Rmu_sc0005071.1_g000006

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005071.1
Physical Location & Seq
Forward (+)
19003 .. 25251
6249 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005071.1_g000006.1.cds

Sequence Viewer

Length: 4425 bp
atgggtggtatcggaaaaactactattgcacaagtgctttttgaaagggtaaaagctcagtttgcaggtgatagctttcttgagaatgttaaagaagaaactgaaaagaagcaaggtagtacaattcatttacaagagaaacttctattgaacttgctgaatagtaatgtcaatgtgcagaacactaaaacgggaaaagacataattaagcatagactatctgctaaaagagtgcttgttgttcttgatgatgtggatcaagataaacaattggaaacattgtgtgatcgtacttggtttggtccagggagtagaatcatcataacatccagagatgaacacttgatcagtgcatttggagcagataaagtatacaaggtgaatgcattaactgatcctgaagcttttgagctctttagtttgaaagcctttaaggaagacaaggttggagaagattttctcaagctatcaaaggaatttttgaaatatgccaatggccttccattagctattgaagttttgggatcgtctgttcgtggtagaagtgtaaagttatggtcaagtgcattgaagagacttaaaaagaatcctcaaaaagggattattgatgttcttaaagttagttttgatgaattagaagaaagagaaaagaaaacgtttttggacatcgcgtgtttctttaaaggagtgaacaaggatcgtgtaataagaatactaaatggttgtgacgatgacggtgtggacctggatgtacaagttcttatggacaaatctttggtaactctatttggaacaaaattgtggatgcatgatttgatacaagaaatgggttgggaagttgttcgtcaagaatgccgtgaagaacctggaaaacgtagcaggttgtggcttctcgatgaaatcatccatgtacttggtcgaagtaaggcgacgagtgcagttcaaagcatattcctctcatgtctaacaaaagacgatgttgtccactcaattgataatgctttctcagatatggacagactgagattgctcaagatttggaatgtgaagttttccggaaacatcagatatctttctaatgagttacagtatcttgattggcatgagtgccctttggattcttttccatcagatttccaaccagagaaacttgttgaacttcacatgtgtattagcagcatcaaacaactatggagggaaaaaaaaggatggagcatgctacggcttattaatctgtggggttcacaatacttgatgtcaactccagacttcactgaggttcctgatcttgaagtgttagtgcttcaaaattgcacaagcttggtggaggttcacccgtctcttggatttctgaagaaacttcgctatttggatatgataaattgcaagtctattgagagccttccacctttcactagcttggaatcccttgaaaaattatggctttcactctgttcaggactgaagaagtttccagaaattgaaggaaatatgaaaagcttgctggagcttcatttggatgggaccagcattgaggaattgcctccatcaattgaacgcttgactggtctaaccatgttgaatctgaaagattgtaaaaaccttttgcatcttcccaataccattggctgcttgacatctttgaaaagtctctatctaacaggttgctccaaaattgatcagatacctgagaatctgaatggtataaaatgtctggagaagctttgcattggtggaacttccataagggagttatctttcattgtaggcatgaagaatctacagtatctatcctgtcgaggatgtaaatgtatagtttcagaatcatgcaaaggtctggcttcgttaccgcatttgatagagctagacttgagttattgcaatctgatggatggagcaattctcaatgattttagcagcctaatctccttaagaaggctagatttaagtggtaattgctttgtgcgattacctgaaagtatctctcaactctcaaagctcgaggctctgtacttgaataattgtagacagcttcaattggtgcccaagaagcttccgtttagtcttcaaaacgtgtatgcagaagaatgtacttcactgacggattacccaaatcaaatcatagtattggtttcaccggagtcaggagtgactactgtcgattccctcaattcttcagcacttggagtcccacaaagttccagaatgtcggctttttcaacaactgaggggggatctttagagctgcatgtggcatataagcatacagaggggaaacatgttgatctttgtccagccgcaaatcgagcgtttgtagaacaaacaacttcctggtcaaaattcgcttctgtacttcctagagatgaaattccagagtggttcagcactatatctaccagaaatcccatatcaatctcgatacctcaaaatctggccgatgataacgagtggaggggatttgccgcgtgtgttatattctcagccaaggggcatactgatatctcccttattgaaccggatcctgattttcttaattactcgtatcaaatcacattggaaactgatgttgtgcaactggaaccatttgtgttcgaggggtatgaagcactccaccgctttggatcaagttctcatatgcttatgattttctataaatcaagtggggagattccacagtgggggttaaatgaatcaactgtggtgagagctatatttgaaaccaccaatccatccatggtggtccagaaatgtggaatccgtctagtctatgagcaagatgctggatggtatcccagaataatctacgggcatggtccgatttggctgaatgatgttgaggacgatgtctctgatgttgaggacgacgcctccgtattggagtctggctggcttggtcagtctttggaatgggagaaattcattccacccttggaagaagaatccacactcgtgcggagaaagaacctcgagtctgttcttccaagataccttgaggcactacacagtgattctaaaatgttcaaatttaacctcaaagagagcccagggtggtttgagttgtttgtccctaatatgaggtcaaatttgatagaagagtcaatcgagctgcctcaaaatctacacaagagcaagaagtggatgggatttgcaatatgcgcatcacttgtagaggaagtggggcagcagacaatgaaagaggacaactattgggtatctgttacactatcaacaggggataaatttggtatgggtgtgtcccgagtacttaagcacgtcaggccattgtcagaagaacatcatcaactattggttatttacataccgcgagcacagattcccgaagtgttgctcactcagacattaataactgcaatggacttttgtatcatgatcagtgatagcgctcatgtaaaggttcaaacatgtgggtcacgtattgtgtaccaggaagatatattagggtttgccaatacaattatccggtgtatccagagggaagattcacttgaatttcatgataagttagtgatagaagaatggataaagttgatacgattgcaaggtctccatatagagggaatgaaagaacgggattccagaaccccacgggaaaaatacattgatttgtactcacgaaaatatagaaattgggaatggtctgaccctcgtcctgtttgttgtgccttcgagagcgttgaaatctccaagctgaaatggttcatgcctttcatcaaccaaggcaactctgtagaaattcaactgcctctgaatgtgttcgatgatgataattggttggggtttgccgtatgttctcagttgtcccacgagcaatatccacacattagtcttggcaatagtactcttgattcagagagagttgtgcttagttatcgtctggactctgatgttgcttggcacggcttatttgatttcctgatgcatgaagatattaatgtactcgagccatcctatgcgactcggttcctttatataccgcgcactgaagttcttaggctgggcattttagcccagaagcccgaaagcccgatctggccagtcaggaaccggccttgcactccacttcatccaatattgtggtctacccctaagaccttgaacagtcactacaaaaaagaattcaaattgccacggcgttgtgccgtcgaggaaagtgaaattgccgtcgcaaaagaccaatggcgacggctaggcgacggcaattgcgccgatgtcgttgagggcgtcgccattggtatttgcgacggcaattgcgccgtcgcaagcttaatagcgaaggcaaaccttgccatcgcaagaattttgctactgaaaaatgtcgtagcaaatatccatggcgacgccatcgaccactaccaaagctttgcgacggcaattttgccatcgcaaaagtttatttatgaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1474

Amino Acids

167.44

Weight (kDa)

5.59

Isoelectric Point (pI)

43.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 56
AasI GACNNNNNNGTC 1 cut(s) 980
Acc16I TGCGCA 1 cut(s) 3157
Acc36I ACCTGC 2 cut(s) 56, 870
AccB1I GGYRCC 1 cut(s) 2041
AccI GTMKAC 3 cut(s) 372, 2026, 4100
AccII CGCG 4 cut(s) 671, 2465, 3325, 3997
AccIII TCCGGA 1 cut(s) 1055
AciI CCGC 7 cut(s) 1850, 2298, 2463, 2614, 2953, 3323, 3995
AclI AACGTT 1 cut(s) 656
AclWI GGATC 8 cut(s) 264, 389, 532, 705, 2242, 2513, 2526, 2629
AcoI YGGCCR 2 cut(s) 2433, 4052
AcuI CTGAAG 5 cut(s) 420, 1373, 1484, 2160, 4023
AcyI GRCGYC 3 cut(s) 2865, 4242, 4359
AfeI AGCGCT 1 cut(s) 3403
AfiI CCNNNNNNNGG 6 cut(s) 596, 1343, 1935, 2144, 2678, 3574
AflII CTTAAG 2 cut(s) 1930, 3266
AflIII ACRYGT 4 cut(s) 1164, 2073, 2278, 3422
AjiI CACGTC 1 cut(s) 3274
AjnI CCWGG 6 cut(s) 304, 744, 865, 2330, 3043, 3444
AjuI GAANNNNNNNTTGG 4 cut(s) 429, 461, 644, 676
AleI CACNNNNGTG 1 cut(s) 2948
AloI GAACNNNNNNTCC 2 cut(s) 516, 548
Alw21I GWGCWC 2 cut(s) 414, 3331
Alw26I GTCTC 5 cut(s) 568, 1344, 1655, 2851, 3569
AlwI GGATC 8 cut(s) 264, 389, 532, 705, 2242, 2513, 2526, 2629
Ama87I CYCGRG 4 cut(s) 2000, 2966, 3258, 3959
Aor13HI TCCGGA 1 cut(s) 1055
Aor51HI AGCGCT 1 cut(s) 3403
AoxI GGCC 5 cut(s) 496, 2433, 3278, 4052, 4067
ApeKI GCWGC 6 cut(s) 1176, 1629, 1917, 2245, 3106, 3181
ArsI GACNNNNNNTTYG 2 cut(s) 4378, 4410
AseI ATTAAT 3 cut(s) 1230, 3362, 3951
Asp700I GAANNNNTTC 4 cut(s) 456, 840, 3716, 3773
AspLEI GCGC 5 cut(s) 3158, 3404, 3999, 4226, 4274
AspS9I GGNCC 5 cut(s) 302, 742, 1524, 2740, 2813
AsuHPI GGTGA 5 cut(s) 80, 391, 1325, 2127, 2713
AvaI CYCGRG 4 cut(s) 2000, 2966, 3258, 3959
AvaII GGWCC 5 cut(s) 302, 742, 1524, 2740, 2813
BaeGI GKGCMC 2 cut(s) 1112, 2046
BaeI ACNNNNGTAYC 2 cut(s) 3367, 3400
BalI TGGCCA 1 cut(s) 4054
BamHI GGATCC 1 cut(s) 2518
BanI GGYRCC 1 cut(s) 2041
BanII GRGCYC 2 cut(s) 414, 3044
BauI CACGAG 2 cut(s) 2948, 3824
BbsI GAAGAC 2 cut(s) 444, 2057
Bbv12I GWGCWC 2 cut(s) 414, 3331
BbvI GCAGC 6 cut(s) 1188, 1616, 1929, 2232, 3093, 3193
BciT130I CCWGG 6 cut(s) 306, 746, 867, 2332, 3045, 3446
BciVI GTATCC 2 cut(s) 2799, 3497
BclI TGATCA 3 cut(s) 345, 1678, 3390
BcoDI GTCTC 5 cut(s) 568, 1344, 1655, 2851, 3569
BfaI CTAG 6 cut(s) 1416, 1865, 1940, 2358, 2762, 4208
BfmI CTRYAG 2 cut(s) 1781, 3747
BfoI RGCGCY 1 cut(s) 3405
BfrI CTTAAG 2 cut(s) 1930, 3266
BfuAI ACCTGC 2 cut(s) 56, 870
BfuI GTATCC 2 cut(s) 2799, 3497
BisI GCNGC 8 cut(s) 1177, 1630, 1918, 2246, 2298, 2463, 3107, 3182
BlsI GCNGC 8 cut(s) 1178, 1631, 1919, 2247, 2299, 2464, 3108, 3183
BmcAI AGTACT 2 cut(s) 3264, 3859
Bme1390I CCNGG 6 cut(s) 306, 746, 867, 2332, 3045, 3446
Bme18I GGWCC 5 cut(s) 302, 742, 1524, 2740, 2813
BmeT110I CYCGRG 4 cut(s) 2000, 2966, 3258, 3959
BmgBI CACGTC 1 cut(s) 3274
BmgT120I GGNCC 5 cut(s) 302, 742, 1524, 2740, 2813
BmiI GGNNCC 7 cut(s) 1281, 1525, 2043, 2520, 2580, 3983, 4064
BmrFI CCNGG 6 cut(s) 306, 746, 867, 2332, 3045, 3446
BmsI GCATC 6 cut(s) 795, 1188, 1618, 2767, 3167, 3927
BoxI GACNNNNGTC 2 cut(s) 2156, 3666
BpiI GAAGAC 2 cut(s) 444, 2057
BplI GAGNNNNNCTC 2 cut(s) 1887, 1919
BpmI CTGGAG 3 cut(s) 1248, 1526, 1736
BpuEI CTTGAG 5 cut(s) 101, 446, 1016, 1891, 3011
BsaAI YACGTR 1 cut(s) 3434
BsaBI GATNNNNATC 1 cut(s) 255
BsaHI GRCGYC 3 cut(s) 2865, 4242, 4359
BsaI GGTCTC 1 cut(s) 3569
BsaWI WCCGGW 4 cut(s) 1055, 2137, 2515, 3480
BsaXI ACNNNNNCTCC 2 cut(s) 2852, 2882
Bsc4I CCNNNNNNNGG 6 cut(s) 596, 1343, 1935, 2144, 2678, 3574
Bse118I RCCGGY 1 cut(s) 4065
Bse1I ACTGG 3 cut(s) 1570, 2580, 4055
Bse3DI GCAATG 1 cut(s) 3378
Bse8I GATNNNNATC 1 cut(s) 255
BseAI TCCGGA 1 cut(s) 1055
BseBI CCWGG 6 cut(s) 306, 746, 867, 2332, 3045, 3446
BseJI GATNNNNATC 1 cut(s) 255
BseLI CCNNNNNNNGG 6 cut(s) 596, 1343, 1935, 2144, 2678, 3574
BseMI GCAATG 1 cut(s) 3378
BseMII CTCAG 9 cut(s) 71, 1013, 1020, 1266, 1680, 2217, 2493, 3368, 3827
BseNI ACTGG 3 cut(s) 1570, 2580, 4055
BseSI GKGCMC 2 cut(s) 1112, 2046
BseXI GCAGC 6 cut(s) 1188, 1616, 1929, 2232, 3093, 3193
BseYI CCCAGC 1 cut(s) 4015
BsgI GTGCAG 2 cut(s) 197, 957
Bsh1236I CGCG 4 cut(s) 671, 2465, 3325, 3997
BshFI GGCC 5 cut(s) 498, 2435, 3280, 4054, 4069
BshNI GGYRCC 1 cut(s) 2041
BsiHKAI GWGCWC 2 cut(s) 414, 3331
BsiHKCI CYCGRG 4 cut(s) 2000, 2966, 3258, 3959
BsiSI CCGG 5 cut(s) 1056, 2138, 2516, 3481, 4066
BslFI GGGAC 5 cut(s) 1537, 2174, 3050, 3241, 3805
BslI CCNNNNNNNGG 6 cut(s) 596, 1343, 1935, 2144, 2678, 3574
BsmAI GTCTC 5 cut(s) 568, 1344, 1655, 2851, 3569
BsmBI CGTCTC 1 cut(s) 1344
BsmFI GGGAC 5 cut(s) 1537, 2174, 3050, 3241, 3805
BsmI GAATGC 2 cut(s) 388, 857
BsnI GGCC 5 cut(s) 498, 2435, 3280, 4054, 4069
Bso31I GGTCTC 1 cut(s) 3569
BsoBI CYCGRG 4 cut(s) 2000, 2966, 3258, 3959
Bsp1286I GDGCHC 5 cut(s) 414, 1112, 2046, 3044, 3331
Bsp13I TCCGGA 1 cut(s) 1055
Bsp1407I TGTACA 1 cut(s) 751
Bsp19I CCATGG 2 cut(s) 2733, 4351
BspACI CCGC 7 cut(s) 1850, 2298, 2463, 2614, 2953, 3323, 3995
BspANI GGCC 5 cut(s) 498, 2435, 3280, 4054, 4069
BspCNI CTCAG 9 cut(s) 70, 1014, 1019, 1267, 1681, 2218, 2492, 3367, 3826
BspEI TCCGGA 1 cut(s) 1055
BspFNI CGCG 4 cut(s) 671, 2465, 3325, 3997
BspHI TCATGA 2 cut(s) 3387, 3514
BspLI GGNNCC 7 cut(s) 1281, 1525, 2043, 2520, 2580, 3983, 4064
BspMI ACCTGC 2 cut(s) 56, 870
BspPI GGATC 8 cut(s) 264, 389, 532, 705, 2242, 2513, 2526, 2629
BspT107I GGYRCC 1 cut(s) 2041
BspTI CTTAAG 2 cut(s) 1930, 3266
BspTNI GGTCTC 1 cut(s) 3569
BsrDI GCAATG 1 cut(s) 3378
BsrFI RCCGGY 1 cut(s) 4065
BsrGI TGTACA 1 cut(s) 751
BsrI ACTGG 3 cut(s) 1570, 2580, 4055
BssAI RCCGGY 1 cut(s) 4065
BssNAI GTATAC 1 cut(s) 373
BssNI GRCGYC 3 cut(s) 2865, 4242, 4359
BssSI CACGAG 2 cut(s) 2948, 3824
BssT1I CCWWGG 5 cut(s) 2484, 2733, 2928, 3736, 4351
Bst1107I GTATAC 1 cut(s) 373
Bst2BI CACGAG 2 cut(s) 2948, 3824
Bst2UI CCWGG 6 cut(s) 306, 746, 867, 2332, 3045, 3446
Bst4CI ACNGT 8 cut(s) 737, 1089, 1785, 2158, 2676, 2698, 3005, 4121
Bst6I CTCTTC 2 cut(s) 566, 3087
BstACI GRCGYC 3 cut(s) 2865, 4242, 4359
BstAFI CTTAAG 2 cut(s) 1930, 3266
BstAPI GCANNNNNTGC 1 cut(s) 4304
BstAUI TGTACA 1 cut(s) 751
BstBAI YACGTR 1 cut(s) 3434
BstC8I GCNNGC 5 cut(s) 1217, 1502, 2888, 3327, 4282
BstDSI CCRYGG 4 cut(s) 2733, 3605, 4148, 4351
BstENI CCTNNNNNAGG 2 cut(s) 594, 1933
BstFNI CGCG 4 cut(s) 671, 2465, 3325, 3997
BstH2I RGCGCY 1 cut(s) 3405
BstHHI GCGC 5 cut(s) 3158, 3404, 3999, 4226, 4274
BstMAI GTCTC 5 cut(s) 568, 1344, 1655, 2851, 3569
BstMWI GCNNNNNNNGC 8 cut(s) 62, 359, 935, 2050, 2306, 3155, 3277, 4304
BstNI CCWGG 6 cut(s) 306, 746, 867, 2332, 3045, 3446
BstNSI RCATGY 5 cut(s) 1168, 1219, 2252, 2282, 3426
BstPAI GACNNNNGTC 2 cut(s) 2156, 3666
BstSCI CCNGG 6 cut(s) 304, 744, 865, 2330, 3043, 3444
BstSFI CTRYAG 2 cut(s) 1781, 3747
BstSLI GKGCMC 2 cut(s) 1112, 2046
BstUI CGCG 4 cut(s) 671, 2465, 3325, 3997
BstV1I GCAGC 6 cut(s) 1188, 1616, 1929, 2232, 3093, 3193
BstV2I GAAGAC 2 cut(s) 444, 2057
BstX2I RGATCY 2 cut(s) 2234, 2518
BstXI CCANNNNNNTGG 4 cut(s) 914, 2618, 2750, 4095
BstYI RGATCY 2 cut(s) 2234, 2518
BstZ17I GTATAC 1 cut(s) 373
BsuI GTATCC 2 cut(s) 2799, 3497
BsuRI GGCC 5 cut(s) 498, 2435, 3280, 4054, 4069
BtgI CCRYGG 4 cut(s) 2733, 3605, 4148, 4351
BtgZI GCGATG 3 cut(s) 652, 4294, 4386
BtrI CACGTC 1 cut(s) 3274
BtsIMutI CAGTG 7 cut(s) 355, 1272, 2096, 2681, 3010, 3400, 3999
BveI ACCTGC 2 cut(s) 56, 870
Cac8I GCNNGC 5 cut(s) 1217, 1502, 2888, 3327, 4282
CciI TCATGA 2 cut(s) 3387, 3514
CfoI GCGC 5 cut(s) 3158, 3404, 3999, 4226, 4274
Cfr10I RCCGGY 1 cut(s) 4065
Cfr13I GGNCC 5 cut(s) 302, 742, 1524, 2740, 2813
CseI GACGC 3 cut(s) 2873, 4231, 4367
CspCI CAANNNNNGTGG 2 cut(s) 1305, 1340
DraI TTTAAA 1 cut(s) 682
DrdI GACNNNNNNGTC 1 cut(s) 980
DseDI GACNNNNNNGTC 1 cut(s) 980
EaeI YGGCCR 2 cut(s) 2433, 4052
Eam1104I CTCTTC 2 cut(s) 566, 3087
EarI CTCTTC 2 cut(s) 566, 3087
Ecl136II GAGCTC 1 cut(s) 412
Eco130I CCWWGG 5 cut(s) 2484, 2733, 2928, 3736, 4351
Eco24I GRGCYC 2 cut(s) 414, 3044
Eco31I GGTCTC 1 cut(s) 3569
Eco32I GATATC 2 cut(s) 1070, 2500
Eco47I GGWCC 5 cut(s) 302, 742, 1524, 2740, 2813
Eco47III AGCGCT 1 cut(s) 3403
Eco53kI GAGCTC 1 cut(s) 412
Eco57I CTGAAG 5 cut(s) 420, 1373, 1484, 2160, 4023
Eco88I CYCGRG 4 cut(s) 2000, 2966, 3258, 3959
EcoICRI GAGCTC 1 cut(s) 412
EcoNI CCTNNNNNAGG 2 cut(s) 594, 1933
EcoRI GAATTC 1 cut(s) 4136
EcoRII CCWGG 6 cut(s) 304, 744, 865, 2330, 3043, 3444
EcoRV GATATC 2 cut(s) 1070, 2500
EcoT14I CCWWGG 5 cut(s) 2484, 2733, 2928, 3736, 4351
EcoT22I ATGCAT 3 cut(s) 388, 810, 3942
EcoT38I GRGCYC 2 cut(s) 414, 3044
ErhI CCWWGG 5 cut(s) 2484, 2733, 2928, 3736, 4351
Esp3I CGTCTC 1 cut(s) 1344
FalI AAGNNNNNCTT 4 cut(s) 126, 158, 3489, 3521
FaqI GGGAC 5 cut(s) 1537, 2174, 3050, 3241, 3805
FauNDI CATATG 1 cut(s) 2634
FbaI TGATCA 3 cut(s) 345, 1678, 3390
FblI GTMKAC 3 cut(s) 372, 2026, 4100
Fnu4HI GCNGC 8 cut(s) 1177, 1630, 1918, 2246, 2298, 2463, 3107, 3182
FriOI GRGCYC 2 cut(s) 414, 3044
Fsp4HI GCNGC 8 cut(s) 1177, 1630, 1918, 2246, 2298, 2463, 3107, 3182
FspAI RTGCGCAY 1 cut(s) 3157
FspBI CTAG 6 cut(s) 1416, 1865, 1940, 2358, 2762, 4208
FspI TGCGCA 1 cut(s) 3157
GlaI GCGC 5 cut(s) 3157, 3403, 3998, 4225, 4273
GluI GCNGC 8 cut(s) 1177, 1630, 1918, 2246, 2298, 2463, 3107, 3182
GsaI CCCAGC 1 cut(s) 4019
GsuI CTGGAG 3 cut(s) 1248, 1526, 1736
HaeII RGCGCY 1 cut(s) 3405
HaeIII GGCC 5 cut(s) 498, 2435, 3280, 4054, 4069
HapII CCGG 5 cut(s) 1056, 2138, 2516, 3481, 4066
HgaI GACGC 3 cut(s) 2873, 4231, 4367
HhaI GCGC 5 cut(s) 3158, 3404, 3999, 4226, 4274
Hin1I GRCGYC 3 cut(s) 2865, 4242, 4359
Hin6I GCGC 5 cut(s) 3156, 3402, 3997, 4224, 4272
HinP1I GCGC 5 cut(s) 3156, 3402, 3997, 4224, 4272
HincII GTYRAC 1 cut(s) 1260
HindII GTYRAC 1 cut(s) 1260
HindIII AAGCTT 7 cut(s) 402, 1318, 1498, 1721, 2051, 4282, 4378
HpaII CCGG 5 cut(s) 1056, 2138, 2516, 3481, 4066
HphI GGTGA 5 cut(s) 80, 391, 1325, 2127, 2713
HpyAV CCTTC 6 cut(s) 509, 1412, 1478, 1929, 3694, 4288
HpyCH4III ACNGT 8 cut(s) 737, 1089, 1785, 2158, 2676, 2698, 3005, 4121
HpyCH4IV ACGT 5 cut(s) 656, 874, 2073, 3273, 3433
HpyF10VI GCNNNNNNNGC 8 cut(s) 62, 359, 935, 2050, 2306, 3155, 3277, 4304
HpySE526I ACGT 5 cut(s) 656, 874, 2073, 3273, 3433
Hsp92I GRCGYC 3 cut(s) 2865, 4242, 4359
HspAI GCGC 5 cut(s) 3156, 3402, 3997, 4224, 4272
Kpn2I TCCGGA 1 cut(s) 1055
Ksp22I TGATCA 3 cut(s) 345, 1678, 3390
LmnI GCTCC 5 cut(s) 359, 1212, 1507, 1673, 1895
Lsp1109I GCAGC 6 cut(s) 1188, 1616, 1929, 2232, 3093, 3193
LweI GCATC 6 cut(s) 795, 1188, 1618, 2767, 3167, 3927
MaeI CTAG 6 cut(s) 1416, 1865, 1940, 2358, 2762, 4208
MaeII ACGT 5 cut(s) 656, 874, 2073, 3273, 3433
MaeIII GTNAC 8 cut(s) 725, 778, 1083, 1845, 2149, 3217, 3429, 4121
MfeI CAATTG 6 cut(s) 269, 990, 1551, 2036, 4219, 4267
MflI RGATCY 2 cut(s) 2234, 2518
MhlI GDGCHC 5 cut(s) 414, 1112, 2046, 3044, 3331
MlsI TGGCCA 1 cut(s) 4054
MluNI TGGCCA 1 cut(s) 4054
MlyI GAGTC 7 cut(s) 2150, 2196, 2888, 2978, 3104, 3893, 3970
MmeI TCCRAC 2 cut(s) 427, 1162
Mox20I TGGCCA 1 cut(s) 4054
Mph1103I ATGCAT 3 cut(s) 388, 810, 3942
MroI TCCGGA 1 cut(s) 1055
MroXI GAANNNNTTC 4 cut(s) 456, 840, 3716, 3773
MscI TGGCCA 1 cut(s) 4054
MslI CAYNNNNRTG 2 cut(s) 1518, 2948
Msp20I TGGCCA 1 cut(s) 4054
MspCI CTTAAG 2 cut(s) 1930, 3266
MspI CCGG 5 cut(s) 1056, 2138, 2516, 3481, 4066
MspR9I CCNGG 6 cut(s) 306, 746, 867, 2332, 3045, 3446
MunI CAATTG 6 cut(s) 269, 990, 1551, 2036, 4219, 4267
Mva1269I GAATGC 2 cut(s) 388, 857
MvaI CCWGG 6 cut(s) 306, 746, 867, 2332, 3045, 3446
MvnI CGCG 4 cut(s) 671, 2465, 3325, 3997
MwoI GCNNNNNNNGC 8 cut(s) 62, 359, 935, 2050, 2306, 3155, 3277, 4304
NcoI CCATGG 2 cut(s) 2733, 4351
NdeI CATATG 1 cut(s) 2634
NlaIV GGNNCC 7 cut(s) 1281, 1525, 2043, 2520, 2580, 3983, 4064
NmuCI GTSAC 4 cut(s) 725, 2149, 3429, 4121
NsbI TGCGCA 1 cut(s) 3157
NsiI ATGCAT 3 cut(s) 388, 810, 3942
NspI RCATGY 5 cut(s) 1168, 1219, 2252, 2282, 3426
OliI CACNNNNGTG 1 cut(s) 2948
PaeI GCATGC 1 cut(s) 1219
PaeR7I CTCGAG 3 cut(s) 2000, 2966, 3959
PagI TCATGA 2 cut(s) 3387, 3514
PaqCI CACCTGC 1 cut(s) 56
PasI CCCWGGG 1 cut(s) 3044
PciI ACATGT 3 cut(s) 1164, 2278, 3422
PcsI WCGNNNNNNNCGW 2 cut(s) 2868, 4239
PctI GAATGC 2 cut(s) 388, 857
PdmI GAANNNNTTC 4 cut(s) 456, 840, 3716, 3773
PflFI GACNNNGTC 1 cut(s) 2843
PkrI GCNGC 8 cut(s) 1178, 1631, 1919, 2247, 2299, 2464, 3108, 3183
PleI GAGTC 7 cut(s) 2149, 2195, 2887, 2977, 3103, 3893, 3970
PpsI GAGTC 7 cut(s) 2149, 2195, 2887, 2977, 3103, 3893, 3970
Ppu21I YACGTR 1 cut(s) 3434
PscI ACATGT 3 cut(s) 1164, 2278, 3422
PshAI GACNNNNGTC 2 cut(s) 2156, 3666
PshBI ATTAAT 3 cut(s) 1230, 3362, 3951
Psp124BI GAGCTC 1 cut(s) 414
Psp1406I AACGTT 1 cut(s) 656
Psp6I CCWGG 6 cut(s) 304, 744, 865, 2330, 3043, 3444
PspFI CCCAGC 1 cut(s) 4015
PspGI CCWGG 6 cut(s) 304, 744, 865, 2330, 3043, 3444
PspN4I GGNNCC 7 cut(s) 1281, 1525, 2043, 2520, 2580, 3983, 4064
PspPI GGNCC 5 cut(s) 302, 742, 1524, 2740, 2813
PspXI VCTCGAGB 3 cut(s) 2000, 2966, 3959
PsrI GAACNNNNNNTAC 2 cut(s) 4109, 4141
PsuI RGATCY 2 cut(s) 2234, 2518
PsyI GACNNNGTC 1 cut(s) 2843
RseI CAYNNNNRTG 2 cut(s) 1518, 2948
SacI GAGCTC 1 cut(s) 414
SatI GCNGC 8 cut(s) 1177, 1630, 1918, 2246, 2298, 2463, 3107, 3182
Sau96I GGNCC 5 cut(s) 302, 742, 1524, 2740, 2813
ScaI AGTACT 2 cut(s) 3264, 3859
SchI GAGTC 7 cut(s) 2150, 2196, 2888, 2978, 3104, 3893, 3970
ScrFI CCNGG 6 cut(s) 306, 746, 867, 2332, 3045, 3446
SduI GDGCHC 5 cut(s) 414, 1112, 2046, 3044, 3331
SfaNI GCATC 6 cut(s) 795, 1188, 1618, 2767, 3167, 3927
SfcI CTRYAG 2 cut(s) 1781, 3747
Sfr274I CTCGAG 3 cut(s) 2000, 2966, 3959
SinI GGWCC 5 cut(s) 302, 742, 1524, 2740, 2813
SlaI CTCGAG 3 cut(s) 2000, 2966, 3959
SmiMI CAYNNNNRTG 2 cut(s) 1518, 2948
SphI GCATGC 1 cut(s) 1219
SsiI CCGC 7 cut(s) 1850, 2298, 2463, 2614, 2953, 3323, 3995
SspI AATATT 1 cut(s) 4092
SspMI CTAG 6 cut(s) 1416, 1865, 1940, 2358, 2762, 4208
SstI GAGCTC 1 cut(s) 414
StyD4I CCNGG 6 cut(s) 304, 744, 865, 2330, 3043, 3444
StyI CCWWGG 5 cut(s) 2484, 2733, 2928, 3736, 4351
TaaI ACNGT 8 cut(s) 737, 1089, 1785, 2158, 2676, 2698, 3005, 4121
TaiI ACGT 5 cut(s) 659, 877, 2076, 3276, 3436
TauI GCSGC 2 cut(s) 2300, 2465
TscAI CASTG 7 cut(s) 355, 1279, 2103, 2681, 3010, 3400, 4006
TseFI GTSAC 4 cut(s) 725, 2149, 3429, 4121
TseI GCWGC 6 cut(s) 1176, 1629, 1917, 2245, 3106, 3181
Tsp45I GTSAC 4 cut(s) 725, 2149, 3429, 4121
TspGWI ACGGA 4 cut(s) 2046, 2117, 2747, 2860
TspRI CASTG 7 cut(s) 355, 1279, 2103, 2681, 3010, 3400, 4006
Tth111I GACNNNGTC 1 cut(s) 2843
Vha464I CTTAAG 2 cut(s) 1930, 3266
VpaK11BI GGWCC 5 cut(s) 302, 742, 1524, 2740, 2813
VspI ATTAAT 3 cut(s) 1230, 3362, 3951
XagI CCTNNNNNAGG 2 cut(s) 594, 1933
XceI RCATGY 5 cut(s) 1168, 1219, 2252, 2282, 3426
XcmI CCANNNNNNNNNTGG 1 cut(s) 2731
XhoI CTCGAG 3 cut(s) 2000, 2966, 3959
XmiI GTMKAC 3 cut(s) 372, 2026, 4100
XmnI GAANNNNTTC 4 cut(s) 456, 840, 3716, 3773
XspI CTAG 6 cut(s) 1416, 1865, 1940, 2358, 2762, 4208
ZrmI AGTACT 2 cut(s) 3264, 3859
Zsp2I ATGCAT 3 cut(s) 388, 810, 3942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.