Rmu_sc0002551.1_g000031

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002551.1
OG0000129
Physical Location & Seq
Forward (+)
141278 .. 148421
7144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002551.1_g000031.1.cds

Sequence Viewer

Length: 3921 bp
atgggaaaaggcataattaagcatagactatctactaagagggtgcttattgttcttgatgatgtggatcaagataaacaattggaaacactgtgtgatcgtacttggtttggtcctgggagtagaatcatcataacatccagagatgaacacttgatcagtgcatttggagcagacaaagtatacaaggtaaatgcattatctgattttgaagctttggagctctttagtttgaaagccttcaaggaaggcgagggtggagaagattttctcaagctatccaaggaatttttggaatatgctaatggccttccattagctattgaagttttgggaaagtctgttcgtggtagagatgtaaggttatggaaaagtgaattgaagagactaaaaaaaaatcctcggaaggggattattggtgttcttaaatttagttttgatggattagaagaaacagaaaagaacacgtttttggacattgcgtgtttctttaaaggagagaacaaggatcgtgtaataagaatactaaatggttctgacgatgacggtgtggatatggatgtagaagttcttatggacaaatctttggtaactctattcggaacaaaattgtggatgcatgatttgatacaagaaatgggttgggaagttgttcgtcaagaatgtcttaataatcctggaggacgtagcagattgtggcttccagatgagattatccatgtacttgatcggagtaaggctacgagtgcagttcaaagcatattcctccagggtccaacaaaagacgatgtgctgcactcaattaatgattcattctctaatatggacagattaagattgctcaaaattttgaatacgaagttttctggaaacatcaattatctttctgatgaattacagtttctgcaatggcatgaatgtcctttcgattctttcccatcagactttcaaccagataaccttgttgaacttcacatgtattcaagccgcatcaaacaactatggccgggggaaagaggatggagaatgctacggcttattgatctgagtggttcaccatacttgatgtcaactccagacttcactgatgttcctgatcttgaaacgttggcgcttcaaaattgcacaagcttggtggagattcacccatctcttggatttctgaagaaacttgtctccttgaatatgagaaattgcaggtctattaagagcattccacctttcattacctccgaatcccttcaaatattgaggctttcactctgttcaggactgaagaagtttccggaaattgaaggaaatatcaaaagcttgctggagcttcatttggatgggaccaacattgaggaattgcctccatcaattgaaagcttgactggtcttaccatgttgaatctaacagacggtaaaaaccttttgcatcttcccaataacattgggtgcttgacatctttgaaaagtctctatctaacaggttgctccaaaattgatgacatacctgagaatctgaatggtatgaaatgtctggagaagcttgcaattggtggaacttccataagggagttatctttcattctaggcatgaagaatctacagtatctatcctgccaaggatgtaaatttctagttccagaatcatgcaaaggtctggcttcgttattgaatttgatacagctagacttaagttattgcaatctgatggatggagcaattctcaattattttagcagcctaatctccttaacattgttagatttaagtggtaattgctttgtgcgattacctgaaagtatctctcaactctcaaagctcgagactctgcgcttgagtaattgcagacagcttcaattgctgcccaagaagcttccgttaagtcttcaatacctgtatgcagaacaatgtacttcactgacagattacccaaatcaaatcaaagtattgaattcatcggagtcgggagtgactattgtcaattccctcaattcttcagcacctggagacttacaaagttccacaatgtttacttttccaagaactgagggggaatctttccaactgcatttgacatataagcatacagagggaaaacaaatgcctttcgggtcaaatttcagtagcatatatcctacagatgaaattccagagtggttcagcactatatctaccagaaatcccatatcaatctcgatacctcaaaatctggcagatgatgacaagtggaagggatttgccgcgtgtgccatattctcagtcagggggcatactgatctctcccttattgaaccggatcctaattttcttaattactcgtatcaaatcacatttgaaactgatgttatgcgtctggaaccatatgtgttggagaggtatgaagcacgccgcccccttggatcaagttctcatctgcttatgattttctatatatctcgtttagaggttccacagagggggtttaatcaatcaactgtggtgagggctatgtttgaaaccaccaatgcatccatggtggtccagaaatgtggaattcgtctagtctatgagcaagatgctggatggcattacagaatagtcgggggcgatgatccgatttgtctgaataaagttgaggacgacacctctgtattggagtctggctggcttagtcaatatatggaatgggagaaattcattccacccttggaagaagaatccacacttgtgctgagaaagaaccttcagtctgttcttccaagataccttgaggcactaaatcgttattctgcaacgtacaaatttaacctcaaaggaagcccagggtggtttcataagtcatttgtctctaatacgaggttagattgggccaaaatgtcaatcgagttgcctcaaaatctacaaaagagcaagaagtggatgggatttgcaatatacgcatcacttgtacaggaagtggggcagataatgaaacagaacaactatcgggtatatgttacactaaaaacgagggataagttacctacatgggtggttcgagaacttacccttaagcacatcaggccattgtcagaagaacatcatcaactattggttatttacataccacgggcacagattcctgaagtgttgttcactcagacattaacaactgtaatggacttttacatcaagatctgtgatagccctcaagtaaaggctcaaagatgtgggttccgcattgtgtaccaagaagatatacaagggtttgctgagactattatccggtgcatgcagagggaagattctcttaaatctcacgataagttggtggtagaacaatggatacagttgatacgattgcaaggtgcccatatagagggaacgaaagaacgggattccaaaaccccacgggaaaaatacttcgaattgcgttcacgaaaatatagaaattgggactggtctgaccctcgtcctgtttcttgtcacttcgagggagctgaaattgtcaagtcgaaatggttcgtgcctttcatcaaccaaggcaactccgcagaaatccaactgcctctgaatgtgttcgatgatgataattggttggggtttgccgtatgttctcgcttgtcccacgaccaatttacaaacattagtcctggcagtactgctcctgatccagaggatgctatacatacttaccgtctggactctgatgttgattggcacggcttatttgatttcaccatgcgtgcagatattaagaaacataagccattggaatacgatgcaactctgttcctttatataccgcgcactaaagttcttagtaagatgtggagacaatgcaagttggccaggataactatgtggttctctagcccatgcttagcggtgcatagttgtgcccttcgtctgctatttaaggaggacgttgaacatcttgtagaaacactgaccctcgccgaattaccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

1306

Amino Acids

149.51

Weight (kDa)

6.12

Isoelectric Point (pI)

43.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1188
AccB1I GGYRCC 1 cut(s) 3317
AccB7I CCANNNNNTGG 1 cut(s) 1154
AccI GTMKAC 1 cut(s) 183
AccII CGCG 2 cut(s) 2234, 3757
AccIII TCCGGA 1 cut(s) 1285
AciI CCGC 7 cut(s) 988, 2232, 2380, 3187, 3501, 3755, 3836
AclI AACGTT 1 cut(s) 1106
AclWI GGATC 7 cut(s) 75, 516, 2282, 2295, 2398, 2576, 3614
AcoI YGGCCR 2 cut(s) 1004, 3798
AcuI CTGAAG 5 cut(s) 1184, 1295, 1971, 2699, 3114
AdeI CACNNNGTG 1 cut(s) 95
AfaI GTAC 7 cut(s) 103, 723, 1903, 2768, 2919, 3197, 3610
AfiI CCNNNNNNNGG 4 cut(s) 407, 1154, 2447, 3328
AflII CTTAAG 2 cut(s) 1681, 3020
AflIII ACRYGT 2 cut(s) 465, 975
AjnI CCWGG 7 cut(s) 115, 676, 768, 1993, 2791, 3601, 3800
AjuI GAANNNNNNNTTGG 2 cut(s) 455, 487
AleI CACNNNNGTG 1 cut(s) 2696
AloI GAACNNNNNNTCC 2 cut(s) 327, 359
Alw21I GWGCWC 1 cut(s) 225
Alw26I GTCTC 8 cut(s) 379, 1180, 1466, 1808, 1992, 2821, 3218, 3778
AlwI GGATC 7 cut(s) 75, 516, 2282, 2295, 2398, 2576, 3614
AlwNI CAGNNNCTG 2 cut(s) 904, 1994
Ama87I CYCGRG 1 cut(s) 1811
Aor13HI TCCGGA 1 cut(s) 1285
AoxI GGCC 5 cut(s) 307, 1004, 2838, 3032, 3798
ApeKI GCWGC 3 cut(s) 793, 1728, 1852
AseI ATTAAT 1 cut(s) 804
Asp700I GAANNNNTTC 6 cut(s) 239, 267, 651, 1239, 3470, 3527
AspLEI GCGC 3 cut(s) 1114, 1824, 3759
AspS9I GGNCC 5 cut(s) 113, 773, 1335, 2509, 2838
AsuC2I CCSGG 1 cut(s) 1008
AsuHPI GGTGA 4 cut(s) 1047, 1136, 2482, 3679
AsuII TTCGAA 1 cut(s) 3375
AvaI CYCGRG 1 cut(s) 1811
AvaII GGWCC 4 cut(s) 113, 773, 1335, 2509
BaeGI GKGCMC 3 cut(s) 3085, 3322, 3853
BalI TGGCCA 1 cut(s) 3800
BamHI GGATCC 1 cut(s) 2287
BanI GGYRCC 1 cut(s) 3317
BanII GRGCYC 1 cut(s) 225
BbsI GAAGAC 1 cut(s) 1868
Bbv12I GWGCWC 1 cut(s) 225
BbvI GCAGC 3 cut(s) 780, 1740, 1839
BceAI ACGGC 3 cut(s) 1049, 3542, 3688
BciT130I CCWGG 7 cut(s) 117, 678, 770, 1995, 2793, 3603, 3802
BciVI GTATCC 1 cut(s) 3288
BclI TGATCA 1 cut(s) 156
BcnI CCSGG 1 cut(s) 1008
BcoDI GTCTC 8 cut(s) 379, 1180, 1466, 1808, 1992, 2821, 3218, 3778
BfaI CTAG 5 cut(s) 1577, 1625, 1676, 2531, 3822
BfmI CTRYAG 2 cut(s) 1592, 2127
BfoI RGCGCY 1 cut(s) 1115
BfrI CTTAAG 2 cut(s) 1681, 3020
BfuAI ACCTGC 1 cut(s) 1188
BfuI GTATCC 1 cut(s) 3288
BglII AGATCT 1 cut(s) 3144
BisI GCNGC 6 cut(s) 794, 988, 1729, 1853, 2232, 2380
BlpI GCTNAGC 1 cut(s) 3832
BlsI GCNGC 6 cut(s) 795, 989, 1730, 1854, 2233, 2381
BmcAI AGTACT 1 cut(s) 3610
Bme1390I CCNGG 8 cut(s) 117, 678, 770, 1008, 1995, 2793, 3603, 3802
Bme18I GGWCC 4 cut(s) 113, 773, 1335, 2509
BmeT110I CYCGRG 1 cut(s) 1811
BmgT120I GGNCC 5 cut(s) 113, 773, 1335, 2509, 2838
BmiI GGNNCC 7 cut(s) 774, 1336, 2289, 2349, 2439, 3185, 3319
BmrFI CCNGG 8 cut(s) 117, 678, 770, 1008, 1995, 2793, 3603, 3802
BmsI GCATC 8 cut(s) 606, 999, 1429, 2507, 2536, 2918, 3619, 3721
BoxI GACNNNNGTC 2 cut(s) 1967, 3420
BpiI GAAGAC 1 cut(s) 1868
BplI GAGNNNNNCTC 2 cut(s) 1698, 1730
BpmI CTGGAG 6 cut(s) 699, 752, 1059, 1337, 1547, 2016
Bpu1102I GCTNAGC 1 cut(s) 3832
Bpu14I TTCGAA 1 cut(s) 3375
BpuEI CTTGAG 4 cut(s) 257, 1846, 2759, 3144
BpuMI CCSGG 1 cut(s) 1008
BsaBI GATNNNNATC 1 cut(s) 66
BsaWI WCCGGW 3 cut(s) 1285, 2284, 3234
Bsc4I CCNNNNNNNGG 4 cut(s) 407, 1154, 2447, 3328
Bse1I ACTGG 2 cut(s) 1381, 3413
Bse3DI GCAATG 2 cut(s) 477, 914
Bse8I GATNNNNATC 1 cut(s) 66
BseAI TCCGGA 1 cut(s) 1285
BseBI CCWGG 7 cut(s) 117, 678, 770, 1995, 2793, 3603, 3802
BseJI GATNNNNATC 1 cut(s) 66
BseLI CCNNNNNNNGG 4 cut(s) 407, 1154, 2447, 3328
BseMI GCAATG 2 cut(s) 477, 914
BseMII CTCAG 7 cut(s) 1037, 1491, 2028, 2262, 2693, 3122, 3213
BseNI ACTGG 2 cut(s) 1381, 3413
BseSI GKGCMC 3 cut(s) 3085, 3322, 3853
BseXI GCAGC 3 cut(s) 780, 1740, 1839
BsgI GTGCAG 3 cut(s) 768, 779, 3717
Bsh1236I CGCG 2 cut(s) 2234, 3757
BshFI GGCC 5 cut(s) 309, 1006, 2840, 3034, 3800
BshNI GGYRCC 1 cut(s) 3317
BsiHKAI GWGCWC 1 cut(s) 225
BsiHKCI CYCGRG 1 cut(s) 1811
BsiSI CCGG 4 cut(s) 1007, 1286, 2285, 3235
BslFI GGGAC 3 cut(s) 1348, 3419, 3559
BslI CCNNNNNNNGG 4 cut(s) 407, 1154, 2447, 3328
BsmAI GTCTC 8 cut(s) 379, 1180, 1466, 1808, 1992, 2821, 3218, 3778
BsmFI GGGAC 3 cut(s) 1348, 3419, 3559
BsmI GAATGC 2 cut(s) 1032, 1212
BsnI GGCC 5 cut(s) 309, 1006, 2840, 3034, 3800
BsoBI CYCGRG 1 cut(s) 1811
Bsp119I TTCGAA 1 cut(s) 3375
Bsp1286I GDGCHC 4 cut(s) 225, 3085, 3322, 3853
Bsp13I TCCGGA 1 cut(s) 1285
Bsp1407I TGTACA 1 cut(s) 2917
Bsp1720I GCTNAGC 1 cut(s) 3832
Bsp19I CCATGG 1 cut(s) 2502
BspACI CCGC 7 cut(s) 988, 2232, 2380, 3187, 3501, 3755, 3836
BspANI GGCC 5 cut(s) 309, 1006, 2840, 3034, 3800
BspCNI CTCAG 7 cut(s) 1038, 1492, 2029, 2261, 2694, 3121, 3214
BspEI TCCGGA 1 cut(s) 1285
BspFNI CGCG 2 cut(s) 2234, 3757
BspLI GGNNCC 7 cut(s) 774, 1336, 2289, 2349, 2439, 3185, 3319
BspMI ACCTGC 1 cut(s) 1188
BspPI GGATC 7 cut(s) 75, 516, 2282, 2295, 2398, 2576, 3614
BspT104I TTCGAA 1 cut(s) 3375
BspT107I GGYRCC 1 cut(s) 3317
BspTI CTTAAG 2 cut(s) 1681, 3020
BsrDI GCAATG 2 cut(s) 477, 914
BsrGI TGTACA 1 cut(s) 2917
BsrI ACTGG 2 cut(s) 1381, 3413
BssNAI GTATAC 1 cut(s) 184
BssT1I CCWWGG 6 cut(s) 282, 1609, 2386, 2502, 2676, 3490
Bst1107I GTATAC 1 cut(s) 184
Bst2UI CCWGG 7 cut(s) 117, 678, 770, 1995, 2793, 3603, 3802
Bst4CI ACNGT 9 cut(s) 93, 548, 900, 1406, 1596, 2467, 3124, 3300, 3647
Bst6I CTCTTC 1 cut(s) 377
BstAFI CTTAAG 2 cut(s) 1681, 3020
BstAUI TGTACA 1 cut(s) 2917
BstBI TTCGAA 1 cut(s) 3375
BstC8I GCNNGC 6 cut(s) 1313, 1536, 2377, 2636, 3242, 3696
BstDSI CCRYGG 3 cut(s) 2502, 3077, 3359
BstFNI CGCG 2 cut(s) 2234, 3757
BstH2I RGCGCY 1 cut(s) 1115
BstHHI GCGC 3 cut(s) 1114, 1824, 3759
BstMAI GTCTC 8 cut(s) 379, 1180, 1466, 1808, 1992, 2821, 3218, 3778
BstMWI GCNNNNNNNGC 7 cut(s) 170, 746, 1849, 1861, 2237, 2906, 3031
BstNI CCWGG 7 cut(s) 117, 678, 770, 1995, 2793, 3603, 3802
BstNSI RCATGY 2 cut(s) 979, 3244
BstPAI GACNNNNGTC 2 cut(s) 1967, 3420
BstSCI CCNGG 8 cut(s) 115, 676, 768, 1006, 1993, 2791, 3601, 3800
BstSFI CTRYAG 2 cut(s) 1592, 2127
BstSLI GKGCMC 3 cut(s) 3085, 3322, 3853
BstUI CGCG 2 cut(s) 2234, 3757
BstV1I GCAGC 3 cut(s) 780, 1740, 1839
BstV2I GAAGAC 1 cut(s) 1868
BstX2I RGATCY 2 cut(s) 2287, 3144
BstXI CCANNNNNNTGG 1 cut(s) 2519
BstYI RGATCY 2 cut(s) 2287, 3144
BstZ17I GTATAC 1 cut(s) 184
BsuI GTATCC 1 cut(s) 3288
BsuRI GGCC 5 cut(s) 309, 1006, 2840, 3034, 3800
BtgI CCRYGG 3 cut(s) 2502, 3077, 3359
BtgZI GCGATG 1 cut(s) 2592
BtsIMutI CAGTG 5 cut(s) 89, 166, 1083, 1907, 3896
BveI ACCTGC 1 cut(s) 1188
Cac8I GCNNGC 6 cut(s) 1313, 1536, 2377, 2636, 3242, 3696
CaiI CAGNNNCTG 2 cut(s) 904, 1994
CfoI GCGC 3 cut(s) 1114, 1824, 3759
Cfr13I GGNCC 5 cut(s) 113, 773, 1335, 2509, 2838
CseI GACGC 1 cut(s) 2330
Csp6I GTAC 7 cut(s) 102, 722, 1902, 2767, 2918, 3196, 3609
CspCI CAANNNNNGTGG 2 cut(s) 1116, 1151
CviQI GTAC 7 cut(s) 102, 722, 1902, 2767, 2918, 3196, 3609
DraI TTTAAA 1 cut(s) 493
DraIII CACNNNGTG 1 cut(s) 95
EaeI YGGCCR 2 cut(s) 1004, 3798
Eam1104I CTCTTC 1 cut(s) 377
EarI CTCTTC 1 cut(s) 377
Ecl136II GAGCTC 1 cut(s) 223
Eco130I CCWWGG 6 cut(s) 282, 1609, 2386, 2502, 2676, 3490
Eco24I GRGCYC 1 cut(s) 225
Eco47I GGWCC 4 cut(s) 113, 773, 1335, 2509
Eco53kI GAGCTC 1 cut(s) 223
Eco57I CTGAAG 5 cut(s) 1184, 1295, 1971, 2699, 3114
Eco88I CYCGRG 1 cut(s) 1811
EcoICRI GAGCTC 1 cut(s) 223
EcoRI GAATTC 2 cut(s) 1942, 2523
EcoRII CCWGG 7 cut(s) 115, 676, 768, 1993, 2791, 3601, 3800
EcoT14I CCWWGG 6 cut(s) 282, 1609, 2386, 2502, 2676, 3490
EcoT22I ATGCAT 3 cut(s) 199, 621, 2500
EcoT38I GRGCYC 1 cut(s) 225
ErhI CCWWGG 6 cut(s) 282, 1609, 2386, 2502, 2676, 3490
FalI AAGNNNNNCTT 4 cut(s) 651, 683, 3243, 3275
FaqI GGGAC 3 cut(s) 1348, 3419, 3559
FauNDI CATATG 1 cut(s) 2353
FbaI TGATCA 1 cut(s) 156
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 6 cut(s) 794, 988, 1729, 1853, 2232, 2380
FriOI GRGCYC 1 cut(s) 225
Fsp4HI GCNGC 6 cut(s) 794, 988, 1729, 1853, 2232, 2380
FspBI CTAG 5 cut(s) 1577, 1625, 1676, 2531, 3822
GlaI GCGC 3 cut(s) 1113, 1823, 3758
GluI GCNGC 6 cut(s) 794, 988, 1729, 1853, 2232, 2380
GsuI CTGGAG 6 cut(s) 699, 752, 1059, 1337, 1547, 2016
HaeII RGCGCY 1 cut(s) 1115
HaeIII GGCC 5 cut(s) 309, 1006, 2840, 3034, 3800
HapII CCGG 4 cut(s) 1007, 1286, 2285, 3235
HgaI GACGC 1 cut(s) 2330
HhaI GCGC 3 cut(s) 1114, 1824, 3759
Hin6I GCGC 3 cut(s) 1112, 1822, 3757
HinP1I GCGC 3 cut(s) 1112, 1822, 3757
HincII GTYRAC 1 cut(s) 1071
HindII GTYRAC 1 cut(s) 1071
HindIII AAGCTT 6 cut(s) 213, 1129, 1309, 1369, 1532, 1862
HpaII CCGG 4 cut(s) 1007, 1286, 2285, 3235
HphI GGTGA 4 cut(s) 1047, 1136, 2482, 3679
Hpy166II GTNNAC 7 cut(s) 184, 1055, 1071, 2022, 3105, 3196, 3386
Hpy8I GTNNAC 7 cut(s) 184, 1055, 1071, 2022, 3105, 3196, 3386
HpyAV CCTTC 9 cut(s) 242, 250, 320, 400, 1250, 1289, 2215, 2723, 3863
HpyCH4III ACNGT 9 cut(s) 93, 548, 900, 1406, 1596, 2467, 3124, 3300, 3647
HpyCH4IV ACGT 5 cut(s) 467, 685, 1106, 2765, 3876
HpyF10VI GCNNNNNNNGC 7 cut(s) 170, 746, 1849, 1861, 2237, 2906, 3031
HpySE526I ACGT 5 cut(s) 467, 685, 1106, 2765, 3876
HspAI GCGC 3 cut(s) 1112, 1822, 3757
Kpn2I TCCGGA 1 cut(s) 1285
Ksp22I TGATCA 1 cut(s) 156
LmnI GCTCC 7 cut(s) 170, 220, 1318, 1484, 1706, 3446, 3619
Lsp1109I GCAGC 3 cut(s) 780, 1740, 1839
LweI GCATC 8 cut(s) 606, 999, 1429, 2507, 2536, 2918, 3619, 3721
MaeI CTAG 5 cut(s) 1577, 1625, 1676, 2531, 3822
MaeII ACGT 5 cut(s) 467, 685, 1106, 2765, 3876
MaeIII GTNAC 5 cut(s) 589, 1960, 2965, 2988, 3434
MfeI CAATTG 4 cut(s) 80, 1362, 1539, 1847
MflI RGATCY 2 cut(s) 2287, 3144
MhlI GDGCHC 4 cut(s) 225, 3085, 3322, 3853
MlsI TGGCCA 1 cut(s) 3800
MluNI TGGCCA 1 cut(s) 3800
MlyI GAGTC 4 cut(s) 1810, 1961, 2636, 3647
MmeI TCCRAC 4 cut(s) 800, 2077, 2340, 3535
Mox20I TGGCCA 1 cut(s) 3800
Mph1103I ATGCAT 3 cut(s) 199, 621, 2500
MroI TCCGGA 1 cut(s) 1285
MroXI GAANNNNTTC 6 cut(s) 239, 267, 651, 1239, 3470, 3527
MscI TGGCCA 1 cut(s) 3800
MslI CAYNNNNRTG 3 cut(s) 1329, 2696, 3846
Msp20I TGGCCA 1 cut(s) 3800
MspCI CTTAAG 2 cut(s) 1681, 3020
MspI CCGG 4 cut(s) 1007, 1286, 2285, 3235
MspR9I CCNGG 8 cut(s) 117, 678, 770, 1008, 1995, 2793, 3603, 3802
MunI CAATTG 4 cut(s) 80, 1362, 1539, 1847
Mva1269I GAATGC 2 cut(s) 1032, 1212
MvaI CCWGG 7 cut(s) 117, 678, 770, 1995, 2793, 3603, 3802
MvnI CGCG 2 cut(s) 2234, 3757
MwoI GCNNNNNNNGC 7 cut(s) 170, 746, 1849, 1861, 2237, 2906, 3031
NciI CCSGG 1 cut(s) 1008
NcoI CCATGG 1 cut(s) 2502
NdeI CATATG 1 cut(s) 2353
NlaIV GGNNCC 7 cut(s) 774, 1336, 2289, 2349, 2439, 3185, 3319
NmuCI GTSAC 2 cut(s) 1960, 3434
NsiI ATGCAT 3 cut(s) 199, 621, 2500
NspI RCATGY 2 cut(s) 979, 3244
NspV TTCGAA 1 cut(s) 3375
OliI CACNNNNGTG 1 cut(s) 2696
PaeI GCATGC 1 cut(s) 3244
PaeR7I CTCGAG 1 cut(s) 1811
PasI CCCWGGG 1 cut(s) 2792
PciI ACATGT 1 cut(s) 975
PctI GAATGC 2 cut(s) 1032, 1212
PdmI GAANNNNTTC 6 cut(s) 239, 267, 651, 1239, 3470, 3527
PflMI CCANNNNNTGG 1 cut(s) 1154
PfoI TCCNGGA 1 cut(s) 676
PkrI GCNGC 6 cut(s) 795, 989, 1730, 1854, 2233, 2381
PleI GAGTC 4 cut(s) 1810, 1960, 2635, 3647
PpsI GAGTC 4 cut(s) 1810, 1960, 2635, 3647
PscI ACATGT 1 cut(s) 975
PshAI GACNNNNGTC 2 cut(s) 1967, 3420
PshBI ATTAAT 1 cut(s) 804
Psp124BI GAGCTC 1 cut(s) 225
Psp1406I AACGTT 1 cut(s) 1106
Psp6I CCWGG 7 cut(s) 115, 676, 768, 1993, 2791, 3601, 3800
PspGI CCWGG 7 cut(s) 115, 676, 768, 1993, 2791, 3601, 3800
PspN4I GGNNCC 7 cut(s) 774, 1336, 2289, 2349, 2439, 3185, 3319
PspPI GGNCC 5 cut(s) 113, 773, 1335, 2509, 2838
PsrI GAACNNNNNNTAC 2 cut(s) 3279, 3311
PstNI CAGNNNCTG 2 cut(s) 904, 1994
PsuI RGATCY 2 cut(s) 2287, 3144
RsaI GTAC 7 cut(s) 103, 723, 1903, 2768, 2919, 3197, 3610
RsaNI GTAC 7 cut(s) 102, 722, 1902, 2767, 2918, 3196, 3609
RseI CAYNNNNRTG 3 cut(s) 1329, 2696, 3846
SacI GAGCTC 1 cut(s) 225
SatI GCNGC 6 cut(s) 794, 988, 1729, 1853, 2232, 2380
Sau96I GGNCC 5 cut(s) 113, 773, 1335, 2509, 2838
ScaI AGTACT 1 cut(s) 3610
SchI GAGTC 4 cut(s) 1810, 1961, 2636, 3647
ScrFI CCNGG 8 cut(s) 117, 678, 770, 1008, 1995, 2793, 3603, 3802
SduI GDGCHC 4 cut(s) 225, 3085, 3322, 3853
SfaNI GCATC 8 cut(s) 606, 999, 1429, 2507, 2536, 2918, 3619, 3721
SfcI CTRYAG 2 cut(s) 1592, 2127
Sfr274I CTCGAG 1 cut(s) 1811
SfuI TTCGAA 1 cut(s) 3375
SinI GGWCC 4 cut(s) 113, 773, 1335, 2509
SlaI CTCGAG 1 cut(s) 1811
SmiMI CAYNNNNRTG 3 cut(s) 1329, 2696, 3846
SmlI CTYRAG 7 cut(s) 272, 1681, 1811, 1825, 2738, 3020, 3159
SmoI CTYRAG 7 cut(s) 272, 1681, 1811, 1825, 2738, 3020, 3159
SphI GCATGC 1 cut(s) 3244
SsiI CCGC 7 cut(s) 988, 2232, 2380, 3187, 3501, 3755, 3836
SspI AATATT 1 cut(s) 1248
SspMI CTAG 5 cut(s) 1577, 1625, 1676, 2531, 3822
SstI GAGCTC 1 cut(s) 225
StyD4I CCNGG 8 cut(s) 115, 676, 768, 1006, 1993, 2791, 3601, 3800
StyI CCWWGG 6 cut(s) 282, 1609, 2386, 2502, 2676, 3490
TaaI ACNGT 9 cut(s) 93, 548, 900, 1406, 1596, 2467, 3124, 3300, 3647
TaiI ACGT 5 cut(s) 470, 688, 1109, 2768, 3879
TaqI TCGA 9 cut(s) 927, 1812, 2186, 2853, 3007, 3375, 3441, 3464, 3531
TatI WGTACW 4 cut(s) 721, 1901, 2917, 3608
TauI GCSGC 3 cut(s) 990, 2234, 2382
TscAI CASTG 5 cut(s) 96, 166, 1090, 1914, 3903
TseFI GTSAC 2 cut(s) 1960, 3434
TseI GCWGC 3 cut(s) 793, 1728, 1852
Tsp45I GTSAC 2 cut(s) 1960, 3434
TspGWI ACGGA 1 cut(s) 1857
TspRI CASTG 5 cut(s) 96, 166, 1090, 1914, 3903
Van91I CCANNNNNTGG 1 cut(s) 1154
Vha464I CTTAAG 2 cut(s) 1681, 3020
VpaK11BI GGWCC 4 cut(s) 113, 773, 1335, 2509
VspI ATTAAT 1 cut(s) 804
XceI RCATGY 2 cut(s) 979, 3244
XcmI CCANNNNNNNNNTGG 2 cut(s) 289, 2500
XhoI CTCGAG 1 cut(s) 1811
XmiI GTMKAC 1 cut(s) 183
XmnI GAANNNNTTC 6 cut(s) 239, 267, 651, 1239, 3470, 3527
XspI CTAG 5 cut(s) 1577, 1625, 1676, 2531, 3822
ZrmI AGTACT 1 cut(s) 3610
Zsp2I ATGCAT 3 cut(s) 199, 621, 2500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.