Rmu_sc0002517.1_g000003

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002517.1
OG0000129
Physical Location & Seq
Forward (+)
13282 .. 16644
3363 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002517.1_g000003.1.cds

Sequence Viewer

Length: 2973 bp
atgctacggcatttagatctgactggttcaccattcttgatgtcgactccagacttcactgaggttccagatcttgaagagttggtgcttcaattttgtagaaacttggtggaagttcacccatctcttggatttctgaagaaacttgtctctttgaatatgagaaattgcgagtctattgagagcattccacctttcactgcccttgaatcccttcaaatagtgtgtctttcatcctgttcaggactgaagaagtttccagaaattgaaggaaatatgaaaagcttgctggagcttcatttggatgggaccagcattgagtcattgcctccatcaattgaacgcttgactggtcttaccattttgaatctagcaggctgtaaaaaccttttgcatcttcccaataccattggctgcttgacatctttgaaaagtctccatctaactggttgctacaaaattgatgagatacctgagaatctgaatggtatgaaatgtctggagagccttgcaattgatggaacttccataagggagttatctttcattctaggcatgaagaatctaaagtatatatcctgcgaaggatgtaaatgtctagttccagaatcatgcaaagtgctggcttcgttaccgaatttgatagagctagacttaagttattgcaatctgatggatggagcaattctcaatgattttagcagcctaatctccttaagaaggttagatttaaatggtaattgctttgtgcgattacctgaaagtatctctcatctctcaaagctcgacactctggacttgagtaactgcagacagcttcaattgctgcccaaggagcttccgttaagtcttcagtacgtgtatgcacaagattgtacttcactgacggattacccaaatcaaatcaaagtattgaattcattggagtcgggagtgactgttgtcaattccctcaattcttcagcacttggagtcccacaaagttccgaaatggctaatttaagagatgagtgggaatctacagacctgtgttccacaatgtttactaatccagaaaatgtgggggactgtttccaactgcgtgtgacatgtaagcatacagaggggaaacaagttgatcatttgccagtgacaactctagcgtctataaaacaaatgcctttcgagtcagatataaggatcgtacatcctggagatgaaattccacagtggttcagcactatatctaccagaaatcccatatcaatctcgatacctcaaaatctggccgatgataacaagtggaggggatttgccgcgtgtgctatattctcagtcagggggcatactgctctctctgttattgaaccggatcctgattttcttaattactcgtatcaaatcacattggaaactgatgttttgcatctggaaccatttcgggtgttgggagtggatttaggcggctgccgcggctctgaatcaagttctcatctggttgtgattttcggtatatctagttcgaagtttccacagagggggttaaatcaatcaactgtggtgagggctatatttgaaactacccatccatccatggtggtccagaaatgtggaattcgtctactctatgagcaagatgctggatggcatatcagaatagccgggggcgacgatcacccgatttgtctgaataaagttgaggacgccgcctctgtaccgcagtctgcctgctggcttaatcaatctttggaatgggagaaattcataccacccttggaagaagaatccacacttgtgctgataaagaaccttcagtctgttcttccaagataccttgaggcactaaacagttattctaaaaccttcgaatttaacctcagaggaagcccagggtggtttcatgactctgcctttggtacgaggtcacaggtggccggaatgtcaattgggctacctcaaaatctacacaaaagcaagaagtggatgggatttgcaatatacgcatcacttgtagaggaagtgggccagacaatgaaagaggacaactatcgggtattggttacactaataagcggggataaattatttccggttgtgggcctaggacttgagcacgtttggccattgtcagaagaacctcatcaactattggttttttacataccgcggccacagattcccgaagtgttcactcagacattaacaactgcaatgatcagtgtcgatagccctcatgtaaaggttcaaagatgtgggttccatattgtgtatcaggaagatatacaagggtttgctaatacaattatccagtgcatgcagatggaaggttctcttaaattgtacaataagttgatggtagaaggatggataaagttgatacgattgcaaggtgcccatatagagggaatgaaagaacgagattccagaaccccacgggaaaaatactttgaattgcactcacgaaaatatagaaattgggactggtctgaccctcgtcctgctttttgtgtcttcgagagagttgaaatctccaagttcaaatggttcatgcctttcatcaaccaaggcaactctgcagaaacccaacttcctctgaatgtgttcaatgatgataattggttggggtttgccgtatgttctcggttgtcccacgaccaagatccaaacattagtcttggcaatactgcttctgattcagaggatattatgcttatttgccgtctggattctgacgtttcttggcagggcttatttaatttccggatgcatttaggtttaaagattcgagagccatcagaatacaatgcgacttgtttcttttatataccgcgcactaaagttcggagtcaggtttggaggcaatgcaaattggccaggataactatgtggttttctagcccatgcttagcagtgcatagttgtgcccttcatctactatttaaggaggacgttgaacatcttgtagaaacactgaccctcgccgaattaccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

990

Amino Acids

111.6

Weight (kDa)

5.54

Isoelectric Point (pI)

46.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2369
AccB7I CCANNNNNTGG 1 cut(s) 128
AccI GTMKAC 2 cut(s) 44, 1600
AccII CGCG 4 cut(s) 1298, 1452, 2146, 2809
AccIII TCCGGA 1 cut(s) 2739
AclWI GGATC 4 cut(s) 1187, 1346, 1359, 2633
AcoI YGGCCR 5 cut(s) 1266, 1911, 2099, 2147, 2850
AcsI RAATTY 6 cut(s) 637, 916, 1200, 1593, 1739, 1847
AcuI CTGAAG 5 cut(s) 158, 269, 836, 945, 1775
AcyI GRCGYC 1 cut(s) 1683
AfaI GTAC 6 cut(s) 857, 877, 1185, 1695, 1897, 2321
AfiI CCNNNNNNNGG 5 cut(s) 128, 720, 1517, 2075, 2380
AflII CTTAAG 2 cut(s) 655, 715
AflIII ACRYGT 2 cut(s) 858, 1088
AjnI CCWGG 3 cut(s) 1189, 1867, 2852
AleI CACNNNNGTG 1 cut(s) 1772
AluBI AGCT 6 cut(s) 285, 295, 649, 784, 817, 838
AluI AGCT 6 cut(s) 285, 295, 649, 784, 817, 838
Alw21I GWGCWC 1 cut(s) 2094
Alw26I GTCTC 2 cut(s) 154, 440
AlwI GGATC 4 cut(s) 1187, 1346, 1359, 2633
Aor13HI TCCGGA 1 cut(s) 2739
AoxI GGCC 7 cut(s) 1266, 1911, 2002, 2077, 2099, 2147, 2850
ApeKI GCWGC 4 cut(s) 414, 702, 826, 1446
ApoI RAATTY 6 cut(s) 637, 916, 1200, 1593, 1739, 1847
ArsI GACNNNNNNTTYG 4 cut(s) 211, 243, 1874, 1906
Asp700I GAANNNNTTC 3 cut(s) 213, 1416, 2579
AspA2I CCTAGG 1 cut(s) 2080
AspLEI GCGC 1 cut(s) 2811
AspS9I GGNCC 4 cut(s) 309, 1579, 2002, 2077
AsuC2I CCSGG 1 cut(s) 1642
AsuHPI GGTGA 4 cut(s) 21, 110, 1552, 1646
AsuII TTCGAA 2 cut(s) 1502, 1845
AvaII GGWCC 2 cut(s) 309, 1579
AvrII CCTAGG 1 cut(s) 2080
BaeGI GKGCMC 2 cut(s) 2374, 2905
BalI TGGCCA 2 cut(s) 2101, 2852
BamHI GGATCC 1 cut(s) 1351
BanI GGYRCC 1 cut(s) 2369
BbsI GAAGAC 2 cut(s) 842, 2482
Bbv12I GWGCWC 1 cut(s) 2094
BbvI GCAGC 4 cut(s) 401, 714, 813, 1433
BceAI ACGGC 3 cut(s) 23, 2594, 2682
BciT130I CCWGG 3 cut(s) 1191, 1869, 2854
BclI TGATCA 2 cut(s) 1117, 2193
BcnI CCSGG 1 cut(s) 1642
BcoDI GTCTC 2 cut(s) 154, 440
BfaI CTAG 8 cut(s) 371, 551, 599, 650, 1139, 1497, 2081, 2874
BfmI CTRYAG 3 cut(s) 808, 1020, 2553
BfrI CTTAAG 2 cut(s) 655, 715
BglII AGATCT 2 cut(s) 16, 70
BlnI CCTAGG 1 cut(s) 2080
BlpI GCTNAGC 1 cut(s) 2884
Bme1390I CCNGG 4 cut(s) 1191, 1642, 1869, 2854
Bme18I GGWCC 2 cut(s) 309, 1579
BmgT120I GGNCC 4 cut(s) 309, 1579, 2002, 2077
BmiI GGNNCC 6 cut(s) 66, 310, 1353, 1413, 2237, 2371
BmrFI CCNGG 4 cut(s) 1191, 1642, 1869, 2854
BmsI GCATC 5 cut(s) 403, 1414, 1606, 1991, 2733
BoxI GACNNNNGTC 2 cut(s) 941, 2472
BpiI GAAGAC 2 cut(s) 842, 2482
BplI GAGNNNNNCTC 2 cut(s) 672, 704
BpmI CTGGAG 4 cut(s) 33, 311, 521, 1212
Bpu1102I GCTNAGC 1 cut(s) 2884
Bpu14I TTCGAA 2 cut(s) 1502, 1845
BpuEI CTTGAG 3 cut(s) 820, 1835, 2108
BpuMI CCSGG 1 cut(s) 1642
BsaAI YACGTR 1 cut(s) 859
BsaHI GRCGYC 1 cut(s) 1683
BsaWI WCCGGW 3 cut(s) 1348, 2068, 2739
BsaXI ACNNNNNCTCC 4 cut(s) 827, 857, 924, 954
Bsc4I CCNNNNNNNGG 5 cut(s) 128, 720, 1517, 2075, 2380
Bse1I ACTGG 6 cut(s) 28, 355, 451, 1127, 2287, 2465
Bse3DI GCAATG 3 cut(s) 323, 2196, 2846
BseAI TCCGGA 1 cut(s) 2739
BseBI CCWGG 3 cut(s) 1191, 1869, 2854
BseLI CCNNNNNNNGG 5 cut(s) 128, 720, 1517, 2075, 2380
BseMI GCAATG 3 cut(s) 323, 2196, 2846
BseMII CTCAG 5 cut(s) 51, 465, 1326, 1870, 2186
BseNI ACTGG 6 cut(s) 28, 355, 451, 1127, 2287, 2465
BseSI GKGCMC 2 cut(s) 2374, 2905
BseXI GCAGC 4 cut(s) 401, 714, 813, 1433
Bsh1236I CGCG 4 cut(s) 1298, 1452, 2146, 2809
BshFI GGCC 7 cut(s) 1268, 1913, 2004, 2079, 2101, 2149, 2852
BshNI GGYRCC 1 cut(s) 2369
BsiHKAI GWGCWC 1 cut(s) 2094
BsiSI CCGG 5 cut(s) 1349, 1641, 1914, 2069, 2740
BslFI GGGAC 5 cut(s) 322, 959, 1079, 2471, 2611
BslI CCNNNNNNNGG 5 cut(s) 128, 720, 1517, 2075, 2380
BsmAI GTCTC 2 cut(s) 154, 440
BsmFI GGGAC 5 cut(s) 322, 959, 1079, 2471, 2611
BsmI GAATGC 1 cut(s) 186
BsnI GGCC 7 cut(s) 1268, 1913, 2004, 2079, 2101, 2149, 2852
Bsp119I TTCGAA 2 cut(s) 1502, 1845
Bsp1286I GDGCHC 3 cut(s) 2094, 2374, 2905
Bsp13I TCCGGA 1 cut(s) 2739
Bsp1407I TGTACA 1 cut(s) 2319
Bsp143I GATC 8 cut(s) 16, 70, 1117, 1179, 1351, 1651, 2193, 2638
Bsp1720I GCTNAGC 1 cut(s) 2884
Bsp19I CCATGG 1 cut(s) 1572
BspANI GGCC 7 cut(s) 1268, 1913, 2004, 2079, 2101, 2149, 2852
BspCNI CTCAG 5 cut(s) 52, 466, 1325, 1869, 2185
BspEI TCCGGA 1 cut(s) 2739
BspFNI CGCG 4 cut(s) 1298, 1452, 2146, 2809
BspHI TCATGA 1 cut(s) 1879
BspLI GGNNCC 6 cut(s) 66, 310, 1353, 1413, 2237, 2371
BspMAI CTGCAG 2 cut(s) 812, 2557
BspPI GGATC 4 cut(s) 1187, 1346, 1359, 2633
BspT104I TTCGAA 2 cut(s) 1502, 1845
BspT107I GGYRCC 1 cut(s) 2369
BspTI CTTAAG 2 cut(s) 655, 715
BsrDI GCAATG 3 cut(s) 323, 2196, 2846
BsrGI TGTACA 1 cut(s) 2319
BsrI ACTGG 6 cut(s) 28, 355, 451, 1127, 2287, 2465
BssMI GATC 8 cut(s) 16, 70, 1117, 1179, 1351, 1651, 2193, 2638
BssNI GRCGYC 1 cut(s) 1683
BssT1I CCWWGG 5 cut(s) 831, 1572, 1752, 2080, 2542
Bst2UI CCWGG 3 cut(s) 1191, 1869, 2854
Bst4CI ACNGT 5 cut(s) 940, 1070, 1209, 1537, 1829
Bst6I CTCTTC 1 cut(s) 72
BstACI GRCGYC 1 cut(s) 1683
BstAFI CTTAAG 2 cut(s) 655, 715
BstAUI TGTACA 1 cut(s) 2319
BstBAI YACGTR 1 cut(s) 859
BstBI TTCGAA 2 cut(s) 1502, 1845
BstC8I GCNNGC 6 cut(s) 287, 376, 624, 1708, 1712, 2294
BstDEI CTNAG 6 cut(s) 60, 474, 1312, 1856, 2172, 2884
BstDSI CCRYGG 4 cut(s) 1450, 1572, 2144, 2411
BstENI CCTNNNNNAGG 1 cut(s) 718
BstFNI CGCG 4 cut(s) 1298, 1452, 2146, 2809
BstHHI GCGC 1 cut(s) 2811
BstKTI GATC 8 cut(s) 19, 73, 1120, 1182, 1354, 1654, 2196, 2641
BstMAI GTCTC 2 cut(s) 154, 440
BstMBI GATC 8 cut(s) 16, 70, 1117, 1179, 1351, 1651, 2193, 2638
BstMWI GCNNNNNNNGC 7 cut(s) 823, 835, 1301, 1449, 1452, 1979, 2098
BstNI CCWGG 3 cut(s) 1191, 1869, 2854
BstNSI RCATGY 2 cut(s) 1092, 2296
BstPAI GACNNNNGTC 2 cut(s) 941, 2472
BstSCI CCNGG 4 cut(s) 1189, 1640, 1867, 2852
BstSFI CTRYAG 3 cut(s) 808, 1020, 2553
BstSLI GKGCMC 2 cut(s) 2374, 2905
BstUI CGCG 4 cut(s) 1298, 1452, 2146, 2809
BstV1I GCAGC 4 cut(s) 401, 714, 813, 1433
BstV2I GAAGAC 2 cut(s) 842, 2482
BstX2I RGATCY 4 cut(s) 16, 70, 1351, 2638
BstXI CCANNNNNNTGG 2 cut(s) 446, 1589
BstYI RGATCY 4 cut(s) 16, 70, 1351, 2638
BsuRI GGCC 7 cut(s) 1268, 1913, 2004, 2079, 2101, 2149, 2852
BtgI CCRYGG 4 cut(s) 1450, 1572, 2144, 2411
BtsI GCAGTG 2 cut(s) 198, 2895
BtsIMutI CAGTG 9 cut(s) 57, 198, 881, 1134, 1214, 2203, 2294, 2895, 2948
Cac8I GCNNGC 6 cut(s) 287, 376, 624, 1708, 1712, 2294
CciI TCATGA 1 cut(s) 1879
CfoI GCGC 1 cut(s) 2811
Cfr13I GGNCC 4 cut(s) 309, 1579, 2002, 2077
Cfr42I CCGCGG 2 cut(s) 1453, 2147
CseI GACGC 2 cut(s) 1131, 1691
Csp6I GTAC 6 cut(s) 856, 876, 1184, 1694, 1896, 2320
CviAII CATG 9 cut(s) 556, 612, 1089, 1573, 1880, 2213, 2293, 2527, 2880
CviQI GTAC 6 cut(s) 856, 876, 1184, 1694, 1896, 2320
DdeI CTNAG 6 cut(s) 60, 474, 1312, 1856, 2172, 2884
DpnI GATC 8 cut(s) 18, 72, 1119, 1181, 1353, 1653, 2195, 2640
DpnII GATC 8 cut(s) 16, 70, 1117, 1179, 1351, 1651, 2193, 2638
DraI TTTAAA 2 cut(s) 732, 2757
EaeI YGGCCR 5 cut(s) 1266, 1911, 2099, 2147, 2850
Eam1104I CTCTTC 1 cut(s) 72
EarI CTCTTC 1 cut(s) 72
Eco130I CCWWGG 5 cut(s) 831, 1572, 1752, 2080, 2542
Eco47I GGWCC 2 cut(s) 309, 1579
Eco57I CTGAAG 5 cut(s) 158, 269, 836, 945, 1775
EcoNI CCTNNNNNAGG 1 cut(s) 718
EcoRI GAATTC 2 cut(s) 916, 1593
EcoRII CCWGG 3 cut(s) 1189, 1867, 2852
EcoT14I CCWWGG 5 cut(s) 831, 1572, 1752, 2080, 2542
EcoT22I ATGCAT 1 cut(s) 2748
ErhI CCWWGG 5 cut(s) 831, 1572, 1752, 2080, 2542
FaeI CATG 9 cut(s) 559, 615, 1092, 1576, 1883, 2216, 2296, 2530, 2883
FalI AAGNNNNNCTT 2 cut(s) 2295, 2327
FaqI GGGAC 5 cut(s) 322, 959, 1079, 2471, 2611
FatI CATG 9 cut(s) 555, 611, 1088, 1572, 1879, 2212, 2292, 2526, 2879
FauI CCCGC 1 cut(s) 2045
FbaI TGATCA 2 cut(s) 1117, 2193
FblI GTMKAC 2 cut(s) 44, 1600
FspBI CTAG 8 cut(s) 371, 551, 599, 650, 1139, 1497, 2081, 2874
GlaI GCGC 1 cut(s) 2810
GsuI CTGGAG 4 cut(s) 33, 311, 521, 1212
HaeIII GGCC 7 cut(s) 1268, 1913, 2004, 2079, 2101, 2149, 2852
HapII CCGG 5 cut(s) 1349, 1641, 1914, 2069, 2740
HgaI GACGC 2 cut(s) 1131, 1691
HhaI GCGC 1 cut(s) 2811
Hin1I GRCGYC 1 cut(s) 1683
Hin1II CATG 9 cut(s) 559, 615, 1092, 1576, 1883, 2216, 2296, 2530, 2883
Hin6I GCGC 1 cut(s) 2809
HinP1I GCGC 1 cut(s) 2809
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HindIII AAGCTT 1 cut(s) 283
HpaII CCGG 5 cut(s) 1349, 1641, 1914, 2069, 2740
HphI GGTGA 4 cut(s) 21, 110, 1552, 1646
Hpy166II GTNNAC 6 cut(s) 29, 45, 118, 1044, 1601, 2169
Hpy8I GTNNAC 6 cut(s) 29, 45, 118, 1044, 1601, 2169
Hpy99I CGWCG 1 cut(s) 1652
HpyAV CCTTC 9 cut(s) 224, 263, 578, 714, 1799, 1852, 2297, 2333, 2915
HpyCH4III ACNGT 5 cut(s) 940, 1070, 1209, 1537, 1829
HpyCH4IV ACGT 4 cut(s) 858, 2094, 2712, 2928
HpyF10VI GCNNNNNNNGC 7 cut(s) 823, 835, 1301, 1449, 1452, 1979, 2098
HpyF3I CTNAG 6 cut(s) 60, 474, 1312, 1856, 2172, 2884
HpySE526I ACGT 4 cut(s) 858, 2094, 2712, 2928
Hsp92I GRCGYC 1 cut(s) 1683
Hsp92II CATG 9 cut(s) 559, 615, 1092, 1576, 1883, 2216, 2296, 2530, 2883
HspAI GCGC 1 cut(s) 2809
Kpn2I TCCGGA 1 cut(s) 2739
Ksp22I TGATCA 2 cut(s) 1117, 2193
KspI CCGCGG 2 cut(s) 1453, 2147
Kzo9I GATC 8 cut(s) 16, 70, 1117, 1179, 1351, 1651, 2193, 2638
LmnI GCTCC 3 cut(s) 292, 680, 835
Lsp1109I GCAGC 4 cut(s) 401, 714, 813, 1433
LweI GCATC 5 cut(s) 403, 1414, 1606, 1991, 2733
MaeI CTAG 8 cut(s) 371, 551, 599, 650, 1139, 1497, 2081, 2874
MaeII ACGT 4 cut(s) 858, 2094, 2712, 2928
MaeIII GTNAC 7 cut(s) 630, 803, 934, 1084, 1129, 1902, 2038
MalI GATC 8 cut(s) 18, 72, 1119, 1181, 1353, 1653, 2195, 2640
MboI GATC 8 cut(s) 16, 70, 1117, 1179, 1351, 1651, 2193, 2638
MfeI CAATTG 4 cut(s) 336, 513, 821, 1923
MflI RGATCY 4 cut(s) 16, 70, 1351, 2638
MhlI GDGCHC 3 cut(s) 2094, 2374, 2905
MlsI TGGCCA 2 cut(s) 2101, 2852
MluNI TGGCCA 2 cut(s) 2101, 2852
MlyI GAGTC 8 cut(s) 40, 182, 329, 935, 981, 1175, 1877, 2833
MmeI TCCRAC 1 cut(s) 1099
Mox20I TGGCCA 2 cut(s) 2101, 2852
Mph1103I ATGCAT 1 cut(s) 2748
MroI TCCGGA 1 cut(s) 2739
MroXI GAANNNNTTC 3 cut(s) 213, 1416, 2579
MscI TGGCCA 2 cut(s) 2101, 2852
MslI CAYNNNNRTG 4 cut(s) 303, 1772, 2297, 2898
Msp20I TGGCCA 2 cut(s) 2101, 2852
MspA1I CMGCKG 2 cut(s) 1452, 2146
MspCI CTTAAG 2 cut(s) 655, 715
MspI CCGG 5 cut(s) 1349, 1641, 1914, 2069, 2740
MspR9I CCNGG 4 cut(s) 1191, 1642, 1869, 2854
MunI CAATTG 4 cut(s) 336, 513, 821, 1923
Mva1269I GAATGC 1 cut(s) 186
MvaI CCWGG 3 cut(s) 1191, 1869, 2854
MvnI CGCG 4 cut(s) 1298, 1452, 2146, 2809
MwoI GCNNNNNNNGC 7 cut(s) 823, 835, 1301, 1449, 1452, 1979, 2098
NciI CCSGG 1 cut(s) 1642
NcoI CCATGG 1 cut(s) 1572
NdeII GATC 8 cut(s) 16, 70, 1117, 1179, 1351, 1651, 2193, 2638
NlaIII CATG 9 cut(s) 559, 615, 1092, 1576, 1883, 2216, 2296, 2530, 2883
NlaIV GGNNCC 6 cut(s) 66, 310, 1353, 1413, 2237, 2371
NmuCI GTSAC 4 cut(s) 934, 1084, 1129, 1902
NsiI ATGCAT 1 cut(s) 2748
NspI RCATGY 2 cut(s) 1092, 2296
NspV TTCGAA 2 cut(s) 1502, 1845
OliI CACNNNNGTG 1 cut(s) 1772
PaeI GCATGC 1 cut(s) 2296
PagI TCATGA 1 cut(s) 1879
PasI CCCWGGG 1 cut(s) 1868
PciI ACATGT 1 cut(s) 1088
PctI GAATGC 1 cut(s) 186
PdmI GAANNNNTTC 3 cut(s) 213, 1416, 2579
PflMI CCANNNNNTGG 1 cut(s) 128
PfoI TCCNGGA 1 cut(s) 1189
PleI GAGTC 8 cut(s) 40, 181, 328, 934, 980, 1174, 1877, 2832
PpsI GAGTC 8 cut(s) 40, 181, 328, 934, 980, 1174, 1877, 2832
Ppu21I YACGTR 1 cut(s) 859
PscI ACATGT 1 cut(s) 1088
PshAI GACNNNNGTC 2 cut(s) 941, 2472
Psp6I CCWGG 3 cut(s) 1189, 1867, 2852
PspGI CCWGG 3 cut(s) 1189, 1867, 2852
PspN4I GGNNCC 6 cut(s) 66, 310, 1353, 1413, 2237, 2371
PspPI GGNCC 4 cut(s) 309, 1579, 2002, 2077
PsrI GAACNNNNNNTAC 2 cut(s) 1483, 1515
PstI CTGCAG 2 cut(s) 812, 2557
PsuI RGATCY 4 cut(s) 16, 70, 1351, 2638
RsaI GTAC 6 cut(s) 857, 877, 1185, 1695, 1897, 2321
RsaNI GTAC 6 cut(s) 856, 876, 1184, 1694, 1896, 2320
RseI CAYNNNNRTG 4 cut(s) 303, 1772, 2297, 2898
SacII CCGCGG 2 cut(s) 1453, 2147
SalI GTCGAC 1 cut(s) 43
Sau3AI GATC 8 cut(s) 16, 70, 1117, 1179, 1351, 1651, 2193, 2638
Sau96I GGNCC 4 cut(s) 309, 1579, 2002, 2077
SchI GAGTC 8 cut(s) 40, 182, 329, 935, 981, 1175, 1877, 2833
ScrFI CCNGG 4 cut(s) 1191, 1642, 1869, 2854
SduI GDGCHC 3 cut(s) 2094, 2374, 2905
SfaNI GCATC 5 cut(s) 403, 1414, 1606, 1991, 2733
SfcI CTRYAG 3 cut(s) 808, 1020, 2553
Sfr303I CCGCGG 2 cut(s) 1453, 2147
SfuI TTCGAA 2 cut(s) 1502, 1845
SgrBI CCGCGG 2 cut(s) 1453, 2147
SinI GGWCC 2 cut(s) 309, 1579
SmiI ATTTAAAT 1 cut(s) 732
SmiMI CAYNNNNRTG 4 cut(s) 303, 1772, 2297, 2898
SmlI CTYRAG 5 cut(s) 655, 715, 799, 1814, 2087
SmoI CTYRAG 5 cut(s) 655, 715, 799, 1814, 2087
SphI GCATGC 1 cut(s) 2296
SspMI CTAG 8 cut(s) 371, 551, 599, 650, 1139, 1497, 2081, 2874
StyD4I CCNGG 4 cut(s) 1189, 1640, 1867, 2852
StyI CCWWGG 5 cut(s) 831, 1572, 1752, 2080, 2542
SwaI ATTTAAAT 1 cut(s) 732
TaaI ACNGT 5 cut(s) 940, 1070, 1209, 1537, 1829
TaiI ACGT 4 cut(s) 861, 2097, 2715, 2931
TaqI TCGA 9 cut(s) 44, 786, 1164, 1250, 1502, 1845, 2202, 2493, 2764
TatI WGTACW 2 cut(s) 875, 2319
TauI GCSGC 6 cut(s) 1298, 1446, 1452, 1455, 1688, 2149
TscAI CASTG 9 cut(s) 64, 205, 888, 1134, 1214, 2203, 2294, 2895, 2955
TseFI GTSAC 4 cut(s) 934, 1084, 1129, 1902
TseI GCWGC 4 cut(s) 414, 702, 826, 1446
Tsp45I GTSAC 4 cut(s) 934, 1084, 1129, 1902
TspGWI ACGGA 2 cut(s) 831, 902
TspRI CASTG 9 cut(s) 64, 205, 888, 1134, 1214, 2203, 2294, 2895, 2955
Van91I CCANNNNNTGG 1 cut(s) 128
Vha464I CTTAAG 2 cut(s) 655, 715
VpaK11BI GGWCC 2 cut(s) 309, 1579
XagI CCTNNNNNAGG 1 cut(s) 718
XapI RAATTY 6 cut(s) 637, 916, 1200, 1593, 1739, 1847
XceI RCATGY 2 cut(s) 1092, 2296
XmaJI CCTAGG 1 cut(s) 2080
XmiI GTMKAC 2 cut(s) 44, 1600
XmnI GAANNNNTTC 3 cut(s) 213, 1416, 2579
XspI CTAG 8 cut(s) 371, 551, 599, 650, 1139, 1497, 2081, 2874
Zsp2I ATGCAT 1 cut(s) 2748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.