Rh7CG507500

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000129
Physical Location & Seq
Forward (+)
68618194 .. 68621087
2894 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG507500.1

Sequence Viewer

Length: 2214 bp
ATGCCTGAGAATCTGAGTGGTATTAAATGTCTGGAGAAGCTTTTCATTGGTGGAACTTGCATAAGGGAGTTATCTTTCATTGTAGGCATGAAGCATCTGCAGTATCTATCCTGCCGAGGATGTAAATGTTTAGTTTCAGAATCATGGAAAGATTACCCAAATCAAATCGAAGTATTGACTCCATTGGATTCTGGAGTGACTACCGTCAATTCCCTCAATTCTTCAGCACTTGGAGTCTCAGAAATTTCCAGAAGCTGGGTGCTTCCAAGAAATGAAGGGGAATCTCCACAGCTGCGTTTGAGACATCGGCATACAGATGGCAAACAAGTTGATCATTATTTGCCCCTGAGAAGCCTGTCGCTTCCAATAGAAAAAGAATTGCAGATATCTTCCAGTTCAAATTTCACTTTCCAACTTCCAAGAGATGAAATTCCAGAGTGGTTCAGCACTATATCTACCAGAAATCCCATATTAATCCCCATACCTCAAAATCTGACCGATGATAACAAGTGGAAGGGATTTGCCGCGTGTGCTATATTCTCAGTCAAGGGGCATACTGCTCTGTCCCTTATTGAACCGGATCCCAATTTTCTTAATTACTCGTATCAAATCACATTGGAAACTGATGTTGTGCGCCTGGAACCATATGTGTTGGAGTGGGATGAATCCCTCCGCCGCTTTGGATCAAGTTCTCATCTGCTTATGATTTTCTATATATCTAGTTTGACATTTCCACAGTGGCGGTTAAATAAATCAACTGTGGTGAGTGCTATGTTTGAAACCACCAATCCATCCATGGTGGTCCAGAAATGTGGAATTCGTCTAGTCTATGAGCAAGATGCTAGATGGTTAGCCAGAATAGTCGGTGGGGATCAAATGATTTGGCTGAATAAAGTTGAGGACTCCTCTGTATTGGAGTCTGGCTGGCTTAGTGAATCTGAGAAATGGGAGAAATTCATTCCACCCCTGGAAGAAGAATCCACAGTTATTGTGCAGAGAAAGAACCTCGAGTCTGTTCTTCCAAGATACCTTGAGGCGCTAAACCGTTATTCTGCAACGTACAAATTTAACCTCAGAGGAAGCCCAGGGTGGTTTGGGTCGATTTGCCCTGATATGATGAGGTCAAATTTGGCCAGAGTGTCAATTGAGCTGCCTCAAAATCTACACAAGAACAAGAAGTGGATGGGATTTGCAATATACTTATCACTTGTAGAGGAAGCGGGGCAGACAATGAAAAAAGAGGACTTCTATTTGGTATTGGTTACACTAACAACTGGGGATGAATCTGCAGGTAGTACGGTGTCCCAAGAACTTATGCACGTCATGCCATTGTCAGAAGAACATCATCAACTTTTGGTTATTTACATGCCGCGGGCACAGATTCCCAAAGCGTTGTTCACTCAGACATTAACAACTGCAATGGACTTTTGCATCACTATCGTTAGCCCTCATGTAAAGGTTCAAAGAAGTGGGTTCCGTATTGTGTACCAGGAAGATATACAAGGGTTTGCTGATACAATTATCCGGTGCATGCAGAGGCAAGATTCTCTAAAATCTCACAATAAGTTGGTGGTAGAAGAATGGATACAGTTGATACGATTGCAAGGTGCCACCATAGAGAGAATGACAGAACGGGATTCCAGAACCCCACGGGAAAAACAATTTGAATTGCACTTACAAAAATATAGAAATTGGGACTGGTCTGACCCTCGTCCTGTTTATTGTCACTTTGAGGGAGCTGAAATTTTCAAGTTGAAATGGTTCATGCCTTTCATCAACCAAGGCAACTCTGCAGAAATCCAACTGCCTCTGAATGTGTTCGATGATGATAATTGGTTGGGGTTTGCCATATGTTCACAGTTGTCCCGCAACCAATATCCAAACATTAGTCATGGCAGTATTGCTCTCGATTCAGAGAATGTTTGGCTTGTTTATCGTCTGGACTCTGATGTTGCTTGGCATGGCTTATTTGATTACAGGATGCAAGCAGAGATTAATATACTCGAGCCATCAGAATACTATGCTACTAGTTTCCATTATATACCGCGCACTTCGGTTCTTAGTAAGATGTGGAGGCAATGCAAATTGGCCAGGATAACTATGTGGTTTTCTAGCCGCACATGCTCAGCTGTGCGTAGTTGTGCCCTTCGTTTACTATTTAAGGAGGACGTTGAACATCTTGTAGAAACACTGACTCTCGCAGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

737

Amino Acids

85.17

Weight (kDa)

6.11

Isoelectric Point (pI)

52.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 139 - 281 1.7e-09 C-JID domain
C-JID PF20160 587 - 725 7.7e-07 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1280
AccB1I GGYRCC 1 cut(s) 1607
AccB7I CCANNNNNTGG 1 cut(s) 255
AccII CGCG 3 cut(s) 527, 1372, 2047
AclWI GGATC 4 cut(s) 575, 588, 691, 879
AcoI YGGCCR 2 cut(s) 1131, 2088
AcsI RAATTY 8 cut(s) 243, 400, 429, 816, 953, 1064, 1126, 1743
AcuI CTGAAG 1 cut(s) 207
AfaI GTAC 3 cut(s) 1061, 1297, 1487
AfiI CCNNNNNNNGG 1 cut(s) 255
AgsI TTSAA 8 cut(s) 399, 575, 779, 1463, 1667, 1750, 1756, 2174
AhlI ACTAGT 1 cut(s) 2027
AjiI CACGTC 1 cut(s) 1321
AjnI CCWGG 5 cut(s) 636, 966, 1084, 1488, 2090
AjuI GAANNNNNNNTTGG 2 cut(s) 1379, 1411
AluBI AGCT 6 cut(s) 40, 255, 292, 1150, 1739, 2129
AluI AGCT 6 cut(s) 40, 255, 292, 1150, 1739, 2129
Alw26I GTCTC 2 cut(s) 241, 295
AlwI GGATC 4 cut(s) 575, 588, 691, 879
AlwNI CAGNNNCTG 1 cut(s) 255
Ama87I CYCGRG 2 cut(s) 1007, 2003
AoxI GGCC 2 cut(s) 1131, 2088
ApeKI GCWGC 2 cut(s) 292, 1150
ApoI RAATTY 8 cut(s) 243, 400, 429, 816, 953, 1064, 1126, 1743
AseI ATTAAT 2 cut(s) 473, 1995
Asp700I GAANNNNTTC 3 cut(s) 41, 1760, 1817
AspLEI GCGC 3 cut(s) 636, 1039, 2049
AspS9I GGNCC 1 cut(s) 802
AsuHPI GGTGA 1 cut(s) 775
AvaI CYCGRG 2 cut(s) 1007, 2003
AvaII GGWCC 1 cut(s) 802
BaeGI GKGCMC 2 cut(s) 1378, 2146
BalI TGGCCA 2 cut(s) 1133, 2090
BamHI GGATCC 1 cut(s) 580
BanI GGYRCC 1 cut(s) 1607
BarI GAAGNNNNNNTAC 2 cut(s) 1569, 1601
BbvI GCAGC 2 cut(s) 279, 1137
BccI CCATC 5 cut(s) 311, 799, 840, 1177, 2017
BcgI CGANNNNNNTGC 2 cut(s) 1420, 1454
BciT130I CCWGG 5 cut(s) 638, 968, 1086, 1490, 2092
BciVI GTATCC 1 cut(s) 1578
BclI TGATCA 1 cut(s) 331
BcoDI GTCTC 2 cut(s) 241, 295
BcuI ACTAGT 1 cut(s) 2027
BfaI CTAG 5 cut(s) 720, 824, 843, 2028, 2112
BfmI CTRYAG 3 cut(s) 98, 1287, 1791
BfoI RGCGCY 1 cut(s) 1040
BfuAI ACCTGC 1 cut(s) 1280
BfuI GTATCC 1 cut(s) 1578
BisI GCNGC 6 cut(s) 293, 525, 676, 1151, 1370, 2116
BlpI GCTNAGC 1 cut(s) 2125
BlsI GCNGC 6 cut(s) 294, 526, 677, 1152, 1371, 2117
Bme1390I CCNGG 5 cut(s) 638, 968, 1086, 1490, 2092
Bme18I GGWCC 1 cut(s) 802
BmeT110I CYCGRG 2 cut(s) 1007, 2003
BmgBI CACGTC 1 cut(s) 1321
BmgT120I GGNCC 1 cut(s) 802
BmiI GGNNCC 4 cut(s) 582, 642, 1475, 1609
BmrFI CCNGG 5 cut(s) 638, 968, 1086, 1490, 2092
BmrI ACTGGG 1 cut(s) 1284
BmsI GCATC 4 cut(s) 103, 829, 1440, 1971
BmuI ACTGGG 1 cut(s) 1284
BoxI GACNNNNGTC 2 cut(s) 203, 1710
BplI GAGNNNNNCTC 2 cut(s) 890, 922
BpmI CTGGAG 2 cut(s) 53, 213
Bpu1102I GCTNAGC 1 cut(s) 2125
BpuEI CTTGAG 1 cut(s) 1052
BsaJI CCNNGG 8 cut(s) 115, 795, 966, 1084, 1085, 1370, 1649, 1780
BsaWI WCCGGW 2 cut(s) 577, 1524
Bsc4I CCNNNNNNNGG 1 cut(s) 255
Bse1I ACTGG 3 cut(s) 393, 1279, 1703
Bse3DI GCAATG 2 cut(s) 1425, 2084
BseBI CCWGG 5 cut(s) 638, 968, 1086, 1490, 2092
BseDI CCNNGG 8 cut(s) 115, 795, 966, 1084, 1085, 1370, 1649, 1780
BseGI GGATG 6 cut(s) 125, 667, 791, 1188, 1285, 1986
BseLI CCNNNNNNNGG 1 cut(s) 255
BseMI GCAATG 2 cut(s) 1425, 2084
BseMII CTCAG 8 cut(s) 5, 252, 338, 555, 930, 1087, 1415, 2139
BseNI ACTGG 3 cut(s) 393, 1279, 1703
BseRI GAGGAG 1 cut(s) 895
BseSI GKGCMC 2 cut(s) 1378, 2146
BseXI GCAGC 2 cut(s) 279, 1137
BseYI CCCAGC 1 cut(s) 255
BsgI GTGCAG 1 cut(s) 1013
Bsh1236I CGCG 3 cut(s) 527, 1372, 2047
BshFI GGCC 2 cut(s) 1133, 2090
BshNI GGYRCC 1 cut(s) 1607
BsiHKCI CYCGRG 2 cut(s) 1007, 2003
BsiSI CCGG 2 cut(s) 578, 1525
BslFI GGGAC 4 cut(s) 550, 1288, 1709, 1849
BslI CCNNNNNNNGG 1 cut(s) 255
BsmAI GTCTC 2 cut(s) 241, 295
BsmFI GGGAC 4 cut(s) 550, 1288, 1709, 1849
BsnI GGCC 2 cut(s) 1133, 2090
BsoBI CYCGRG 2 cut(s) 1007, 2003
Bsp1286I GDGCHC 2 cut(s) 1378, 2146
Bsp143I GATC 4 cut(s) 331, 580, 683, 871
Bsp1720I GCTNAGC 1 cut(s) 2125
Bsp19I CCATGG 1 cut(s) 795
BspANI GGCC 2 cut(s) 1133, 2090
BspCNI CTCAG 8 cut(s) 6, 251, 339, 554, 931, 1086, 1414, 2138
BspFNI CGCG 3 cut(s) 527, 1372, 2047
BspLI GGNNCC 4 cut(s) 582, 642, 1475, 1609
BspMAI CTGCAG 3 cut(s) 102, 1291, 1795
BspMI ACCTGC 1 cut(s) 1280
BspPI GGATC 4 cut(s) 575, 588, 691, 879
BspT107I GGYRCC 1 cut(s) 1607
BsrDI GCAATG 2 cut(s) 1425, 2084
BsrI ACTGG 3 cut(s) 393, 1279, 1703
BssECI CCNNGG 8 cut(s) 115, 795, 966, 1084, 1085, 1370, 1649, 1780
BssMI GATC 4 cut(s) 331, 580, 683, 871
BssT1I CCWWGG 2 cut(s) 795, 1780
Bst2UI CCWGG 5 cut(s) 638, 968, 1086, 1490, 2092
Bst4CI ACNGT 8 cut(s) 205, 738, 760, 985, 1046, 1300, 1590, 1860
BstAPI GCANNNNNTGC 1 cut(s) 1324
BstC8I GCNNGC 4 cut(s) 926, 1374, 1532, 1986
BstDSI CCRYGG 3 cut(s) 795, 1370, 1649
BstF5I GGATG 6 cut(s) 125, 667, 791, 1188, 1285, 1986
BstFNI CGCG 3 cut(s) 527, 1372, 2047
BstH2I RGCGCY 1 cut(s) 1040
BstHHI GCGC 3 cut(s) 636, 1039, 2049
BstKTI GATC 4 cut(s) 334, 583, 686, 874
BstMAI GTCTC 2 cut(s) 241, 295
BstMBI GATC 4 cut(s) 331, 580, 683, 871
BstMWI GCNNNNNNNGC 3 cut(s) 530, 1324, 2121
BstNI CCWGG 5 cut(s) 638, 968, 1086, 1490, 2092
BstNSI RCATGY 3 cut(s) 1369, 1534, 2124
BstPAI GACNNNNGTC 2 cut(s) 203, 1710
BstSCI CCNGG 5 cut(s) 636, 966, 1084, 1488, 2090
BstSFI CTRYAG 3 cut(s) 98, 1287, 1791
BstSLI GKGCMC 2 cut(s) 1378, 2146
BstUI CGCG 3 cut(s) 527, 1372, 2047
BstV1I GCAGC 2 cut(s) 279, 1137
BstX2I RGATCY 1 cut(s) 580
BstXI CCANNNNNNTGG 1 cut(s) 812
BstYI RGATCY 1 cut(s) 580
BsuI GTATCC 1 cut(s) 1578
BsuRI GGCC 2 cut(s) 1133, 2090
BtgI CCRYGG 3 cut(s) 795, 1370, 1649
BtrI CACGTC 1 cut(s) 1321
BtsCI GGATG 6 cut(s) 125, 667, 791, 1188, 1285, 1986
BtsIMutI CAGTG 2 cut(s) 743, 2189
BveI ACCTGC 1 cut(s) 1280
Cac8I GCNNGC 4 cut(s) 926, 1374, 1532, 1986
CaiI CAGNNNCTG 1 cut(s) 255
CfoI GCGC 3 cut(s) 636, 1039, 2049
Cfr13I GGNCC 1 cut(s) 802
Cfr42I CCGCGG 1 cut(s) 1373
Csp6I GTAC 3 cut(s) 1060, 1296, 1486
CspCI CAANNNNNGTGG 2 cut(s) 970, 1005
CviQI GTAC 3 cut(s) 1060, 1296, 1486
DpnI GATC 4 cut(s) 333, 582, 685, 873
DpnII GATC 4 cut(s) 331, 580, 683, 871
EaeI YGGCCR 2 cut(s) 1131, 2088
EciI GGCGGA 1 cut(s) 662
Eco130I CCWWGG 2 cut(s) 795, 1780
Eco32I GATATC 1 cut(s) 387
Eco47I GGWCC 1 cut(s) 802
Eco57I CTGAAG 1 cut(s) 207
Eco88I CYCGRG 2 cut(s) 1007, 2003
EcoRI GAATTC 1 cut(s) 816
EcoRII CCWGG 5 cut(s) 636, 966, 1084, 1488, 2090
EcoRV GATATC 1 cut(s) 387
EcoT14I CCWWGG 2 cut(s) 795, 1780
ErhI CCWWGG 2 cut(s) 795, 1780
FaqI GGGAC 4 cut(s) 550, 1288, 1709, 1849
FauI CCCGC 3 cut(s) 1213, 1365, 1874
FauNDI CATATG 2 cut(s) 646, 1850
FbaI TGATCA 1 cut(s) 331
Fnu4HI GCNGC 6 cut(s) 293, 525, 676, 1151, 1370, 2116
FokI GGATG 6 cut(s) 132, 674, 778, 1195, 1292, 1993
Fsp4HI GCNGC 6 cut(s) 293, 525, 676, 1151, 1370, 2116
FspBI CTAG 5 cut(s) 720, 824, 843, 2028, 2112
GlaI GCGC 3 cut(s) 635, 1038, 2048
GluI GCNGC 6 cut(s) 293, 525, 676, 1151, 1370, 2116
GsaI CCCAGC 1 cut(s) 259
GsuI CTGGAG 2 cut(s) 53, 213
HaeII RGCGCY 1 cut(s) 1040
HaeIII GGCC 2 cut(s) 1133, 2090
HapII CCGG 2 cut(s) 578, 1525
HhaI GCGC 3 cut(s) 636, 1039, 2049
Hin6I GCGC 3 cut(s) 634, 1037, 2047
HinP1I GCGC 3 cut(s) 634, 1037, 2047
HindIII AAGCTT 1 cut(s) 38
HpaII CCGG 2 cut(s) 578, 1525
HphI GGTGA 1 cut(s) 775
Hpy166II GTNNAC 4 cut(s) 1398, 1486, 1856, 2153
Hpy188III TCNNGA 8 cut(s) 32, 192, 249, 434, 805, 1641, 1907, 1940
Hpy8I GTNNAC 4 cut(s) 1398, 1486, 1856, 2153
HpyAV CCTTC 3 cut(s) 269, 508, 2156
HpyCH4III ACNGT 8 cut(s) 205, 738, 760, 985, 1046, 1300, 1590, 1860
HpyCH4IV ACGT 3 cut(s) 1058, 1320, 2169
HpyF10VI GCNNNNNNNGC 3 cut(s) 530, 1324, 2121
HpySE526I ACGT 3 cut(s) 1058, 1320, 2169
HspAI GCGC 3 cut(s) 634, 1037, 2047
Ksp22I TGATCA 1 cut(s) 331
KspI CCGCGG 1 cut(s) 1373
Kzo9I GATC 4 cut(s) 331, 580, 683, 871
LmnI GCTCC 1 cut(s) 1736
Lsp1109I GCAGC 2 cut(s) 279, 1137
LweI GCATC 4 cut(s) 103, 829, 1440, 1971
MaeI CTAG 5 cut(s) 720, 824, 843, 2028, 2112
MaeII ACGT 3 cut(s) 1058, 1320, 2169
MaeIII GTNAC 3 cut(s) 196, 1261, 1724
MalI GATC 4 cut(s) 333, 582, 685, 873
MboI GATC 4 cut(s) 331, 580, 683, 871
MboII GAAGA 8 cut(s) 213, 381, 983, 986, 1010, 1349, 1505, 1589
MfeI CAATTG 1 cut(s) 1143
MflI RGATCY 1 cut(s) 580
MhlI GDGCHC 2 cut(s) 1378, 2146
MlsI TGGCCA 2 cut(s) 1133, 2090
MluNI TGGCCA 2 cut(s) 1133, 2090
MlyI GAGTC 7 cut(s) 172, 243, 896, 926, 1019, 1937, 2188
MmeI TCCRAC 3 cut(s) 436, 633, 1825
Mox20I TGGCCA 2 cut(s) 1133, 2090
MroXI GAANNNNTTC 3 cut(s) 41, 1760, 1817
MscI TGGCCA 2 cut(s) 1133, 2090
MseI TTAA 8 cut(s) 24, 473, 594, 746, 1068, 1409, 1995, 2160
MslI CAYNNNNRTG 1 cut(s) 315
Msp20I TGGCCA 2 cut(s) 1133, 2090
MspA1I CMGCKG 3 cut(s) 292, 1372, 2129
MspI CCGG 2 cut(s) 578, 1525
MspR9I CCNGG 5 cut(s) 638, 968, 1086, 1490, 2092
MunI CAATTG 1 cut(s) 1143
MvaI CCWGG 5 cut(s) 638, 968, 1086, 1490, 2092
MvnI CGCG 3 cut(s) 527, 1372, 2047
MwoI GCNNNNNNNGC 3 cut(s) 530, 1324, 2121
NcoI CCATGG 1 cut(s) 795
NdeI CATATG 2 cut(s) 646, 1850
NdeII GATC 4 cut(s) 331, 580, 683, 871
NlaIV GGNNCC 4 cut(s) 582, 642, 1475, 1609
NmeAIII GCCGAG 1 cut(s) 140
NmuCI GTSAC 2 cut(s) 196, 1724
NspI RCATGY 3 cut(s) 1369, 1534, 2124
PaeI GCATGC 1 cut(s) 1534
PaeR7I CTCGAG 2 cut(s) 1007, 2003
PasI CCCWGGG 1 cut(s) 1085
PdmI GAANNNNTTC 3 cut(s) 41, 1760, 1817
PflMI CCANNNNNTGG 1 cut(s) 255
PkrI GCNGC 6 cut(s) 294, 526, 677, 1152, 1371, 2117
PleI GAGTC 7 cut(s) 172, 242, 896, 925, 1018, 1937, 2188
PpsI GAGTC 7 cut(s) 172, 242, 896, 925, 1018, 1937, 2188
PshAI GACNNNNGTC 2 cut(s) 203, 1710
PshBI ATTAAT 2 cut(s) 473, 1995
Psp6I CCWGG 5 cut(s) 636, 966, 1084, 1488, 2090
PspFI CCCAGC 1 cut(s) 255
PspGI CCWGG 5 cut(s) 636, 966, 1084, 1488, 2090
PspN4I GGNNCC 4 cut(s) 582, 642, 1475, 1609
PspPI GGNCC 1 cut(s) 802
PspXI VCTCGAGB 2 cut(s) 1007, 2003
PstI CTGCAG 3 cut(s) 102, 1291, 1795
PstNI CAGNNNCTG 1 cut(s) 255
PsuI RGATCY 1 cut(s) 580
PvuII CAGCTG 2 cut(s) 292, 2129
RsaI GTAC 3 cut(s) 1061, 1297, 1487
RsaNI GTAC 3 cut(s) 1060, 1296, 1486
RseI CAYNNNNRTG 1 cut(s) 315
SacII CCGCGG 1 cut(s) 1373
SaqAI TTAA 8 cut(s) 24, 473, 594, 746, 1068, 1409, 1995, 2160
SatI GCNGC 6 cut(s) 293, 525, 676, 1151, 1370, 2116
Sau3AI GATC 4 cut(s) 331, 580, 683, 871
Sau96I GGNCC 1 cut(s) 802
SchI GAGTC 7 cut(s) 172, 243, 896, 926, 1019, 1937, 2188
ScrFI CCNGG 5 cut(s) 638, 968, 1086, 1490, 2092
SduI GDGCHC 2 cut(s) 1378, 2146
SfaNI GCATC 4 cut(s) 103, 829, 1440, 1971
SfcI CTRYAG 3 cut(s) 98, 1287, 1791
Sfr274I CTCGAG 2 cut(s) 1007, 2003
Sfr303I CCGCGG 1 cut(s) 1373
SgrBI CCGCGG 1 cut(s) 1373
SinI GGWCC 1 cut(s) 802
SlaI CTCGAG 2 cut(s) 1007, 2003
SmiMI CAYNNNNRTG 1 cut(s) 315
SmlI CTYRAG 3 cut(s) 1007, 1031, 2003
SmoI CTYRAG 3 cut(s) 1007, 1031, 2003
SpeI ACTAGT 1 cut(s) 2027
SphI GCATGC 1 cut(s) 1534
SspMI CTAG 5 cut(s) 720, 824, 843, 2028, 2112
StyD4I CCNGG 5 cut(s) 636, 966, 1084, 1488, 2090
StyI CCWWGG 2 cut(s) 795, 1780
TaaI ACNGT 8 cut(s) 205, 738, 760, 985, 1046, 1300, 1590, 1860
TaiI ACGT 3 cut(s) 1061, 1323, 2172
TaqI TCGA 6 cut(s) 168, 1008, 1100, 1821, 1908, 2004
TaqII GACCGA 1 cut(s) 512
TauI GCSGC 4 cut(s) 527, 678, 1372, 2118
Tru1I TTAA 8 cut(s) 24, 473, 594, 746, 1068, 1409, 1995, 2160
Tru9I TTAA 8 cut(s) 24, 473, 594, 746, 1068, 1409, 1995, 2160
TscAI CASTG 2 cut(s) 743, 2196
TseFI GTSAC 2 cut(s) 196, 1724
TseI GCWGC 2 cut(s) 292, 1150
Tsp45I GTSAC 2 cut(s) 196, 1724
TspGWI ACGGA 1 cut(s) 1466
TspRI CASTG 2 cut(s) 743, 2196
Van91I CCANNNNNTGG 1 cut(s) 255
VpaK11BI GGWCC 1 cut(s) 802
VspI ATTAAT 2 cut(s) 473, 1995
XapI RAATTY 8 cut(s) 243, 400, 429, 816, 953, 1064, 1126, 1743
XceI RCATGY 3 cut(s) 1369, 1534, 2124
XcmI CCANNNNNNNNNTGG 1 cut(s) 793
XhoI CTCGAG 2 cut(s) 1007, 2003
XmnI GAANNNNTTC 3 cut(s) 41, 1760, 1817
XspI CTAG 5 cut(s) 720, 824, 843, 2028, 2112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.