Rh7AG492500

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000129
Physical Location & Seq
Forward (+)
69292099 .. 69294753
2655 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG492500.1

Sequence Viewer

Length: 2250 bp
ATGGATGGAGCAATTCTCAATGATTTTAGCAGCCTCATCTCCTTGGAATTTTTAGATTTAAGTGGTAATTGCTTTGTGCGATTACCTGAAAGTATCTCTCAACTCTCAAAGCTCGACACTCTGCACTTGAGTAATTGCAGACAGCTTCAATTGCTGCCCAAGAAGCTTCCGTTAAGTCTTCATCACGTGTATGCACAAGATTGTACTTCACTGACAGATTACCCAAATCAAATCAAAGAATTGAATTCATCGGAGTCAGGACTGACTATTATCGATTCCCTCAATTCTTCAGCACTTGGAGTCTCACAAAGTTCGTGCGGGTTGAATTTTTCAAGCATTGTAGGGGAACCTCTACAAGCGCGTGTGACATATAATCATCCGGAGGGGATAAAAGTTTATCATGTGCCACGGATAACAGTTCTAAAACAAGAGCCTTTCTTTTCAGATTTCAGTAGCGCACATCCTACAGATGAAATTCCAGAGTGGTTCAGCGCTATATCTACCAGAAATCCCATATTAAGCCCGATACCTCAAAATCTGGTCGATGATAACAAGTGGAAGGGATTTGCCGCGGGTGCTATATTCTCAGTCAAGGGGCACACTGCTCTCTCCCTTATTGAACCGGATCCTGATTTTTCTAATTACTCGTATCAAGTCACAATCGAAACTGATGTTGTGCGCCTGGAACCACAAGTGTTCGGGATAGGACTCAGCTGCCTTGCATCAAGTTCTCATCTGCTTATAATTTTCTATATAGGGTGTCTGAAGTTTCCACGATGGGGGTTAAATCAATCAACTGTGGTGAGAGCTATATTTGAAACCACCAATCCATCCATGGTGGTCCAGAAATGTGGAATTCATCTACTCTATGAGCAAGATGCTGGATGGCATTCCAGAATCCGTAGGCATCAACCGATTGTGCTGAATAAAAAGGACGCCGGTTCTCTACGGGATTATGCCTGGCTTCGTCCATCTTTTAGATGGGAGAAATTCATTCCACCCTTGGAAGAAGAATCCACACGTGTGCTGAGAAAGAACCTGGAGTCTGTTCTTCCAAGATACCTTGAGGCACTAAACTGTTATTCTAAAACGTACAAATTTAACCTCAGTGGAAGGCCAGGGTGGTTTCATGAGTCGTTTGTCTTTCCTCGGAGGGCTGGTTTTACTGTAGCATCAATCAAGCGGCCTCAAAATCTACACAAGAGCAAGAAGTGGATGGGATTTGCAATATATGCATCACTTGTAGAGGAAGTGGGGCAGACAATGGAAAAGGACAACTATTGGGTACGCGTATTTGTTACACTAACTGGGGATAAATTTCGTATGGGTGTGGCCCGAGTACTTAAGCATGTCAGGCCATTGTCAGAAGAACATCATCAACTATTGGTTATTTACATACCACGGACACAAATTCCTGAAGTGTTGTTCACTCAGACATTAACAACTGCAATGGACTTTTACATCAAGATCAGTGATAGCGCTCATGTAAAGGTTCAAACATGTGGGTTCCGTATTGTGTACCAAGAAGATATACAAGGGTTTGCTGATACAATTATCCGGTGCATGCAAAAGGAAGATTCTCTTAAATCTCACAATAAGTTGGTGGTAGAACAATGGATACGATTGATACGATGGCAAGGTGCCCTAAATTTAGAGAGAATGACAGAACATGATTCTAGAACCCCACGGGAAAAACAATTTCAATTGCACTTACAAAAATATAGAAATTGGGACTGGTCTGACCCTCATCCTGTTTGTTGTCACTTCGAGGGAGCTGAAATTTTCAAGTTGAAATGGTTCATGCCTTTCATCAACCAAGGCAACTCTGCAGAAATCCAACTGCCTCTGAATGTGTTCAATGATGATAATTGGTTGGGCTTTGCCGTATGTTCTCAATTGTCCCACGACCAATATCCAAACATTAGTCTTGGCAGTACTGCTGCTGATTCAGAGGAGGTTATGCTTATTTGCTGTCTGGCCTCTGATGTTGCTTGGGAGGGCTTATTTGATTACAACTTTGAATTACGTTTAAAGATTCAAGAGCCATCGGAATACGATGCGACTTGGTTCTTTTATATACCGCGCACTAAAGTTCGTAGTAATGTTTGGAGACAATGCAAATTGGCCAGGATAACTATGTTGTTGTCTAGTCCAAGCTCAGGAGTAGTGCATGGTTGTGCCCTTCGTCTACTATTTAAGGAGGACGTTAAACGTCTTGTAAAAACACTAGCCCACGCCGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

749

Amino Acids

85.92

Weight (kDa)

7.58

Isoelectric Point (pI)

43.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 599 - 736 9.2e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 743
AccB1I GGYRCC 1 cut(s) 1640
AccI GTMKAC 1 cut(s) 2188
AccII CGCG 4 cut(s) 361, 572, 1290, 2083
AccIII TCCGGA 1 cut(s) 379
AciI CCGC 5 cut(s) 318, 570, 572, 1183, 2081
AclWI GGATC 2 cut(s) 620, 633
AcoI YGGCCR 1 cut(s) 2124
AcuI CTGAAG 3 cut(s) 273, 785, 1437
AcvI CACGTG 2 cut(s) 187, 1022
AcyI GRCGYC 1 cut(s) 936
AfaI GTAC 6 cut(s) 205, 1094, 1287, 1341, 1520, 1936
AfeI AGCGCT 2 cut(s) 493, 1480
AfiI CCNNNNNNNGG 2 cut(s) 779, 2159
AflII CTTAAG 1 cut(s) 1343
AflIII ACRYGT 5 cut(s) 186, 1019, 1021, 1288, 1499
AjnI CCWGG 5 cut(s) 681, 959, 1038, 1117, 2126
AleI CACNNNNGTG 1 cut(s) 1022
AluBI AGCT 7 cut(s) 112, 145, 166, 714, 809, 1775, 2157
AluI AGCT 7 cut(s) 112, 145, 166, 714, 809, 1775, 2157
Alw26I GTCTC 2 cut(s) 307, 2104
AlwI GGATC 2 cut(s) 620, 633
Ama87I CYCGRG 1 cut(s) 1335
Aor13HI TCCGGA 1 cut(s) 379
Aor51HI AGCGCT 2 cut(s) 493, 1480
AoxI GGCC 6 cut(s) 1115, 1184, 1332, 1355, 1977, 2124
ApeKI GCWGC 4 cut(s) 30, 154, 714, 1940
Asp700I GAANNNNTTC 2 cut(s) 1796, 1853
AspLEI GCGC 6 cut(s) 361, 458, 494, 681, 1481, 2085
AspS9I GGNCC 2 cut(s) 841, 1333
AsuHPI GGTGA 1 cut(s) 814
AvaI CYCGRG 1 cut(s) 1335
AvaII GGWCC 1 cut(s) 841
BaeGI GKGCMC 3 cut(s) 600, 1645, 2182
BalI TGGCCA 1 cut(s) 2126
BamHI GGATCC 1 cut(s) 625
BanI GGYRCC 1 cut(s) 1640
BbrPI CACGTG 2 cut(s) 187, 1022
BbsI GAAGAC 1 cut(s) 170
BbvI GCAGC 4 cut(s) 42, 141, 701, 1927
BccI CCATC 8 cut(s) 771, 838, 879, 975, 979, 1210, 1626, 2053
BceAI ACGGC 1 cut(s) 1868
BciT130I CCWGG 5 cut(s) 683, 961, 1040, 1119, 2128
BciVI GTATCC 1 cut(s) 1611
BcoDI GTCTC 2 cut(s) 307, 2104
BfaI CTAG 3 cut(s) 1677, 2148, 2228
BfmI CTRYAG 3 cut(s) 465, 1167, 1827
BfoI RGCGCY 2 cut(s) 495, 1482
BfrI CTTAAG 1 cut(s) 1343
BfuI GTATCC 1 cut(s) 1611
BisI GCNGC 6 cut(s) 31, 155, 570, 715, 1184, 1941
BlsI GCNGC 6 cut(s) 32, 156, 571, 716, 1185, 1942
BmcAI AGTACT 2 cut(s) 1341, 1936
Bme1390I CCNGG 5 cut(s) 683, 961, 1040, 1119, 2128
Bme18I GGWCC 1 cut(s) 841
BmeT110I CYCGRG 1 cut(s) 1335
BmgT120I GGNCC 2 cut(s) 841, 1333
BmiI GGNNCC 5 cut(s) 348, 627, 687, 1508, 1642
BmrFI CCNGG 5 cut(s) 683, 961, 1040, 1119, 2128
BmrI ACTGGG 1 cut(s) 1317
BmsI GCATC 6 cut(s) 731, 868, 916, 1181, 1244, 2047
BmuI ACTGGG 1 cut(s) 1317
BpiI GAAGAC 1 cut(s) 170
BplI GAGNNNNNCTC 1 cut(s) 32
BpmI CTGGAG 1 cut(s) 1061
Bpu10I CCTNAGC 1 cut(s) 2158
BpuEI CTTGAG 2 cut(s) 148, 1085
Bsa29I ATCGAT 1 cut(s) 273
BsaAI YACGTR 2 cut(s) 187, 1022
BsaHI GRCGYC 1 cut(s) 936
BsaWI WCCGGW 3 cut(s) 379, 622, 1557
BsaXI ACNNNNNCTCC 2 cut(s) 1144, 1174
Bsc4I CCNNNNNNNGG 2 cut(s) 779, 2159
Bse118I RCCGGY 1 cut(s) 938
Bse1I ACTGG 2 cut(s) 1312, 1739
Bse3DI GCAATG 1 cut(s) 1455
BseAI TCCGGA 1 cut(s) 379
BseBI CCWGG 5 cut(s) 683, 961, 1040, 1119, 2128
BseCI ATCGAT 1 cut(s) 273
BseGI GGATG 7 cut(s) 10, 376, 460, 830, 890, 1221, 1747
BseLI CCNNNNNNNGG 2 cut(s) 779, 2159
BseMI GCAATG 1 cut(s) 1455
BseMII CTCAG 6 cut(s) 600, 724, 1019, 1120, 1445, 2172
BseNI ACTGG 2 cut(s) 1312, 1739
BseRI GAGGAG 1 cut(s) 1967
BseSI GKGCMC 3 cut(s) 600, 1645, 2182
BseXI GCAGC 4 cut(s) 42, 141, 701, 1927
BsgI GTGCAG 1 cut(s) 107
Bsh1236I CGCG 4 cut(s) 361, 572, 1290, 2083
BshFI GGCC 6 cut(s) 1117, 1186, 1334, 1357, 1979, 2126
BshNI GGYRCC 1 cut(s) 1640
BshVI ATCGAT 1 cut(s) 273
BsiHKCI CYCGRG 1 cut(s) 1335
BsiSI CCGG 4 cut(s) 380, 623, 939, 1558
BslFI GGGAC 2 cut(s) 1745, 1885
BslI CCNNNNNNNGG 2 cut(s) 779, 2159
BsmAI GTCTC 2 cut(s) 307, 2104
BsmFI GGGAC 2 cut(s) 1745, 1885
BsmI GAATGC 1 cut(s) 889
BsnI GGCC 6 cut(s) 1117, 1186, 1334, 1357, 1979, 2126
BsoBI CYCGRG 1 cut(s) 1335
Bsp1286I GDGCHC 3 cut(s) 600, 1645, 2182
Bsp13I TCCGGA 1 cut(s) 379
Bsp143I GATC 2 cut(s) 625, 1467
Bsp19I CCATGG 1 cut(s) 834
BspACI CCGC 5 cut(s) 318, 570, 572, 1183, 2081
BspANI GGCC 6 cut(s) 1117, 1186, 1334, 1357, 1979, 2126
BspCNI CTCAG 6 cut(s) 599, 723, 1020, 1119, 1444, 2171
BspDI ATCGAT 1 cut(s) 273
BspEI TCCGGA 1 cut(s) 379
BspFNI CGCG 4 cut(s) 361, 572, 1290, 2083
BspHI TCATGA 1 cut(s) 1129
BspLI GGNNCC 5 cut(s) 348, 627, 687, 1508, 1642
BspMAI CTGCAG 1 cut(s) 1831
BspPI GGATC 2 cut(s) 620, 633
BspT107I GGYRCC 1 cut(s) 1640
BspTI CTTAAG 1 cut(s) 1343
BsrDI GCAATG 1 cut(s) 1455
BsrFI RCCGGY 1 cut(s) 938
BsrI ACTGG 2 cut(s) 1312, 1739
BssAI RCCGGY 1 cut(s) 938
BssMI GATC 2 cut(s) 625, 1467
BssNI GRCGYC 1 cut(s) 936
BssT1I CCWWGG 4 cut(s) 42, 834, 1002, 1816
Bst2UI CCWGG 5 cut(s) 683, 961, 1040, 1119, 2128
Bst4CI ACNGT 4 cut(s) 418, 799, 1079, 1168
BstACI GRCGYC 1 cut(s) 936
BstAFI CTTAAG 1 cut(s) 1343
BstAPI GCANNNNNTGC 1 cut(s) 1232
BstBAI YACGTR 2 cut(s) 187, 1022
BstC8I GCNNGC 1 cut(s) 1565
BstDEI CTNAG 6 cut(s) 586, 710, 1028, 1106, 1431, 2158
BstDSI CCRYGG 5 cut(s) 407, 570, 834, 1400, 1685
BstF5I GGATG 7 cut(s) 10, 376, 460, 830, 890, 1221, 1747
BstFNI CGCG 4 cut(s) 361, 572, 1290, 2083
BstH2I RGCGCY 2 cut(s) 495, 1482
BstHHI GCGC 6 cut(s) 361, 458, 494, 681, 1481, 2085
BstKTI GATC 2 cut(s) 628, 1470
BstMAI GTCTC 2 cut(s) 307, 2104
BstMBI GATC 2 cut(s) 625, 1467
BstMWI GCNNNNNNNGC 5 cut(s) 151, 163, 575, 1232, 1354
BstNI CCWGG 5 cut(s) 683, 961, 1040, 1119, 2128
BstNSI RCATGY 3 cut(s) 1352, 1503, 1567
BstSCI CCNGG 5 cut(s) 681, 959, 1038, 1117, 2126
BstSFI CTRYAG 3 cut(s) 465, 1167, 1827
BstSLI GKGCMC 3 cut(s) 600, 1645, 2182
BstUI CGCG 4 cut(s) 361, 572, 1290, 2083
BstV1I GCAGC 4 cut(s) 42, 141, 701, 1927
BstV2I GAAGAC 1 cut(s) 170
BstX2I RGATCY 1 cut(s) 625
BstXI CCANNNNNNTGG 1 cut(s) 851
BstYI RGATCY 1 cut(s) 625
Bsu15I ATCGAT 1 cut(s) 273
BsuI GTATCC 1 cut(s) 1611
BsuRI GGCC 6 cut(s) 1117, 1186, 1334, 1357, 1979, 2126
BsuTUI ATCGAT 1 cut(s) 273
BtgI CCRYGG 5 cut(s) 407, 570, 834, 1400, 1685
BtsCI GGATG 7 cut(s) 10, 376, 460, 830, 890, 1221, 1747
BtsI GCAGTG 1 cut(s) 600
BtsIMutI CAGTG 4 cut(s) 209, 600, 1114, 1477
Cac8I GCNNGC 1 cut(s) 1565
CciI TCATGA 1 cut(s) 1129
CfoI GCGC 6 cut(s) 361, 458, 494, 681, 1481, 2085
Cfr10I RCCGGY 1 cut(s) 938
Cfr13I GGNCC 2 cut(s) 841, 1333
Cfr42I CCGCGG 1 cut(s) 573
ClaI ATCGAT 1 cut(s) 273
CseI GACGC 1 cut(s) 944
Csp6I GTAC 6 cut(s) 204, 1093, 1286, 1340, 1519, 1935
CviQI GTAC 6 cut(s) 204, 1093, 1286, 1340, 1519, 1935
DdeI CTNAG 6 cut(s) 586, 710, 1028, 1106, 1431, 2158
DpnI GATC 2 cut(s) 627, 1469
DpnII GATC 2 cut(s) 625, 1467
DraI TTTAAA 1 cut(s) 2031
EaeI YGGCCR 1 cut(s) 2124
Eco130I CCWWGG 4 cut(s) 42, 834, 1002, 1816
Eco47I GGWCC 1 cut(s) 841
Eco47III AGCGCT 2 cut(s) 493, 1480
Eco57I CTGAAG 3 cut(s) 273, 785, 1437
Eco72I CACGTG 2 cut(s) 187, 1022
Eco88I CYCGRG 1 cut(s) 1335
EcoRI GAATTC 2 cut(s) 244, 855
EcoRII CCWGG 5 cut(s) 681, 959, 1038, 1117, 2126
EcoT14I CCWWGG 4 cut(s) 42, 834, 1002, 1816
EcoT22I ATGCAT 1 cut(s) 1237
ErhI CCWWGG 4 cut(s) 42, 834, 1002, 1816
FalI AAGNNNNNCTT 2 cut(s) 1566, 1598
FaqI GGGAC 2 cut(s) 1745, 1885
FauI CCCGC 2 cut(s) 311, 565
FblI GTMKAC 1 cut(s) 2188
Fnu4HI GCNGC 6 cut(s) 31, 155, 570, 715, 1184, 1941
FokI GGATG 7 cut(s) 17, 363, 447, 817, 897, 1228, 1734
Fsp4HI GCNGC 6 cut(s) 31, 155, 570, 715, 1184, 1941
FspBI CTAG 3 cut(s) 1677, 2148, 2228
GlaI GCGC 6 cut(s) 360, 457, 493, 680, 1480, 2084
GluI GCNGC 6 cut(s) 31, 155, 570, 715, 1184, 1941
GsuI CTGGAG 1 cut(s) 1061
HaeII RGCGCY 2 cut(s) 495, 1482
HaeIII GGCC 6 cut(s) 1117, 1186, 1334, 1357, 1979, 2126
HapII CCGG 4 cut(s) 380, 623, 939, 1558
HgaI GACGC 1 cut(s) 944
HhaI GCGC 6 cut(s) 361, 458, 494, 681, 1481, 2085
Hin1I GRCGYC 1 cut(s) 936
Hin6I GCGC 6 cut(s) 359, 456, 492, 679, 1479, 2083
HinP1I GCGC 6 cut(s) 359, 456, 492, 679, 1479, 2083
HindIII AAGCTT 1 cut(s) 164
HpaII CCGG 4 cut(s) 380, 623, 939, 1558
HphI GGTGA 1 cut(s) 814
Hpy166II GTNNAC 3 cut(s) 1428, 1519, 2189
Hpy8I GTNNAC 3 cut(s) 1428, 1519, 2189
HpyAV CCTTC 3 cut(s) 553, 1107, 2192
HpyCH4III ACNGT 4 cut(s) 418, 799, 1079, 1168
HpyCH4IV ACGT 6 cut(s) 186, 1021, 1091, 2026, 2205, 2212
HpyF10VI GCNNNNNNNGC 5 cut(s) 151, 163, 575, 1232, 1354
HpyF3I CTNAG 6 cut(s) 586, 710, 1028, 1106, 1431, 2158
HpySE526I ACGT 6 cut(s) 186, 1021, 1091, 2026, 2205, 2212
Hsp92I GRCGYC 1 cut(s) 936
HspAI GCGC 6 cut(s) 359, 456, 492, 679, 1479, 2083
Kpn2I TCCGGA 1 cut(s) 379
KspI CCGCGG 1 cut(s) 573
Kzo9I GATC 2 cut(s) 625, 1467
LmnI GCTCC 2 cut(s) 8, 1772
Lsp1109I GCAGC 4 cut(s) 42, 141, 701, 1927
LweI GCATC 6 cut(s) 731, 868, 916, 1181, 1244, 2047
MaeI CTAG 3 cut(s) 1677, 2148, 2228
MaeII ACGT 6 cut(s) 186, 1021, 1091, 2026, 2205, 2212
MaeIII GTNAC 4 cut(s) 364, 655, 1297, 1760
MalI GATC 2 cut(s) 627, 1469
MboI GATC 2 cut(s) 625, 1467
MboII GAAGA 8 cut(s) 170, 279, 1019, 1022, 1043, 1379, 1538, 1586
MfeI CAATTG 3 cut(s) 149, 1703, 1895
MflI RGATCY 1 cut(s) 625
MhlI GDGCHC 3 cut(s) 600, 1645, 2182
MlsI TGGCCA 1 cut(s) 2126
MluI ACGCGT 1 cut(s) 1288
MluNI TGGCCA 1 cut(s) 2126
MlyI GAGTC 5 cut(s) 263, 309, 702, 1052, 1142
MmeI TCCRAC 1 cut(s) 1861
Mox20I TGGCCA 1 cut(s) 2126
Mph1103I ATGCAT 1 cut(s) 1237
MroI TCCGGA 1 cut(s) 379
MroXI GAANNNNTTC 2 cut(s) 1796, 1853
MscI TGGCCA 1 cut(s) 2126
MslI CAYNNNNRTG 3 cut(s) 189, 1022, 2175
Msp20I TGGCCA 1 cut(s) 2126
MspA1I CMGCKG 2 cut(s) 572, 714
MspCI CTTAAG 1 cut(s) 1343
MspI CCGG 4 cut(s) 380, 623, 939, 1558
MspR9I CCNGG 5 cut(s) 683, 961, 1040, 1119, 2128
MunI CAATTG 3 cut(s) 149, 1703, 1895
Mva1269I GAATGC 1 cut(s) 889
MvaI CCWGG 5 cut(s) 683, 961, 1040, 1119, 2128
MvnI CGCG 4 cut(s) 361, 572, 1290, 2083
MwoI GCNNNNNNNGC 5 cut(s) 151, 163, 575, 1232, 1354
NcoI CCATGG 1 cut(s) 834
NdeII GATC 2 cut(s) 625, 1467
NlaIV GGNNCC 5 cut(s) 348, 627, 687, 1508, 1642
NmuCI GTSAC 3 cut(s) 364, 655, 1760
NsiI ATGCAT 1 cut(s) 1237
NspI RCATGY 3 cut(s) 1352, 1503, 1567
OliI CACNNNNGTG 1 cut(s) 1022
PaeI GCATGC 1 cut(s) 1567
PagI TCATGA 1 cut(s) 1129
PciI ACATGT 1 cut(s) 1499
PcsI WCGNNNNNNNCGW 1 cut(s) 1627
PctI GAATGC 1 cut(s) 889
PdmI GAANNNNTTC 2 cut(s) 1796, 1853
PfeI GAWTC 7 cut(s) 275, 897, 1013, 1577, 1673, 1946, 2035
PkrI GCNGC 6 cut(s) 32, 156, 571, 716, 1185, 1942
PleI GAGTC 5 cut(s) 262, 308, 702, 1051, 1141
PmaCI CACGTG 2 cut(s) 187, 1022
PmlI CACGTG 2 cut(s) 187, 1022
PpsI GAGTC 5 cut(s) 262, 308, 702, 1051, 1141
Ppu21I YACGTR 2 cut(s) 187, 1022
PscI ACATGT 1 cut(s) 1499
PsiI TTATAA 1 cut(s) 743
Psp6I CCWGG 5 cut(s) 681, 959, 1038, 1117, 2126
PspCI CACGTG 2 cut(s) 187, 1022
PspGI CCWGG 5 cut(s) 681, 959, 1038, 1117, 2126
PspN4I GGNNCC 5 cut(s) 348, 627, 687, 1508, 1642
PspPI GGNCC 2 cut(s) 841, 1333
PsrI GAACNNNNNNTAC 2 cut(s) 1602, 1634
PstI CTGCAG 1 cut(s) 1831
PsuI RGATCY 1 cut(s) 625
PvuII CAGCTG 1 cut(s) 714
RsaI GTAC 6 cut(s) 205, 1094, 1287, 1341, 1520, 1936
RsaNI GTAC 6 cut(s) 204, 1093, 1286, 1340, 1519, 1935
RseI CAYNNNNRTG 3 cut(s) 189, 1022, 2175
SacII CCGCGG 1 cut(s) 573
SatI GCNGC 6 cut(s) 31, 155, 570, 715, 1184, 1941
Sau3AI GATC 2 cut(s) 625, 1467
Sau96I GGNCC 2 cut(s) 841, 1333
ScaI AGTACT 2 cut(s) 1341, 1936
SchI GAGTC 5 cut(s) 263, 309, 702, 1052, 1142
ScrFI CCNGG 5 cut(s) 683, 961, 1040, 1119, 2128
SduI GDGCHC 3 cut(s) 600, 1645, 2182
SfaNI GCATC 6 cut(s) 731, 868, 916, 1181, 1244, 2047
SfcI CTRYAG 3 cut(s) 465, 1167, 1827
Sfr303I CCGCGG 1 cut(s) 573
SgrBI CCGCGG 1 cut(s) 573
SinI GGWCC 1 cut(s) 841
SmiMI CAYNNNNRTG 3 cut(s) 189, 1022, 2175
SmlI CTYRAG 3 cut(s) 127, 1064, 1343
SmoI CTYRAG 3 cut(s) 127, 1064, 1343
SphI GCATGC 1 cut(s) 1567
SsiI CCGC 5 cut(s) 318, 570, 572, 1183, 2081
SspMI CTAG 3 cut(s) 1677, 2148, 2228
StyD4I CCNGG 5 cut(s) 681, 959, 1038, 1117, 2126
StyI CCWWGG 4 cut(s) 42, 834, 1002, 1816
TaaI ACNGT 4 cut(s) 418, 799, 1079, 1168
TaiI ACGT 6 cut(s) 189, 1024, 1094, 2029, 2208, 2215
TaqI TCGA 5 cut(s) 114, 273, 543, 663, 1767
TatI WGTACW 3 cut(s) 203, 1339, 1934
TauI GCSGC 2 cut(s) 572, 1186
TfiI GAWTC 7 cut(s) 275, 897, 1013, 1577, 1673, 1946, 2035
TscAI CASTG 4 cut(s) 216, 607, 1114, 1477
TseFI GTSAC 3 cut(s) 364, 655, 1760
TseI GCWGC 4 cut(s) 30, 154, 714, 1940
Tsp45I GTSAC 3 cut(s) 364, 655, 1760
TspDTI ATGAA 8 cut(s) 170, 237, 486, 848, 982, 1118, 1789, 1798
TspGWI ACGGA 5 cut(s) 159, 424, 890, 1417, 1499
TspRI CASTG 4 cut(s) 216, 607, 1114, 1477
Vha464I CTTAAG 1 cut(s) 1343
VpaK11BI GGWCC 1 cut(s) 841
XbaI TCTAGA 1 cut(s) 1676
XceI RCATGY 3 cut(s) 1352, 1503, 1567
XcmI CCANNNNNNNNNTGG 2 cut(s) 832, 978
XmiI GTMKAC 1 cut(s) 2188
XmnI GAANNNNTTC 2 cut(s) 1796, 1853
XspI CTAG 3 cut(s) 1677, 2148, 2228
ZrmI AGTACT 2 cut(s) 1341, 1936
Zsp2I ATGCAT 1 cut(s) 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.