Rmu_sc0002517.1_g000014

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002517.1
OG0000129
Physical Location & Seq
Forward (+)
55904 .. 58470
2567 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002517.1_g000014.1.cds

Sequence Viewer

Length: 2283 bp
atgctacggcatttagatctgactggttcagaagacttgacgtcgactccagacttcactgaggttcctgatcttgagacattggtgcttgaagactgtacaaacttggtggaggttcacccgtctcttggatttctgaagaaacttgtctctttgaatatgagaaattgctcgtctattgagagcattccacctttcactgccttggaatcccttcaaatattgacgctttcattctgttttggactgaagaagtttccagaaattgaaggaaatatgaaaagcttgctggagcttcatttggatgggaccagcattgaggaattgcctccatcaattgaacgcttgactggtcttaccatgttgaatctagcagactgtcaaaaccttttgcatcttcccaataccattgggtgcttgacatctttgaaaagtctcgatctaacaggttgctccaaaatcgatgcgatacctgagaatctgaatggtatgaaatatctgcagaagcttttaattggtgaaacttccataagggacttatctttcattgtaggcatgaagaatctacagtatctatcctgccgaggatgtaaatgtctagtttcagaatcatgcaaaggtctggcttcgttatcgaatttgatagagctagacttgagttattgcaatctcatgtatggagaaattccctttagcagactaatctccttaagagagttaaatttaagtggtaattgctttgtgcgattacctgaaagcatctctcaactctcaaagctcgagattctgaacttgaggaattgcaggcagcttcaattgctgcccaggaagcttccgttaagtcttcataacgtgcatgcagaaggatgtacttcactgacggattaccctaatcaaatcaaagtattgaattcattggagtcgggggtgactattgtcaattccctcaattcttcagaactcggagcctcacaaagttaccgaatgtcggtgattccaaaagaggagggaggatcaccagtgctgcgtgtgacgtattcagggggcaaagaagttgatcatttgctactgacaaatctagcgcttctaaaacaagaaatgccttactgctcagagttcagtggcatatttcctagggatgaaattccagagtggttcagtactatatctaccagaaatcccatatcaatgtcaataccgcaaaagctggccgatgacaacaagtggaagggatttgccgcgtgtgctatattctcagtcaaggggcatactgctctctccgttattgaaccggatcctgattttcttaattactcgtatcaaatcacattggaaactgatgttgtgcatcgagaaccatttgtgttcgactgtcatgaagggcgccgcccccttggatcaagttctcatctgcttatgattttctatatatctcgttcagaggttccacagtgggggttaaatcaatcaactgtggtgagggctatgtttgaaacccccaatccatccatggttgtccagaaatgtggaattcgtctagtctatgagcaagatgctggatggcatttcagaatagccaccggcggtagtccgatttgtctgaatgaagttgaggacgacgcctctgtattggagtctggctggcttagtcaatctttggaatgggagaaattcattccacccttgctgagaaagaacctggacagaaggcattccagaatctcacgggaaaaatactttgaattgcactcacgaaaatatagaaattgggactggtctgaccctcgttctgtttcttgtcacttcaacggagctaaaattttcaagtggaaaaggttcatgcctttcatcaaccaaggcaactctgcagaaatccaactgcctctaaatctgttcgatgatgataattggctggggtttgccgtatgttgtcagttgtcccacgacccatatccaaacattagtcttggcagtactgctcctgattcagaagatgttatgtttacttgccatctggactctgatgttgcttggcagggtttatttgattccgacacgcaaataaattttaagagtctagagccatcggtattcgatatgacttggttcttttatacaccgcgcactaggcttagtaaggtttggaagcaatgtaaattggccaagataactatgtggttctctagcccatgcttagcggtgcatagttgtgcccttcgtctactatttaaggaggacgttgaacatcttgtagaaacactgaccctcaccgaattaccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

760

Amino Acids

85.93

Weight (kDa)

5.49

Isoelectric Point (pI)

46.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 44
AccB1I GGYRCC 1 cut(s) 1383
AccI GTMKAC 2 cut(s) 44, 2221
AccII CGCG 2 cut(s) 1241, 2122
AciI CCGC 6 cut(s) 1199, 1239, 1387, 1584, 2120, 2198
AclWI GGATC 4 cut(s) 1021, 1289, 1302, 1405
AcoI YGGCCR 2 cut(s) 1209, 2160
AcsI RAATTY 9 cut(s) 637, 684, 721, 910, 1143, 1530, 1670, 1818, 2065
AcuI CTGAAG 3 cut(s) 158, 269, 939
AcyI GRCGYC 3 cut(s) 41, 1384, 1620
AfaI GTAC 4 cut(s) 100, 871, 1162, 1975
AfeI AGCGCT 1 cut(s) 1083
AfiI CCNNNNNNNGG 3 cut(s) 128, 988, 1454
AflII CTTAAG 1 cut(s) 709
AhdI GACNNNNNGTC 1 cut(s) 40
AjnI CCWGG 2 cut(s) 824, 1698
AluBI AGCT 9 cut(s) 285, 295, 508, 649, 778, 811, 832, 1207, 1814
AluI AGCT 9 cut(s) 285, 295, 508, 649, 778, 811, 832, 1207, 1814
Alw26I GTCTC 4 cut(s) 71, 129, 154, 440
AlwI GGATC 4 cut(s) 1021, 1289, 1302, 1405
Ama87I CYCGRG 1 cut(s) 779
Aor51HI AGCGCT 1 cut(s) 1083
AoxI GGCC 2 cut(s) 1209, 2160
ApeKI GCWGC 3 cut(s) 808, 820, 1024
ApoI RAATTY 9 cut(s) 637, 684, 721, 910, 1143, 1530, 1670, 1818, 2065
Asp700I GAANNNNTTC 3 cut(s) 213, 1711, 1835
AspA2I CCTAGG 1 cut(s) 1133
AspLEI GCGC 3 cut(s) 1084, 1386, 2124
AspS9I GGNCC 1 cut(s) 309
AsuHPI GGTGA 7 cut(s) 110, 530, 940, 1003, 1008, 1489, 2260
AvaI CYCGRG 1 cut(s) 779
AvaII GGWCC 1 cut(s) 309
AvrII CCTAGG 1 cut(s) 1133
BaeGI GKGCMC 1 cut(s) 2215
BalI TGGCCA 1 cut(s) 2162
BamHI GGATCC 1 cut(s) 1294
BanI GGYRCC 1 cut(s) 1383
BbsI GAAGAC 3 cut(s) 39, 99, 836
BbvI GCAGC 3 cut(s) 807, 820, 1011
BccI CCATC 6 cut(s) 299, 340, 1513, 1554, 2019, 2092
BceAI ACGGC 2 cut(s) 23, 1907
BciT130I CCWGG 2 cut(s) 826, 1700
BclI TGATCA 1 cut(s) 1057
BcoDI GTCTC 4 cut(s) 71, 129, 154, 440
BfaI CTAG 9 cut(s) 371, 599, 650, 1079, 1134, 1538, 2078, 2127, 2184
BfmI CTRYAG 3 cut(s) 500, 566, 1866
BfoI RGCGCY 2 cut(s) 1085, 1387
BfrI CTTAAG 1 cut(s) 709
BglII AGATCT 1 cut(s) 16
BisI GCNGC 5 cut(s) 809, 821, 1025, 1239, 1387
BlnI CCTAGG 1 cut(s) 1133
BlpI GCTNAGC 1 cut(s) 2194
BlsI GCNGC 5 cut(s) 810, 822, 1026, 1240, 1388
BmcAI AGTACT 2 cut(s) 1162, 1975
Bme1390I CCNGG 2 cut(s) 826, 1700
Bme18I GGWCC 1 cut(s) 309
BmeRI GACNNNNNGTC 1 cut(s) 40
BmeT110I CYCGRG 1 cut(s) 779
BmgT120I GGNCC 1 cut(s) 309
BmiI GGNNCC 6 cut(s) 66, 310, 967, 1296, 1385, 1446
BmrFI CCNGG 2 cut(s) 826, 1700
BmsI GCATC 5 cut(s) 403, 454, 768, 1357, 1543
BoxI GACNNNNGTC 1 cut(s) 935
BpiI GAAGAC 3 cut(s) 39, 99, 836
BpmI CTGGAG 2 cut(s) 33, 311
Bpu1102I GCTNAGC 1 cut(s) 2194
BpuEI CTTGAG 3 cut(s) 95, 676, 814
Bsa29I ATCGAT 1 cut(s) 462
BsaHI GRCGYC 3 cut(s) 41, 1384, 1620
BsaJI CCNNGG 7 cut(s) 204, 583, 824, 1133, 1393, 1509, 1855
BsaWI WCCGGW 1 cut(s) 1291
BsaXI ACNNNNNCTCC 2 cut(s) 31, 61
Bsc4I CCNNNNNNNGG 3 cut(s) 128, 988, 1454
Bse118I RCCGGY 1 cut(s) 1580
Bse1I ACTGG 4 cut(s) 28, 355, 1019, 1778
Bse3DI GCAATG 1 cut(s) 2156
BseBI CCWGG 2 cut(s) 826, 1700
BseCI ATCGAT 1 cut(s) 462
BseDI CCNNGG 7 cut(s) 204, 583, 824, 1133, 1393, 1509, 1855
BseGI GGATG 6 cut(s) 310, 593, 872, 1144, 1505, 1565
BseLI CCNNNNNNNGG 3 cut(s) 128, 988, 1454
BseMI GCAATG 1 cut(s) 2156
BseMII CTCAG 5 cut(s) 51, 465, 1125, 1269, 1679
BseNI ACTGG 4 cut(s) 28, 355, 1019, 1778
BseRI GAGGAG 1 cut(s) 1019
BseSI GKGCMC 1 cut(s) 2215
BseXI GCAGC 3 cut(s) 807, 820, 1011
BseYI CCCAGC 1 cut(s) 1912
Bsh1236I CGCG 2 cut(s) 1241, 2122
BshFI GGCC 2 cut(s) 1211, 2162
BshNI GGYRCC 1 cut(s) 1383
BshVI ATCGAT 1 cut(s) 462
BsiHKCI CYCGRG 1 cut(s) 779
BsiSI CCGG 2 cut(s) 1292, 1581
BslFI GGGAC 4 cut(s) 322, 548, 1784, 1924
BslI CCNNNNNNNGG 3 cut(s) 128, 988, 1454
BsmAI GTCTC 4 cut(s) 71, 129, 154, 440
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 4 cut(s) 322, 548, 1784, 1924
BsmI GAATGC 2 cut(s) 186, 1711
BsnI GGCC 2 cut(s) 1211, 2162
BsoBI CYCGRG 1 cut(s) 779
Bsp1286I GDGCHC 1 cut(s) 2215
Bsp1407I TGTACA 1 cut(s) 98
Bsp143I GATC 7 cut(s) 16, 70, 439, 1013, 1057, 1294, 1397
Bsp1720I GCTNAGC 1 cut(s) 2194
Bsp19I CCATGG 1 cut(s) 1509
BspACI CCGC 6 cut(s) 1199, 1239, 1387, 1584, 2120, 2198
BspANI GGCC 2 cut(s) 1211, 2162
BspCNI CTCAG 5 cut(s) 52, 466, 1124, 1268, 1680
BspDI ATCGAT 1 cut(s) 462
BspFNI CGCG 2 cut(s) 1241, 2122
BspHI TCATGA 1 cut(s) 1375
BspLI GGNNCC 6 cut(s) 66, 310, 967, 1296, 1385, 1446
BspMAI CTGCAG 2 cut(s) 504, 1870
BspPI GGATC 4 cut(s) 1021, 1289, 1302, 1405
BspT107I GGYRCC 1 cut(s) 1383
BspTI CTTAAG 1 cut(s) 709
BsrDI GCAATG 1 cut(s) 2156
BsrFI RCCGGY 1 cut(s) 1580
BsrGI TGTACA 1 cut(s) 98
BsrI ACTGG 4 cut(s) 28, 355, 1019, 1778
BssAI RCCGGY 1 cut(s) 1580
BssECI CCNNGG 7 cut(s) 204, 583, 824, 1133, 1393, 1509, 1855
BssMI GATC 7 cut(s) 16, 70, 439, 1013, 1057, 1294, 1397
BssNI GRCGYC 3 cut(s) 41, 1384, 1620
BssT1I CCWWGG 5 cut(s) 204, 1133, 1393, 1509, 1855
Bst2UI CCWGG 2 cut(s) 826, 1700
Bst4CI ACNGT 6 cut(s) 98, 380, 570, 1373, 1452, 1474
BstACI GRCGYC 3 cut(s) 41, 1384, 1620
BstAFI CTTAAG 1 cut(s) 709
BstAUI TGTACA 1 cut(s) 98
BstC8I GCNNGC 5 cut(s) 287, 806, 858, 1209, 1643
BstDEI CTNAG 8 cut(s) 60, 474, 1111, 1255, 1646, 1688, 2132, 2194
BstDSI CCRYGG 1 cut(s) 1509
BstF5I GGATG 6 cut(s) 310, 593, 872, 1144, 1505, 1565
BstFNI CGCG 2 cut(s) 1241, 2122
BstH2I RGCGCY 2 cut(s) 1085, 1387
BstHHI GCGC 3 cut(s) 1084, 1386, 2124
BstKTI GATC 7 cut(s) 19, 73, 442, 1016, 1060, 1297, 1400
BstMAI GTCTC 4 cut(s) 71, 129, 154, 440
BstMBI GATC 7 cut(s) 16, 70, 439, 1013, 1057, 1294, 1397
BstMWI GCNNNNNNNGC 4 cut(s) 817, 829, 1244, 2128
BstNI CCWGG 2 cut(s) 826, 1700
BstNSI RCATGY 1 cut(s) 860
BstPAI GACNNNNGTC 1 cut(s) 935
BstSCI CCNGG 2 cut(s) 824, 1698
BstSFI CTRYAG 3 cut(s) 500, 566, 1866
BstSLI GKGCMC 1 cut(s) 2215
BstUI CGCG 2 cut(s) 1241, 2122
BstV1I GCAGC 3 cut(s) 807, 820, 1011
BstV2I GAAGAC 3 cut(s) 39, 99, 836
BstX2I RGATCY 2 cut(s) 16, 1294
BstXI CCANNNNNNTGG 1 cut(s) 1526
BstYI RGATCY 2 cut(s) 16, 1294
Bsu15I ATCGAT 1 cut(s) 462
BsuRI GGCC 2 cut(s) 1211, 2162
BsuTUI ATCGAT 1 cut(s) 462
BtgI CCRYGG 1 cut(s) 1509
BtsCI GGATG 6 cut(s) 310, 593, 872, 1144, 1505, 1565
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 7 cut(s) 57, 198, 875, 1026, 1126, 1457, 2258
Cac8I GCNNGC 5 cut(s) 287, 806, 858, 1209, 1643
CciI TCATGA 1 cut(s) 1375
CfoI GCGC 3 cut(s) 1084, 1386, 2124
Cfr10I RCCGGY 1 cut(s) 1580
Cfr13I GGNCC 1 cut(s) 309
ClaI ATCGAT 1 cut(s) 462
CseI GACGC 2 cut(s) 235, 1628
Csp6I GTAC 4 cut(s) 99, 870, 1161, 1974
CspCI CAANNNNNGTGG 2 cut(s) 90, 125
CviAII CATG 9 cut(s) 361, 556, 612, 673, 857, 1376, 1510, 1840, 2190
CviQI GTAC 4 cut(s) 99, 870, 1161, 1974
DdeI CTNAG 8 cut(s) 60, 474, 1111, 1255, 1646, 1688, 2132, 2194
DinI GGCGCC 1 cut(s) 1385
DpnI GATC 7 cut(s) 18, 72, 441, 1015, 1059, 1296, 1399
DpnII GATC 7 cut(s) 16, 70, 439, 1013, 1057, 1294, 1397
DriI GACNNNNNGTC 1 cut(s) 40
EaeI YGGCCR 2 cut(s) 1209, 2160
Eam1105I GACNNNNNGTC 1 cut(s) 40
Eco130I CCWWGG 5 cut(s) 204, 1133, 1393, 1509, 1855
Eco47I GGWCC 1 cut(s) 309
Eco47III AGCGCT 1 cut(s) 1083
Eco57I CTGAAG 3 cut(s) 158, 269, 939
Eco88I CYCGRG 1 cut(s) 779
EcoRI GAATTC 2 cut(s) 910, 1530
EcoRII CCWGG 2 cut(s) 824, 1698
EcoT14I CCWWGG 5 cut(s) 204, 1133, 1393, 1509, 1855
EgeI GGCGCC 1 cut(s) 1385
EheI GGCGCC 1 cut(s) 1385
ErhI CCWWGG 5 cut(s) 204, 1133, 1393, 1509, 1855
Esp3I CGTCTC 1 cut(s) 129
FaeI CATG 9 cut(s) 364, 559, 615, 676, 860, 1379, 1513, 1843, 2193
FaqI GGGAC 4 cut(s) 322, 548, 1784, 1924
FatI CATG 9 cut(s) 360, 555, 611, 672, 856, 1375, 1509, 1839, 2189
FbaI TGATCA 1 cut(s) 1057
FblI GTMKAC 2 cut(s) 44, 2221
Fnu4HI GCNGC 5 cut(s) 809, 821, 1025, 1239, 1387
FokI GGATG 6 cut(s) 317, 600, 879, 1151, 1492, 1572
Fsp4HI GCNGC 5 cut(s) 809, 821, 1025, 1239, 1387
FspBI CTAG 9 cut(s) 371, 599, 650, 1079, 1134, 1538, 2078, 2127, 2184
GlaI GCGC 3 cut(s) 1083, 1385, 2123
GluI GCNGC 5 cut(s) 809, 821, 1025, 1239, 1387
GsaI CCCAGC 1 cut(s) 1916
GsuI CTGGAG 2 cut(s) 33, 311
HaeII RGCGCY 2 cut(s) 1085, 1387
HaeIII GGCC 2 cut(s) 1211, 2162
HapII CCGG 2 cut(s) 1292, 1581
HgaI GACGC 2 cut(s) 235, 1628
HhaI GCGC 3 cut(s) 1084, 1386, 2124
Hin1I GRCGYC 3 cut(s) 41, 1384, 1620
Hin1II CATG 9 cut(s) 364, 559, 615, 676, 860, 1379, 1513, 1843, 2193
Hin6I GCGC 3 cut(s) 1082, 1384, 2122
HinP1I GCGC 3 cut(s) 1082, 1384, 2122
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HindIII AAGCTT 3 cut(s) 283, 506, 830
HpaII CCGG 2 cut(s) 1292, 1581
HphI GGTGA 7 cut(s) 110, 530, 940, 1003, 1008, 1489, 2260
Hpy166II GTNNAC 4 cut(s) 45, 118, 2004, 2222
Hpy8I GTNNAC 4 cut(s) 45, 118, 2004, 2222
Hpy99I CGWCG 2 cut(s) 46, 1622
HpyAV CCTTC 7 cut(s) 224, 263, 857, 1222, 1373, 1701, 2225
HpyCH4III ACNGT 6 cut(s) 98, 380, 570, 1373, 1452, 1474
HpyCH4IV ACGT 4 cut(s) 41, 852, 1034, 2238
HpyF10VI GCNNNNNNNGC 4 cut(s) 817, 829, 1244, 2128
HpyF3I CTNAG 8 cut(s) 60, 474, 1111, 1255, 1646, 1688, 2132, 2194
HpySE526I ACGT 4 cut(s) 41, 852, 1034, 2238
Hsp92I GRCGYC 3 cut(s) 41, 1384, 1620
Hsp92II CATG 9 cut(s) 364, 559, 615, 676, 860, 1379, 1513, 1843, 2193
HspAI GCGC 3 cut(s) 1082, 1384, 2122
KasI GGCGCC 1 cut(s) 1383
Ksp22I TGATCA 1 cut(s) 1057
Kzo9I GATC 7 cut(s) 16, 70, 439, 1013, 1057, 1294, 1397
LmnI GCTCC 5 cut(s) 292, 458, 965, 1811, 1984
Lsp1109I GCAGC 3 cut(s) 807, 820, 1011
LweI GCATC 5 cut(s) 403, 454, 768, 1357, 1543
MaeI CTAG 9 cut(s) 371, 599, 650, 1079, 1134, 1538, 2078, 2127, 2184
MaeII ACGT 4 cut(s) 41, 852, 1034, 2238
MaeIII GTNAC 4 cut(s) 928, 977, 1030, 1799
MalI GATC 7 cut(s) 18, 72, 441, 1015, 1059, 1296, 1399
MboI GATC 7 cut(s) 16, 70, 439, 1013, 1057, 1294, 1397
MboII GAAGA 9 cut(s) 44, 104, 151, 262, 389, 571, 836, 945, 2003
MfeI CAATTG 2 cut(s) 336, 815
MflI RGATCY 2 cut(s) 16, 1294
MhlI GDGCHC 1 cut(s) 2215
MlsI TGGCCA 1 cut(s) 2162
MluNI TGGCCA 1 cut(s) 2162
Mly113I GGCGCC 1 cut(s) 1384
MlyI GAGTC 5 cut(s) 40, 929, 1643, 2012, 2083
MmeI TCCRAC 2 cut(s) 1900, 2076
Mox20I TGGCCA 1 cut(s) 2162
MroXI GAANNNNTTC 3 cut(s) 213, 1711, 1835
MscI TGGCCA 1 cut(s) 2162
MseI TTAA 9 cut(s) 512, 710, 719, 725, 839, 1308, 1460, 2070, 2229
MslI CAYNNNNRTG 3 cut(s) 303, 1187, 2208
Msp20I TGGCCA 1 cut(s) 2162
MspCI CTTAAG 1 cut(s) 709
MspI CCGG 2 cut(s) 1292, 1581
MspR9I CCNGG 2 cut(s) 826, 1700
MunI CAATTG 2 cut(s) 336, 815
Mva1269I GAATGC 2 cut(s) 186, 1711
MvaI CCWGG 2 cut(s) 826, 1700
MvnI CGCG 2 cut(s) 1241, 2122
MwoI GCNNNNNNNGC 4 cut(s) 817, 829, 1244, 2128
NarI GGCGCC 1 cut(s) 1384
NcoI CCATGG 1 cut(s) 1509
NdeII GATC 7 cut(s) 16, 70, 439, 1013, 1057, 1294, 1397
NlaIII CATG 9 cut(s) 364, 559, 615, 676, 860, 1379, 1513, 1843, 2193
NlaIV GGNNCC 6 cut(s) 66, 310, 967, 1296, 1385, 1446
NmeAIII GCCGAG 1 cut(s) 608
NmuCI GTSAC 3 cut(s) 928, 1030, 1799
NspI RCATGY 1 cut(s) 860
PaeI GCATGC 1 cut(s) 860
PaeR7I CTCGAG 1 cut(s) 779
PagI TCATGA 1 cut(s) 1375
PctI GAATGC 2 cut(s) 186, 1711
PdmI GAANNNNTTC 3 cut(s) 213, 1711, 1835
PkrI GCNGC 5 cut(s) 810, 822, 1026, 1240, 1388
PleI GAGTC 5 cut(s) 40, 928, 1642, 2012, 2082
PluTI GGCGCC 1 cut(s) 1387
PpsI GAGTC 5 cut(s) 40, 928, 1642, 2012, 2082
PshAI GACNNNNGTC 1 cut(s) 935
Psp6I CCWGG 2 cut(s) 824, 1698
PspFI CCCAGC 1 cut(s) 1912
PspGI CCWGG 2 cut(s) 824, 1698
PspN4I GGNNCC 6 cut(s) 66, 310, 967, 1296, 1385, 1446
PspPI GGNCC 1 cut(s) 309
PstI CTGCAG 2 cut(s) 504, 1870
PsuI RGATCY 2 cut(s) 16, 1294
RsaI GTAC 4 cut(s) 100, 871, 1162, 1975
RsaNI GTAC 4 cut(s) 99, 870, 1161, 1974
RseI CAYNNNNRTG 3 cut(s) 303, 1187, 2208
SalI GTCGAC 1 cut(s) 43
SaqAI TTAA 9 cut(s) 512, 710, 719, 725, 839, 1308, 1460, 2070, 2229
SatI GCNGC 5 cut(s) 809, 821, 1025, 1239, 1387
Sau3AI GATC 7 cut(s) 16, 70, 439, 1013, 1057, 1294, 1397
Sau96I GGNCC 1 cut(s) 309
ScaI AGTACT 2 cut(s) 1162, 1975
SchI GAGTC 5 cut(s) 40, 929, 1643, 2012, 2083
ScrFI CCNGG 2 cut(s) 826, 1700
SduI GDGCHC 1 cut(s) 2215
SfaNI GCATC 5 cut(s) 403, 454, 768, 1357, 1543
SfcI CTRYAG 3 cut(s) 500, 566, 1866
SfoI GGCGCC 1 cut(s) 1385
Sfr274I CTCGAG 1 cut(s) 779
SgrAI CRCCGGYG 1 cut(s) 1580
SinI GGWCC 1 cut(s) 309
SlaI CTCGAG 1 cut(s) 779
SmiMI CAYNNNNRTG 3 cut(s) 303, 1187, 2208
SmlI CTYRAG 5 cut(s) 74, 655, 709, 779, 793
SmoI CTYRAG 5 cut(s) 74, 655, 709, 779, 793
SphI GCATGC 1 cut(s) 860
SsiI CCGC 6 cut(s) 1199, 1239, 1387, 1584, 2120, 2198
SspDI GGCGCC 1 cut(s) 1383
SspI AATATT 1 cut(s) 222
SspMI CTAG 9 cut(s) 371, 599, 650, 1079, 1134, 1538, 2078, 2127, 2184
StyD4I CCNGG 2 cut(s) 824, 1698
StyI CCWWGG 5 cut(s) 204, 1133, 1393, 1509, 1855
TaaI ACNGT 6 cut(s) 98, 380, 570, 1373, 1452, 1474
TaiI ACGT 4 cut(s) 44, 855, 1037, 2241
TaqI TCGA 9 cut(s) 44, 438, 462, 635, 780, 1351, 1368, 1896, 2094
TatI WGTACW 4 cut(s) 98, 869, 1160, 1973
TauI GCSGC 2 cut(s) 1241, 1389
Tru1I TTAA 9 cut(s) 512, 710, 719, 725, 839, 1308, 1460, 2070, 2229
Tru9I TTAA 9 cut(s) 512, 710, 719, 725, 839, 1308, 1460, 2070, 2229
TscAI CASTG 7 cut(s) 64, 205, 882, 1026, 1126, 1457, 2265
TseFI GTSAC 3 cut(s) 928, 1030, 1799
TseI GCWGC 3 cut(s) 808, 820, 1024
Tsp45I GTSAC 3 cut(s) 928, 1030, 1799
TspGWI ACGGA 4 cut(s) 825, 896, 1270, 1824
TspRI CASTG 7 cut(s) 64, 205, 882, 1026, 1126, 1457, 2265
Vha464I CTTAAG 1 cut(s) 709
VpaK11BI GGWCC 1 cut(s) 309
XapI RAATTY 9 cut(s) 637, 684, 721, 910, 1143, 1530, 1670, 1818, 2065
XbaI TCTAGA 1 cut(s) 2077
XceI RCATGY 1 cut(s) 860
XcmI CCANNNNNNNNNTGG 1 cut(s) 1507
XhoI CTCGAG 1 cut(s) 779
XmaJI CCTAGG 1 cut(s) 1133
XmiI GTMKAC 2 cut(s) 44, 2221
XmnI GAANNNNTTC 3 cut(s) 213, 1711, 1835
XspI CTAG 9 cut(s) 371, 599, 650, 1079, 1134, 1538, 2078, 2127, 2184
ZraI GACGTC 1 cut(s) 42
ZrmI AGTACT 2 cut(s) 1162, 1975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.