Rmu_sc0001070.1_g000010

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001070.1
OG0000129
Physical Location & Seq
Forward (+)
56171 .. 58658
2488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001070.1_g000010.1.cds

Sequence Viewer

Length: 2283 bp
atgtcaactccagacttcactgaggttcctgaacttgaagtgttagtgcttcgaaattgctcaagcttggtggaggttcacccgtctcttggatttctgaagaaacttcgctgtttggatatgacaaattgcaagtctattgagagccttccacctttcactagcttggaatcccttgaaaaattatggctttcactctgttcaggattgaagaagtttccagaaattgaaggaaatatgaaaagcttgctggagctttatgtggatgggaccagcattgaggaattgcctccatcaattgaacgcttgactggtcttaccatgttggatatgacagactgtaaaaaccttttgcatcttcccaataacattgggtgcttgacatctttaaaaagtctctatctgacaggttgctcaaaaattgatgagatacccgagaatctgaatggtatgaaatgtctggagaagcttctcattggtcgaacttccataagggagttatctttcattgtaggcatgaaaaatctacagtctctatcctgccgaggatgtaaatgtctagtttcagaatcatgcaaagctctggcttcgttatcgaatttgatagagctagacttgagttattgcaatctgatggatggagcatttctcaatgattttggcagcctaatctccttaacattgttagatttgagtggtaattgctttgcgcgattacctgaaagtatctctcaactctcaaagctcgacactctgcacttgaggaattgcggacagcttcaagtgctgcccaagaagcttccgttaagtcttcaaaacgtgtttgcagaaggatgtacatcactgacggattacccaaatcaaatcaaagtattgaattcatgggagtcgggagtgactactgtcaattccatcaattcttcagaactcggagtctcacaaagttacctaatgtcggtgattccaagtaaggagggaggatctccagagctgcatgtgacatataagcatacagtgggcaaacaagttgatcattatttacaagcggagacaaatcttttgttttctccggtgcagatgccttcctgctcagatttcattggcatatatcctagagatgaaattccagagtggttcagcactatatctaccagaaatcccatatcaatctcgatacgtcatcaaaatctggctgatgataacgagtggaagggatttgccgcgtgtgctatattctcagtcaaggggcatactgctctcacccttattgaaccggatcctgattttcttaattactcgtatcaagtcacattggaaactgatgttatgcgtctggaaccaaaagtgttggaaatggaattaggccgtcttggatcaagttctcatctgcttgtgattttctttttatctagttggaagtttccacagtgggggttaaatcgatcaactgtagtgagggctacatttgaaaccaccaatccatccatggtggtccagaaatgtggaattcgtctagtctatgagcaagatgctggatggcattccagaatattcggggaagatgatccgatttgcctgaatgaagttgaggacgacgcctctgtattggagtccggctggcttagtcaatatttggaatgggagaaattcattccacccttggaagaagaatccacactcgtgctgataaagaaccttgatagaagggattccagaaccccactggaaaaatactttgaattgcactcacgaaaatatagaaattgggactggtctgaccctcgtgctgcttattgtgccttcaagagagttgaaatctccaagttgaaatggttcatgccttttatcaaccaaggcaactctgcagaaatccaactgcctttaaatgtgttcgatgatgataattggttggggtttgcagtatatgttcagttgtcccatgaccaatatccaaacattagtcatggcagtaccactatcgattcagaggatgttgtgcttaattttcgtctggactctgatgttgcttggcacgggttatttgatctcaacatgcatttaagttttgagattagagagccatcggtattagatacgacttggttcttttatacaccgcgcactcaagtctgtagtaggatttggaggcaatgccaattggccaggataactatgtggttctctagaccatgcttagcagtgcatagttgtgcccttcgtctactatttaaggaggacgttgaacatcttgtagaaacacttaccttcgcggaattaccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

760

Amino Acids

86.29

Weight (kDa)

5.09

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 2221
AccII CGCG 4 cut(s) 712, 1223, 2119, 2270
AciI CCGC 5 cut(s) 771, 1046, 1221, 2117, 2270
AclWI GGATC 5 cut(s) 988, 1271, 1284, 1381, 1559
AcoI YGGCCR 1 cut(s) 2160
AcsI RAATTY 5 cut(s) 598, 877, 1122, 1506, 1646
AcuI CTGAAG 2 cut(s) 119, 906
AcyI GRCGYC 1 cut(s) 1596
AfaI GTAC 2 cut(s) 838, 1972
AfiI CCNNNNNNNGG 3 cut(s) 89, 955, 1430
AflIII ACRYGT 1 cut(s) 819
AjnI CCWGG 1 cut(s) 2162
AleI CACNNNNGTG 1 cut(s) 1679
Alw26I GTCTC 5 cut(s) 90, 401, 537, 940, 1043
AlwI GGATC 5 cut(s) 988, 1271, 1284, 1381, 1559
Ama87I CYCGRG 1 cut(s) 434
AoxI GGCC 2 cut(s) 1363, 2160
ApeKI GCWGC 4 cut(s) 663, 787, 991, 1787
ApoI RAATTY 5 cut(s) 598, 877, 1122, 1506, 1646
ArsI GACNNNNNNTTYG 4 cut(s) 119, 151, 1042, 1074
Asp700I GAANNNNTTC 2 cut(s) 1708, 1832
AspLEI GCGC 2 cut(s) 712, 2121
AspS9I GGNCC 2 cut(s) 270, 1492
AsuHPI GGTGA 3 cut(s) 71, 970, 1252
AsuII TTCGAA 1 cut(s) 52
AvaI CYCGRG 1 cut(s) 434
AvaII GGWCC 2 cut(s) 270, 1492
BaeGI GKGCMC 1 cut(s) 2215
BalI TGGCCA 1 cut(s) 2162
BamHI GGATCC 1 cut(s) 1276
BauI CACGAG 2 cut(s) 1679, 1782
BbsI GAAGAC 1 cut(s) 803
BbvI GCAGC 4 cut(s) 675, 774, 978, 1774
BccI CCATC 8 cut(s) 260, 301, 628, 632, 920, 1489, 1530, 2089
BceAI ACGGC 1 cut(s) 1350
BciT130I CCWGG 1 cut(s) 2164
BclI TGATCA 1 cut(s) 1030
BcoDI GTCTC 5 cut(s) 90, 401, 537, 940, 1043
BfaI CTAG 7 cut(s) 162, 560, 611, 1113, 1410, 1514, 2184
BfmI CTRYAG 4 cut(s) 527, 1449, 1863, 2131
BisI GCNGC 5 cut(s) 664, 788, 992, 1221, 1788
BlpI GCTNAGC 1 cut(s) 2194
BlsI GCNGC 5 cut(s) 665, 789, 993, 1222, 1789
Bme1390I CCNGG 1 cut(s) 2164
Bme18I GGWCC 2 cut(s) 270, 1492
BmeT110I CYCGRG 1 cut(s) 434
BmgT120I GGNCC 2 cut(s) 270, 1492
BmiI GGNNCC 4 cut(s) 27, 271, 1278, 1338
BmrFI CCNGG 1 cut(s) 2164
BmsI GCATC 3 cut(s) 364, 1068, 1519
BoxI GACNNNNGTC 1 cut(s) 902
BpiI GAAGAC 1 cut(s) 803
BplI GAGNNNNNCTC 2 cut(s) 633, 665
BpmI CTGGAG 3 cut(s) 272, 482, 969
Bpu1102I GCTNAGC 1 cut(s) 2194
Bpu14I TTCGAA 1 cut(s) 52
BpuEI CTTGAG 4 cut(s) 46, 637, 781, 2109
Bsa29I ATCGAT 2 cut(s) 1441, 1980
BsaBI GATNNNNATC 1 cut(s) 838
BsaHI GRCGYC 1 cut(s) 1596
BsaJI CCNNGG 4 cut(s) 544, 1485, 1659, 1852
BsaWI WCCGGW 2 cut(s) 1069, 1273
Bsc4I CCNNNNNNNGG 3 cut(s) 89, 955, 1430
Bse1I ACTGG 3 cut(s) 316, 1728, 1775
Bse3DI GCAATG 1 cut(s) 2156
Bse8I GATNNNNATC 1 cut(s) 838
BseBI CCWGG 1 cut(s) 2164
BseCI ATCGAT 2 cut(s) 1441, 1980
BseDI CCNNGG 4 cut(s) 544, 1485, 1659, 1852
BseGI GGATG 7 cut(s) 271, 554, 643, 839, 1481, 1541, 1996
BseJI GATNNNNATC 1 cut(s) 838
BseLI CCNNNNNNNGG 3 cut(s) 89, 955, 1430
BseMI GCAATG 1 cut(s) 2156
BseMII CTCAG 3 cut(s) 12, 1104, 1251
BseNI ACTGG 3 cut(s) 316, 1728, 1775
BseSI GKGCMC 1 cut(s) 2215
BseXI GCAGC 4 cut(s) 675, 774, 978, 1774
BsgI GTGCAG 2 cut(s) 740, 1094
Bsh1236I CGCG 4 cut(s) 712, 1223, 2119, 2270
BshFI GGCC 2 cut(s) 1365, 2162
BshVI ATCGAT 2 cut(s) 1441, 1980
BsiHKCI CYCGRG 1 cut(s) 434
BsiSI CCGG 3 cut(s) 1070, 1274, 1614
BslFI GGGAC 3 cut(s) 283, 1781, 1921
BslI CCNNNNNNNGG 3 cut(s) 89, 955, 1430
BsmAI GTCTC 5 cut(s) 90, 401, 537, 940, 1043
BsmBI CGTCTC 1 cut(s) 90
BsmFI GGGAC 3 cut(s) 283, 1781, 1921
BsmI GAATGC 1 cut(s) 1540
BsnI GGCC 2 cut(s) 1365, 2162
BsoBI CYCGRG 1 cut(s) 434
Bsp119I TTCGAA 1 cut(s) 52
Bsp1286I GDGCHC 1 cut(s) 2215
Bsp1407I TGTACA 1 cut(s) 836
Bsp143I GATC 7 cut(s) 980, 1030, 1276, 1373, 1442, 1564, 2044
Bsp1720I GCTNAGC 1 cut(s) 2194
Bsp19I CCATGG 1 cut(s) 1485
BspACI CCGC 5 cut(s) 771, 1046, 1221, 2117, 2270
BspANI GGCC 2 cut(s) 1365, 2162
BspCNI CTCAG 3 cut(s) 13, 1103, 1250
BspDI ATCGAT 2 cut(s) 1441, 1980
BspFNI CGCG 4 cut(s) 712, 1223, 2119, 2270
BspLI GGNNCC 4 cut(s) 27, 271, 1278, 1338
BspMAI CTGCAG 1 cut(s) 1867
BspPI GGATC 5 cut(s) 988, 1271, 1284, 1381, 1559
BspT104I TTCGAA 1 cut(s) 52
BsrDI GCAATG 1 cut(s) 2156
BsrGI TGTACA 1 cut(s) 836
BsrI ACTGG 3 cut(s) 316, 1728, 1775
BssECI CCNNGG 4 cut(s) 544, 1485, 1659, 1852
BssMI GATC 7 cut(s) 980, 1030, 1276, 1373, 1442, 1564, 2044
BssNI GRCGYC 1 cut(s) 1596
BssSI CACGAG 2 cut(s) 1679, 1782
BssT1I CCWWGG 3 cut(s) 1485, 1659, 1852
Bst2BI CACGAG 2 cut(s) 1679, 1782
Bst2UI CCWGG 1 cut(s) 2164
Bst4CI ACNGT 6 cut(s) 341, 531, 904, 1015, 1428, 1450
BstACI GRCGYC 1 cut(s) 1596
BstAUI TGTACA 1 cut(s) 836
BstBI TTCGAA 1 cut(s) 52
BstC8I GCNNGC 2 cut(s) 248, 1619
BstDEI CTNAG 5 cut(s) 21, 1090, 1237, 1622, 2194
BstDSI CCRYGG 1 cut(s) 1485
BstF5I GGATG 7 cut(s) 271, 554, 643, 839, 1481, 1541, 1996
BstFNI CGCG 4 cut(s) 712, 1223, 2119, 2270
BstHHI GCGC 2 cut(s) 712, 2121
BstKTI GATC 7 cut(s) 983, 1033, 1279, 1376, 1445, 1567, 2047
BstMAI GTCTC 5 cut(s) 90, 401, 537, 940, 1043
BstMBI GATC 7 cut(s) 980, 1030, 1276, 1373, 1442, 1564, 2044
BstMWI GCNNNNNNNGC 4 cut(s) 784, 796, 1226, 1796
BstNI CCWGG 1 cut(s) 2164
BstNSI RCATGY 2 cut(s) 998, 2056
BstPAI GACNNNNGTC 1 cut(s) 902
BstSCI CCNGG 1 cut(s) 2162
BstSFI CTRYAG 4 cut(s) 527, 1449, 1863, 2131
BstSLI GKGCMC 1 cut(s) 2215
BstUI CGCG 4 cut(s) 712, 1223, 2119, 2270
BstV1I GCAGC 4 cut(s) 675, 774, 978, 1774
BstV2I GAAGAC 1 cut(s) 803
BstX2I RGATCY 2 cut(s) 980, 1276
BstXI CCANNNNNNTGG 1 cut(s) 1502
BstYI RGATCY 2 cut(s) 980, 1276
Bsu15I ATCGAT 2 cut(s) 1441, 1980
BsuRI GGCC 2 cut(s) 1365, 2162
BsuTUI ATCGAT 2 cut(s) 1441, 1980
BtgI CCRYGG 1 cut(s) 1485
BtsCI GGATG 7 cut(s) 271, 554, 643, 839, 1481, 1541, 1996
BtsI GCAGTG 1 cut(s) 2205
BtsIMutI CAGTG 6 cut(s) 18, 842, 1020, 1433, 1721, 2205
Cac8I GCNNGC 2 cut(s) 248, 1619
CfoI GCGC 2 cut(s) 712, 2121
Cfr13I GGNCC 2 cut(s) 270, 1492
ClaI ATCGAT 2 cut(s) 1441, 1980
CseI GACGC 2 cut(s) 1319, 1604
Csp6I GTAC 2 cut(s) 837, 1971
CspCI CAANNNNNGTGG 2 cut(s) 51, 86
CviQI GTAC 2 cut(s) 837, 1971
DdeI CTNAG 5 cut(s) 21, 1090, 1237, 1622, 2194
DpnI GATC 7 cut(s) 982, 1032, 1278, 1375, 1444, 1566, 2046
DpnII GATC 7 cut(s) 980, 1030, 1276, 1373, 1442, 1564, 2044
DraI TTTAAA 2 cut(s) 390, 1884
EaeI YGGCCR 1 cut(s) 2160
Eco130I CCWWGG 3 cut(s) 1485, 1659, 1852
Eco47I GGWCC 2 cut(s) 270, 1492
Eco57I CTGAAG 2 cut(s) 119, 906
Eco88I CYCGRG 1 cut(s) 434
EcoRI GAATTC 2 cut(s) 877, 1506
EcoRII CCWGG 1 cut(s) 2162
EcoT14I CCWWGG 3 cut(s) 1485, 1659, 1852
EcoT22I ATGCAT 1 cut(s) 2058
ErhI CCWWGG 3 cut(s) 1485, 1659, 1852
Esp3I CGTCTC 1 cut(s) 90
FaqI GGGAC 3 cut(s) 283, 1781, 1921
FbaI TGATCA 1 cut(s) 1030
FblI GTMKAC 1 cut(s) 2221
Fnu4HI GCNGC 5 cut(s) 664, 788, 992, 1221, 1788
FokI GGATG 7 cut(s) 278, 561, 650, 846, 1468, 1548, 2003
Fsp4HI GCNGC 5 cut(s) 664, 788, 992, 1221, 1788
FspBI CTAG 7 cut(s) 162, 560, 611, 1113, 1410, 1514, 2184
GlaI GCGC 2 cut(s) 711, 2120
GluI GCNGC 5 cut(s) 664, 788, 992, 1221, 1788
GsuI CTGGAG 3 cut(s) 272, 482, 969
HaeIII GGCC 2 cut(s) 1365, 2162
HapII CCGG 3 cut(s) 1070, 1274, 1614
HgaI GACGC 2 cut(s) 1319, 1604
HhaI GCGC 2 cut(s) 712, 2121
Hin1I GRCGYC 1 cut(s) 1596
Hin6I GCGC 2 cut(s) 710, 2119
HinP1I GCGC 2 cut(s) 710, 2119
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 4 cut(s) 64, 244, 467, 797
HpaII CCGG 3 cut(s) 1070, 1274, 1614
HphI GGTGA 3 cut(s) 71, 970, 1252
Hpy166II GTNNAC 3 cut(s) 6, 79, 2222
Hpy8I GTNNAC 3 cut(s) 6, 79, 2222
Hpy99I CGWCG 1 cut(s) 1598
HpyAV CCTTC 9 cut(s) 158, 224, 824, 1092, 1204, 1698, 1810, 2225, 2275
HpyCH4III ACNGT 6 cut(s) 341, 531, 904, 1015, 1428, 1450
HpyCH4IV ACGT 3 cut(s) 819, 1177, 2238
HpyF10VI GCNNNNNNNGC 4 cut(s) 784, 796, 1226, 1796
HpyF3I CTNAG 5 cut(s) 21, 1090, 1237, 1622, 2194
HpySE526I ACGT 3 cut(s) 819, 1177, 2238
Hsp92I GRCGYC 1 cut(s) 1596
HspAI GCGC 2 cut(s) 710, 2119
Ksp22I TGATCA 1 cut(s) 1030
Kzo9I GATC 7 cut(s) 980, 1030, 1276, 1373, 1442, 1564, 2044
LmnI GCTCC 2 cut(s) 253, 641
Lsp1109I GCAGC 4 cut(s) 675, 774, 978, 1774
LweI GCATC 3 cut(s) 364, 1068, 1519
MaeI CTAG 7 cut(s) 162, 560, 611, 1113, 1410, 1514, 2184
MaeII ACGT 3 cut(s) 819, 1177, 2238
MaeIII GTNAC 4 cut(s) 895, 944, 997, 1306
MalI GATC 7 cut(s) 982, 1032, 1278, 1375, 1444, 1566, 2046
MboI GATC 7 cut(s) 980, 1030, 1276, 1373, 1442, 1564, 2044
MboII GAAGA 8 cut(s) 112, 223, 350, 803, 912, 1571, 1676, 1679
MfeI CAATTG 2 cut(s) 297, 2156
MflI RGATCY 2 cut(s) 980, 1276
MhlI GDGCHC 1 cut(s) 2215
MlsI TGGCCA 1 cut(s) 2162
MluNI TGGCCA 1 cut(s) 2162
MlyI GAGTC 4 cut(s) 896, 942, 1619, 2009
MmeI TCCRAC 4 cut(s) 306, 1329, 1394, 1897
Mox20I TGGCCA 1 cut(s) 2162
Mph1103I ATGCAT 1 cut(s) 2058
MroXI GAANNNNTTC 2 cut(s) 1708, 1832
MscI TGGCCA 1 cut(s) 2162
MseI TTAA 9 cut(s) 389, 677, 806, 1290, 1436, 1883, 2001, 2060, 2229
MslI CAYNNNNRTG 2 cut(s) 1679, 2208
Msp20I TGGCCA 1 cut(s) 2162
MspI CCGG 3 cut(s) 1070, 1274, 1614
MspR9I CCNGG 1 cut(s) 2164
MunI CAATTG 2 cut(s) 297, 2156
Mva1269I GAATGC 1 cut(s) 1540
MvaI CCWGG 1 cut(s) 2164
MvnI CGCG 4 cut(s) 712, 1223, 2119, 2270
MwoI GCNNNNNNNGC 4 cut(s) 784, 796, 1226, 1796
NcoI CCATGG 1 cut(s) 1485
NdeII GATC 7 cut(s) 980, 1030, 1276, 1373, 1442, 1564, 2044
NlaIV GGNNCC 4 cut(s) 27, 271, 1278, 1338
NmeAIII GCCGAG 1 cut(s) 569
NmuCI GTSAC 3 cut(s) 895, 997, 1306
NsiI ATGCAT 1 cut(s) 2058
NspI RCATGY 2 cut(s) 998, 2056
NspV TTCGAA 1 cut(s) 52
OliI CACNNNNGTG 1 cut(s) 1679
PctI GAATGC 1 cut(s) 1540
PdmI GAANNNNTTC 2 cut(s) 1708, 1832
PfeI GAWTC 7 cut(s) 170, 439, 569, 961, 1670, 1709, 1982
PkrI GCNGC 5 cut(s) 665, 789, 993, 1222, 1789
PleI GAGTC 4 cut(s) 895, 941, 1618, 2009
PpsI GAGTC 4 cut(s) 895, 941, 1618, 2009
PshAI GACNNNNGTC 1 cut(s) 902
Psp6I CCWGG 1 cut(s) 2162
PspGI CCWGG 1 cut(s) 2162
PspN4I GGNNCC 4 cut(s) 27, 271, 1278, 1338
PspPI GGNCC 2 cut(s) 270, 1492
PstI CTGCAG 1 cut(s) 1867
PsuI RGATCY 2 cut(s) 980, 1276
RsaI GTAC 2 cut(s) 838, 1972
RsaNI GTAC 2 cut(s) 837, 1971
RseI CAYNNNNRTG 2 cut(s) 1679, 2208
SaqAI TTAA 9 cut(s) 389, 677, 806, 1290, 1436, 1883, 2001, 2060, 2229
SatI GCNGC 5 cut(s) 664, 788, 992, 1221, 1788
Sau3AI GATC 7 cut(s) 980, 1030, 1276, 1373, 1442, 1564, 2044
Sau96I GGNCC 2 cut(s) 270, 1492
SchI GAGTC 4 cut(s) 896, 942, 1619, 2009
ScrFI CCNGG 1 cut(s) 2164
SduI GDGCHC 1 cut(s) 2215
SfaNI GCATC 3 cut(s) 364, 1068, 1519
SfcI CTRYAG 4 cut(s) 527, 1449, 1863, 2131
SfuI TTCGAA 1 cut(s) 52
SinI GGWCC 2 cut(s) 270, 1492
SmiMI CAYNNNNRTG 2 cut(s) 1679, 2208
SmlI CTYRAG 4 cut(s) 61, 616, 760, 2124
SmoI CTYRAG 4 cut(s) 61, 616, 760, 2124
SsiI CCGC 5 cut(s) 771, 1046, 1221, 2117, 2270
SspI AATATT 2 cut(s) 1551, 1631
SspMI CTAG 7 cut(s) 162, 560, 611, 1113, 1410, 1514, 2184
StyD4I CCNGG 1 cut(s) 2162
StyI CCWWGG 3 cut(s) 1485, 1659, 1852
TaaI ACNGT 6 cut(s) 341, 531, 904, 1015, 1428, 1450
TaiI ACGT 3 cut(s) 822, 1180, 2241
TaqI TCGA 8 cut(s) 52, 481, 596, 747, 1172, 1441, 1893, 1980
TatI WGTACW 1 cut(s) 836
TauI GCSGC 1 cut(s) 1223
TfiI GAWTC 7 cut(s) 170, 439, 569, 961, 1670, 1709, 1982
Tru1I TTAA 9 cut(s) 389, 677, 806, 1290, 1436, 1883, 2001, 2060, 2229
Tru9I TTAA 9 cut(s) 389, 677, 806, 1290, 1436, 1883, 2001, 2060, 2229
TscAI CASTG 6 cut(s) 25, 849, 1020, 1433, 1728, 2205
TseFI GTSAC 3 cut(s) 895, 997, 1306
TseI GCWGC 4 cut(s) 663, 787, 991, 1787
Tsp45I GTSAC 3 cut(s) 895, 997, 1306
TspGWI ACGGA 2 cut(s) 792, 863
TspRI CASTG 6 cut(s) 25, 849, 1020, 1433, 1728, 2205
VpaK11BI GGWCC 2 cut(s) 270, 1492
XapI RAATTY 5 cut(s) 598, 877, 1122, 1506, 1646
XbaI TCTAGA 1 cut(s) 2183
XceI RCATGY 2 cut(s) 998, 2056
XcmI CCANNNNNNNNNTGG 2 cut(s) 1483, 1720
XmiI GTMKAC 1 cut(s) 2221
XmnI GAANNNNTTC 2 cut(s) 1708, 1832
XspI CTAG 7 cut(s) 162, 560, 611, 1113, 1410, 1514, 2184
Zsp2I ATGCAT 1 cut(s) 2058
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.