Rroxscaffold_3G00236270

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000129
Physical Location & Seq
Reverse (-)
23459990 .. 23467426
7437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00236270.1

Sequence Viewer

Length: 1464 bp
ATGAAAGGCTTGCTGGAGCTTCATTTAGATGGGACTAGTATTGAGGAATTGCCTCTATCAGTTGAAGGTTTGACTGGTCTAACCACATTAAATTTAACAGATTGTAAAAACCTTTTGCGTCTCCCCAGTACCGTTCAGTCCTTGACATCTTTGAAAAGTCTCATTCTAACAGGTTGTTCAAAACTTGATGGGATAACTGAGAATCTGAATCATGTGGAATGCCTGGAGAAGCTTAATATAGGAGGAACTGCAATAAGAGATTTCTCATTCCTTGTAGGTATGAAGAATTTGAATGGTCTATACTGCCGAGGATGTAAAGGTCTAGCTTTAGGATCATGGAAAGGTCATTCTGAAAGTTTGTTGTTTCCTGCTCTATTATCCAGTTTGACTTCTTTGGTAGAGCTAGATTTAAGGGATTGCAATCTGATGGATGGAGCCATTCCCAATGATCTTAGCAGCTTAATCTCTTTAAGAGAATTAGGTTTAGGTGGTAATAGTTTTGTTCGATTACCTGAAAGTATCTCTCAACTCTCAAAGCTCGAGAAATTAGAGTTGAGCAATTGTAAACAGCTTCAGTTGGTGCCCAAGCTTCCATCAAGTGCTCGACTGGTGCTTGCGGAAGATTGTACTTCACTGATAGATTTCCCAAATCAAATCAAATTATTACCTTCAATTGAGTCTGGGATGACTACTATCAATTCACTCAGTTCTGCAAGTAGTTCAGCACTTAGAGACTCGCATGGTTTCAGTACGTGGAAATCTTCAGCAAATGCCCAACCTTCTGAGGTGCTTTTGACACATGAGCATACAGAGTGGAAACGAGTTGATCAAGTGTCACTGCCACTTCCAATGCTTATGAAAGACATTGAACTTTCTGATCCATCATCAAAACCCAGTGATATCATTTATTTTGATAATGAAATTCCAGAGTGGTTCAGCACTATATCTACCAGCAATCCTATATCAATCTCTATACCTCCAGATCTGACAGATGATGACAAGTGGAAGGGGGTTACAATGTGTGCTGTTTTTGCAGTCAAGGGACATACTGTTCTCTCTGTTATTGAATCGGATTTAGAACTTTCAAACTACTACTATCAGTGCACAATGGAAACAGATGTTTTTCGTATGAAACCATTCATCTTTGACGGGGAAGAAATCCGCCACCTTCGATCAAGTTCTCATCTGGTTTTGATTTCCTATGTAGCTAGATGGCAGTTTCCAAAATGGGAGTTAAATCAATCAACCATGGTGGCGGCTAAATTTGAAACAAACAATCCATTCATGGAGGTCCAGAAATGTGGGATTCGTCTAGTTTATGAGCAAGATGCTGGATGGTATACCAAACTATTCCCTGGGGTTAATGCAATTTGTCTAAATGAAGTGATGGATGCTATGCTGAAAACTGGCTGGCTAAGGGCATCTCCAACAGACTCCTTATTTCAAAATAATTTAAAATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

487

Amino Acids

54.06

Weight (kDa)

5.15

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 7 - 100 1.4e-08 Leucine-rich repeat region
LRR_14 PF23598 125 - 200 2.1e-07 Leucine-rich repeat region
C-JID PF20160 306 - 444 9.2e-10 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 580
AccI GTMKAC 1 cut(s) 1340
AciI CCGC 3 cut(s) 617, 1162, 1256
AclWI GGATC 2 cut(s) 340, 872
AcsI RAATTY 5 cut(s) 91, 286, 921, 1262, 1457
AcuI CTGAAG 2 cut(s) 557, 747
AfaI GTAC 3 cut(s) 130, 628, 751
AhlI ACTAGT 1 cut(s) 35
AjnI CCWGG 2 cut(s) 222, 1354
AloI GAACNNNNNNTCC 2 cut(s) 1035, 1067
AluBI AGCT 9 cut(s) 19, 232, 326, 403, 459, 538, 571, 589, 1208
AluI AGCT 9 cut(s) 19, 232, 326, 403, 459, 538, 571, 589, 1208
Alw21I GWGCWC 2 cut(s) 604, 1106
Alw26I GTCTC 3 cut(s) 125, 164, 726
Alw44I GTGCAC 1 cut(s) 1102
AlwI GGATC 2 cut(s) 340, 872
Ama87I CYCGRG 1 cut(s) 539
ApaLI GTGCAC 1 cut(s) 1102
ApeKI GCWGC 1 cut(s) 456
ApoI RAATTY 5 cut(s) 91, 286, 921, 1262, 1457
Asp700I GAANNNNTTC 1 cut(s) 1136
AspS9I GGNCC 1 cut(s) 1291
AvaI CYCGRG 1 cut(s) 539
AvaII GGWCC 1 cut(s) 1291
BaeGI GKGCMC 2 cut(s) 585, 1106
BanI GGYRCC 1 cut(s) 580
Bbv12I GWGCWC 2 cut(s) 604, 1106
BbvI GCAGC 1 cut(s) 468
BccI CCATC 9 cut(s) 23, 182, 421, 425, 601, 889, 1206, 1329, 1381
BciT130I CCWGG 2 cut(s) 224, 1356
BclI TGATCA 1 cut(s) 826
BcoDI GTCTC 3 cut(s) 125, 164, 726
BcuI ACTAGT 1 cut(s) 35
BfaI CTAG 5 cut(s) 36, 323, 404, 1209, 1313
BglII AGATCT 1 cut(s) 982
BisI GCNGC 2 cut(s) 457, 1257
BlsI GCNGC 2 cut(s) 458, 1258
Bme1390I CCNGG 2 cut(s) 224, 1356
Bme18I GGWCC 1 cut(s) 1291
BmeT110I CYCGRG 1 cut(s) 539
BmgT120I GGNCC 1 cut(s) 1291
BmiI GGNNCC 2 cut(s) 436, 582
BmrFI CCNGG 2 cut(s) 224, 1356
BmrI ACTGGG 2 cut(s) 120, 888
BmsI GCATC 3 cut(s) 1318, 1381, 1430
BmuI ACTGGG 2 cut(s) 120, 888
BpmI CTGGAG 3 cut(s) 35, 245, 963
Bpu10I CCTNAGC 1 cut(s) 1415
BsaAI YACGTR 1 cut(s) 753
BsaBI GATNNNNATC 1 cut(s) 420
BsaJI CCNNGG 4 cut(s) 307, 1248, 1354, 1355
Bse1I ACTGG 6 cut(s) 79, 126, 381, 612, 894, 1411
Bse8I GATNNNNATC 1 cut(s) 420
BseBI CCWGG 2 cut(s) 224, 1356
BseDI CCNNGG 4 cut(s) 307, 1248, 1354, 1355
BseGI GGATG 5 cut(s) 317, 436, 690, 1340, 1396
BseJI GATNNNNATC 1 cut(s) 420
BseMII CTCAG 3 cut(s) 189, 718, 774
BseNI ACTGG 6 cut(s) 79, 126, 381, 612, 894, 1411
BseSI GKGCMC 2 cut(s) 585, 1106
BseXI GCAGC 1 cut(s) 468
BshNI GGYRCC 1 cut(s) 580
BsiHKAI GWGCWC 2 cut(s) 604, 1106
BsiHKCI CYCGRG 1 cut(s) 539
BslFI GGGAC 2 cut(s) 46, 1056
BsmAI GTCTC 3 cut(s) 125, 164, 726
BsmBI CGTCTC 1 cut(s) 125
BsmFI GGGAC 2 cut(s) 46, 1056
BsmI GAATGC 1 cut(s) 224
BsoBI CYCGRG 1 cut(s) 539
Bsp1286I GDGCHC 3 cut(s) 585, 604, 1106
Bsp143I GATC 6 cut(s) 332, 448, 826, 877, 982, 1172
Bsp19I CCATGG 1 cut(s) 1248
BspACI CCGC 3 cut(s) 617, 1162, 1256
BspCNI CTCAG 3 cut(s) 190, 717, 775
BspLI GGNNCC 2 cut(s) 436, 582
BspPI GGATC 2 cut(s) 340, 872
BspT107I GGYRCC 1 cut(s) 580
BsrI ACTGG 6 cut(s) 79, 126, 381, 612, 894, 1411
BssECI CCNNGG 4 cut(s) 307, 1248, 1354, 1355
BssMI GATC 6 cut(s) 332, 448, 826, 877, 982, 1172
BssNAI GTATAC 1 cut(s) 1341
BssT1I CCWWGG 1 cut(s) 1248
Bst1107I GTATAC 1 cut(s) 1341
Bst2UI CCWGG 2 cut(s) 224, 1356
Bst4CI ACNGT 2 cut(s) 133, 1051
BstBAI YACGTR 1 cut(s) 753
BstC8I GCNNGC 3 cut(s) 11, 615, 1412
BstDEI CTNAG 6 cut(s) 198, 452, 704, 728, 783, 1415
BstDSI CCRYGG 1 cut(s) 1248
BstF5I GGATG 5 cut(s) 317, 436, 690, 1340, 1396
BstKTI GATC 6 cut(s) 335, 451, 829, 880, 985, 1175
BstMAI GTCTC 3 cut(s) 125, 164, 726
BstMBI GATC 6 cut(s) 332, 448, 826, 877, 982, 1172
BstMWI GCNNNNNNNGC 1 cut(s) 1031
BstNI CCWGG 2 cut(s) 224, 1356
BstSCI CCNGG 2 cut(s) 222, 1354
BstSLI GKGCMC 2 cut(s) 585, 1106
BstV1I GCAGC 1 cut(s) 468
BstX2I RGATCY 1 cut(s) 982
BstXI CCANNNNNNTGG 1 cut(s) 1301
BstYI RGATCY 1 cut(s) 982
BstZ17I GTATAC 1 cut(s) 1341
BtgI CCRYGG 1 cut(s) 1248
BtsCI GGATG 5 cut(s) 317, 436, 690, 1340, 1396
BtsI GCAGTG 1 cut(s) 836
BtsIMutI CAGTG 4 cut(s) 632, 836, 901, 1106
Cac8I GCNNGC 3 cut(s) 11, 615, 1412
Cfr13I GGNCC 1 cut(s) 1291
CseI GACGC 1 cut(s) 107
Csp6I GTAC 3 cut(s) 129, 627, 750
CspCI CAANNNNNGTGG 2 cut(s) 1233, 1268
CviAII CATG 6 cut(s) 212, 336, 740, 800, 1249, 1285
CviQI GTAC 3 cut(s) 129, 627, 750
DdeI CTNAG 6 cut(s) 198, 452, 704, 728, 783, 1415
DpnI GATC 6 cut(s) 334, 450, 828, 879, 984, 1174
DpnII GATC 6 cut(s) 332, 448, 826, 877, 982, 1172
DraI TTTAAA 1 cut(s) 1455
EciI GGCGGA 1 cut(s) 1151
Eco130I CCWWGG 1 cut(s) 1248
Eco32I GATATC 1 cut(s) 901
Eco47I GGWCC 1 cut(s) 1291
Eco57I CTGAAG 2 cut(s) 557, 747
Eco88I CYCGRG 1 cut(s) 539
EcoRII CCWGG 2 cut(s) 222, 1354
EcoRV GATATC 1 cut(s) 901
EcoT14I CCWWGG 1 cut(s) 1248
ErhI CCWWGG 1 cut(s) 1248
Esp3I CGTCTC 1 cut(s) 125
FaeI CATG 6 cut(s) 215, 339, 743, 803, 1252, 1288
FaqI GGGAC 2 cut(s) 46, 1056
FatI CATG 6 cut(s) 211, 335, 739, 799, 1248, 1284
FbaI TGATCA 1 cut(s) 826
FblI GTMKAC 1 cut(s) 1340
Fnu4HI GCNGC 2 cut(s) 457, 1257
FokI GGATG 5 cut(s) 324, 443, 697, 1347, 1403
Fsp4HI GCNGC 2 cut(s) 457, 1257
FspBI CTAG 5 cut(s) 36, 323, 404, 1209, 1313
GluI GCNGC 2 cut(s) 457, 1257
GsuI CTGGAG 3 cut(s) 35, 245, 963
HgaI GACGC 1 cut(s) 107
Hin1II CATG 6 cut(s) 215, 339, 743, 803, 1252, 1288
HindIII AAGCTT 2 cut(s) 230, 587
HinfI GANTC 7 cut(s) 202, 208, 677, 734, 1067, 1306, 1433
Hpy166II GTNNAC 3 cut(s) 566, 1104, 1341
Hpy188I TCNGA 7 cut(s) 207, 352, 426, 784, 877, 987, 1072
Hpy188III TCNNGA 4 cut(s) 541, 926, 980, 1294
Hpy8I GTNNAC 3 cut(s) 566, 1104, 1341
HpyAV CCTTC 5 cut(s) 59, 678, 789, 1000, 1178
HpyCH4III ACNGT 2 cut(s) 133, 1051
HpyCH4IV ACGT 1 cut(s) 752
HpyCH4V TGCA 6 cut(s) 251, 420, 713, 1034, 1104, 1367
HpyF10VI GCNNNNNNNGC 1 cut(s) 1031
HpyF3I CTNAG 6 cut(s) 198, 452, 704, 728, 783, 1415
HpySE526I ACGT 1 cut(s) 752
Hsp92II CATG 6 cut(s) 215, 339, 743, 803, 1252, 1288
Ksp22I TGATCA 1 cut(s) 826
Kzo9I GATC 6 cut(s) 332, 448, 826, 877, 982, 1172
LmnI GCTCC 2 cut(s) 16, 434
Lsp1109I GCAGC 1 cut(s) 468
LweI GCATC 3 cut(s) 1318, 1381, 1430
MaeI CTAG 5 cut(s) 36, 323, 404, 1209, 1313
MaeII ACGT 1 cut(s) 752
MaeIII GTNAC 2 cut(s) 834, 1012
MalI GATC 6 cut(s) 334, 450, 828, 879, 984, 1174
MboI GATC 6 cut(s) 332, 448, 826, 877, 982, 1172
MboII GAAGA 4 cut(s) 295, 632, 753, 1166
MfeI CAATTG 2 cut(s) 559, 672
MflI RGATCY 1 cut(s) 982
MhlI GDGCHC 3 cut(s) 585, 604, 1106
MlyI GAGTC 3 cut(s) 686, 728, 1427
MmeI TCCRAC 1 cut(s) 1451
MnlI CCTC 7 cut(s) 37, 63, 236, 302, 778, 987, 1282
MroXI GAANNNNTTC 1 cut(s) 1136
MseI TTAA 9 cut(s) 89, 95, 234, 410, 461, 470, 1235, 1362, 1454
MslI CAYNNNNRTG 1 cut(s) 27
MspR9I CCNGG 2 cut(s) 224, 1356
MunI CAATTG 2 cut(s) 559, 672
Mva1269I GAATGC 1 cut(s) 224
MvaI CCWGG 2 cut(s) 224, 1356
MwoI GCNNNNNNNGC 1 cut(s) 1031
NcoI CCATGG 1 cut(s) 1248
NdeII GATC 6 cut(s) 332, 448, 826, 877, 982, 1172
NlaIII CATG 6 cut(s) 215, 339, 743, 803, 1252, 1288
NlaIV GGNNCC 2 cut(s) 436, 582
NmeAIII GCCGAG 1 cut(s) 332
NmuCI GTSAC 1 cut(s) 834
PaeR7I CTCGAG 1 cut(s) 539
PasI CCCWGGG 1 cut(s) 1355
PctI GAATGC 1 cut(s) 224
PdmI GAANNNNTTC 1 cut(s) 1136
PfeI GAWTC 4 cut(s) 202, 208, 1067, 1306
PkrI GCNGC 2 cut(s) 458, 1258
PleI GAGTC 3 cut(s) 685, 728, 1427
PpsI GAGTC 3 cut(s) 685, 728, 1427
Ppu21I YACGTR 1 cut(s) 753
Psp6I CCWGG 2 cut(s) 222, 1354
PspGI CCWGG 2 cut(s) 222, 1354
PspN4I GGNNCC 2 cut(s) 436, 582
PspPI GGNCC 1 cut(s) 1291
PsuI RGATCY 1 cut(s) 982
RsaI GTAC 3 cut(s) 130, 628, 751
RsaNI GTAC 3 cut(s) 129, 627, 750
RseI CAYNNNNRTG 1 cut(s) 27
SaqAI TTAA 9 cut(s) 89, 95, 234, 410, 461, 470, 1235, 1362, 1454
SatI GCNGC 2 cut(s) 457, 1257
Sau3AI GATC 6 cut(s) 332, 448, 826, 877, 982, 1172
Sau96I GGNCC 1 cut(s) 1291
SchI GAGTC 3 cut(s) 686, 728, 1427
ScrFI CCNGG 2 cut(s) 224, 1356
SduI GDGCHC 3 cut(s) 585, 604, 1106
SfaNI GCATC 3 cut(s) 1318, 1381, 1430
Sfr274I CTCGAG 1 cut(s) 539
SinI GGWCC 1 cut(s) 1291
SlaI CTCGAG 1 cut(s) 539
SmiMI CAYNNNNRTG 1 cut(s) 27
SmlI CTYRAG 1 cut(s) 539
SmoI CTYRAG 1 cut(s) 539
SpeI ACTAGT 1 cut(s) 35
SsiI CCGC 3 cut(s) 617, 1162, 1256
SspMI CTAG 5 cut(s) 36, 323, 404, 1209, 1313
StyD4I CCNGG 2 cut(s) 222, 1354
StyI CCWWGG 1 cut(s) 1248
TaaI ACNGT 2 cut(s) 133, 1051
TaiI ACGT 1 cut(s) 755
TaqI TCGA 4 cut(s) 505, 540, 604, 1171
TatI WGTACW 1 cut(s) 626
TauI GCSGC 1 cut(s) 1259
TfiI GAWTC 4 cut(s) 202, 208, 1067, 1306
Tru1I TTAA 9 cut(s) 89, 95, 234, 410, 461, 470, 1235, 1362, 1454
Tru9I TTAA 9 cut(s) 89, 95, 234, 410, 461, 470, 1235, 1362, 1454
TscAI CASTG 4 cut(s) 639, 843, 901, 1106
TseFI GTSAC 1 cut(s) 834
TseI GCWGC 1 cut(s) 456
Tsp45I GTSAC 1 cut(s) 834
TspDTI ATGAA 9 cut(s) 11, 17, 296, 872, 933, 1129, 1145, 1273, 1395
TspRI CASTG 4 cut(s) 639, 843, 901, 1106
VneI GTGCAC 1 cut(s) 1102
VpaK11BI GGWCC 1 cut(s) 1291
XapI RAATTY 5 cut(s) 91, 286, 921, 1262, 1457
XhoI CTCGAG 1 cut(s) 539
XmiI GTMKAC 1 cut(s) 1340
XmnI GAANNNNTTC 1 cut(s) 1136
XspI CTAG 5 cut(s) 36, 323, 404, 1209, 1313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.