATCY 3 cut(s) 8, 1697, 3010
PsyI GACNNNGTC 1 cut(s) 3025
PvuII CAGCTG 1 cut(s) 1634
RseI CAYNNNNRTG 6 cut(s) 176, 1062, 1245, 1680, 2072, 3060
SapI GCTCTTC 1 cut(s) 689
SatI GCNGC 4 cut(s) 334, 1028, 2643, 2740
Sau96I GGNCC 4 cut(s) 2212, 2936, 3021, 3140
ScaI AGTACT 2 cut(s) 1350, 2857
SchI GAGTC 5 cut(s) 310, 700, 811, 2000, 2340
ScrFI CCNGG 7 cut(s) 105, 1133, 1134, 1272, 1301, 2114, 2653
SduI GDGCHC 4 cut(s) 782, 1622, 1737, 2980
SfaNI GCATC 8 cut(s) 33, 45, 437, 589, 713, 1455, 3041, 3113
SfcI CTRYAG 3 cut(s) 450, 514, 2745
Sfr274I CTCGAG 1 cut(s) 1364
SfuI TTCGAA 1 cut(s) 1354
SinI GGWCC 3 cut(s) 2212, 2936, 3021
SlaI CTCGAG 1 cut(s) 1364
SmaI CCCGGG 1 cut(s) 1134
SmiMI CAYNNNNRTG 6 cut(s) 176, 1062, 1245, 1680, 2072, 3060
SmlI CTYRAG 4 cut(s) 856, 1000, 1364, 2662
SmoI CTYRAG 4 cut(s) 856, 1000, 1364, 2662
SpeI ACTAGT 1 cut(s) 382
SphI GCATGC 1 cut(s) 241
SsiI CCGC 1 cut(s) 2202
SspI AATATT 5 cut(s) 479, 544, 1869, 2023, 2842
SspMI CTAG 8 cut(s) 320, 383, 635, 1455, 1646, 2009, 2700, 3147
StyD4I CCNGG 7 cut(s) 103, 1131, 1132, 1270, 1299, 2112, 2651
StyI CCWWGG 2 cut(s) 746, 1727
TaaI ACNGT 5 cut(s) 881, 1394, 1426, 2659, 3062
TaiI ACGT 4 cut(s) 926, 1725, 1848, 3136
TaqI TCGA 9 cut(s) 85, 718, 1354, 1365, 2091, 2454, 2550, 2622, 2775
TatI WGTACW 7 cut(s) 148, 1076, 1217, 1348, 1555, 2855, 3004
TscAI CASTG 8 cut(s) 178, 758, 1089, 1514, 2261, 2531, 2763, 3065
TseFI GTSAC 1 cut(s) 3035
TseI GCWGC 4 cut(s) 333, 1027, 2642, 2739
Tsp45I GTSAC 1 cut(s) 3035
TspGWI ACGGA 3 cut(s) 134, 2465, 3034
TspMI CCCGGG 1 cut(s) 1132
TspRI CASTG 8 cut(s) 178, 758, 1089, 1514, 2261, 2531, 2763, 3065
Tth111I GACNNNGTC 1 cut(s) 3025
Van91I CCANNNNNTGG 1 cut(s) 365
Vha464I CTTAAG 1 cut(s) 856
VneI GTGCAC 3 cut(s) 1618, 1733, 2976
VpaK11BI GGWCC 3 cut(s) 2212, 2936, 3021
XbaI TCTAGA 2 cut(s) 634, 1645
XceI RCATGY 4 cut(s) 241, 1061, 1250, 1406
XcmI CCANNNNNNNNNTGG 1 cut(s) 228
XhoI CTCGAG 1 cut(s) 1364
XmaI CCCGGG 1 cut(s) 1132
XmiI GTMKAC 1 cut(s) 2013
XmnI GAANNNNTTC 3 cut(s) 78, 1761, 2097
XspI CTAG 8 cut(s) 320, 383, 635, 1455, 1646, 2009, 2700, 3147
ZrmI AGTACT 2 cut(s) 1350, 2857
Zsp2I ATGCAT 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.