Rh2DG318900

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000129
Physical Location & Seq
Reverse (-)
39611817 .. 39615006
3190 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG318900.1

Sequence Viewer

Length: 1719 bp
ATGAAATCATCCATGTACTTGGTCGAAATAGGGCGACGAGTGCAGTTCAAAGCATATTCCTCGAAGGGATGGAGCATGCTACGGCTTTTAAATCTGAGTGGTTCACCATACTTTAGGTCGACTCCAGACTTCACAGAGGTTCCTAATCTTGAAAACTTAGTGCTTCAAGATTGCACAAGTTTGGTGGAGATTCACCCGTCTCTTGGATTTCTGAAGAAACTTGTCTCTTTGAATATGAGAAATTGCAAGTCTATTAAGAGCATTCCACCTTTCATTACCTTGGAATCCCTTCAAATATTGAGGCTTTCACTCTGTTCAGGACTGAAGAAGTGTCCAGAGATTGAAGGAAATATGAAAATCTTGGTGAAGCTTCATTTGGATGGGACCAGCATTAAGGAATTGCCTCCGTCAATTGAAAGATTCACTGGTCTAACCATGTTGGATCTGACAGGTTGCTCCGAAATTGATGAGATACCTAATTATCTGAATGGTATGAAATGTCTGGAGATGCTTTCCATTGGTGGAACTTCCATAAGGGAGTTATCCTTTATTGAAGGCATGAAGAATCTACGGTATCTATCCTGCCGAGGATGTAATCGTCTAGTTTCAAAATCATGCAAAGGTCTGGCTTCGTTATCGAATTTGATACAGCTAGACTTGAGTTGCTGCAATCTGATGGATGGAGCCATTCTCAATGATCTTAGCAGCCTAATCTCCTTAAGATCGTTAGATTTAAGTGGTAATTGCTTTGTGCGATTATCTGAAAATATCTCTCGACTCTCAAAGCTTGAGACTCTGACCTTGAGTCATTGCAGACAGCTTCAATTGCTGCCCAAGAAGCTTCCTTTAAGTCTTCAGGACGTGTATGCACAAGATTGTACTTCACTGACGGATTACCCAAATCAAATCAAAGTATTACATCCATCAGAGTCGAGAACGACTATTGTCAATTGCCTCGATTCTTCAATAATTGGACTCTCACAAAGTTCCACAATATTCAGTTTTTTAAGAAATCAGGGAGAATCTATGCACATGTGTATGAAATTTAAGCATATAAAGGGGAAACAAGTTGATCATTCGCCAGTTGCAAATTTAGCGTTTCTAAAAGACAGTGAAGTATCGGTAGCGAGAAGCCTACCGTTTCTAAAAGACATTGAAATATCTTCCCGGTCAAAATTTTTTTGCATATCTCTTAAAGATGAAATTCCAGAGTGGTTCAGCACTATATCTACCAGAAATCACATATCAATCTCGATACCTCAAAATCTGGCTAATGATGACAAGTGGAAGGGATTTGCCACGTGTGCTATATTCTCAGTCAAGGGGCATACTGCTCTCTCCTTTATTGAATCGGATCCTGATTTTTCTAATTACTTGTATCAAATCACATTGGAAACTGATGTTGTGCGTCTGAAACCAGATGTGTTGGAACTGGAATTAGGCCCCTTTGGATCAAGTTCTCATCTGCGTGTGATTTTCTTTATATCTCGTTTGGAGGTTCCACAGCGGGTTTTAAATAAATCAACTGTGGTGAGGGTTATATTTGAAACCACCAATCCATCTGTGGTGGTCCAAATATGTGGAATTCGTCTAGTCTATGAGCAAGATGCTGGATGGTATACCAGAGTATCATATAACGAGGCGAATGATCCGATTTGTCTAAATGAAGTTGAGGATGAACTTAAGGACGCTGCCACTGGAGTCTGTGTGGCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

572

Amino Acids

64.04

Weight (kDa)

7.08

Isoelectric Point (pI)

46.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_13 PF23286 94 - 290 8.2e-12 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 97 - 200 3.3e-09 Leucine-rich repeat region
LRR_14 PF23598 209 - 281 3.8e-06 Leucine-rich repeat region
C-JID PF20160 400 - 537 2.8e-09 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 119, 1619
AciI CCGC 1 cut(s) 1507
AclWI GGATC 5 cut(s) 450, 1349, 1362, 1459, 1643
AcsI RAATTY 6 cut(s) 640, 1043, 1090, 1175, 1203, 1584
AcuI CTGAAG 3 cut(s) 233, 344, 839
AcvI CACGTG 1 cut(s) 1302
AfaI GTAC 2 cut(s) 17, 880
AfiI CCNNNNNNNGG 1 cut(s) 203
AflII CTTAAG 2 cut(s) 718, 1682
AflIII ACRYGT 3 cut(s) 861, 1032, 1301
AhdI GACNNNNNGTC 1 cut(s) 804
AjiI CACGTC 1 cut(s) 862
AjuI GAANNNNNNNTTGG 2 cut(s) 359, 391
AluBI AGCT 5 cut(s) 370, 652, 787, 820, 841
AluI AGCT 5 cut(s) 370, 652, 787, 820, 841
Alw26I GTCTC 3 cut(s) 204, 229, 785
AlwI GGATC 5 cut(s) 450, 1349, 1362, 1459, 1643
AoxI GGCC 1 cut(s) 1441
ApeKI GCWGC 4 cut(s) 666, 705, 829, 1691
ApoI RAATTY 6 cut(s) 640, 1043, 1090, 1175, 1203, 1584
Asp700I GAANNNNTTC 1 cut(s) 288
AspS9I GGNCC 3 cut(s) 384, 1442, 1570
AsuC2I CCSGG 1 cut(s) 1168
AsuHPI GGTGA 4 cut(s) 96, 185, 376, 1543
AvaII GGWCC 2 cut(s) 384, 1570
BaeI ACNNNNGTAYC 2 cut(s) 1611, 1644
BamHI GGATCC 1 cut(s) 1354
BbrPI CACGTG 1 cut(s) 1302
BbsI GAAGAC 1 cut(s) 845
BbvI GCAGC 4 cut(s) 653, 717, 816, 1678
BccI CCATC 7 cut(s) 63, 374, 670, 674, 931, 1567, 1608
BceAI ACGGC 1 cut(s) 98
BcgI CGANNNNNNTGC 2 cut(s) 42, 76
BclI TGATCA 1 cut(s) 1072
BcnI CCSGG 1 cut(s) 1168
BcoDI GTCTC 3 cut(s) 204, 229, 785
BfaI CTAG 3 cut(s) 602, 653, 1592
BfrI CTTAAG 2 cut(s) 718, 1682
BisI GCNGC 4 cut(s) 667, 706, 830, 1692
BlsI GCNGC 4 cut(s) 668, 707, 831, 1693
Bme1390I CCNGG 1 cut(s) 1168
Bme18I GGWCC 2 cut(s) 384, 1570
BmeRI GACNNNNNGTC 1 cut(s) 804
BmgBI CACGTC 1 cut(s) 862
BmgT120I GGNCC 3 cut(s) 384, 1442, 1570
BmiI GGNNCC 6 cut(s) 141, 385, 685, 1356, 1444, 1500
BmrFI CCNGG 1 cut(s) 1168
BmsI GCATC 2 cut(s) 498, 1597
BoxI GACNNNNGTC 1 cut(s) 944
BpiI GAAGAC 1 cut(s) 845
BplI GAGNNNNNCTC 2 cut(s) 675, 707
BpmI CTGGAG 3 cut(s) 108, 524, 1719
BpuEI CTTGAG 3 cut(s) 679, 809, 823
BpuMI CCSGG 1 cut(s) 1168
BsaAI YACGTR 1 cut(s) 1302
BsaJI CCNNGG 2 cut(s) 279, 586
BsaXI ACNNNNNCTCC 1 cut(s) 1692
Bsc4I CCNNNNNNNGG 1 cut(s) 203
Bse1I ACTGG 4 cut(s) 430, 1082, 1437, 1702
Bse3DI GCAATG 1 cut(s) 808
BseDI CCNNGG 2 cut(s) 279, 586
BseGI GGATG 8 cut(s) 8, 74, 385, 596, 685, 919, 1619, 1681
BseLI CCNNNNNNNGG 1 cut(s) 203
BseMI GCAATG 1 cut(s) 808
BseMII CTCAG 2 cut(s) 86, 1329
BseNI ACTGG 4 cut(s) 430, 1082, 1437, 1702
BseXI GCAGC 4 cut(s) 653, 717, 816, 1678
BsgI GTGCAG 1 cut(s) 62
BshFI GGCC 1 cut(s) 1443
BsiSI CCGG 1 cut(s) 1168
BslFI GGGAC 1 cut(s) 397
BslI CCNNNNNNNGG 1 cut(s) 203
BsmAI GTCTC 3 cut(s) 204, 229, 785
BsmBI CGTCTC 1 cut(s) 204
BsmFI GGGAC 1 cut(s) 397
BsmI GAATGC 1 cut(s) 261
BsnI GGCC 1 cut(s) 1443
Bsp143I GATC 7 cut(s) 442, 697, 722, 1072, 1354, 1451, 1648
BspACI CCGC 1 cut(s) 1507
BspANI GGCC 1 cut(s) 1443
BspCNI CTCAG 2 cut(s) 87, 1328
BspLI GGNNCC 6 cut(s) 141, 385, 685, 1356, 1444, 1500
BspPI GGATC 5 cut(s) 450, 1349, 1362, 1459, 1643
BspTI CTTAAG 2 cut(s) 718, 1682
BsrDI GCAATG 1 cut(s) 808
BsrI ACTGG 4 cut(s) 430, 1082, 1437, 1702
BssECI CCNNGG 2 cut(s) 279, 586
BssMI GATC 7 cut(s) 442, 697, 722, 1072, 1354, 1451, 1648
BssNAI GTATAC 1 cut(s) 1620
BssT1I CCWWGG 1 cut(s) 279
Bst1107I GTATAC 1 cut(s) 1620
Bst4CI ACNGT 4 cut(s) 573, 1112, 1140, 1528
BstAFI CTTAAG 2 cut(s) 718, 1682
BstBAI YACGTR 1 cut(s) 1302
BstC8I GCNNGC 1 cut(s) 77
BstDEI CTNAG 4 cut(s) 95, 157, 701, 1315
BstF5I GGATG 8 cut(s) 8, 74, 385, 596, 685, 919, 1619, 1681
BstKTI GATC 7 cut(s) 445, 700, 725, 1075, 1357, 1454, 1651
BstMAI GTCTC 3 cut(s) 204, 229, 785
BstMBI GATC 7 cut(s) 442, 697, 722, 1072, 1354, 1451, 1648
BstMWI GCNNNNNNNGC 5 cut(s) 40, 826, 838, 1094, 1304
BstNSI RCATGY 2 cut(s) 79, 1036
BstPAI GACNNNNGTC 1 cut(s) 944
BstSCI CCNGG 1 cut(s) 1166
BstV1I GCAGC 4 cut(s) 653, 717, 816, 1678
BstV2I GAAGAC 1 cut(s) 845
BstX2I RGATCY 2 cut(s) 442, 1354
BstXI CCANNNNNNTGG 2 cut(s) 19, 1580
BstYI RGATCY 2 cut(s) 442, 1354
BstZ17I GTATAC 1 cut(s) 1620
BsuRI GGCC 1 cut(s) 1443
BtrI CACGTC 1 cut(s) 862
BtsCI GGATG 8 cut(s) 8, 74, 385, 596, 685, 919, 1619, 1681
BtsIMutI CAGTG 4 cut(s) 423, 884, 1117, 1695
Cac8I GCNNGC 1 cut(s) 77
Cfr13I GGNCC 3 cut(s) 384, 1442, 1570
CseI GACGC 2 cut(s) 1397, 1697
Csp6I GTAC 2 cut(s) 16, 879
CspCI CAANNNNNGTGG 2 cut(s) 165, 200
CviAII CATG 6 cut(s) 13, 76, 436, 559, 615, 1033
CviQI GTAC 2 cut(s) 16, 879
DdeI CTNAG 4 cut(s) 95, 157, 701, 1315
DpnI GATC 7 cut(s) 444, 699, 724, 1074, 1356, 1453, 1650
DpnII GATC 7 cut(s) 442, 697, 722, 1072, 1354, 1451, 1648
DraI TTTAAA 2 cut(s) 90, 1515
DriI GACNNNNNGTC 1 cut(s) 804
Eam1105I GACNNNNNGTC 1 cut(s) 804
Eco130I CCWWGG 1 cut(s) 279
Eco47I GGWCC 2 cut(s) 384, 1570
Eco57I CTGAAG 3 cut(s) 233, 344, 839
Eco72I CACGTG 1 cut(s) 1302
EcoO109I RGGNCCY 1 cut(s) 1442
EcoRI GAATTC 1 cut(s) 1584
EcoT14I CCWWGG 1 cut(s) 279
ErhI CCWWGG 1 cut(s) 279
Esp3I CGTCTC 1 cut(s) 204
FaeI CATG 6 cut(s) 16, 79, 439, 562, 618, 1036
FaqI GGGAC 1 cut(s) 397
FatI CATG 6 cut(s) 12, 75, 435, 558, 614, 1032
FauI CCCGC 1 cut(s) 1500
FbaI TGATCA 1 cut(s) 1072
FblI GTMKAC 2 cut(s) 119, 1619
Fnu4HI GCNGC 4 cut(s) 667, 706, 830, 1692
FokI GGATG 7 cut(s) 81, 392, 603, 692, 906, 1626, 1688
Fsp4HI GCNGC 4 cut(s) 667, 706, 830, 1692
FspBI CTAG 3 cut(s) 602, 653, 1592
GluI GCNGC 4 cut(s) 667, 706, 830, 1692
GsuI CTGGAG 3 cut(s) 108, 524, 1719
HaeIII GGCC 1 cut(s) 1443
HapII CCGG 1 cut(s) 1168
HgaI GACGC 2 cut(s) 1397, 1697
Hin1II CATG 6 cut(s) 16, 79, 439, 562, 618, 1036
HincII GTYRAC 1 cut(s) 120
HindII GTYRAC 1 cut(s) 120
HindIII AAGCTT 3 cut(s) 368, 785, 839
HpaII CCGG 1 cut(s) 1168
HphI GGTGA 4 cut(s) 96, 185, 376, 1543
Hpy166II GTNNAC 3 cut(s) 104, 120, 1620
Hpy8I GTNNAC 3 cut(s) 104, 120, 1620
Hpy99I CGWCG 1 cut(s) 39
HpyAV CCTTC 5 cut(s) 58, 299, 338, 548, 1282
HpyCH4III ACNGT 4 cut(s) 573, 1112, 1140, 1528
HpyCH4IV ACGT 2 cut(s) 861, 1301
HpyF10VI GCNNNNNNNGC 5 cut(s) 40, 826, 838, 1094, 1304
HpyF3I CTNAG 4 cut(s) 95, 157, 701, 1315
HpySE526I ACGT 2 cut(s) 861, 1301
Hsp92II CATG 6 cut(s) 16, 79, 439, 562, 618, 1036
Ksp22I TGATCA 1 cut(s) 1072
Kzo9I GATC 7 cut(s) 442, 697, 722, 1072, 1354, 1451, 1648
LmnI GCTCC 3 cut(s) 72, 461, 683
Lsp1109I GCAGC 4 cut(s) 653, 717, 816, 1678
LweI GCATC 2 cut(s) 498, 1597
MaeI CTAG 3 cut(s) 602, 653, 1592
MaeII ACGT 2 cut(s) 861, 1301
MalI GATC 7 cut(s) 444, 699, 724, 1074, 1356, 1453, 1650
MboI GATC 7 cut(s) 442, 697, 722, 1072, 1354, 1451, 1648
MboII GAAGA 6 cut(s) 226, 337, 574, 845, 954, 1155
MfeI CAATTG 3 cut(s) 411, 824, 949
MflI RGATCY 2 cut(s) 442, 1354
MlyI GAGTC 7 cut(s) 115, 771, 787, 814, 938, 969, 1710
MmeI TCCRAC 2 cut(s) 420, 1407
MroXI GAANNNNTTC 1 cut(s) 288
MslI CAYNNNNRTG 3 cut(s) 378, 1037, 1467
MspA1I CMGCKG 1 cut(s) 1507
MspCI CTTAAG 2 cut(s) 718, 1682
MspI CCGG 1 cut(s) 1168
MspR9I CCNGG 1 cut(s) 1168
MunI CAATTG 3 cut(s) 411, 824, 949
Mva1269I GAATGC 1 cut(s) 261
MwoI GCNNNNNNNGC 5 cut(s) 40, 826, 838, 1094, 1304
NciI CCSGG 1 cut(s) 1168
NdeII GATC 7 cut(s) 442, 697, 722, 1072, 1354, 1451, 1648
NlaIII CATG 6 cut(s) 16, 79, 439, 562, 618, 1036
NlaIV GGNNCC 6 cut(s) 141, 385, 685, 1356, 1444, 1500
NmeAIII GCCGAG 1 cut(s) 611
NspI RCATGY 2 cut(s) 79, 1036
PaeI GCATGC 1 cut(s) 79
PciI ACATGT 1 cut(s) 1032
PctI GAATGC 1 cut(s) 261
PdmI GAANNNNTTC 1 cut(s) 288
PfeI GAWTC 7 cut(s) 190, 284, 420, 565, 959, 1022, 1349
PkrI GCNGC 4 cut(s) 668, 707, 831, 1693
PleI GAGTC 7 cut(s) 115, 771, 787, 813, 937, 969, 1709
PmaCI CACGTG 1 cut(s) 1302
PmlI CACGTG 1 cut(s) 1302
PpsI GAGTC 7 cut(s) 115, 771, 787, 813, 937, 969, 1709
Ppu21I YACGTR 1 cut(s) 1302
PscI ACATGT 1 cut(s) 1032
PshAI GACNNNNGTC 1 cut(s) 944
PspCI CACGTG 1 cut(s) 1302
PspN4I GGNNCC 6 cut(s) 141, 385, 685, 1356, 1444, 1500
PspPI GGNCC 3 cut(s) 384, 1442, 1570
PsuI RGATCY 2 cut(s) 442, 1354
RsaI GTAC 2 cut(s) 17, 880
RsaNI GTAC 2 cut(s) 16, 879
RseI CAYNNNNRTG 3 cut(s) 378, 1037, 1467
SalI GTCGAC 1 cut(s) 118
SatI GCNGC 4 cut(s) 667, 706, 830, 1692
Sau3AI GATC 7 cut(s) 442, 697, 722, 1072, 1354, 1451, 1648
Sau96I GGNCC 3 cut(s) 384, 1442, 1570
SchI GAGTC 7 cut(s) 115, 771, 787, 814, 938, 969, 1710
ScrFI CCNGG 1 cut(s) 1168
SfaNI GCATC 2 cut(s) 498, 1597
SinI GGWCC 2 cut(s) 384, 1570
SmiMI CAYNNNNRTG 3 cut(s) 378, 1037, 1467
SmlI CTYRAG 5 cut(s) 658, 718, 788, 802, 1682
SmoI CTYRAG 5 cut(s) 658, 718, 788, 802, 1682
SphI GCATGC 1 cut(s) 79
SsiI CCGC 1 cut(s) 1507
SspI AATATT 2 cut(s) 297, 996
SspMI CTAG 3 cut(s) 602, 653, 1592
StyD4I CCNGG 1 cut(s) 1166
StyI CCWWGG 1 cut(s) 279
TaaI ACNGT 4 cut(s) 573, 1112, 1140, 1528
TaiI ACGT 2 cut(s) 864, 1304
TaqI TCGA 8 cut(s) 24, 62, 119, 638, 775, 932, 957, 1253
TatI WGTACW 2 cut(s) 15, 878
TfiI GAWTC 7 cut(s) 190, 284, 420, 565, 959, 1022, 1349
TscAI CASTG 4 cut(s) 430, 891, 1117, 1702
TseI GCWGC 4 cut(s) 666, 705, 829, 1691
TspGWI ACGGA 2 cut(s) 396, 905
TspRI CASTG 4 cut(s) 430, 891, 1117, 1702
Vha464I CTTAAG 2 cut(s) 718, 1682
VpaK11BI GGWCC 2 cut(s) 384, 1570
XapI RAATTY 6 cut(s) 640, 1043, 1090, 1175, 1203, 1584
XceI RCATGY 2 cut(s) 79, 1036
XcmI CCANNNNNNNNNTGG 1 cut(s) 1561
XmiI GTMKAC 2 cut(s) 119, 1619
XmnI GAANNNNTTC 1 cut(s) 288
XspI CTAG 3 cut(s) 602, 653, 1592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.