Rmu_sc0023716.1_g000001

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0023716.1
OG0000129
Physical Location & Seq
Forward (+)
490 .. 3597
3108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0023716.1_g000001.1.cds

Sequence Viewer

Length: 2502 bp
atggattctcacctgaatgaaatgttttcgtacttagacattgggtgtcctgatgttcgtatcatagggatttgtggtatgggtggtatcggtaagacaactattgcacaagtggtttttgaaagggtacaggcccagtttgaaggttgcagctttcttgagaatgttagagaggtaattgaaaagcaaggtgcggttcatttacaacagcaacttctttcggatttgctgggaggtagtgtaaaatataatgtacagaacactagaatgggaaaaaatataatgaggcagaggctacattctaaaatggttcttatcattcttgatgatgtggaccaagaagaacaattggaagcattgtgtgatagggaattgtttggtccagggagtagaatcatcataactactagagatgaacatttgctcgaggcagttgacggagataaagtatataaggtgaatccattaactgatgctgaagctcttgagctcttccgtatgaaagcctttaagaaagaccagccggttggggaagattttctcgagctatccaaggaatttttgaaatatgctaatggccttccattagctattaaagttttgggttcctctgttcgtggtagatgtgtaaaattatggtctagtgcattggagagacttaaaaaaaatcctccaaaagggattattgatgttcttaaagttagtttcgatggattagaagaaaccgaacaggagatatttttggacatcgcatgtttctttaaaggggggtacatagatcatgtaacaagaatactacaaggtagtgaccattgtccggacattgatatagcagttctcatagagaaatctttggtaactctgtttggaagaaaattggggatgcatgacttggtacaagaattgggtcgggaaattgttcgccaaaaatgccgtgaagagcctgaaaaacgtagcaggttgtggcttcccaatgaaatcatccatgtacttcgtcagagcgaggcgatgagtgcaattcaaagcatatccctccaatgtccaacgggagacaatgttggtcactcaattgataatgacttcccaaaaatggacagattgaggttgctcaagatttggaatttgaagtgtaccggaaacatcagatatctttctaatgagttgcagtatcttgaatggcatgagtgtcctttggtttctttcccgtcagattttcaaccggataaacttgtggaagttcacatgtatttcagccgcatcgaacaactatggaggggggaaaaaggatggagcatgctacgacatttagatttgagtggttcaccatacttgaagtcgactccagacttcactgaggttccagatcttgaaaagttggtgcttcaattttgtacgagcttggtggaggttcacccgtctcttggatctctgaagaaacttgtctctttgaatatgacacattgcaagtctgttgagagcattccacctttcactgcccttgaattccttcaaatattaaggctttcatcctgttcagcactgaagaagtttccagaaattgaaggaaatatgaaaagcttgctggagcttcatttggatgggaccagcattgaggaattgcctccatcaattgaacgcttgactggtctgaccatgttgaatctaacagactgtaaaaaccttttgcatctacccaataccattgggtgtttgacatctttgaaaagtctctatctagcaggttgctccaaaattgatgagatgcctgagaatctgagtggtattaaatgtctggagaagcttttcattggtggaacttgcataagggagttatctttcattgtaggcatgaagaatctgcagtatctatcctgccgaggatgtaaaagtttagtttcagaatcatggaaaggtctgtcttcgttatcgagtttgatagagctagacttgagttattgcaatctgatcgatggagcaattctcaatgatcttagcagcctaatctccttaagaaggttggatttaagtggtaattgttttgtgcaattacctgaaagtatctctcaactctcaaagctcgagaccctggacttgagtaattgcagacagcttcaattgctgcccaagaagcttccgttaagtcttcaattcgtgtatgcaaaagattgtacttcactgacagattacccaaatcaaatcgaagtattgactccattggattcgggagtgactaccgtcaattccctcaattcttcagcacttggagtctcagaaatttccagaagctgggtgcttccaagaaatgaagtggaatctccacagctgcgtttgagacatcggcatacagatggcaaacaagttgatcattatttgcccctgagaagcctgtcgcttccaatagaaaaagaattgcagatatcttccagttcaaatttcactttccaacttccaagagatgaaattccagagtgtcaaggggcatactgctctctcccttattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

833

Amino Acids

93.91

Weight (kDa)

5.69

Isoelectric Point (pI)

48.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 948, 1730
AccB7I CCANNNNNTGG 1 cut(s) 2286
AccI GTMKAC 1 cut(s) 1337
AccIII TCCGGA 1 cut(s) 817
AciI CCGC 2 cut(s) 194, 1255
AclWI GGATC 1 cut(s) 1432
AcsI RAATTY 6 cut(s) 557, 1120, 1502, 2274, 2431, 2460
AcuI CTGAAG 4 cut(s) 498, 1451, 1562, 2238
AfaI GTAC 9 cut(s) 32, 129, 255, 773, 897, 990, 1132, 1393, 2170
AfiI CCNNNNNNNGG 6 cut(s) 677, 817, 1090, 1421, 2013, 2286
AflII CTTAAG 1 cut(s) 2008
AflIII ACRYGT 1 cut(s) 1242
AjnI CCWGG 2 cut(s) 382, 2085
Alw21I GWGCWC 1 cut(s) 492
Alw26I GTCTC 8 cut(s) 649, 1044, 1422, 1447, 1733, 2075, 2272, 2326
AlwI GGATC 1 cut(s) 1432
AlwNI CAGNNNCTG 1 cut(s) 2286
Ama87I CYCGRG 3 cut(s) 425, 542, 2078
Aor13HI TCCGGA 1 cut(s) 817
AoxI GGCC 2 cut(s) 132, 577
ApeKI GCWGC 4 cut(s) 150, 1995, 2119, 2323
ApoI RAATTY 6 cut(s) 557, 1120, 1502, 2274, 2431, 2460
Asp700I GAANNNNTTC 4 cut(s) 537, 918, 1506, 1802
AspS9I GGNCC 4 cut(s) 133, 334, 380, 1602
AsuHPI GGTGA 3 cut(s) 469, 1314, 1403
AvaI CYCGRG 3 cut(s) 425, 542, 2078
AvaII GGWCC 3 cut(s) 334, 380, 1602
BanII GRGCYC 1 cut(s) 492
BbsI GAAGAC 2 cut(s) 1911, 2135
Bbv12I GWGCWC 1 cut(s) 492
BbvI GCAGC 4 cut(s) 162, 2007, 2106, 2310
BccI CCATC 6 cut(s) 704, 1281, 1592, 1633, 1964, 2342
BceAI ACGGC 1 cut(s) 918
BcgI CGANNNNNNTGC 2 cut(s) 1948, 1982
BciT130I CCWGG 2 cut(s) 384, 2087
BclI TGATCA 1 cut(s) 2362
BcoDI GTCTC 8 cut(s) 649, 1044, 1422, 1447, 1733, 2075, 2272, 2326
BfaI CTAG 5 cut(s) 264, 408, 642, 1736, 1943
BfmI CTRYAG 1 cut(s) 1859
BfrI CTTAAG 1 cut(s) 2008
BfuAI ACCTGC 2 cut(s) 948, 1730
BglII AGATCT 1 cut(s) 1363
BisI GCNGC 5 cut(s) 151, 1255, 1996, 2120, 2324
BlsI GCNGC 5 cut(s) 152, 1256, 1997, 2121, 2325
Bme1390I CCNGG 2 cut(s) 384, 2087
Bme18I GGWCC 3 cut(s) 334, 380, 1602
BmeT110I CYCGRG 3 cut(s) 425, 542, 2078
BmgT120I GGNCC 4 cut(s) 133, 334, 380, 1602
BmiI GGNNCC 3 cut(s) 607, 1359, 1603
BmrFI CCNGG 2 cut(s) 384, 2087
BmrI ACTGGG 1 cut(s) 130
BmsI GCATC 5 cut(s) 463, 873, 1266, 1696, 1752
BmuI ACTGGG 1 cut(s) 130
BoxI GACNNNNGTC 2 cut(s) 813, 2234
BpiI GAAGAC 2 cut(s) 1911, 2135
BplI GAGNNNNNCTC 2 cut(s) 1965, 1997
BpmI CTGGAG 3 cut(s) 1326, 1604, 1814
BpuEI CTTGAG 5 cut(s) 179, 506, 1094, 1969, 2113
Bsa29I ATCGAT 1 cut(s) 1968
BsaI GGTCTC 1 cut(s) 2075
BsaJI CCNNGG 4 cut(s) 383, 552, 1876, 2085
BsaWI WCCGGW 3 cut(s) 817, 1133, 1219
BsaXI ACNNNNNCTCC 6 cut(s) 225, 255, 432, 462, 1041, 1071
Bsc4I CCNNNNNNNGG 6 cut(s) 677, 817, 1090, 1421, 2013, 2286
Bse118I RCCGGY 1 cut(s) 523
Bse1I ACTGG 3 cut(s) 136, 1648, 2424
Bse3DI GCAATG 1 cut(s) 1459
BseAI TCCGGA 1 cut(s) 817
BseBI CCWGG 2 cut(s) 384, 2087
BseCI ATCGAT 1 cut(s) 1968
BseDI CCNNGG 4 cut(s) 383, 552, 1876, 2085
BseGI GGATG 6 cut(s) 888, 981, 1292, 1526, 1603, 1886
BseLI CCNNNNNNNGG 6 cut(s) 677, 817, 1090, 1421, 2013, 2286
BseMI GCAATG 1 cut(s) 1459
BseMII CTCAG 5 cut(s) 1344, 1758, 1766, 2283, 2369
BseNI ACTGG 3 cut(s) 136, 1648, 2424
BseXI GCAGC 4 cut(s) 162, 2007, 2106, 2310
BseYI CCCAGC 2 cut(s) 229, 2286
BshFI GGCC 2 cut(s) 134, 579
BshVI ATCGAT 1 cut(s) 1968
BsiHKAI GWGCWC 1 cut(s) 492
BsiHKCI CYCGRG 3 cut(s) 425, 542, 2078
BsiSI CCGG 4 cut(s) 524, 818, 1134, 1220
BslFI GGGAC 1 cut(s) 1615
BslI CCNNNNNNNGG 6 cut(s) 677, 817, 1090, 1421, 2013, 2286
BsmAI GTCTC 8 cut(s) 649, 1044, 1422, 1447, 1733, 2075, 2272, 2326
BsmBI CGTCTC 1 cut(s) 1422
BsmFI GGGAC 1 cut(s) 1615
BsmI GAATGC 1 cut(s) 1479
BsnI GGCC 2 cut(s) 134, 579
Bso31I GGTCTC 1 cut(s) 2075
BsoBI CYCGRG 3 cut(s) 425, 542, 2078
Bsp1286I GDGCHC 1 cut(s) 492
Bsp13I TCCGGA 1 cut(s) 817
Bsp1407I TGTACA 1 cut(s) 253
Bsp143I GATC 6 cut(s) 778, 1363, 1424, 1965, 1987, 2362
BspACI CCGC 2 cut(s) 194, 1255
BspANI GGCC 2 cut(s) 134, 579
BspCNI CTCAG 5 cut(s) 1345, 1759, 1767, 2282, 2370
BspDI ATCGAT 1 cut(s) 1968
BspEI TCCGGA 1 cut(s) 817
BspLI GGNNCC 3 cut(s) 607, 1359, 1603
BspMAI CTGCAG 1 cut(s) 1863
BspMI ACCTGC 2 cut(s) 948, 1730
BspPI GGATC 1 cut(s) 1432
BspQI GCTCTTC 2 cut(s) 497, 933
BspTI CTTAAG 1 cut(s) 2008
BspTNI GGTCTC 1 cut(s) 2075
BsrDI GCAATG 1 cut(s) 1459
BsrFI RCCGGY 1 cut(s) 523
BsrGI TGTACA 1 cut(s) 253
BsrI ACTGG 3 cut(s) 136, 1648, 2424
BssAI RCCGGY 1 cut(s) 523
BssECI CCNNGG 4 cut(s) 383, 552, 1876, 2085
BssMI GATC 6 cut(s) 778, 1363, 1424, 1965, 1987, 2362
BssT1I CCWWGG 1 cut(s) 552
Bst2UI CCWGG 2 cut(s) 384, 2087
Bst4CI ACNGT 2 cut(s) 1673, 2236
Bst6I CTCTTC 2 cut(s) 497, 933
BstAFI CTTAAG 1 cut(s) 2008
BstAUI TGTACA 1 cut(s) 253
BstC8I GCNNGC 2 cut(s) 1295, 1580
BstDEI CTNAG 7 cut(s) 34, 1353, 1767, 1775, 1991, 2269, 2378
BstENI CCTNNNNNAGG 2 cut(s) 675, 2011
BstF5I GGATG 6 cut(s) 888, 981, 1292, 1526, 1603, 1886
BstKTI GATC 6 cut(s) 781, 1366, 1427, 1968, 1990, 2365
BstMAI GTCTC 8 cut(s) 649, 1044, 1422, 1447, 1733, 2075, 2272, 2326
BstMBI GATC 6 cut(s) 778, 1363, 1424, 1965, 1987, 2362
BstMWI GCNNNNNNNGC 4 cut(s) 930, 1013, 2116, 2128
BstNI CCWGG 2 cut(s) 384, 2087
BstNSI RCATGY 3 cut(s) 756, 1246, 1297
BstPAI GACNNNNGTC 2 cut(s) 813, 2234
BstSCI CCNGG 2 cut(s) 382, 2085
BstSFI CTRYAG 1 cut(s) 1859
BstV1I GCAGC 4 cut(s) 162, 2007, 2106, 2310
BstV2I GAAGAC 2 cut(s) 1911, 2135
BstX2I RGATCY 2 cut(s) 1363, 1424
BstXI CCANNNNNNTGG 1 cut(s) 527
BstYI RGATCY 2 cut(s) 1363, 1424
Bsu15I ATCGAT 1 cut(s) 1968
BsuRI GGCC 2 cut(s) 134, 579
BsuTUI ATCGAT 1 cut(s) 1968
BtgZI GCGATG 2 cut(s) 733, 1022
BtsCI GGATG 6 cut(s) 888, 981, 1292, 1526, 1603, 1886
BtsI GCAGTG 1 cut(s) 1491
BtsIMutI CAGTG 4 cut(s) 1350, 1491, 1538, 2174
BveI ACCTGC 2 cut(s) 948, 1730
Cac8I GCNNGC 2 cut(s) 1295, 1580
CaiI CAGNNNCTG 1 cut(s) 2286
Cfr10I RCCGGY 1 cut(s) 523
Cfr13I GGNCC 4 cut(s) 133, 334, 380, 1602
ClaI ATCGAT 1 cut(s) 1968
Csp6I GTAC 9 cut(s) 31, 128, 254, 772, 896, 989, 1131, 1392, 2169
CviQI GTAC 9 cut(s) 31, 128, 254, 772, 896, 989, 1131, 1392, 2169
DdeI CTNAG 7 cut(s) 34, 1353, 1767, 1775, 1991, 2269, 2378
DpnI GATC 6 cut(s) 780, 1365, 1426, 1967, 1989, 2364
DpnII GATC 6 cut(s) 778, 1363, 1424, 1965, 1987, 2362
DraI TTTAAA 1 cut(s) 763
Eam1104I CTCTTC 2 cut(s) 497, 933
EarI CTCTTC 2 cut(s) 497, 933
Ecl136II GAGCTC 1 cut(s) 490
Eco130I CCWWGG 1 cut(s) 552
Eco24I GRGCYC 1 cut(s) 492
Eco31I GGTCTC 1 cut(s) 2075
Eco32I GATATC 2 cut(s) 1148, 2418
Eco47I GGWCC 3 cut(s) 334, 380, 1602
Eco53kI GAGCTC 1 cut(s) 490
Eco57I CTGAAG 4 cut(s) 498, 1451, 1562, 2238
Eco88I CYCGRG 3 cut(s) 425, 542, 2078
EcoICRI GAGCTC 1 cut(s) 490
EcoNI CCTNNNNNAGG 2 cut(s) 675, 2011
EcoRI GAATTC 1 cut(s) 1502
EcoRII CCWGG 2 cut(s) 382, 2085
EcoRV GATATC 2 cut(s) 1148, 2418
EcoT14I CCWWGG 1 cut(s) 552
EcoT22I ATGCAT 1 cut(s) 888
EcoT38I GRGCYC 1 cut(s) 492
ErhI CCWWGG 1 cut(s) 552
Esp3I CGTCTC 1 cut(s) 1422
FaqI GGGAC 1 cut(s) 1615
FbaI TGATCA 1 cut(s) 2362
FblI GTMKAC 1 cut(s) 1337
Fnu4HI GCNGC 5 cut(s) 151, 1255, 1996, 2120, 2324
FokI GGATG 6 cut(s) 895, 968, 1299, 1513, 1610, 1893
FriOI GRGCYC 1 cut(s) 492
Fsp4HI GCNGC 5 cut(s) 151, 1255, 1996, 2120, 2324
FspBI CTAG 5 cut(s) 264, 408, 642, 1736, 1943
GluI GCNGC 5 cut(s) 151, 1255, 1996, 2120, 2324
GsaI CCCAGC 2 cut(s) 233, 2290
GsuI CTGGAG 3 cut(s) 1326, 1604, 1814
HaeIII GGCC 2 cut(s) 134, 579
HapII CCGG 4 cut(s) 524, 818, 1134, 1220
HincII GTYRAC 2 cut(s) 436, 1338
HindII GTYRAC 2 cut(s) 436, 1338
HindIII AAGCTT 3 cut(s) 1576, 1799, 2129
HpaII CCGG 4 cut(s) 524, 818, 1134, 1220
HphI GGTGA 3 cut(s) 469, 1314, 1403
Hpy166II GTNNAC 7 cut(s) 334, 436, 1131, 1240, 1322, 1338, 1411
Hpy8I GTNNAC 7 cut(s) 334, 436, 1131, 1240, 1322, 1338, 1411
HpyAV CCTTC 5 cut(s) 137, 590, 1517, 1556, 2007
HpyCH4III ACNGT 2 cut(s) 1673, 2236
HpyCH4IV ACGT 1 cut(s) 952
HpyF10VI GCNNNNNNNGC 4 cut(s) 930, 1013, 2116, 2128
HpyF3I CTNAG 7 cut(s) 34, 1353, 1767, 1775, 1991, 2269, 2378
HpySE526I ACGT 1 cut(s) 952
Kpn2I TCCGGA 1 cut(s) 817
Ksp22I TGATCA 1 cut(s) 2362
Kzo9I GATC 6 cut(s) 778, 1363, 1424, 1965, 1987, 2362
LguI GCTCTTC 2 cut(s) 497, 933
LmnI GCTCC 4 cut(s) 1290, 1585, 1751, 1973
Lsp1109I GCAGC 4 cut(s) 162, 2007, 2106, 2310
LweI GCATC 5 cut(s) 463, 873, 1266, 1696, 1752
MaeI CTAG 5 cut(s) 264, 408, 642, 1736, 1943
MaeII ACGT 1 cut(s) 952
MaeIII GTNAC 5 cut(s) 784, 806, 856, 1061, 2227
MalI GATC 6 cut(s) 780, 1365, 1426, 1967, 1989, 2364
MboI GATC 6 cut(s) 778, 1363, 1424, 1965, 1987, 2362
MfeI CAATTG 4 cut(s) 347, 1068, 1629, 2114
MflI RGATCY 2 cut(s) 1363, 1424
MhlI GDGCHC 1 cut(s) 492
MlyI GAGTC 3 cut(s) 1333, 2203, 2274
MmeI TCCRAC 3 cut(s) 1067, 1998, 2467
Mph1103I ATGCAT 1 cut(s) 888
MroI TCCGGA 1 cut(s) 817
MroXI GAANNNNTTC 4 cut(s) 537, 918, 1506, 1802
MslI CAYNNNNRTG 4 cut(s) 15, 266, 1596, 2346
MspA1I CMGCKG 1 cut(s) 2323
MspCI CTTAAG 1 cut(s) 2008
MspI CCGG 4 cut(s) 524, 818, 1134, 1220
MspR9I CCNGG 2 cut(s) 384, 2087
MunI CAATTG 4 cut(s) 347, 1068, 1629, 2114
Mva1269I GAATGC 1 cut(s) 1479
MvaI CCWGG 2 cut(s) 384, 2087
MwoI GCNNNNNNNGC 4 cut(s) 930, 1013, 2116, 2128
NdeII GATC 6 cut(s) 778, 1363, 1424, 1965, 1987, 2362
NlaIV GGNNCC 3 cut(s) 607, 1359, 1603
NmeAIII GCCGAG 1 cut(s) 1901
NmuCI GTSAC 3 cut(s) 806, 1061, 2227
NsiI ATGCAT 1 cut(s) 888
NspI RCATGY 3 cut(s) 756, 1246, 1297
PaeI GCATGC 1 cut(s) 1297
PaeR7I CTCGAG 3 cut(s) 425, 542, 2078
PciI ACATGT 1 cut(s) 1242
PciSI GCTCTTC 2 cut(s) 497, 933
PctI GAATGC 1 cut(s) 1479
PdmI GAANNNNTTC 4 cut(s) 537, 918, 1506, 1802
PfeI GAWTC 9 cut(s) 5, 393, 460, 1660, 1771, 1855, 1901, 2219, 2312
PflMI CCANNNNNTGG 1 cut(s) 2286
PkrI GCNGC 5 cut(s) 152, 1256, 1997, 2121, 2325
PleI GAGTC 3 cut(s) 1333, 2203, 2273
PpsI GAGTC 3 cut(s) 1333, 2203, 2273
PscI ACATGT 1 cut(s) 1242
PshAI GACNNNNGTC 2 cut(s) 813, 2234
Psp124BI GAGCTC 1 cut(s) 492
Psp6I CCWGG 2 cut(s) 382, 2085
PspFI CCCAGC 2 cut(s) 229, 2286
PspGI CCWGG 2 cut(s) 382, 2085
PspN4I GGNNCC 3 cut(s) 607, 1359, 1603
PspPI GGNCC 4 cut(s) 133, 334, 380, 1602
PspXI VCTCGAGB 1 cut(s) 425
PstI CTGCAG 1 cut(s) 1863
PstNI CAGNNNCTG 1 cut(s) 2286
PsuI RGATCY 2 cut(s) 1363, 1424
PvuII CAGCTG 1 cut(s) 2323
RsaI GTAC 9 cut(s) 32, 129, 255, 773, 897, 990, 1132, 1393, 2170
RsaNI GTAC 9 cut(s) 31, 128, 254, 772, 896, 989, 1131, 1392, 2169
RseI CAYNNNNRTG 4 cut(s) 15, 266, 1596, 2346
SacI GAGCTC 1 cut(s) 492
SalI GTCGAC 1 cut(s) 1336
SapI GCTCTTC 2 cut(s) 497, 933
SatI GCNGC 5 cut(s) 151, 1255, 1996, 2120, 2324
Sau3AI GATC 6 cut(s) 778, 1363, 1424, 1965, 1987, 2362
Sau96I GGNCC 4 cut(s) 133, 334, 380, 1602
SchI GAGTC 3 cut(s) 1333, 2203, 2274
ScrFI CCNGG 2 cut(s) 384, 2087
SduI GDGCHC 1 cut(s) 492
SfaNI GCATC 5 cut(s) 463, 873, 1266, 1696, 1752
SfcI CTRYAG 1 cut(s) 1859
Sfr274I CTCGAG 3 cut(s) 425, 542, 2078
SinI GGWCC 3 cut(s) 334, 380, 1602
SlaI CTCGAG 3 cut(s) 425, 542, 2078
SmiMI CAYNNNNRTG 4 cut(s) 15, 266, 1596, 2346
SmlI CTYRAG 9 cut(s) 158, 425, 485, 542, 1109, 1948, 2008, 2078, 2092
SmoI CTYRAG 9 cut(s) 158, 425, 485, 542, 1109, 1948, 2008, 2078, 2092
SphI GCATGC 1 cut(s) 1297
SsiI CCGC 2 cut(s) 194, 1255
SspI AATATT 1 cut(s) 1515
SspMI CTAG 5 cut(s) 264, 408, 642, 1736, 1943
SstI GAGCTC 1 cut(s) 492
StyD4I CCNGG 2 cut(s) 382, 2085
StyI CCWWGG 1 cut(s) 552
TaaI ACNGT 2 cut(s) 1673, 2236
TaiI ACGT 1 cut(s) 955
TaqI TCGA 9 cut(s) 426, 543, 708, 1260, 1337, 1928, 1968, 2079, 2199
TatI WGTACW 3 cut(s) 253, 988, 2168
TauI GCSGC 1 cut(s) 1257
TfiI GAWTC 9 cut(s) 5, 393, 460, 1660, 1771, 1855, 1901, 2219, 2312
TscAI CASTG 4 cut(s) 1357, 1498, 1545, 2181
TseFI GTSAC 3 cut(s) 806, 1061, 2227
TseI GCWGC 4 cut(s) 150, 1995, 2119, 2323
Tsp45I GTSAC 3 cut(s) 806, 1061, 2227
TspGWI ACGGA 3 cut(s) 453, 485, 2124
TspRI CASTG 4 cut(s) 1357, 1498, 1545, 2181
Van91I CCANNNNNTGG 1 cut(s) 2286
Vha464I CTTAAG 1 cut(s) 2008
VpaK11BI GGWCC 3 cut(s) 334, 380, 1602
XagI CCTNNNNNAGG 2 cut(s) 675, 2011
XapI RAATTY 6 cut(s) 557, 1120, 1502, 2274, 2431, 2460
XceI RCATGY 3 cut(s) 756, 1246, 1297
XhoI CTCGAG 3 cut(s) 425, 542, 2078
XmiI GTMKAC 1 cut(s) 1337
XmnI GAANNNNTTC 4 cut(s) 537, 918, 1506, 1802
XspI CTAG 5 cut(s) 264, 408, 642, 1736, 1943
Zsp2I ATGCAT 1 cut(s) 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.