Rmu_sc0001921.1_g000015

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001921.1
OG0000129
Physical Location & Seq
Forward (+)
84212 .. 87561
3350 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001921.1_g000015.1.cds

Sequence Viewer

Length: 2937 bp
atgctacggcttatcgacatgagtggtgcacaatacttgaagtcaactccagacttcactgaggttcctgatcttgaaacgttggtgcttcaatattgtacaagcttgttggaggttcacccgtctcttggatttctgaagaagcttattaatttgaatatgacatgttgcaagtctattaagagcattccacctttcactgccttggaatcccttcaaatattgaggttttcattctgttcaggactgaagaagtttccagaaattaaaggaaatatgaaaagcttgctggagcttcatttggatgggaccaacattgaggaattgcctccatcaattgaacgcttgactggtcttaccatgttgaatctaacagactgtaaaaaccttttgcatcttcccaatgacattgggtgcttgacatctttgaaaagtctctatcttacaggttgctccaaaattgatgagataccagagaatctgaatggtatgaaatgtctggagaagcttgcaattggtgggacttccataagggagttatctttcattctaggcatgaagaatctacagtatctatcctgccaaggatgtaaatatctagttccagaatcatgcaaaggtctggcttcattgtcgaatttgatacagctagacttaagttattgcaatctgatggatggagcaattctcaatgattttagcagcctattcttcttaacattgttagatttaagtggtaattgctttgtgcgattacctgaaagtatctctcaactctcaaagctcgagactctgcgcttgagtaattgcagacagcttcaattgctgcccaagaagcttccgttaagtcttcaatacctgtatgcagaacaatgtacttcactgacagattacccaaatcaaatcaaagtattgaattcatcggagtcgggagtgactattgtcaattccctcaattcttcagcacctggagacttacaaagttccacaatgtttacttttccaagaactgagggggaatctttccaactgcatttgacatataagcatacagagggaaaacaagttgatcatttgccactgagaactctagtgcatctaaaacaaatgcctttcgggtcaaatttcagtagcatatatcctacagatgaaattccagagtggttcagcactgtatctaccagaaatcccatatcaatctcgatacctcaaaatctggcagatgatgacaagtggaagggatttgccgcgtgtgccatattctcagtcaaggggcatactgatctctcccttattgaaccggatcctaattttcttaattactcgtatcaaatcacatttgaaactgatgttttgcgtctggaaccatatgtgttggagtggtatgaagcacgccgcccccttggatcaatttctcatctgcttatgattttctatatatctcgttccgaggttccacagagggggtttaatcaatcaactgtggtgagggctatgtttgaaaccaccaatgcatccatggtggtccagaaatgtggaattcgtctagtctatgagcaagatgctggatggcattacagaatagtcgggggcgatgatccgatttgtctgaataaaattgaagacgacgcctctctattggagtctggctggcttagtcaatatatggaatgggagaaattcattccacccttggaagaagaatccacacttttgctgagaaagaaccttcagtctgttcttccaagataccttgaggcactaaatcgttattctgcaatgtacaaatttaacctcaaaggaagcccagggtggtttcataagtcatttgtctctaatacgaggttagattgggccaaaatgtcaatcgagctgcctcaaaatctacaaaagagcaagaagtggatgggatttgcaatatacgcatcacttgtacaggaagtggggcagataacgaaacagaacaactatcgggtatatgttacactaaaaacgagggataatttacctacatgggtggttcgagtacttacccttaagcacatcaggccattgtcagaagaacatcatcaactattggttatttacataccacgggcacagattcctgaagtgttgttcactcagacattaacaactgtaatggacttttacatcaagatctgtgatagccctcaagtaaaggctcaaagatgtgggttccgcattgtgtaccaagaagatatacaagggtttgctgagactgttatccggtgcatgcagagggaagattctcttaaatctcacgataagttggtggttgaacaatggatacagttgatacgattgcaaggtgcccatatagagggaatgaaagaacgggattccaaaaccccacaggaaaactacttcgaattgcgttcacgaaaatatagaaattgggactggtctgaccctcgtcctgtttcttgtcacttcgagggagctgaaattgtcaagtcgaaatggttcatgcctttcatcaaccaaggcaactctgcagaaatccaactgcctctgaatgtgttcgatgatgataattggttgggatttgccgtatgttctcgcttgtcccacgaccaatttacaaacattagtcctggcagtactgctcccgatccagaggatgctatacatacttaccgtctggactctgatgttgattggcacggcttatttgatttcaccatgcgtgcagatattaagaaacataagccattggaatacgatgcaactctgttcctttatataccgcgcactaaggttcttagtaagatgtggagacaatgcaaattggccaggataactatgtggttttctagcccatgcttagcggtgcatagttgtgcccttcgtctactatttaaggaggacgttgaacatcttgtagaaacattgacccacgccgaattaccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

978

Amino Acids

112.15

Weight (kDa)

6.28

Isoelectric Point (pI)

44.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2333
AccI GTMKAC 1 cut(s) 2875
AccII CGCG 2 cut(s) 1250, 2773
AciI CCGC 5 cut(s) 1248, 1396, 2203, 2771, 2852
AclI AACGTT 1 cut(s) 80
AclWI GGATC 5 cut(s) 1298, 1311, 1414, 1592, 2630
AcoI YGGCCR 1 cut(s) 2814
AcsI RAATTY 7 cut(s) 637, 916, 1123, 1152, 1539, 1679, 1787
AcuI CTGAAG 5 cut(s) 158, 269, 945, 1715, 2130
AcyI GRCGYC 1 cut(s) 1629
AfaI GTAC 7 cut(s) 100, 877, 1784, 1935, 2028, 2213, 2626
AfiI CCNNNNNNNGG 3 cut(s) 128, 1463, 2344
AflII CTTAAG 2 cut(s) 655, 2036
AflIII ACRYGT 1 cut(s) 164
AjnI CCWGG 4 cut(s) 967, 1807, 2617, 2816
Alw21I GWGCWC 1 cut(s) 31
Alw26I GTCTC 7 cut(s) 129, 440, 782, 966, 1837, 2234, 2794
Alw44I GTGCAC 1 cut(s) 27
AlwI GGATC 5 cut(s) 1298, 1311, 1414, 1592, 2630
AlwNI CAGNNNCTG 1 cut(s) 968
Ama87I CYCGRG 1 cut(s) 785
AoxI GGCC 3 cut(s) 1854, 2048, 2814
ApaLI GTGCAC 1 cut(s) 27
ApeKI GCWGC 3 cut(s) 702, 826, 1873
ApoI RAATTY 7 cut(s) 637, 916, 1123, 1152, 1539, 1679, 1787
AseI ATTAAT 1 cut(s) 150
Asp700I GAANNNNTTC 3 cut(s) 213, 2486, 2543
AspLEI GCGC 2 cut(s) 798, 2775
AspS9I GGNCC 3 cut(s) 309, 1525, 1854
AsuHPI GGTGA 3 cut(s) 110, 1498, 2695
AsuII TTCGAA 1 cut(s) 2391
AvaI CYCGRG 1 cut(s) 785
AvaII GGWCC 2 cut(s) 309, 1525
BaeGI GKGCMC 4 cut(s) 31, 2101, 2338, 2869
BalI TGGCCA 1 cut(s) 2816
BamHI GGATCC 1 cut(s) 1303
BanI GGYRCC 1 cut(s) 2333
BbsI GAAGAC 2 cut(s) 842, 1629
Bbv12I GWGCWC 1 cut(s) 31
BbvI GCAGC 3 cut(s) 714, 813, 1860
BccI CCATC 6 cut(s) 299, 340, 667, 671, 1563, 1900
BceAI ACGGC 3 cut(s) 23, 2558, 2704
BciT130I CCWGG 4 cut(s) 969, 1809, 2619, 2818
BciVI GTATCC 1 cut(s) 2304
BclI TGATCA 1 cut(s) 1069
BcoDI GTCTC 7 cut(s) 129, 440, 782, 966, 1837, 2234, 2794
BfaI CTAG 6 cut(s) 551, 599, 650, 1091, 1547, 2838
BfmI CTRYAG 3 cut(s) 566, 1143, 2517
BfrI CTTAAG 2 cut(s) 655, 2036
BfuI GTATCC 1 cut(s) 2304
BglII AGATCT 1 cut(s) 2160
BisI GCNGC 5 cut(s) 703, 827, 1248, 1396, 1874
BlpI GCTNAGC 1 cut(s) 2848
BlsI GCNGC 5 cut(s) 704, 828, 1249, 1397, 1875
BmcAI AGTACT 2 cut(s) 2028, 2626
Bme1390I CCNGG 4 cut(s) 969, 1809, 2619, 2818
Bme18I GGWCC 2 cut(s) 309, 1525
BmeT110I CYCGRG 1 cut(s) 785
BmgT120I GGNCC 3 cut(s) 309, 1525, 1854
BmiI GGNNCC 7 cut(s) 66, 310, 1305, 1365, 1455, 2201, 2335
BmrFI CCNGG 4 cut(s) 969, 1809, 2619, 2818
BmsI GCATC 7 cut(s) 403, 1105, 1523, 1552, 1934, 2635, 2737
BoxI GACNNNNGTC 2 cut(s) 941, 2436
BpiI GAAGAC 2 cut(s) 842, 1629
BplI GAGNNNNNCTC 2 cut(s) 672, 704
BpmI CTGGAG 4 cut(s) 33, 311, 521, 990
Bpu1102I GCTNAGC 1 cut(s) 2848
Bpu14I TTCGAA 1 cut(s) 2391
BpuEI CTTGAG 3 cut(s) 820, 1775, 2160
BsaHI GRCGYC 1 cut(s) 1629
BsaWI WCCGGW 2 cut(s) 1300, 2250
Bsc4I CCNNNNNNNGG 3 cut(s) 128, 1463, 2344
Bse1I ACTGG 2 cut(s) 355, 2429
Bse3DI GCAATG 1 cut(s) 1785
BseBI CCWGG 4 cut(s) 969, 1809, 2619, 2818
BseGI GGATG 7 cut(s) 310, 593, 682, 1514, 1574, 1911, 2650
BseLI CCNNNNNNNGG 3 cut(s) 128, 1463, 2344
BseMI GCAATG 1 cut(s) 1785
BseMII CTCAG 7 cut(s) 51, 1002, 1073, 1278, 1709, 2138, 2229
BseNI ACTGG 2 cut(s) 355, 2429
BseSI GKGCMC 4 cut(s) 31, 2101, 2338, 2869
BseXI GCAGC 3 cut(s) 714, 813, 1860
BsgI GTGCAG 1 cut(s) 2733
Bsh1236I CGCG 2 cut(s) 1250, 2773
BshFI GGCC 3 cut(s) 1856, 2050, 2816
BshNI GGYRCC 1 cut(s) 2333
BsiHKAI GWGCWC 1 cut(s) 31
BsiHKCI CYCGRG 1 cut(s) 785
BsiSI CCGG 2 cut(s) 1301, 2251
BslFI GGGAC 4 cut(s) 322, 535, 2435, 2575
BslI CCNNNNNNNGG 3 cut(s) 128, 1463, 2344
BsmAI GTCTC 7 cut(s) 129, 440, 782, 966, 1837, 2234, 2794
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 4 cut(s) 322, 535, 2435, 2575
BsmI GAATGC 1 cut(s) 186
BsnI GGCC 3 cut(s) 1856, 2050, 2816
BsoBI CYCGRG 1 cut(s) 785
Bsp119I TTCGAA 1 cut(s) 2391
Bsp1286I GDGCHC 4 cut(s) 31, 2101, 2338, 2869
Bsp1407I TGTACA 3 cut(s) 98, 1782, 1933
Bsp143I GATC 8 cut(s) 70, 1069, 1282, 1303, 1406, 1597, 2160, 2635
Bsp1720I GCTNAGC 1 cut(s) 2848
Bsp19I CCATGG 1 cut(s) 1518
BspACI CCGC 5 cut(s) 1248, 1396, 2203, 2771, 2852
BspANI GGCC 3 cut(s) 1856, 2050, 2816
BspCNI CTCAG 7 cut(s) 52, 1003, 1074, 1277, 1710, 2137, 2230
BspFNI CGCG 2 cut(s) 1250, 2773
BspLI GGNNCC 7 cut(s) 66, 310, 1305, 1365, 1455, 2201, 2335
BspMAI CTGCAG 1 cut(s) 2521
BspPI GGATC 5 cut(s) 1298, 1311, 1414, 1592, 2630
BspT104I TTCGAA 1 cut(s) 2391
BspT107I GGYRCC 1 cut(s) 2333
BspTI CTTAAG 2 cut(s) 655, 2036
BsrDI GCAATG 1 cut(s) 1785
BsrGI TGTACA 3 cut(s) 98, 1782, 1933
BsrI ACTGG 2 cut(s) 355, 2429
BssMI GATC 8 cut(s) 70, 1069, 1282, 1303, 1406, 1597, 2160, 2635
BssNI GRCGYC 1 cut(s) 1629
BssT1I CCWWGG 6 cut(s) 204, 583, 1402, 1518, 1692, 2506
Bst2UI CCWGG 4 cut(s) 969, 1809, 2619, 2818
Bst4CI ACNGT 8 cut(s) 380, 570, 1174, 1483, 2140, 2245, 2316, 2663
BstACI GRCGYC 1 cut(s) 1629
BstAFI CTTAAG 2 cut(s) 655, 2036
BstAUI TGTACA 3 cut(s) 98, 1782, 1933
BstBI TTCGAA 1 cut(s) 2391
BstC8I GCNNGC 6 cut(s) 287, 510, 1393, 1652, 2258, 2712
BstDSI CCRYGG 2 cut(s) 1518, 2093
BstF5I GGATG 7 cut(s) 310, 593, 682, 1514, 1574, 1911, 2650
BstFNI CGCG 2 cut(s) 1250, 2773
BstHHI GCGC 2 cut(s) 798, 2775
BstKTI GATC 8 cut(s) 73, 1072, 1285, 1306, 1409, 1600, 2163, 2638
BstMAI GTCTC 7 cut(s) 129, 440, 782, 966, 1837, 2234, 2794
BstMBI GATC 8 cut(s) 70, 1069, 1282, 1303, 1406, 1597, 2160, 2635
BstMWI GCNNNNNNNGC 5 cut(s) 823, 835, 1253, 1922, 2047
BstNI CCWGG 4 cut(s) 969, 1809, 2619, 2818
BstNSI RCATGY 2 cut(s) 168, 2260
BstPAI GACNNNNGTC 2 cut(s) 941, 2436
BstSCI CCNGG 4 cut(s) 967, 1807, 2617, 2816
BstSFI CTRYAG 3 cut(s) 566, 1143, 2517
BstSLI GKGCMC 4 cut(s) 31, 2101, 2338, 2869
BstUI CGCG 2 cut(s) 1250, 2773
BstV1I GCAGC 3 cut(s) 714, 813, 1860
BstV2I GAAGAC 2 cut(s) 842, 1629
BstX2I RGATCY 2 cut(s) 1303, 2160
BstXI CCANNNNNNTGG 1 cut(s) 1535
BstYI RGATCY 2 cut(s) 1303, 2160
BsuI GTATCC 1 cut(s) 2304
BsuRI GGCC 3 cut(s) 1856, 2050, 2816
BtgI CCRYGG 2 cut(s) 1518, 2093
BtgZI GCGATG 1 cut(s) 1608
BtsCI GGATG 7 cut(s) 310, 593, 682, 1514, 1574, 1911, 2650
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 5 cut(s) 57, 198, 881, 1079, 1170
Cac8I GCNNGC 6 cut(s) 287, 510, 1393, 1652, 2258, 2712
CaiI CAGNNNCTG 1 cut(s) 968
CfoI GCGC 2 cut(s) 798, 2775
Cfr13I GGNCC 3 cut(s) 309, 1525, 1854
CseI GACGC 2 cut(s) 1346, 1637
Csp6I GTAC 7 cut(s) 99, 876, 1783, 1934, 2027, 2212, 2625
CviQI GTAC 7 cut(s) 99, 876, 1783, 1934, 2027, 2212, 2625
DpnI GATC 8 cut(s) 72, 1071, 1284, 1305, 1408, 1599, 2162, 2637
DpnII GATC 8 cut(s) 70, 1069, 1282, 1303, 1406, 1597, 2160, 2635
EaeI YGGCCR 1 cut(s) 2814
Eco130I CCWWGG 6 cut(s) 204, 583, 1402, 1518, 1692, 2506
Eco47I GGWCC 2 cut(s) 309, 1525
Eco57I CTGAAG 5 cut(s) 158, 269, 945, 1715, 2130
Eco88I CYCGRG 1 cut(s) 785
EcoRI GAATTC 2 cut(s) 916, 1539
EcoRII CCWGG 4 cut(s) 967, 1807, 2617, 2816
EcoT14I CCWWGG 6 cut(s) 204, 583, 1402, 1518, 1692, 2506
EcoT22I ATGCAT 1 cut(s) 1516
ErhI CCWWGG 6 cut(s) 204, 583, 1402, 1518, 1692, 2506
Esp3I CGTCTC 1 cut(s) 129
FalI AAGNNNNNCTT 2 cut(s) 2259, 2291
FaqI GGGAC 4 cut(s) 322, 535, 2435, 2575
FauNDI CATATG 1 cut(s) 1369
FbaI TGATCA 1 cut(s) 1069
FblI GTMKAC 1 cut(s) 2875
Fnu4HI GCNGC 5 cut(s) 703, 827, 1248, 1396, 1874
FokI GGATG 7 cut(s) 317, 600, 689, 1501, 1581, 1918, 2657
Fsp4HI GCNGC 5 cut(s) 703, 827, 1248, 1396, 1874
FspBI CTAG 6 cut(s) 551, 599, 650, 1091, 1547, 2838
GlaI GCGC 2 cut(s) 797, 2774
GluI GCNGC 5 cut(s) 703, 827, 1248, 1396, 1874
GsuI CTGGAG 4 cut(s) 33, 311, 521, 990
HaeIII GGCC 3 cut(s) 1856, 2050, 2816
HapII CCGG 2 cut(s) 1301, 2251
HgaI GACGC 2 cut(s) 1346, 1637
HhaI GCGC 2 cut(s) 798, 2775
Hin1I GRCGYC 1 cut(s) 1629
Hin6I GCGC 2 cut(s) 796, 2773
HinP1I GCGC 2 cut(s) 796, 2773
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HindIII AAGCTT 5 cut(s) 103, 143, 283, 506, 836
HpaII CCGG 2 cut(s) 1301, 2251
HphI GGTGA 3 cut(s) 110, 1498, 2695
Hpy166II GTNNAC 8 cut(s) 29, 45, 118, 996, 2121, 2212, 2402, 2876
Hpy8I GTNNAC 8 cut(s) 29, 45, 118, 996, 2121, 2212, 2402, 2876
Hpy99I CGWCG 1 cut(s) 1631
HpyAV CCTTC 4 cut(s) 224, 1231, 1739, 2879
HpyCH4III ACNGT 8 cut(s) 380, 570, 1174, 1483, 2140, 2245, 2316, 2663
HpyCH4IV ACGT 2 cut(s) 80, 2892
HpyF10VI GCNNNNNNNGC 5 cut(s) 823, 835, 1253, 1922, 2047
HpySE526I ACGT 2 cut(s) 80, 2892
Hsp92I GRCGYC 1 cut(s) 1629
HspAI GCGC 2 cut(s) 796, 2773
Ksp22I TGATCA 1 cut(s) 1069
Kzo9I GATC 8 cut(s) 70, 1069, 1282, 1303, 1406, 1597, 2160, 2635
LmnI GCTCC 5 cut(s) 292, 458, 680, 2462, 2635
Lsp1109I GCAGC 3 cut(s) 714, 813, 1860
LweI GCATC 7 cut(s) 403, 1105, 1523, 1552, 1934, 2635, 2737
MaeI CTAG 6 cut(s) 551, 599, 650, 1091, 1547, 2838
MaeII ACGT 2 cut(s) 80, 2892
MaeIII GTNAC 3 cut(s) 934, 1981, 2450
MalI GATC 8 cut(s) 72, 1071, 1284, 1305, 1408, 1599, 2162, 2637
MboI GATC 8 cut(s) 70, 1069, 1282, 1303, 1406, 1597, 2160, 2635
MfeI CAATTG 3 cut(s) 336, 513, 821
MflI RGATCY 2 cut(s) 1303, 2160
MhlI GDGCHC 4 cut(s) 31, 2101, 2338, 2869
MlsI TGGCCA 1 cut(s) 2816
MluNI TGGCCA 1 cut(s) 2816
MlyI GAGTC 4 cut(s) 784, 935, 1652, 2663
MmeI TCCRAC 4 cut(s) 90, 1051, 1356, 2551
Mox20I TGGCCA 1 cut(s) 2816
Mph1103I ATGCAT 1 cut(s) 1516
MroXI GAANNNNTTC 3 cut(s) 213, 2486, 2543
MscI TGGCCA 1 cut(s) 2816
MslI CAYNNNNRTG 2 cut(s) 303, 2862
Msp20I TGGCCA 1 cut(s) 2816
MspCI CTTAAG 2 cut(s) 655, 2036
MspI CCGG 2 cut(s) 1301, 2251
MspR9I CCNGG 4 cut(s) 969, 1809, 2619, 2818
MunI CAATTG 3 cut(s) 336, 513, 821
Mva1269I GAATGC 1 cut(s) 186
MvaI CCWGG 4 cut(s) 969, 1809, 2619, 2818
MvnI CGCG 2 cut(s) 1250, 2773
MwoI GCNNNNNNNGC 5 cut(s) 823, 835, 1253, 1922, 2047
NcoI CCATGG 1 cut(s) 1518
NdeI CATATG 1 cut(s) 1369
NdeII GATC 8 cut(s) 70, 1069, 1282, 1303, 1406, 1597, 2160, 2635
NlaIV GGNNCC 7 cut(s) 66, 310, 1305, 1365, 1455, 2201, 2335
NmuCI GTSAC 2 cut(s) 934, 2450
NsiI ATGCAT 1 cut(s) 1516
NspI RCATGY 2 cut(s) 168, 2260
NspV TTCGAA 1 cut(s) 2391
PaeI GCATGC 1 cut(s) 2260
PaeR7I CTCGAG 1 cut(s) 785
PasI CCCWGGG 1 cut(s) 1808
PciI ACATGT 1 cut(s) 164
PctI GAATGC 1 cut(s) 186
PdmI GAANNNNTTC 3 cut(s) 213, 2486, 2543
PkrI GCNGC 5 cut(s) 704, 828, 1249, 1397, 1875
PleI GAGTC 4 cut(s) 784, 934, 1651, 2663
PpsI GAGTC 4 cut(s) 784, 934, 1651, 2663
PscI ACATGT 1 cut(s) 164
PshAI GACNNNNGTC 2 cut(s) 941, 2436
PshBI ATTAAT 1 cut(s) 150
Psp1406I AACGTT 1 cut(s) 80
Psp6I CCWGG 4 cut(s) 967, 1807, 2617, 2816
PspGI CCWGG 4 cut(s) 967, 1807, 2617, 2816
PspN4I GGNNCC 7 cut(s) 66, 310, 1305, 1365, 1455, 2201, 2335
PspPI GGNCC 3 cut(s) 309, 1525, 1854
PsrI GAACNNNNNNTAC 2 cut(s) 2295, 2327
PstI CTGCAG 1 cut(s) 2521
PstNI CAGNNNCTG 1 cut(s) 968
PsuI RGATCY 2 cut(s) 1303, 2160
RsaI GTAC 7 cut(s) 100, 877, 1784, 1935, 2028, 2213, 2626
RsaNI GTAC 7 cut(s) 99, 876, 1783, 1934, 2027, 2212, 2625
RseI CAYNNNNRTG 2 cut(s) 303, 2862
SaqAI TTAA 6 cut(s) 150, 180, 267, 656, 716, 731
SatI GCNGC 5 cut(s) 703, 827, 1248, 1396, 1874
Sau3AI GATC 8 cut(s) 70, 1069, 1282, 1303, 1406, 1597, 2160, 2635
Sau96I GGNCC 3 cut(s) 309, 1525, 1854
ScaI AGTACT 2 cut(s) 2028, 2626
SchI GAGTC 4 cut(s) 784, 935, 1652, 2663
ScrFI CCNGG 4 cut(s) 969, 1809, 2619, 2818
SduI GDGCHC 4 cut(s) 31, 2101, 2338, 2869
SfaNI GCATC 7 cut(s) 403, 1105, 1523, 1552, 1934, 2635, 2737
SfcI CTRYAG 3 cut(s) 566, 1143, 2517
Sfr274I CTCGAG 1 cut(s) 785
SfuI TTCGAA 1 cut(s) 2391
SinI GGWCC 2 cut(s) 309, 1525
SlaI CTCGAG 1 cut(s) 785
SmiMI CAYNNNNRTG 2 cut(s) 303, 2862
SmlI CTYRAG 6 cut(s) 655, 785, 799, 1754, 2036, 2175
SmoI CTYRAG 6 cut(s) 655, 785, 799, 1754, 2036, 2175
SphI GCATGC 1 cut(s) 2260
SsiI CCGC 5 cut(s) 1248, 1396, 2203, 2771, 2852
SspI AATATT 2 cut(s) 95, 222
SspMI CTAG 6 cut(s) 551, 599, 650, 1091, 1547, 2838
StyD4I CCNGG 4 cut(s) 967, 1807, 2617, 2816
StyI CCWWGG 6 cut(s) 204, 583, 1402, 1518, 1692, 2506
TaaI ACNGT 8 cut(s) 380, 570, 1174, 1483, 2140, 2245, 2316, 2663
TaiI ACGT 2 cut(s) 83, 2895
TatI WGTACW 6 cut(s) 98, 875, 1782, 1933, 2026, 2624
TauI GCSGC 2 cut(s) 1250, 1398
TscAI CASTG 5 cut(s) 64, 205, 888, 1086, 1177
TseFI GTSAC 2 cut(s) 934, 2450
TseI GCWGC 3 cut(s) 702, 826, 1873
Tsp45I GTSAC 2 cut(s) 934, 2450
TspGWI ACGGA 1 cut(s) 831
TspRI CASTG 5 cut(s) 64, 205, 888, 1086, 1177
Vha464I CTTAAG 2 cut(s) 655, 2036
VneI GTGCAC 1 cut(s) 27
VpaK11BI GGWCC 2 cut(s) 309, 1525
VspI ATTAAT 1 cut(s) 150
XapI RAATTY 7 cut(s) 637, 916, 1123, 1152, 1539, 1679, 1787
XceI RCATGY 2 cut(s) 168, 2260
XcmI CCANNNNNNNNNTGG 1 cut(s) 1516
XhoI CTCGAG 1 cut(s) 785
XmiI GTMKAC 1 cut(s) 2875
XmnI GAANNNNTTC 3 cut(s) 213, 2486, 2543
XspI CTAG 6 cut(s) 551, 599, 650, 1091, 1547, 2838
ZrmI AGTACT 2 cut(s) 2028, 2626
Zsp2I ATGCAT 1 cut(s) 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.