Rh7CG511200

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000129
Physical Location & Seq
Forward (+)
69050522 .. 69055969
5448 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG511200.1

Sequence Viewer

Length: 1851 bp
ATGACTAAAGATGCTTTTGTGTCTACGTTGCAGGAGCCTTTCTTTTCAGATTTCAGTAGCGCACATCCTACAGATGAAATTCCAGAGTGGTTCAGCGCTATATCTACCAGAAATCCCATATTAAGCCAGATACCTCAAAATCTGGCCGATGATAACAAGTGGAAGGGATTTGCCGCGGGTGCTATATTCTCAGTCAAGGGGCACACTGCTCTCTCCCTTATTGAACCGGATCCTGATTTTTCTAATTACTCGTATCAAGTCACAATCGAAACTGATGTTGTGCGCCTGGAACCACAAGTGTTCGGGATAGGACTCAGCTGCCTTGCATCAAGTTCTCATCTGCTTATAATTTTCTATATAGAGTGTCTGAAGTTTCCACGATGGGGGTTAAATCAATCAACTGTGGTGAGAGCTATATTTGAAACCACCAATCCATCCATGGTGGTCCAGAAATGTGGAATTCATCTACTCTATGAGCAAGATGCTGGATGGCATTCCAGAATCCGTAGGCATCTACCGATTGTGCTGAATGAAAAGGACGCCGGCTCTCTACGGGATTCTGCCTGGCTTCGTCCATCTGTTAGATGGGAGAAATTCATTCCACCCTTGGAAGAAGAATCCACACTTGTGCTAAGAAAGAACCTAGAGTCTGTTCTTCCAAGATACCTTGAGGCACTAAACTGTTATTCTAAAACGTACAAATTTAACCTCAGTGGAAGGCCAGGGTGGTTTTATAAGTCGTTTGCCTTTCGTGAGAGGCCAGATTTTACTGTAGCGTCGATCAAGCTGCCTCAAGATCTACTCAAGAGCAAGAAGTGGATGGGATTTGCAATATCCGCATCACTTGTAGAGGAAGTGGGGCAAACAATGAAAAAGGACAACTATTGGGTTCGCGTATTTGTAAGAACCAAGGATAAAATTCGTATGGGTGTGGCCCGAGTACTTAAGCACGTCAGGCCATTGTCAGAAGAACATCATCAATTATTGGTTATTTACATACCGCGGGCACAGATTCTCGAGGTGTTGTTCACTCAGACATTAACAACTGCAATGGACTTTTACATCAAGATCAGTGATAGCGCTCATGTAAAGTTTCAAAGTTGTGGGTTCCGTACTGTGTACCAAGAAGATATACAAGGGTTTGCTGATACAATTATCCGGTGCATGCAAAGGGAAGAATCTCTTAAATCTCACAATAAGTTAGTGGTAGAAGAATGGATACGATTGATACGATTGCAAGGTGCCCTAAATTTAGAGAGAATGACAGAACAGGATTCCAGAACCCCACGGGAAAAACAATTTGAATTGCACTTACAAAAATATAGAAATTGGGACTGGTCTGACCCTCATCCTGTTTGTTGTCACTTCGAGGGAGCTGAAATTTTCAAGTTGAAATGGTTCATGCCTTTCATCAACGAAGGCAACTCTGCAGAAATCCAACTGCCTCTGAATGTGTTCAATGATGATAATTGGTTGGGCTTTGCCGTATGTTCTCAATTGTCCCACGACCAATATCCAAACATTAGTCTTGGCAGTACTGCTGCTGATTCAGAGGAGGTTATGCTTATTTGCTGTCTGGCCTCTGATGTTGCTTCGCAGGGCTTATTTGATTACAACTTTGAATTACGTTTAAAGATTCAAGAGCCATCGGAATACGATGCGACTTGGTTCTTTTATATACCGCGCACTAAAGCTCGTAGTAATGTTTGGAGACAATGCAAATTGGCCAGGATAACTATGTTGTTGTCTAGTCCAAGCTCAGGAGTAGTGCATAGTTGTGCCCTTCGTCTACTATTTAAGGAGGACGTTGAACGTCTTGTAAAAACACTGGCCCACGCCGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

616

Amino Acids

71.15

Weight (kDa)

6.8

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 23 - 162 6.4e-06 C-JID domain
C-JID PF20160 257 - 378 3.4e-06 C-JID domain
C-JID PF20160 466 - 604 2.9e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 347, 735
AccB1I GGYRCC 1 cut(s) 1241
AccI GTMKAC 2 cut(s) 23, 1789
AccII CGCG 4 cut(s) 176, 894, 1003, 1684
AciI CCGC 6 cut(s) 174, 176, 837, 1001, 1003, 1682
AclWI GGATC 2 cut(s) 224, 237
AcoI YGGCCR 2 cut(s) 144, 1725
AcsI RAATTY 7 cut(s) 78, 459, 593, 701, 918, 1249, 1380
AcuI CTGAAG 1 cut(s) 389
AcyI GRCGYC 1 cut(s) 540
AfaI GTAC 5 cut(s) 698, 942, 1114, 1121, 1537
AfeI AGCGCT 2 cut(s) 97, 1081
AfiI CCNNNNNNNGG 2 cut(s) 383, 1760
AflII CTTAAG 1 cut(s) 944
AjiI CACGTC 1 cut(s) 952
AjnI CCWGG 4 cut(s) 285, 563, 721, 1727
AleI CACNNNNGTG 1 cut(s) 626
AluBI AGCT 6 cut(s) 318, 413, 787, 1376, 1694, 1758
AluI AGCT 6 cut(s) 318, 413, 787, 1376, 1694, 1758
Alw26I GTCTC 1 cut(s) 1705
AlwI GGATC 2 cut(s) 224, 237
Ama87I CYCGRG 2 cut(s) 936, 1016
Aor51HI AGCGCT 2 cut(s) 97, 1081
AoxI GGCC 8 cut(s) 144, 719, 758, 933, 956, 1578, 1725, 1830
ApeKI GCWGC 3 cut(s) 318, 787, 1541
ApoI RAATTY 7 cut(s) 78, 459, 593, 701, 918, 1249, 1380
Asp700I GAANNNNTTC 2 cut(s) 1397, 1454
AspLEI GCGC 5 cut(s) 62, 98, 285, 1082, 1686
AspS9I GGNCC 3 cut(s) 445, 934, 1831
AsuHPI GGTGA 1 cut(s) 418
AvaI CYCGRG 2 cut(s) 936, 1016
AvaII GGWCC 1 cut(s) 445
BaeGI GKGCMC 4 cut(s) 204, 1009, 1246, 1783
BalI TGGCCA 1 cut(s) 1727
BamHI GGATCC 1 cut(s) 229
BanI GGYRCC 1 cut(s) 1241
BarI GAAGNNNNNNTAC 2 cut(s) 1203, 1235
BbvI GCAGC 3 cut(s) 305, 774, 1528
BccI CCATC 7 cut(s) 375, 442, 483, 579, 583, 814, 1654
BceAI ACGGC 1 cut(s) 1469
BcgI CGANNNNNNTGC 2 cut(s) 769, 803
BciT130I CCWGG 4 cut(s) 287, 565, 723, 1729
BciVI GTATCC 1 cut(s) 1212
BcoDI GTCTC 1 cut(s) 1705
BfaI CTAG 2 cut(s) 644, 1749
BfmI CTRYAG 3 cut(s) 69, 771, 1428
BfoI RGCGCY 2 cut(s) 99, 1083
BfrI CTTAAG 1 cut(s) 944
BfuI GTATCC 1 cut(s) 1212
BglII AGATCT 1 cut(s) 796
BisI GCNGC 4 cut(s) 174, 319, 788, 1542
BlsI GCNGC 4 cut(s) 175, 320, 789, 1543
BmcAI AGTACT 2 cut(s) 942, 1537
Bme1390I CCNGG 4 cut(s) 287, 565, 723, 1729
Bme18I GGWCC 1 cut(s) 445
BmeT110I CYCGRG 2 cut(s) 936, 1016
BmgBI CACGTC 1 cut(s) 952
BmgT120I GGNCC 3 cut(s) 445, 934, 1831
BmiI GGNNCC 5 cut(s) 36, 231, 291, 1109, 1243
BmrFI CCNGG 4 cut(s) 287, 565, 723, 1729
BmsI GCATC 5 cut(s) 335, 472, 520, 848, 1648
Bpu10I CCTNAGC 1 cut(s) 1759
BpuEI CTTGAG 3 cut(s) 689, 777, 788
BsaHI GRCGYC 1 cut(s) 540
BsaJI CCNNGG 7 cut(s) 174, 438, 606, 722, 909, 1001, 1286
BsaWI WCCGGW 2 cut(s) 226, 1158
Bsc4I CCNNNNNNNGG 2 cut(s) 383, 1760
Bse118I RCCGGY 1 cut(s) 542
Bse1I ACTGG 2 cut(s) 1340, 1833
Bse3DI GCAATG 1 cut(s) 1056
BseBI CCWGG 4 cut(s) 287, 565, 723, 1729
BseDI CCNNGG 7 cut(s) 174, 438, 606, 722, 909, 1001, 1286
BseGI GGATG 5 cut(s) 64, 434, 494, 825, 1348
BseLI CCNNNNNNNGG 2 cut(s) 383, 1760
BseMI GCAATG 1 cut(s) 1056
BseMII CTCAG 5 cut(s) 204, 328, 724, 1046, 1773
BseNI ACTGG 2 cut(s) 1340, 1833
BseRI GAGGAG 1 cut(s) 1568
BseSI GKGCMC 4 cut(s) 204, 1009, 1246, 1783
BseXI GCAGC 3 cut(s) 305, 774, 1528
Bsh1236I CGCG 4 cut(s) 176, 894, 1003, 1684
BshFI GGCC 8 cut(s) 146, 721, 760, 935, 958, 1580, 1727, 1832
BshNI GGYRCC 1 cut(s) 1241
BsiHKCI CYCGRG 2 cut(s) 936, 1016
BsiSI CCGG 3 cut(s) 227, 543, 1159
BslFI GGGAC 2 cut(s) 1346, 1486
BslI CCNNNNNNNGG 2 cut(s) 383, 1760
BsmAI GTCTC 1 cut(s) 1705
BsmFI GGGAC 2 cut(s) 1346, 1486
BsmI GAATGC 1 cut(s) 493
BsnI GGCC 8 cut(s) 146, 721, 760, 935, 958, 1580, 1727, 1832
BsoBI CYCGRG 2 cut(s) 936, 1016
Bsp1286I GDGCHC 4 cut(s) 204, 1009, 1246, 1783
Bsp143I GATC 4 cut(s) 229, 780, 796, 1068
Bsp19I CCATGG 1 cut(s) 438
BspACI CCGC 6 cut(s) 174, 176, 837, 1001, 1003, 1682
BspANI GGCC 8 cut(s) 146, 721, 760, 935, 958, 1580, 1727, 1832
BspCNI CTCAG 5 cut(s) 203, 327, 723, 1045, 1772
BspFNI CGCG 4 cut(s) 176, 894, 1003, 1684
BspLI GGNNCC 5 cut(s) 36, 231, 291, 1109, 1243
BspMAI CTGCAG 1 cut(s) 1432
BspPI GGATC 2 cut(s) 224, 237
BspT107I GGYRCC 1 cut(s) 1241
BspTI CTTAAG 1 cut(s) 944
BsrDI GCAATG 1 cut(s) 1056
BsrFI RCCGGY 1 cut(s) 542
BsrI ACTGG 2 cut(s) 1340, 1833
BssAI RCCGGY 1 cut(s) 542
BssECI CCNNGG 7 cut(s) 174, 438, 606, 722, 909, 1001, 1286
BssMI GATC 4 cut(s) 229, 780, 796, 1068
BssNI GRCGYC 1 cut(s) 540
BssT1I CCWWGG 3 cut(s) 438, 606, 909
Bst2UI CCWGG 4 cut(s) 287, 565, 723, 1729
Bst4CI ACNGT 4 cut(s) 403, 683, 772, 1117
BstACI GRCGYC 1 cut(s) 540
BstAFI CTTAAG 1 cut(s) 944
BstC8I GCNNGC 3 cut(s) 544, 1005, 1166
BstDEI CTNAG 6 cut(s) 190, 314, 632, 710, 1032, 1759
BstDSI CCRYGG 4 cut(s) 174, 438, 1001, 1286
BstF5I GGATG 5 cut(s) 64, 434, 494, 825, 1348
BstFNI CGCG 4 cut(s) 176, 894, 1003, 1684
BstH2I RGCGCY 2 cut(s) 99, 1083
BstHHI GCGC 5 cut(s) 62, 98, 285, 1082, 1686
BstKTI GATC 4 cut(s) 232, 783, 799, 1071
BstMAI GTCTC 1 cut(s) 1705
BstMBI GATC 4 cut(s) 229, 780, 796, 1068
BstMWI GCNNNNNNNGC 3 cut(s) 179, 836, 955
BstNI CCWGG 4 cut(s) 287, 565, 723, 1729
BstNSI RCATGY 1 cut(s) 1168
BstSCI CCNGG 4 cut(s) 285, 563, 721, 1727
BstSFI CTRYAG 3 cut(s) 69, 771, 1428
BstSLI GKGCMC 4 cut(s) 204, 1009, 1246, 1783
BstUI CGCG 4 cut(s) 176, 894, 1003, 1684
BstV1I GCAGC 3 cut(s) 305, 774, 1528
BstX2I RGATCY 2 cut(s) 229, 796
BstXI CCANNNNNNTGG 1 cut(s) 455
BstYI RGATCY 2 cut(s) 229, 796
BsuI GTATCC 1 cut(s) 1212
BsuRI GGCC 8 cut(s) 146, 721, 760, 935, 958, 1580, 1727, 1832
BtgI CCRYGG 4 cut(s) 174, 438, 1001, 1286
BtrI CACGTC 1 cut(s) 952
BtsCI GGATG 5 cut(s) 64, 434, 494, 825, 1348
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 4 cut(s) 204, 718, 1078, 1826
Cac8I GCNNGC 3 cut(s) 544, 1005, 1166
CfoI GCGC 5 cut(s) 62, 98, 285, 1082, 1686
Cfr10I RCCGGY 1 cut(s) 542
Cfr13I GGNCC 3 cut(s) 445, 934, 1831
Cfr42I CCGCGG 2 cut(s) 177, 1004
CseI GACGC 2 cut(s) 548, 765
Csp6I GTAC 5 cut(s) 697, 941, 1113, 1120, 1536
CviAII CATG 4 cut(s) 439, 1085, 1165, 1402
CviQI GTAC 5 cut(s) 697, 941, 1113, 1120, 1536
DdeI CTNAG 6 cut(s) 190, 314, 632, 710, 1032, 1759
DpnI GATC 4 cut(s) 231, 782, 798, 1070
DpnII GATC 4 cut(s) 229, 780, 796, 1068
DraI TTTAAA 1 cut(s) 1632
EaeI YGGCCR 2 cut(s) 144, 1725
Eco130I CCWWGG 3 cut(s) 438, 606, 909
Eco47I GGWCC 1 cut(s) 445
Eco47III AGCGCT 2 cut(s) 97, 1081
Eco57I CTGAAG 1 cut(s) 389
Eco88I CYCGRG 2 cut(s) 936, 1016
EcoRI GAATTC 1 cut(s) 459
EcoRII CCWGG 4 cut(s) 285, 563, 721, 1727
EcoT14I CCWWGG 3 cut(s) 438, 606, 909
ErhI CCWWGG 3 cut(s) 438, 606, 909
FaeI CATG 4 cut(s) 442, 1088, 1168, 1405
FalI AAGNNNNNCTT 2 cut(s) 1167, 1199
FaqI GGGAC 2 cut(s) 1346, 1486
FatI CATG 4 cut(s) 438, 1084, 1164, 1401
FauI CCCGC 2 cut(s) 169, 996
FblI GTMKAC 2 cut(s) 23, 1789
Fnu4HI GCNGC 4 cut(s) 174, 319, 788, 1542
FokI GGATG 5 cut(s) 51, 421, 501, 832, 1335
Fsp4HI GCNGC 4 cut(s) 174, 319, 788, 1542
FspBI CTAG 2 cut(s) 644, 1749
GlaI GCGC 5 cut(s) 61, 97, 284, 1081, 1685
GluI GCNGC 4 cut(s) 174, 319, 788, 1542
HaeII RGCGCY 2 cut(s) 99, 1083
HaeIII GGCC 8 cut(s) 146, 721, 760, 935, 958, 1580, 1727, 1832
HapII CCGG 3 cut(s) 227, 543, 1159
HgaI GACGC 2 cut(s) 548, 765
HhaI GCGC 5 cut(s) 62, 98, 285, 1082, 1686
Hin1I GRCGYC 1 cut(s) 540
Hin1II CATG 4 cut(s) 442, 1088, 1168, 1405
Hin6I GCGC 5 cut(s) 60, 96, 283, 1080, 1684
HinP1I GCGC 5 cut(s) 60, 96, 283, 1080, 1684
HpaII CCGG 3 cut(s) 227, 543, 1159
HphI GGTGA 1 cut(s) 418
Hpy166II GTNNAC 4 cut(s) 24, 1029, 1120, 1790
Hpy188I TCNGA 9 cut(s) 49, 369, 967, 1035, 1342, 1449, 1552, 1585, 1651
Hpy8I GTNNAC 4 cut(s) 24, 1029, 1120, 1790
Hpy99I CGWCG 1 cut(s) 781
HpyAV CCTTC 4 cut(s) 157, 711, 1412, 1793
HpyCH4III ACNGT 4 cut(s) 403, 683, 772, 1117
HpyCH4IV ACGT 6 cut(s) 26, 695, 951, 1627, 1806, 1813
HpyF10VI GCNNNNNNNGC 3 cut(s) 179, 836, 955
HpyF3I CTNAG 6 cut(s) 190, 314, 632, 710, 1032, 1759
HpySE526I ACGT 6 cut(s) 26, 695, 951, 1627, 1806, 1813
Hsp92I GRCGYC 1 cut(s) 540
Hsp92II CATG 4 cut(s) 442, 1088, 1168, 1405
HspAI GCGC 5 cut(s) 60, 96, 283, 1080, 1684
KroI GCCGGC 1 cut(s) 542
KroNI GCCGGC 1 cut(s) 544
KspI CCGCGG 2 cut(s) 177, 1004
Kzo9I GATC 4 cut(s) 229, 780, 796, 1068
LmnI GCTCC 2 cut(s) 34, 1373
Lsp1109I GCAGC 3 cut(s) 305, 774, 1528
LweI GCATC 5 cut(s) 335, 472, 520, 848, 1648
MaeI CTAG 2 cut(s) 644, 1749
MaeII ACGT 6 cut(s) 26, 695, 951, 1627, 1806, 1813
MaeIII GTNAC 2 cut(s) 259, 1361
MalI GATC 4 cut(s) 231, 782, 798, 1070
MboI GATC 4 cut(s) 229, 780, 796, 1068
MboII GAAGA 7 cut(s) 623, 626, 647, 980, 1139, 1187, 1223
MfeI CAATTG 1 cut(s) 1496
MflI RGATCY 2 cut(s) 229, 796
MhlI GDGCHC 4 cut(s) 204, 1009, 1246, 1783
MlsI TGGCCA 1 cut(s) 1727
MluNI TGGCCA 1 cut(s) 1727
MlyI GAGTC 2 cut(s) 306, 656
MmeI TCCRAC 1 cut(s) 1462
Mox20I TGGCCA 1 cut(s) 1727
MroNI GCCGGC 1 cut(s) 542
MroXI GAANNNNTTC 2 cut(s) 1397, 1454
MscI TGGCCA 1 cut(s) 1727
MseI TTAA 8 cut(s) 122, 389, 705, 945, 1040, 1185, 1631, 1797
MslI CAYNNNNRTG 2 cut(s) 626, 1776
Msp20I TGGCCA 1 cut(s) 1727
MspA1I CMGCKG 3 cut(s) 176, 318, 1003
MspCI CTTAAG 1 cut(s) 944
MspI CCGG 3 cut(s) 227, 543, 1159
MspR9I CCNGG 4 cut(s) 287, 565, 723, 1729
MunI CAATTG 1 cut(s) 1496
Mva1269I GAATGC 1 cut(s) 493
MvaI CCWGG 4 cut(s) 287, 565, 723, 1729
MvnI CGCG 4 cut(s) 176, 894, 1003, 1684
MwoI GCNNNNNNNGC 3 cut(s) 179, 836, 955
NaeI GCCGGC 1 cut(s) 544
NcoI CCATGG 1 cut(s) 438
NdeII GATC 4 cut(s) 229, 780, 796, 1068
NgoMIV GCCGGC 1 cut(s) 542
NlaIII CATG 4 cut(s) 442, 1088, 1168, 1405
NlaIV GGNNCC 5 cut(s) 36, 231, 291, 1109, 1243
NmuCI GTSAC 2 cut(s) 259, 1361
NspI RCATGY 1 cut(s) 1168
OliI CACNNNNGTG 1 cut(s) 626
PaeI GCATGC 1 cut(s) 1168
PaeR7I CTCGAG 1 cut(s) 1016
PcsI WCGNNNNNNNCGW 1 cut(s) 1228
PctI GAATGC 1 cut(s) 493
PdiI GCCGGC 1 cut(s) 544
PdmI GAANNNNTTC 2 cut(s) 1397, 1454
PfeI GAWTC 8 cut(s) 501, 557, 617, 1012, 1178, 1274, 1547, 1636
PkrI GCNGC 4 cut(s) 175, 320, 789, 1543
PleI GAGTC 2 cut(s) 306, 655
PpsI GAGTC 2 cut(s) 306, 655
PsiI TTATAA 2 cut(s) 347, 735
Psp6I CCWGG 4 cut(s) 285, 563, 721, 1727
PspGI CCWGG 4 cut(s) 285, 563, 721, 1727
PspN4I GGNNCC 5 cut(s) 36, 231, 291, 1109, 1243
PspPI GGNCC 3 cut(s) 445, 934, 1831
PstI CTGCAG 1 cut(s) 1432
PsuI RGATCY 2 cut(s) 229, 796
PvuII CAGCTG 1 cut(s) 318
RsaI GTAC 5 cut(s) 698, 942, 1114, 1121, 1537
RsaNI GTAC 5 cut(s) 697, 941, 1113, 1120, 1536
RseI CAYNNNNRTG 2 cut(s) 626, 1776
SacII CCGCGG 2 cut(s) 177, 1004
SaqAI TTAA 8 cut(s) 122, 389, 705, 945, 1040, 1185, 1631, 1797
SatI GCNGC 4 cut(s) 174, 319, 788, 1542
Sau3AI GATC 4 cut(s) 229, 780, 796, 1068
Sau96I GGNCC 3 cut(s) 445, 934, 1831
ScaI AGTACT 2 cut(s) 942, 1537
SchI GAGTC 2 cut(s) 306, 656
ScrFI CCNGG 4 cut(s) 287, 565, 723, 1729
SduI GDGCHC 4 cut(s) 204, 1009, 1246, 1783
SfaNI GCATC 5 cut(s) 335, 472, 520, 848, 1648
SfcI CTRYAG 3 cut(s) 69, 771, 1428
Sfr274I CTCGAG 1 cut(s) 1016
Sfr303I CCGCGG 2 cut(s) 177, 1004
SgrBI CCGCGG 2 cut(s) 177, 1004
SinI GGWCC 1 cut(s) 445
SlaI CTCGAG 1 cut(s) 1016
SmiMI CAYNNNNRTG 2 cut(s) 626, 1776
SmlI CTYRAG 5 cut(s) 668, 792, 803, 944, 1016
SmoI CTYRAG 5 cut(s) 668, 792, 803, 944, 1016
SphI GCATGC 1 cut(s) 1168
SsiI CCGC 6 cut(s) 174, 176, 837, 1001, 1003, 1682
SspMI CTAG 2 cut(s) 644, 1749
StyD4I CCNGG 4 cut(s) 285, 563, 721, 1727
StyI CCWWGG 3 cut(s) 438, 606, 909
TaaI ACNGT 4 cut(s) 403, 683, 772, 1117
TaiI ACGT 6 cut(s) 29, 698, 954, 1630, 1809, 1816
TaqI TCGA 4 cut(s) 267, 779, 1017, 1368
TatI WGTACW 2 cut(s) 940, 1535
TauI GCSGC 1 cut(s) 176
TfiI GAWTC 8 cut(s) 501, 557, 617, 1012, 1178, 1274, 1547, 1636
Tru1I TTAA 8 cut(s) 122, 389, 705, 945, 1040, 1185, 1631, 1797
Tru9I TTAA 8 cut(s) 122, 389, 705, 945, 1040, 1185, 1631, 1797
TscAI CASTG 4 cut(s) 211, 718, 1078, 1833
TseFI GTSAC 2 cut(s) 259, 1361
TseI GCWGC 3 cut(s) 318, 787, 1541
Tsp45I GTSAC 2 cut(s) 259, 1361
TspDTI ATGAA 7 cut(s) 90, 452, 546, 586, 884, 1390, 1399
TspGWI ACGGA 2 cut(s) 494, 1100
TspRI CASTG 4 cut(s) 211, 718, 1078, 1833
Vha464I CTTAAG 1 cut(s) 944
VpaK11BI GGWCC 1 cut(s) 445
XapI RAATTY 7 cut(s) 78, 459, 593, 701, 918, 1249, 1380
XceI RCATGY 1 cut(s) 1168
XcmI CCANNNNNNNNNTGG 2 cut(s) 436, 582
XhoI CTCGAG 1 cut(s) 1016
XmiI GTMKAC 2 cut(s) 23, 1789
XmnI GAANNNNTTC 2 cut(s) 1397, 1454
XspI CTAG 2 cut(s) 644, 1749
ZrmI AGTACT 2 cut(s) 942, 1537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.