Rmu_sc0001070.1_g000024

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001070.1
OG0000129
Physical Location & Seq
Forward (+)
115609 .. 118042
2434 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001070.1_g000024.1.cds

Sequence Viewer

Length: 1998 bp
atgggctgctcgatccgcctcattgtcctgtctgccacttccctgctagttttcttctctgctctgtttctctttaactttctctctttatggttgtacttcttgttcttcttctccactgtttgtatttgcgggtgccttttggctttcaaactcagaccaacaacactccacagtagtccttcagtcaccaccaaagtagatattccttcttcttcttcttctcctcctccatccggtaaattgacgtacgatgtgttcctcagtttcagcggtaaaggcacccgcaaaaatttcacagaccatctttacactgctctcaaacagaaagggatatacacatttagagatgacgaagaacttgtgaggggggaatcgattggtccaaatctcttgaaagcaattgaagagtcaagatatgtaattgctgttttctcacgaagttacgccgattctgcatggtgtttggatgagatcgcaaaggtcgctaaatgcatgaatgaaatgggacaagtagtcctcccagtgttctatgatgtcgatccatatgaggtacggagacaaaaaggccaacactttgagaaagcatttcagaagcatcaaaagaggtataaaggtgatccagacaaagtgaagaggtggaaggatgctctttttcaagtaggcaatctctctggatggcatctgcaagatgggtatgaatccaaagttattcaagaaattgttgaaaagattttcactgagttaaatcaattaatcccaatatctgaggggatttgtggtatgggtggtatcggtaagacaactattgcacaagtggtttttgaaagggtacaagctcagtttgaaggttgcagctttctcgagaatgttagagaggtaattgaaaagcaaggtgccgttcatgtacaagagcaacttctttcggacttgctgaaatgtaatgtaaatgtacagaacactaaaatgggaaaaaacataatgaggcagagactacatactaaaatggttctgatcattcttgatgacgtggaccaagaagaacaattggaagcactgtgcgagcgtgaatcatttggtccagggagtagaatcatcataacttcaagagatgaacatttgctcagtgcatttgaaggagataaagtgtacaatgtgaatccattaactgatgctgaagctcttcagctctttagtatgaaagcctttaagaaagaccagctggttggagaagaagttctcaagctatccaaggaatttttgaaatatgctaatggccttccattagctattaaagttttaggttcttctgttaagggtagaagtgtagaattgtggtcaagtgcattggatagactaaaaaaaagtcctgataaaaaaattattaatgttctcaaggttagttttgatggattagaaccaagggaacataaattttttttggacatcgcatgtttccttaaaggggtgaacatagatcgtgtaagaagaatactacagggtagtgatgcccactgtccagactttgatatacaggttctcctagacaaatctatggtaactctatttggaaaaaaattgtggatgcatgatttgatacaagaattgggttgggaagttgttcgccaagaaagccatgatgaacctggaaaacgtagtagattgtggctttcaagtgagatcattgatgtacttgatcagagtaaggcaacgagtgcagttcaaagcatactcctccaaggtccaactaaagatgatgtggtttactcagttaacgagtctttctcaaatatggacagattaagattgctcaaaatttggaatgtgaagttttctggaaacatcaaatatctttctaagaagttacagtttctggactgggatgaatgtcctttagattccttcccctcagactttcaaccagattaccttgtcgaacttcacatgcattcaagccgcatcaaacaactatggagaggacaaagagtaagatcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

665

Amino Acids

75.91

Weight (kDa)

8.08

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 135, 281, 896
AciI CCGC 5 cut(s) 16, 132, 273, 286, 1957
AclWI GGATC 3 cut(s) 7, 536, 614
AcsI RAATTY 4 cut(s) 292, 1256, 1433, 1815
AcuI CTGAAG 3 cut(s) 168, 1169, 1197
AfaI GTAC 8 cut(s) 98, 251, 555, 834, 909, 954, 1151, 1692
AfiI CCNNNNNNNGG 2 cut(s) 236, 1465
AhdI GACNNNNNGTC 1 cut(s) 515
AjiI CACGTC 1 cut(s) 1030
AjnI CCWGG 2 cut(s) 1081, 1645
AloI GAACNNNNNNTCC 2 cut(s) 1221, 1253
AluBI AGCT 7 cut(s) 839, 858, 1181, 1189, 1222, 1246, 1289
AluI AGCT 7 cut(s) 839, 858, 1181, 1189, 1222, 1246, 1289
Alw26I GTCTC 2 cut(s) 553, 985
AlwI GGATC 3 cut(s) 7, 536, 614
AlwNI CAGNNNCTG 1 cut(s) 1873
Ama87I CYCGRG 1 cut(s) 863
AoxI GGCC 2 cut(s) 568, 1276
ApeKI GCWGC 2 cut(s) 6, 855
ApoI RAATTY 4 cut(s) 292, 1256, 1433, 1815
AseI ATTAAT 2 cut(s) 755, 1386
Asp700I GAANNNNTTC 3 cut(s) 1182, 1236, 1620
AspS9I GGNCC 4 cut(s) 383, 1033, 1079, 1742
AsuHPI GGTGA 3 cut(s) 181, 629, 1480
AvaI CYCGRG 1 cut(s) 863
AvaII GGWCC 4 cut(s) 383, 1033, 1079, 1742
BanI GGYRCC 3 cut(s) 135, 281, 896
BbvI GCAGC 1 cut(s) 867
BccI CCATC 5 cut(s) 241, 312, 672, 686, 1403
BceAI ACGGC 1 cut(s) 884
BcgI CGANNNNNNTGC 2 cut(s) 844, 878
BciT130I CCWGG 2 cut(s) 1083, 1647
BclI TGATCA 2 cut(s) 1014, 1696
BcoDI GTCTC 2 cut(s) 553, 985
BfaI CTAG 2 cut(s) 47, 1544
BfmI CTRYAG 1 cut(s) 1496
BisI GCNGC 3 cut(s) 7, 856, 1957
BlsI GCNGC 3 cut(s) 8, 857, 1958
Bme1390I CCNGG 2 cut(s) 1083, 1647
Bme18I GGWCC 4 cut(s) 383, 1033, 1079, 1742
BmeRI GACNNNNNGTC 1 cut(s) 515
BmeT110I CYCGRG 1 cut(s) 863
BmgBI CACGTC 1 cut(s) 1030
BmgT120I GGNCC 4 cut(s) 383, 1033, 1079, 1742
BmiI GGNNCC 3 cut(s) 137, 283, 898
BmrFI CCNGG 2 cut(s) 1083, 1647
BmrI ACTGGG 2 cut(s) 518, 1888
BmsI GCATC 7 cut(s) 607, 637, 691, 1162, 1498, 1575, 1968
BmuI ACTGGG 2 cut(s) 518, 1888
BplI GAGNNNNNCTC 2 cut(s) 1769, 1801
BpuEI CTTGAG 2 cut(s) 1226, 1379
Bsa29I ATCGAT 1 cut(s) 377
BsaBI GATNNNNATC 1 cut(s) 540
BsaJI CCNNGG 4 cut(s) 1082, 1251, 1421, 1738
BsaWI WCCGGW 1 cut(s) 236
BsaXI ACNNNNNCTCC 6 cut(s) 1131, 1161, 1221, 1251, 1524, 1554
Bsc4I CCNNNNNNNGG 2 cut(s) 236, 1465
Bse1I ACTGG 2 cut(s) 524, 1883
Bse8I GATNNNNATC 1 cut(s) 540
BseBI CCWGG 2 cut(s) 1083, 1647
BseCI ATCGAT 1 cut(s) 377
BseDI CCNNGG 4 cut(s) 1082, 1251, 1421, 1738
BseGI GGATG 6 cut(s) 233, 475, 652, 683, 1590, 1888
BseJI GATNNNNATC 1 cut(s) 540
BseLI CCNNNNNNNGG 2 cut(s) 236, 1465
BseMII CTCAG 8 cut(s) 169, 277, 732, 759, 854, 1138, 1782, 1923
BseNI ACTGG 2 cut(s) 524, 1883
BseRI GAGGAG 3 cut(s) 216, 219, 1724
BseXI GCAGC 1 cut(s) 867
BsgI GTGCAG 1 cut(s) 1737
BshFI GGCC 2 cut(s) 570, 1278
BshNI GGYRCC 3 cut(s) 135, 281, 896
BshVI ATCGAT 1 cut(s) 377
BsiHKCI CYCGRG 1 cut(s) 863
BsiSI CCGG 1 cut(s) 237
BsiWI CGTACG 1 cut(s) 249
BslFI GGGAC 1 cut(s) 522
BslI CCNNNNNNNGG 2 cut(s) 236, 1465
BsmAI GTCTC 2 cut(s) 553, 985
BsmFI GGGAC 1 cut(s) 522
BsmI GAATGC 1 cut(s) 1948
BsnI GGCC 2 cut(s) 570, 1278
BsoBI CYCGRG 1 cut(s) 863
Bsp1407I TGTACA 3 cut(s) 907, 952, 1149
Bsp143I GATC 9 cut(s) 12, 474, 541, 619, 1014, 1477, 1680, 1696, 1991
BspACI CCGC 5 cut(s) 16, 132, 273, 286, 1957
BspANI GGCC 2 cut(s) 570, 1278
BspCNI CTCAG 8 cut(s) 168, 276, 733, 760, 853, 1137, 1781, 1922
BspDI ATCGAT 1 cut(s) 377
BspLI GGNNCC 3 cut(s) 137, 283, 898
BspPI GGATC 3 cut(s) 7, 536, 614
BspQI GCTCTTC 1 cut(s) 1188
BspT107I GGYRCC 3 cut(s) 135, 281, 896
BsrGI TGTACA 3 cut(s) 907, 952, 1149
BsrI ACTGG 2 cut(s) 524, 1883
BssECI CCNNGG 4 cut(s) 1082, 1251, 1421, 1738
BssMI GATC 9 cut(s) 12, 474, 541, 619, 1014, 1477, 1680, 1696, 1991
BssT1I CCWWGG 3 cut(s) 1251, 1421, 1738
Bst2UI CCWGG 2 cut(s) 1083, 1647
Bst4CI ACNGT 5 cut(s) 121, 176, 1059, 1517, 1869
Bst6I CTCTTC 3 cut(s) 402, 629, 1188
BstAPI GCANNNNNTGC 1 cut(s) 1715
BstAUI TGTACA 3 cut(s) 907, 952, 1149
BstC8I GCNNGC 1 cut(s) 1064
BstDEI CTNAG 9 cut(s) 155, 263, 741, 768, 840, 1124, 1768, 1857, 1909
BstF5I GGATG 6 cut(s) 233, 475, 652, 683, 1590, 1888
BstKTI GATC 9 cut(s) 15, 477, 544, 622, 1017, 1480, 1683, 1699, 1994
BstMAI GTCTC 2 cut(s) 553, 985
BstMBI GATC 9 cut(s) 12, 474, 541, 619, 1014, 1477, 1680, 1696, 1991
BstMWI GCNNNNNNNGC 6 cut(s) 15, 279, 455, 485, 1632, 1715
BstNI CCWGG 2 cut(s) 1083, 1647
BstNSI RCATGY 2 cut(s) 1455, 1948
BstSCI CCNGG 2 cut(s) 1081, 1645
BstSFI CTRYAG 1 cut(s) 1496
BstV1I GCAGC 1 cut(s) 867
BstXI CCANNNNNNTGG 1 cut(s) 1226
Bsu15I ATCGAT 1 cut(s) 377
BsuRI GGCC 2 cut(s) 570, 1278
BsuTUI ATCGAT 1 cut(s) 377
BtgZI GCGATG 1 cut(s) 1432
BtrI CACGTC 1 cut(s) 1030
BtsCI GGATG 6 cut(s) 233, 475, 652, 683, 1590, 1888
BtsI GCAGTG 1 cut(s) 312
BtsIMutI CAGTG 7 cut(s) 117, 312, 531, 738, 1055, 1132, 1513
Cac8I GCNNGC 1 cut(s) 1064
CaiI CAGNNNCTG 1 cut(s) 1873
Cfr13I GGNCC 4 cut(s) 383, 1033, 1079, 1742
ClaI ATCGAT 1 cut(s) 377
Csp6I GTAC 8 cut(s) 97, 250, 554, 833, 908, 953, 1150, 1691
CviAII CATG 7 cut(s) 459, 496, 905, 1452, 1589, 1637, 1945
CviQI GTAC 8 cut(s) 97, 250, 554, 833, 908, 953, 1150, 1691
DdeI CTNAG 9 cut(s) 155, 263, 741, 768, 840, 1124, 1768, 1857, 1909
DpnI GATC 9 cut(s) 14, 476, 543, 621, 1016, 1479, 1682, 1698, 1993
DpnII GATC 9 cut(s) 12, 474, 541, 619, 1014, 1477, 1680, 1696, 1991
DriI GACNNNNNGTC 1 cut(s) 515
Eam1104I CTCTTC 3 cut(s) 402, 629, 1188
Eam1105I GACNNNNNGTC 1 cut(s) 515
EarI CTCTTC 3 cut(s) 402, 629, 1188
EciI GGCGGA 1 cut(s) 5
Eco130I CCWWGG 3 cut(s) 1251, 1421, 1738
Eco47I GGWCC 4 cut(s) 383, 1033, 1079, 1742
Eco57I CTGAAG 3 cut(s) 168, 1169, 1197
Eco88I CYCGRG 1 cut(s) 863
EcoRII CCWGG 2 cut(s) 1081, 1645
EcoT14I CCWWGG 3 cut(s) 1251, 1421, 1738
EcoT22I ATGCAT 3 cut(s) 497, 1590, 1950
ErhI CCWWGG 3 cut(s) 1251, 1421, 1738
FaeI CATG 7 cut(s) 462, 499, 908, 1455, 1592, 1640, 1948
FalI AAGNNNNNCTT 2 cut(s) 903, 935
FaqI GGGAC 1 cut(s) 522
FatI CATG 7 cut(s) 458, 495, 904, 1451, 1588, 1636, 1944
FauI CCCGC 2 cut(s) 125, 293
FauNDI CATATG 1 cut(s) 547
FbaI TGATCA 2 cut(s) 1014, 1696
Fnu4HI GCNGC 3 cut(s) 7, 856, 1957
FokI GGATG 6 cut(s) 220, 482, 659, 690, 1597, 1895
Fsp4HI GCNGC 3 cut(s) 7, 856, 1957
FspBI CTAG 2 cut(s) 47, 1544
GluI GCNGC 3 cut(s) 7, 856, 1957
HaeIII GGCC 2 cut(s) 570, 1278
HapII CCGG 1 cut(s) 237
Hin1II CATG 7 cut(s) 462, 499, 908, 1455, 1592, 1640, 1948
HincII GTYRAC 1 cut(s) 1774
HindII GTYRAC 1 cut(s) 1774
HinfI GANTC 9 cut(s) 374, 410, 452, 701, 1070, 1092, 1159, 1778, 1898
HpaI GTTAAC 1 cut(s) 1774
HpaII CCGG 1 cut(s) 237
HphI GGTGA 3 cut(s) 181, 629, 1480
Hpy166II GTNNAC 5 cut(s) 1033, 1150, 1471, 1765, 1774
Hpy188I TCNGA 7 cut(s) 158, 594, 769, 928, 1014, 1701, 1912
Hpy8I GTNNAC 5 cut(s) 1033, 1150, 1471, 1765, 1774
HpyAV CCTTC 7 cut(s) 192, 219, 637, 842, 1130, 1289, 1912
HpyCH4III ACNGT 5 cut(s) 121, 176, 1059, 1517, 1869
HpyCH4IV ACGT 3 cut(s) 248, 1029, 1654
HpyF10VI GCNNNNNNNGC 6 cut(s) 15, 279, 455, 485, 1632, 1715
HpyF3I CTNAG 9 cut(s) 155, 263, 741, 768, 840, 1124, 1768, 1857, 1909
HpySE526I ACGT 3 cut(s) 248, 1029, 1654
Hsp92II CATG 7 cut(s) 462, 499, 908, 1455, 1592, 1640, 1948
Ksp22I TGATCA 2 cut(s) 1014, 1696
KspAI GTTAAC 1 cut(s) 1774
Kzo9I GATC 9 cut(s) 12, 474, 541, 619, 1014, 1477, 1680, 1696, 1991
LguI GCTCTTC 1 cut(s) 1188
Lsp1109I GCAGC 1 cut(s) 867
LweI GCATC 7 cut(s) 607, 637, 691, 1162, 1498, 1575, 1968
MaeI CTAG 2 cut(s) 47, 1544
MaeII ACGT 3 cut(s) 248, 1029, 1654
MaeIII GTNAC 4 cut(s) 187, 443, 1558, 1863
MalI GATC 9 cut(s) 14, 476, 543, 621, 1016, 1479, 1682, 1698, 1993
MboI GATC 9 cut(s) 12, 474, 541, 619, 1014, 1477, 1680, 1696, 1991
MfeI CAATTG 2 cut(s) 402, 1046
MlyI GAGTC 2 cut(s) 419, 1787
MmeI TCCRAC 2 cut(s) 1207, 1769
Mph1103I ATGCAT 3 cut(s) 497, 1590, 1950
MroXI GAANNNNTTC 3 cut(s) 1182, 1236, 1620
MslI CAYNNNNRTG 1 cut(s) 965
MspA1I CMGCKG 2 cut(s) 273, 1222
MspI CCGG 1 cut(s) 237
MspR9I CCNGG 2 cut(s) 1083, 1647
MunI CAATTG 2 cut(s) 402, 1046
Mva1269I GAATGC 1 cut(s) 1948
MvaI CCWGG 2 cut(s) 1083, 1647
MwoI GCNNNNNNNGC 6 cut(s) 15, 279, 455, 485, 1632, 1715
NdeI CATATG 1 cut(s) 547
NdeII GATC 9 cut(s) 12, 474, 541, 619, 1014, 1477, 1680, 1696, 1991
NlaIII CATG 7 cut(s) 462, 499, 908, 1455, 1592, 1640, 1948
NlaIV GGNNCC 3 cut(s) 137, 283, 898
NmuCI GTSAC 1 cut(s) 187
NsiI ATGCAT 3 cut(s) 497, 1590, 1950
NspI RCATGY 2 cut(s) 1455, 1948
PaeR7I CTCGAG 1 cut(s) 863
PciSI GCTCTTC 1 cut(s) 1188
PctI GAATGC 1 cut(s) 1948
PdmI GAANNNNTTC 3 cut(s) 1182, 1236, 1620
PfeI GAWTC 7 cut(s) 374, 452, 701, 1070, 1092, 1159, 1898
Pfl23II CGTACG 1 cut(s) 249
PkrI GCNGC 3 cut(s) 8, 857, 1958
PleI GAGTC 2 cut(s) 418, 1786
PpsI GAGTC 2 cut(s) 418, 1786
PshBI ATTAAT 2 cut(s) 755, 1386
Psp6I CCWGG 2 cut(s) 1081, 1645
PspGI CCWGG 2 cut(s) 1081, 1645
PspLI CGTACG 1 cut(s) 249
PspN4I GGNNCC 3 cut(s) 137, 283, 898
PspPI GGNCC 4 cut(s) 383, 1033, 1079, 1742
PsrI GAACNNNNNNTAC 4 cut(s) 89, 121, 242, 274
PstNI CAGNNNCTG 1 cut(s) 1873
PvuII CAGCTG 1 cut(s) 1222
RsaI GTAC 8 cut(s) 98, 251, 555, 834, 909, 954, 1151, 1692
RsaNI GTAC 8 cut(s) 97, 250, 554, 833, 908, 953, 1150, 1691
RseI CAYNNNNRTG 1 cut(s) 965
SapI GCTCTTC 1 cut(s) 1188
SatI GCNGC 3 cut(s) 7, 856, 1957
Sau3AI GATC 9 cut(s) 12, 474, 541, 619, 1014, 1477, 1680, 1696, 1991
Sau96I GGNCC 4 cut(s) 383, 1033, 1079, 1742
SchI GAGTC 2 cut(s) 419, 1787
ScrFI CCNGG 2 cut(s) 1083, 1647
SfaNI GCATC 7 cut(s) 607, 637, 691, 1162, 1498, 1575, 1968
SfcI CTRYAG 1 cut(s) 1496
Sfr274I CTCGAG 1 cut(s) 863
SinI GGWCC 4 cut(s) 383, 1033, 1079, 1742
SlaI CTCGAG 1 cut(s) 863
SmiMI CAYNNNNRTG 1 cut(s) 965
SmlI CTYRAG 3 cut(s) 863, 1241, 1394
SmoI CTYRAG 3 cut(s) 863, 1241, 1394
SsiI CCGC 5 cut(s) 16, 132, 273, 286, 1957
SspMI CTAG 2 cut(s) 47, 1544
StyD4I CCNGG 2 cut(s) 1081, 1645
StyI CCWWGG 3 cut(s) 1251, 1421, 1738
TaaI ACNGT 5 cut(s) 121, 176, 1059, 1517, 1869
TaiI ACGT 3 cut(s) 251, 1032, 1657
TaqI TCGA 5 cut(s) 11, 377, 540, 864, 1935
TatI WGTACW 5 cut(s) 96, 907, 952, 1149, 1690
TauI GCSGC 1 cut(s) 1959
TfiI GAWTC 7 cut(s) 374, 452, 701, 1070, 1092, 1159, 1898
TscAI CASTG 7 cut(s) 124, 319, 531, 745, 1062, 1132, 1520
TseFI GTSAC 1 cut(s) 187
TseI GCWGC 2 cut(s) 6, 855
Tsp45I GTSAC 1 cut(s) 187
TspDTI ATGAA 8 cut(s) 512, 516, 714, 893, 1128, 1214, 1656, 1899
TspGWI ACGGA 1 cut(s) 571
TspRI CASTG 7 cut(s) 124, 319, 531, 745, 1062, 1132, 1520
VpaK11BI GGWCC 4 cut(s) 383, 1033, 1079, 1742
VspI ATTAAT 2 cut(s) 755, 1386
XapI RAATTY 4 cut(s) 292, 1256, 1433, 1815
XceI RCATGY 2 cut(s) 1455, 1948
XcmI CCANNNNNNNNNTGG 1 cut(s) 1643
XhoI CTCGAG 1 cut(s) 863
XmnI GAANNNNTTC 3 cut(s) 1182, 1236, 1620
XspI CTAG 2 cut(s) 47, 1544
Zsp2I ATGCAT 3 cut(s) 497, 1590, 1950
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.