Rorug07G0337200

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000129
Physical Location & Seq
Reverse (-)
37044216 .. 37053950
9735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0337200.1

Sequence Viewer

Length: 1980 bp
ATGGAGGTGTCGGCACTCGGTGTTGGTGTCCAACATGTCCTCTGCTGCAACTCCGTTCCATTTATTCCCTCAGTGACACCTTGGAGCACAAGACTGAATACTTCTCATGTTTGTTGTGCTGCCACAACTCTTGACAAAGAGCCCCTCCGCCGGCAGCCTCCCAACTCTGACACTAGGAGGGTCACAAGGCCTCACTCCAAGCAATATTTGGCTAGACAATCGGCAATTCTTCAACTCCAACAGTCCTCTGACTTGGAATCTGCTCTTACAAGATTAGGTGGAAGTTTGAAGGTTCAAGACTTGAATGCCATAATACGCCATTTTGGGATGCTGAAAAGATGGCATGATCTTTCCCAGCTCTTTGAATGGATGCAACAGAATGGAAAAATTAGTGCGTCGTCATATAGCAGCTATATAAAATTCATGGGGAAGAGCCTCAATCCCGTAAAAGCACTAGAAATTTACAATAGCATTCAAGATGAATCAACCAAAAAGAACGTTCACATATGCAATTCGGTTCTTGGTAGTCTGGTCAGGAGTGGCAAGTTTGATGGCAGTATTAAGTTATTTCACCAGATGAAGCAGGATGGCTTAACACCAGATGCTGTTACCTATAGTACGCTGCTTGCAGGTTGCATCAAATTCAAACACGGTTATTCGAAGGCATTAGAGCTAGTTCAAGAATTACAGAATAATGAGCTGCAGATGGACAGGGTAATATATGGTACACTTTTGGCTATCTGTGCTTCAAATAATAAATGGGAGGAAGCAGAAAGTTATTTTAAGCAGATGAAGGATGAAGGTCATATACCAAATGAATTCCATTACAGCTCTTTGCTCAATGCTTACTCTATCAGCGGGAGCTACAAAAAGGCTGATGATTTGGTGCAAGATATGAAATCTGCAGGGTTAGTACCTAATAAGGTTATTTTGACAACTTTATTGAAGGCTTATGTCAGAGGTGGGTTGTTTGAAAAATCAAGAGACTTATTAGCCGAACTGGAAGCTTTGGGATATGCTGAAGATGAGATGCCATACTGTCTATTGATGGATGCCCTTGCTAAGGCTGGGCGTATACAAGATGCTAAATTGGTTTTTGATGAAATGAAGGAGAAATCCGTACGATCAGATGGATATTCCTACAGTATCATGATTTCTGCTTTCTGCCGAGGTGGGCTTGTAGATGATGCAAAGCAGTTGGCTAAGGATTTTGAAAGAACTTATGACAAATATGATTTGGTTATATTGAATACAATGATCTGTGCCTATTGCAGAGCAGGTGAAATGGATAGTGTAATGGAAATGCTGAGAAAAATGGATGAATTAAAAATCATACCTGATAATAATACCTTCCATATTCTAATAAAGTACTTCTGTAAGGAGAAGTTATACATGCTTGCTTATAAGACCATGGAGGACATGCACAACAAAGGCTACCCACCAGATGAGGAACTTTGTTCCTCCTTAATGTTTCATCTTGGTAAGATAAGGGCATATTCAGAAGCATACTCTATTTACAATATGCTAAGGTATAGTAAGCGAACCATGTGCAAGGCCCTTCATGAGAAGATTCTACACATTCTAGTAGCAGGAAGGCTTCTCAAAGATGCTTATGTAGTAGTCAAGGATAATCCGGGGTTGATTTCTAAGCCTGCTACAATGAAATTTGCAACTGCATTTATGAAATTGGGAAATATCAACTTGATAAATGATGTTTTGAAGGCAATTGATGGTTCTGGTTTCAAGATTGATCAGGGAGTATTTCAGATGGCCATATCACGTTATATTTCAGACCCTGACAAGAAGGACCTGCTTCTTCAGTTACTACAGTGGATGCCGGGACAAGGTTATACTGTGGATTCATCTACAAGAAACCTAATACTGAAAAACTCTCACTTATTTGGTCGCCATCACATTGCTGAGATGCTATCAAAGCAGCATATGATATCAAAAGCTTCAAAATCTACTAAAGATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

659

Amino Acids

74.62

Weight (kDa)

8.87

Isoelectric Point (pI)

40.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 148 - 264 8.8e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 165 - 214 7.5e-13 PPR repeat family
PPR_long PF17177 219 - 359 1.7e-11 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 225 - 283 2.8e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 237 - 283 1.5e-08 PPR repeat family
PPR PF01535 239 - 268 9.4e-06 PPR repeat
PPR_2 PF13041 271 - 319 5.1e-07 PPR repeat family
TPR_24 PF23276 325 - 437 9.7e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 348 - 390 3.4e-11 PPR repeat family
PPR_1 PF12854 377 - 400 7.9e-06 PPR repeat
PPR_1 PF12854 411 - 439 7.5e-06 PPR repeat
PPR_2 PF13041 412 - 460 2.6e-11 PPR repeat family
PPR PF01535 414 - 442 5.7e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1404
AarI CACCTGC 1 cut(s) 1268
Acc36I ACCTGC 3 cut(s) 620, 1268, 1818
AccI GTMKAC 1 cut(s) 1075
AciI CCGC 2 cut(s) 148, 858
AclI AACGTT 1 cut(s) 498
AcoI YGGCCR 1 cut(s) 1770
AcsI RAATTY 5 cut(s) 419, 459, 641, 818, 1664
AcuI CTGAAG 2 cut(s) 1041, 1802
AdeI CACNNNGTG 1 cut(s) 20
AfaI GTAC 5 cut(s) 619, 727, 915, 1122, 1370
AfiI CCNNNNNNNGG 3 cut(s) 150, 1063, 1844
AflIII ACRYGT 1 cut(s) 34
AluBI AGCT 8 cut(s) 358, 411, 673, 700, 831, 864, 1007, 1955
AluI AGCT 8 cut(s) 358, 411, 673, 700, 831, 864, 1007, 1955
Alw21I GWGCWC 1 cut(s) 89
Alw26I GTCTC 1 cut(s) 978
AlwNI CAGNNNCTG 2 cut(s) 605, 1796
AoxI GGCC 3 cut(s) 188, 1554, 1770
ApeKI GCWGC 7 cut(s) 45, 119, 154, 408, 622, 700, 1936
ApoI RAATTY 5 cut(s) 419, 459, 641, 818, 1664
AspS9I GGNCC 2 cut(s) 1555, 1807
AsuC2I CCSGG 2 cut(s) 1635, 1839
AsuHPI GGTGA 2 cut(s) 563, 1292
AsuII TTCGAA 1 cut(s) 659
AvaII GGWCC 1 cut(s) 1807
BalI TGGCCA 1 cut(s) 1772
BanII GRGCYC 1 cut(s) 144
BarI GAAGNNNNNNTAC 2 cut(s) 792, 824
Bbv12I GWGCWC 1 cut(s) 89
BbvI GCAGC 7 cut(s) 32, 106, 166, 420, 609, 687, 1948
BccI CCATC 9 cut(s) 333, 545, 581, 700, 1042, 1124, 1724, 1762, 1917
BcgI CGANNNNNNTGC 2 cut(s) 1530, 1564
BclI TGATCA 1 cut(s) 1750
BcnI CCSGG 2 cut(s) 1635, 1839
BcoDI GTCTC 1 cut(s) 978
BfaI CTAG 5 cut(s) 174, 213, 455, 674, 1583
BfmI CTRYAG 5 cut(s) 613, 701, 903, 1141, 1826
BfuAI ACCTGC 3 cut(s) 620, 1268, 1818
BisI GCNGC 7 cut(s) 46, 120, 155, 409, 623, 701, 1937
BlsI GCNGC 7 cut(s) 47, 121, 156, 410, 624, 702, 1938
BmcAI AGTACT 1 cut(s) 1370
Bme1390I CCNGG 2 cut(s) 1635, 1839
Bme18I GGWCC 1 cut(s) 1807
BmgT120I GGNCC 2 cut(s) 1555, 1807
BmrFI CCNGG 2 cut(s) 1635, 1839
Bpu10I CCTNAGC 3 cut(s) 1062, 1203, 1526
Bpu14I TTCGAA 1 cut(s) 659
BpuMI CCSGG 2 cut(s) 1635, 1839
BsaJI CCNNGG 4 cut(s) 80, 1168, 1410, 1634
Bsc4I CCNNNNNNNGG 3 cut(s) 150, 1063, 1844
Bse118I RCCGGY 1 cut(s) 150
Bse1I ACTGG 1 cut(s) 1005
Bse3DI GCAATG 1 cut(s) 1914
BseDI CCNNGG 4 cut(s) 80, 1168, 1410, 1634
BseGI GGATG 7 cut(s) 333, 375, 592, 802, 1057, 1324, 1839
BseLI CCNNNNNNNGG 3 cut(s) 150, 1063, 1844
BseMI GCAATG 1 cut(s) 1914
BseMII CTCAG 3 cut(s) 84, 1298, 1911
BseNI ACTGG 1 cut(s) 1005
BseXI GCAGC 7 cut(s) 32, 106, 166, 420, 609, 687, 1948
BseYI CCCAGC 2 cut(s) 354, 1067
BshFI GGCC 3 cut(s) 190, 1556, 1772
BsiHKAI GWGCWC 1 cut(s) 89
BsiSI CCGG 3 cut(s) 151, 1634, 1838
BsiWI CGTACG 1 cut(s) 1120
BslFI GGGAC 1 cut(s) 1854
BslI CCNNNNNNNGG 3 cut(s) 150, 1063, 1844
BsmAI GTCTC 1 cut(s) 978
BsmFI GGGAC 1 cut(s) 1854
BsmI GAATGC 2 cut(s) 310, 471
BsnI GGCC 3 cut(s) 190, 1556, 1772
Bsp119I TTCGAA 1 cut(s) 659
Bsp1286I GDGCHC 2 cut(s) 89, 144
Bsp143I GATC 4 cut(s) 346, 1124, 1257, 1750
Bsp19I CCATGG 1 cut(s) 1410
BspACI CCGC 2 cut(s) 148, 858
BspANI GGCC 3 cut(s) 190, 1556, 1772
BspCNI CTCAG 3 cut(s) 83, 1299, 1912
BspHI TCATGA 2 cut(s) 1149, 1561
BspMAI CTGCAG 2 cut(s) 705, 907
BspMI ACCTGC 3 cut(s) 620, 1268, 1818
BspQI GCTCTTC 1 cut(s) 425
BspT104I TTCGAA 1 cut(s) 659
BsrDI GCAATG 1 cut(s) 1914
BsrFI RCCGGY 1 cut(s) 150
BsrI ACTGG 1 cut(s) 1005
BssAI RCCGGY 1 cut(s) 150
BssECI CCNNGG 4 cut(s) 80, 1168, 1410, 1634
BssMI GATC 4 cut(s) 346, 1124, 1257, 1750
BssNAI GTATAC 1 cut(s) 1076
BssT1I CCWWGG 2 cut(s) 80, 1410
Bst1107I GTATAC 1 cut(s) 1076
Bst4CI ACNGT 6 cut(s) 243, 653, 1040, 1145, 1830, 1855
Bst6I CTCTTC 1 cut(s) 425
BstBI TTCGAA 1 cut(s) 659
BstC8I GCNNGC 4 cut(s) 152, 627, 1398, 1653
BstDEI CTNAG 7 cut(s) 70, 1062, 1203, 1307, 1526, 1647, 1920
BstDSI CCRYGG 1 cut(s) 1410
BstENI CCTNNNNNAGG 1 cut(s) 1061
BstF5I GGATG 7 cut(s) 333, 375, 592, 802, 1057, 1324, 1839
BstKTI GATC 4 cut(s) 349, 1127, 1260, 1753
BstMAI GTCTC 1 cut(s) 978
BstMBI GATC 4 cut(s) 346, 1124, 1257, 1750
BstMWI GCNNNNNNNGC 2 cut(s) 743, 1933
BstNSI RCATGY 3 cut(s) 38, 1396, 1423
BstSCI CCNGG 2 cut(s) 1633, 1837
BstSFI CTRYAG 5 cut(s) 613, 701, 903, 1141, 1826
BstV1I GCAGC 7 cut(s) 32, 106, 166, 420, 609, 687, 1948
BstZ17I GTATAC 1 cut(s) 1076
BsuRI GGCC 3 cut(s) 190, 1556, 1772
BtgI CCRYGG 1 cut(s) 1410
BtsCI GGATG 7 cut(s) 333, 375, 592, 802, 1057, 1324, 1839
BtsIMutI CAGTG 2 cut(s) 78, 1835
BveI ACCTGC 3 cut(s) 620, 1268, 1818
Cac8I GCNNGC 4 cut(s) 152, 627, 1398, 1653
CaiI CAGNNNCTG 2 cut(s) 605, 1796
CciI TCATGA 2 cut(s) 1149, 1561
Cfr10I RCCGGY 1 cut(s) 150
Cfr13I GGNCC 2 cut(s) 1555, 1807
CseI GACGC 1 cut(s) 384
Csp6I GTAC 5 cut(s) 618, 726, 914, 1121, 1369
CspCI CAANNNNNGTGG 2 cut(s) 112, 147
CviQI GTAC 5 cut(s) 618, 726, 914, 1121, 1369
DdeI CTNAG 7 cut(s) 70, 1062, 1203, 1307, 1526, 1647, 1920
DpnI GATC 4 cut(s) 348, 1126, 1259, 1752
DpnII GATC 4 cut(s) 346, 1124, 1257, 1750
DraIII CACNNNGTG 1 cut(s) 20
EaeI YGGCCR 1 cut(s) 1770
Eam1104I CTCTTC 1 cut(s) 425
EarI CTCTTC 1 cut(s) 425
EciI GGCGGA 1 cut(s) 137
Eco130I CCWWGG 2 cut(s) 80, 1410
Eco147I AGGCCT 1 cut(s) 190
Eco24I GRGCYC 1 cut(s) 144
Eco32I GATATC 1 cut(s) 1947
Eco47I GGWCC 1 cut(s) 1807
Eco57I CTGAAG 2 cut(s) 1041, 1802
EcoNI CCTNNNNNAGG 1 cut(s) 1061
EcoO109I RGGNCCY 2 cut(s) 1555, 1807
EcoRI GAATTC 1 cut(s) 818
EcoRV GATATC 1 cut(s) 1947
EcoT14I CCWWGG 2 cut(s) 80, 1410
EcoT38I GRGCYC 1 cut(s) 144
ErhI CCWWGG 2 cut(s) 80, 1410
FaqI GGGAC 1 cut(s) 1854
FauI CCCGC 1 cut(s) 851
FauNDI CATATG 2 cut(s) 506, 1941
FbaI TGATCA 1 cut(s) 1750
FblI GTMKAC 1 cut(s) 1075
Fnu4HI GCNGC 7 cut(s) 46, 120, 155, 409, 623, 701, 1937
FokI GGATG 7 cut(s) 340, 382, 599, 809, 1064, 1331, 1846
FriOI GRGCYC 1 cut(s) 144
Fsp4HI GCNGC 7 cut(s) 46, 120, 155, 409, 623, 701, 1937
FspBI CTAG 5 cut(s) 174, 213, 455, 674, 1583
GluI GCNGC 7 cut(s) 46, 120, 155, 409, 623, 701, 1937
GsaI CCCAGC 2 cut(s) 358, 1071
HaeIII GGCC 3 cut(s) 190, 1556, 1772
HapII CCGG 3 cut(s) 151, 1634, 1838
HgaI GACGC 1 cut(s) 384
HindIII AAGCTT 2 cut(s) 1005, 1953
HinfI GANTC 4 cut(s) 257, 482, 1570, 1859
HpaII CCGG 3 cut(s) 151, 1634, 1838
HphI GGTGA 2 cut(s) 563, 1292
Hpy166II GTNNAC 3 cut(s) 502, 728, 1076
Hpy188I TCNGA 7 cut(s) 169, 250, 959, 1129, 1501, 1767, 1792
Hpy188III TCNNGA 9 cut(s) 131, 296, 476, 535, 680, 981, 1150, 1562, 1744
Hpy8I GTNNAC 3 cut(s) 502, 728, 1076
Hpy99I CGWCG 1 cut(s) 400
HpyCH4III ACNGT 6 cut(s) 243, 653, 1040, 1145, 1830, 1855
HpyCH4IV ACGT 2 cut(s) 498, 1780
HpyF10VI GCNNNNNNNGC 2 cut(s) 743, 1933
HpyF3I CTNAG 7 cut(s) 70, 1062, 1203, 1307, 1526, 1647, 1920
HpySE526I ACGT 2 cut(s) 498, 1780
KroI GCCGGC 1 cut(s) 150
KroNI GCCGGC 1 cut(s) 152
Ksp22I TGATCA 1 cut(s) 1750
Kzo9I GATC 4 cut(s) 346, 1124, 1257, 1750
LguI GCTCTTC 1 cut(s) 425
LmnI GCTCC 2 cut(s) 84, 861
Lsp1109I GCAGC 7 cut(s) 32, 106, 166, 420, 609, 687, 1948
MaeI CTAG 5 cut(s) 174, 213, 455, 674, 1583
MaeII ACGT 2 cut(s) 498, 1780
MaeIII GTNAC 4 cut(s) 73, 181, 607, 1821
MalI GATC 4 cut(s) 348, 1126, 1259, 1752
MboI GATC 4 cut(s) 346, 1124, 1257, 1750
MboII GAAGA 5 cut(s) 221, 442, 1034, 1579, 1808
MfeI CAATTG 1 cut(s) 1725
MhlI GDGCHC 2 cut(s) 89, 144
MlsI TGGCCA 1 cut(s) 1772
MluNI TGGCCA 1 cut(s) 1772
MmeI TCCRAC 2 cut(s) 55, 262
Mox20I TGGCCA 1 cut(s) 1772
MroNI GCCGGC 1 cut(s) 150
MscI TGGCCA 1 cut(s) 1772
MseI TTAA 5 cut(s) 561, 593, 783, 1325, 1466
Msp20I TGGCCA 1 cut(s) 1772
MspA1I CMGCKG 1 cut(s) 858
MspI CCGG 3 cut(s) 151, 1634, 1838
MspR9I CCNGG 2 cut(s) 1635, 1839
MunI CAATTG 1 cut(s) 1725
Mva1269I GAATGC 2 cut(s) 310, 471
MwoI GCNNNNNNNGC 2 cut(s) 743, 1933
NaeI GCCGGC 1 cut(s) 152
NciI CCSGG 2 cut(s) 1635, 1839
NcoI CCATGG 1 cut(s) 1410
NdeI CATATG 2 cut(s) 506, 1941
NdeII GATC 4 cut(s) 346, 1124, 1257, 1750
NgoMIV GCCGGC 1 cut(s) 150
NmeAIII GCCGAG 1 cut(s) 1193
NmuCI GTSAC 2 cut(s) 73, 181
NspI RCATGY 3 cut(s) 38, 1396, 1423
NspV TTCGAA 1 cut(s) 659
PagI TCATGA 2 cut(s) 1149, 1561
PaqCI CACCTGC 1 cut(s) 1268
PceI AGGCCT 1 cut(s) 190
PciI ACATGT 1 cut(s) 34
PciSI GCTCTTC 1 cut(s) 425
PctI GAATGC 2 cut(s) 310, 471
PdiI GCCGGC 1 cut(s) 152
PfeI GAWTC 4 cut(s) 257, 482, 1570, 1859
Pfl23II CGTACG 1 cut(s) 1120
PkrI GCNGC 7 cut(s) 47, 121, 156, 410, 624, 702, 1938
PpuMI RGGWCCY 1 cut(s) 1807
PscI ACATGT 1 cut(s) 34
PsiI TTATAA 1 cut(s) 1404
Psp1406I AACGTT 1 cut(s) 498
Psp5II RGGWCCY 1 cut(s) 1807
PspFI CCCAGC 2 cut(s) 354, 1067
PspLI CGTACG 1 cut(s) 1120
PspPI GGNCC 2 cut(s) 1555, 1807
PspPPI RGGWCCY 1 cut(s) 1807
PstI CTGCAG 2 cut(s) 705, 907
PstNI CAGNNNCTG 2 cut(s) 605, 1796
RsaI GTAC 5 cut(s) 619, 727, 915, 1122, 1370
RsaNI GTAC 5 cut(s) 618, 726, 914, 1121, 1369
SapI GCTCTTC 1 cut(s) 425
SaqAI TTAA 5 cut(s) 561, 593, 783, 1325, 1466
SatI GCNGC 7 cut(s) 46, 120, 155, 409, 623, 701, 1937
Sau3AI GATC 4 cut(s) 346, 1124, 1257, 1750
Sau96I GGNCC 2 cut(s) 1555, 1807
ScaI AGTACT 1 cut(s) 1370
ScrFI CCNGG 2 cut(s) 1635, 1839
SduI GDGCHC 2 cut(s) 89, 144
SfcI CTRYAG 5 cut(s) 613, 701, 903, 1141, 1826
SfuI TTCGAA 1 cut(s) 659
SinI GGWCC 1 cut(s) 1807
SseBI AGGCCT 1 cut(s) 190
SsiI CCGC 2 cut(s) 148, 858
SspI AATATT 1 cut(s) 206
SspMI CTAG 5 cut(s) 174, 213, 455, 674, 1583
StuI AGGCCT 1 cut(s) 190
StyD4I CCNGG 2 cut(s) 1633, 1837
StyI CCWWGG 2 cut(s) 80, 1410
TaaI ACNGT 6 cut(s) 243, 653, 1040, 1145, 1830, 1855
TaiI ACGT 2 cut(s) 501, 1783
TaqI TCGA 1 cut(s) 659
TatI WGTACW 1 cut(s) 1368
TfiI GAWTC 4 cut(s) 257, 482, 1570, 1859
Tru1I TTAA 5 cut(s) 561, 593, 783, 1325, 1466
Tru9I TTAA 5 cut(s) 561, 593, 783, 1325, 1466
TscAI CASTG 2 cut(s) 78, 1835
TseFI GTSAC 2 cut(s) 73, 181
TseI GCWGC 7 cut(s) 45, 119, 154, 408, 622, 700, 1936
Tsp45I GTSAC 2 cut(s) 73, 181
TspGWI ACGGA 2 cut(s) 43, 1108
TspRI CASTG 2 cut(s) 78, 1835
VpaK11BI GGWCC 1 cut(s) 1807
XagI CCTNNNNNAGG 1 cut(s) 1061
XapI RAATTY 5 cut(s) 419, 459, 641, 818, 1664
XceI RCATGY 3 cut(s) 38, 1396, 1423
XcmI CCANNNNNNNNNTGG 1 cut(s) 205
XmiI GTMKAC 1 cut(s) 1075
XspI CTAG 5 cut(s) 174, 213, 455, 674, 1583
ZrmI AGTACT 1 cut(s) 1370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.