Rw7G041630

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
65073857 .. 65074444
588 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G041630.1

Sequence Viewer

Length: 429 bp
ATGCAAAGGGAAGATTCTCTTAAATCTTACGATAAGTTGGAGGTAAAAGAATGGATAAATTTGATACAATTGCAAGGTGCCCTTTCATTAGAGAGAGTGACAGAACGGGATTCCAGAACCCCATGGGAAAAATACTTTGAATTGCACTCACGAAAATATAGAAATTGGGATTGGTCTGACCCTCGTCCTGTAATTTGTTGTGGCTTCAAGAGAGCTGAAATTTACAAGTGGAAATGGTTCATGCCTTTCATCAAACAAGGCAACTCTGCAGAAATCCAACTGCCTCTGAATCTGTTCGATGATGATAATTGGTTGGGGTTTGCCGTATGTTTTCAGTTAGAATGCATGTTGTGCTTAATTATAGTCTGGAATCTGATGTTGCTTGGCACGGCTTATTTGATTTCACGATGCATGCAGATATTAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

142

Amino Acids

17.18

Weight (kDa)

7.55

Isoelectric Point (pI)

41.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 77
AcsI RAATTY 2 cut(s) 58, 219
AgsI TTSAA 2 cut(s) 140, 208
AjuI GAANNNNNNNTTGG 2 cut(s) 154, 186
AluBI AGCT 1 cut(s) 215
AluI AGCT 1 cut(s) 215
ApoI RAATTY 2 cut(s) 58, 219
Asp700I GAANNNNTTC 2 cut(s) 236, 293
BaeGI GKGCMC 1 cut(s) 82
BanI GGYRCC 1 cut(s) 77
BceAI ACGGC 2 cut(s) 308, 405
BfmI CTRYAG 1 cut(s) 267
BmiI GGNNCC 1 cut(s) 79
BmsI GCATC 1 cut(s) 398
BoxI GACNNNNGTC 1 cut(s) 183
BsaJI CCNNGG 1 cut(s) 122
BseDI CCNNGG 1 cut(s) 122
BseSI GKGCMC 1 cut(s) 82
BshNI GGYRCC 1 cut(s) 77
BsmI GAATGC 1 cut(s) 347
Bsp1286I GDGCHC 1 cut(s) 82
Bsp19I CCATGG 1 cut(s) 122
BspLI GGNNCC 1 cut(s) 79
BspMAI CTGCAG 1 cut(s) 271
BspT107I GGYRCC 1 cut(s) 77
BssECI CCNNGG 1 cut(s) 122
BssT1I CCWWGG 1 cut(s) 122
BstAPI GCANNNNNTGC 1 cut(s) 351
BstC8I GCNNGC 1 cut(s) 413
BstDSI CCRYGG 1 cut(s) 122
BstMWI GCNNNNNNNGC 1 cut(s) 351
BstNSI RCATGY 2 cut(s) 349, 415
BstPAI GACNNNNGTC 1 cut(s) 183
BstSFI CTRYAG 1 cut(s) 267
BstSLI GKGCMC 1 cut(s) 82
BtgI CCRYGG 1 cut(s) 122
Cac8I GCNNGC 1 cut(s) 413
CviAII CATG 4 cut(s) 123, 241, 346, 412
CviJI RGCY 3 cut(s) 204, 215, 392
CviKI_1 RGCY 3 cut(s) 204, 215, 392
Eco130I CCWWGG 1 cut(s) 122
EcoT14I CCWWGG 1 cut(s) 122
EcoT22I ATGCAT 2 cut(s) 347, 413
ErhI CCWWGG 1 cut(s) 122
FaeI CATG 4 cut(s) 126, 244, 349, 415
FaiI YATR 7 cut(s) 124, 159, 242, 328, 347, 362, 413
FalI AAGNNNNNCTT 3 cut(s) 35, 66, 98
FatI CATG 4 cut(s) 122, 240, 345, 411
Hin1II CATG 4 cut(s) 126, 244, 349, 415
HinfI GANTC 4 cut(s) 14, 110, 289, 370
Hpy188I TCNGA 3 cut(s) 178, 288, 375
Hpy188III TCNNGA 5 cut(s) 114, 150, 208, 367, 405
HpyCH4V TGCA 7 cut(s) 4, 73, 145, 269, 345, 411, 415
HpyF10VI GCNNNNNNNGC 1 cut(s) 351
Hsp92II CATG 4 cut(s) 126, 244, 349, 415
LpnPI CCDG 3 cut(s) 127, 201, 352
LweI GCATC 1 cut(s) 398
MaeIII GTNAC 1 cut(s) 97
MboII GAAGA 1 cut(s) 23
MfeI CAATTG 1 cut(s) 68
MhlI GDGCHC 1 cut(s) 82
MluCI AATT 8 cut(s) 58, 68, 140, 163, 192, 219, 307, 357
MmeI TCCRAC 2 cut(s) 18, 301
MnlI CCTC 3 cut(s) 34, 192, 294
Mph1103I ATGCAT 2 cut(s) 347, 413
MroXI GAANNNNTTC 2 cut(s) 236, 293
MseI TTAA 3 cut(s) 21, 356, 422
MunI CAATTG 1 cut(s) 68
Mva1269I GAATGC 1 cut(s) 347
MwoI GCNNNNNNNGC 1 cut(s) 351
NcoI CCATGG 1 cut(s) 122
NlaIII CATG 4 cut(s) 126, 244, 349, 415
NlaIV GGNNCC 1 cut(s) 79
NmuCI GTSAC 1 cut(s) 97
NsiI ATGCAT 2 cut(s) 347, 413
NspI RCATGY 2 cut(s) 349, 415
PaeI GCATGC 1 cut(s) 415
PctI GAATGC 1 cut(s) 347
PdmI GAANNNNTTC 2 cut(s) 236, 293
PfeI GAWTC 4 cut(s) 14, 110, 289, 370
PshAI GACNNNNGTC 1 cut(s) 183
PspN4I GGNNCC 1 cut(s) 79
PstI CTGCAG 1 cut(s) 271
SaqAI TTAA 3 cut(s) 21, 356, 422
SduI GDGCHC 1 cut(s) 82
SetI ASST 3 cut(s) 45, 79, 217
SfaNI GCATC 1 cut(s) 398
SfcI CTRYAG 1 cut(s) 267
SphI GCATGC 1 cut(s) 415
Sse9I AATT 8 cut(s) 58, 68, 140, 163, 192, 219, 307, 357
StyI CCWWGG 1 cut(s) 122
TaqI TCGA 1 cut(s) 297
TasI AATT 8 cut(s) 58, 68, 140, 163, 192, 219, 307, 357
TfiI GAWTC 4 cut(s) 14, 110, 289, 370
Tru1I TTAA 3 cut(s) 21, 356, 422
Tru9I TTAA 3 cut(s) 21, 356, 422
TseFI GTSAC 1 cut(s) 97
Tsp45I GTSAC 1 cut(s) 97
TspDTI ATGAA 3 cut(s) 75, 229, 238
XapI RAATTY 2 cut(s) 58, 219
XceI RCATGY 2 cut(s) 349, 415
XmnI GAANNNNTTC 2 cut(s) 236, 293
Zsp2I ATGCAT 2 cut(s) 347, 413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.