Prupe.8G005400_v2.0.a1

NB-ARC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000129
Physical Location & Seq
Forward (+)
419935 .. 426896
6962 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G005400.1

Sequence Viewer

Length: 5001 bp
ATGATCACCCAAATAGATATTCCTTCTTCATCTTCTTCTTCTTCTCCTCCGACCCCTCGATGGACATACGATGTGTTCCTCAGTTTCAGAGGAGAAGACACCCGCACAAATTTCACAGACTTTCTGTATACTTCTCTGATACAGAAAGGAATATTCACATTTAGAGATGATGAAGAACTTGAGAGGGGAAAGCCCATAGCTCCAAAACTCTTGAAAGCAATCGAAGCATCAAGATATGTAATTGTCATTCTTTCACGAAACTATGCCAATTCTACATGGTGCTTGGATGAGCTTGTAAAGGCTGTTGAATGCATGAACCTGATGGGACAAACAATACTCCCAGTTTTCTATCATGTGGATCCATCCGAGGTACGAAAACAGAAAGCAGATTTTGGGGAAGCCTTCTCTAAGCATGAAGAAACCTTTAAAGACAATAAACAGAATGTGCAAAGATGGAGAGATGCACTTACTCAAGTTTCCAATCTCTCTGGGTGGCATTTACACGATGGTTATGAATCAAAAGTTATTCAAGATATCGTAGGAAAGATTTTCACTGAATTAAATCAAACAATCTCAAGTGTATCCACAGATTTAGTTGGGATGGATTCTCGCGTGAAAGAAATGCTTTCTTGCTTAGACATAGGGCTGCATAAAGTTTGTGTCATAGGGATTTTGGGCATTGGGGGAATAGGTAAGACAACTGTTGCAAGAGTTGTTTACGAGAGGATATGTGCTCAATTCGAAGCTTGTAGCTTTCTTGCCAATGTTAGAGAGGTAACTGAAAAACAAGGCCTAGTTGATTTGCAAAAGCAACTTCTTTCAGATATCTTGCTGGAAAGTAATGTAAATGTACATAATGTGTATAAGGGGATCAGTTTAATAAGGCAGAGACTACGTGCTAAAACGGTTCTTATCATTCTTGATGATGTCGATACGCTGGAACAACTGGAAGCATTATGTCATCAGAGTTGGTTTGGTTCAGGGAGTAGAATTGTCATAACATCAAGAGATGAACATTTGTTGAGCGCATTTGGAGTGAATAAAATGTATAAGGTTAAGGAATTAAATGATTCTGAAGCTCTGAAACTCCTTAGTCGGAAAGCCTTTAAGAAAGAGCAAGTTGGAGAAGGTTATCGCAATCTGTCTAAGAATGTTGTTGAATACGCCAGTGGCCTTCCATTGGCTCTTACAGTTATGGGTTCATTCCTTTTCGGTAAAAGCGTTAAAGAATGGTCCAGTGCATTGGATAGACTAAAAGAAAATCCCGAGAAAGGAATTATTGATGTGCTTAAAGTAAGCTTTGACGCATTAAAAGTCACAGAGAAAAAGGTATTTCTGGACATTGCATGTTTCTTTAAAGGGGAGGACAAAGATCGTGTAGCAAAAATACTAGAAAGTGGTTGCGGATACAGTCCAGACATTGATATAAAAGTTCTCATAGAAAAATCTCTAATAACTCTATTTGGAAAAAAATTGTGTATGCATGATTTGATACAAGAATTGGGTTGGGAAATTGTTCGTCAAGAATGTCGTGAAGATCCAGGAAAACGTAGCAGGTTGTGGCTTCCCAAGGATATCATCCCCGTACTTGCAAAAAATAAGGGAACAGATACAATTGAAGGTATATTCCTCAACTTGCCGAAACAAGAGGAGATTCACTTGAATGCTGATTCCTTCTCAAAGATGTCCAACCTAAGATTGCTCAGAATTTGTAATGTGGCCTCTCCTGGATCCATTGAATATCTTTCTAATGAGTTACAACTTTTGGAATGGCACGCATGTCCGTTAAATTATTTGCCGTCAAAATTTCAATCAGATAAGCTTGTTGAACTCAAAATGCATTTGAGCCGTGTCAAACAACTGTGGAATGGAAATGAAAGCTGGAGCATGCTAAAGTGCATCGATCTGAGTGATTCCCAATACCTGATCAAAACCCCAAACTTCACTAGGGCTCCAAATATTGAGATGTTGGTGCTTCAAGGCTGTTCAAGATTGGTTGATGTTCACCCGTCCATGGGAATTCTCAAACAGCTTATCTTGCTGAATATGAGAAACTGCAAATCTGTAAAGACTCTTCCTCCTTTCATTAGTTTGGAATCTCTTCAAAGTTTAACTCTCTCTGCTTGTTCAAGACTCAAGAGGTTTCCTGAAATTCAAGGAGATATGAAAACCTTGTTAGAGCTCTATTTAGATGGGACTGCTATAGAGGAATTACCTTCATCGATTGAACGTTTGACAGGTCTTGCTTTGTTGAATTTAGGAAACTGCAAAAACCTTTTCCATATCCCAAGTACCATCCAATGTCTGACATCTCTGAAAAGTCTCATTCTAACTGGTTGCTCAGAACTTCAAGACATACCTGAGAATCTGAATTGTGTGGAATATCTTGAGGAGCTTGATATAAGTGGAACTGCTATAAGAAAATCATGGTTTGTTGTAGGTATGAAGAATCTAAAGTATCTATCATTCCAAGGATGTAAAGATCAACCTTCAAAATCATGGCATTCCCTGATCTTTAATGGTTGCTGGTGTAGAGAGGAAGTTGCCACGCGTTTGTTATTGCCTAATTCGTTCTCAAGTTTAACTTCTTTGGCAGAGCTGGACTTAAGTGATTGCAGTCTGATGGATGGAGAGATTCCCAACGATATTGGAAGCTTATTCTCCTTAAAAAAATTAAATTTAAGTGGTAGTAATTTTGTTTGCTTACCAGAAAGCATCTCTCAACTCTCGAAGCTTGAAGATCTCAAGTTGATCAGTTGTCGTAAGCTAAAATCTCTGCCTAAGAAGCTTCCATTAAGTATTCGACACGTGAATGCAGATGATTGTACATCACTGATAGATTCCCCAAATAAATTAAAAGTATGGACTTCAGCTGTTTCGGGAGTGACTACTATCAGTTCCTTCATTTCATCCAAGAATCAAGAGTGTTCTACTTCAGAGAGAGAGTGGAAATATGGCAAGACTTGGACTCCAACAACTGTCCCAGGATGTAGTACCATTAGTTTCGTCAAATCAGATGAGCATCAAGAATGGAAACAAGTTGATGGATTTGTACTGCCAACTCAATTGTTTAAAAAAGACCTAGAGCTATTGGATTTAAGGTCATGTACCTTACAGTCTGGCACTCCTCAAAGTGAAATTCCAGAGTTTTTCAGCCATATAGTGAATGGGGGAAACATAGAAATCCCGATATATGCGAATATGAAGAATGATAGGAAGTGGATGGGGGTTGCCCTGTGTGCTCTTTTTTCAGCCAAGGGAAATCCTATAGTCTCCCCCACTGAATCAGATTCAGAAACTTCGAATTACTTCTATCAGTTCCAAATTGGAACTAATATATTTGTACTGGTACCAGATCCCGATAGTGATCGCATAATAGATTTACAAACGCACTCTCATTTTCTTTGTGTGTTCTATGCATCTTGGCTGCAGTTTCCAGTGTTGTTAAATAAATCCAGTCAAATGTGGGCTTCATTCAATACCTCTAATCCTTGCATGGAGGTCCAGCAATGTGGGATTCATTTAGTTTACGAGCAAGATGTTGCTGTGTTTATGCAAACATTCATGCAGTGTGCTTTTGGTACTGAACGCCAACCTGTACATCAAACCCCATTAGTTATCGGAAAAGAAGATCAAGATATCCCTTCTGATGATAACTCCACTCCAAATGAAGTTGACAAAGCTACATCTGAATATGGATGGTTTAATGTAGTCGATAAAATTTTGAGATGGGAGAAATTAATTCCAACTTCCCCAGATGCCTCCATAGTTCTGCTGAGATACCTTCAGGGATTAAACGAAATGCAGCAACCCTATCGCTTTTTCATAAGTGGAAGCCCAGCGTGGTTCAACCCTAAAAAGGGTTCCTCCGTGTCAATCGAGCTGCCACCAAATCTTCCCCAGAGTAACAAGTGGATGGGATTTGCTCTATGTGCCTCTGTTGCAGTGGACCACCGGCGTATAGTAAAAGAGAGTTTTGGTTTTTCTTGTCGACTTCAAACGGACAAATTTAATACTGAGATGTTCATAAGCTCAACCAGCATACATGATAAAGATCAACTTCACATTATTTACATTCCGCGGGCACATTTTAATGAGCGGTTCGTGGCTATATCCAGTAGCATCATCAGCACTTCCTTTACAACGGATAGCCCTGGTGGTGTCCATGTTCAAATTTGTGGGCTTCGTATCTTGTACCAGCAAGATTTACAAGGGTTTGTCCAGGCAATCACCCAATGTATATTGCGCAGCTCTTCAGATTTTGCAATTAATTGTAATGAACAACGAGTGGTACAAGATTGGATAAGTTTGATGACATTGCACAGTCGTAAAGTTGAGACAACTGTAAGGGAAAGGGATATTTCCCGAGAATCAAGTCAACTAACTGCAGAAGAGGGCTGTGAGGGACATTTCAGTACCACACACGAATGGGAGCAGTTTCAGTTGATGTCTCGACAATATAGAAATATGGACTGGTCTGTGGCTCAATTTGCATGTCACTACTCTGGAATAAAAATTCCTAATTGGTTCACGTTGACACAAAATTTGCATGAAGGCTTAGGCAACTCTGCAGAAATCCAAGTGCCCCAAAATTTGTACGAGGATGGCAATTGGAAAGGGATTGCTATATGCGCACATATGTCCATCCGTGAACATCCCACCATCATTCTTGACACTCCCGACTCAGAGTTTACTCGTGAGCTCTTTTGTCATCTGGACACCAACTTTTCTGGGGTCAAATTCCGACTTGTAGAGCGTACAAATGACAAAGCCATGTGGTTGAATAATGCCTGCAATTTCAGTTGGTTCATCTACATGCCACGTGCTCAGTTTTCTGAATCCTTGAATCAATGCAATCTAGTCAGGGTAACTTTTGGGTCCAATAGCTCAGGCTTAGGCGTGCATAATTCTGCCCTTCGTCTAGTATTTAACAAGGATTTGGAGCAGCTTATACCAACATTGGCCAGCTGCCGCTTATTTTCAGACCGCCAATGTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

1667

Amino Acids

188.58

Weight (kDa)

6.12

Isoelectric Point (pI)

45.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 4247, 4633
Acc36I ACCTGC 1 cut(s) 1545
Acc65I GGTACC 1 cut(s) 3349
AccB1I GGYRCC 1 cut(s) 3349
AccBSI CCGCTC 1 cut(s) 4099
AccI GTMKAC 2 cut(s) 128, 3991
AccII CGCG 3 cut(s) 612, 2551, 4081
AciI CCGC 7 cut(s) 103, 1404, 4079, 4081, 4099, 4972, 4987
AclI AACGTT 1 cut(s) 2230
AclWI GGATC 7 cut(s) 353, 366, 878, 1532, 1725, 1738, 3350
AcoI YGGCCR 1 cut(s) 4962
AcuI CTGAAG 5 cut(s) 1095, 2853, 2919, 3770, 4239
AcvI CACGTG 2 cut(s) 2809, 4823
AfiI CCNNNNNNNGG 7 cut(s) 60, 1180, 1271, 2014, 2015, 3859, 3860
AflII CTTAAG 1 cut(s) 2605
AflIII ACRYGT 2 cut(s) 2549, 2806
AjnI CCWGG 5 cut(s) 1540, 1726, 2983, 4153, 4221
AjuI GAANNNNNNNTTGG 1 cut(s) 35
Alw21I GWGCWC 5 cut(s) 736, 2184, 3244, 4704, 4828
Alw26I GTCTC 5 cut(s) 883, 2327, 3277, 4331, 4455
AlwI GGATC 7 cut(s) 353, 366, 878, 1532, 1725, 1738, 3350
Ama87I CYCGRG 2 cut(s) 1265, 4365
AoxI GGCC 4 cut(s) 790, 1171, 1719, 4962
ApeKI GCWGC 7 cut(s) 646, 3427, 3805, 3883, 4248, 4945, 4968
ArsI GACNNNNNNTTYG 2 cut(s) 4528, 4560
AseI ATTAAT 2 cut(s) 3740, 4269
Asp700I GAANNNNTTC 3 cut(s) 1515, 2100, 3308
Asp718I GGTACC 1 cut(s) 3349
AspLEI GCGC 3 cut(s) 1028, 4248, 4634
AspS9I GGNCC 4 cut(s) 1233, 3502, 3949, 4878
AsuHPI GGTGA 2 cut(s) 1997, 4222
AsuII TTCGAA 2 cut(s) 741, 3302
AvaI CYCGRG 2 cut(s) 1265, 4365
AvaII GGWCC 4 cut(s) 1233, 3502, 3949, 4878
BaeGI GKGCMC 2 cut(s) 4087, 4587
BalI TGGCCA 1 cut(s) 4964
BamHI GGATCC 2 cut(s) 358, 1730
BanI GGYRCC 1 cut(s) 3349
BanII GRGCYC 3 cut(s) 1954, 2184, 4704
BarI GAAGNNNNNNTAC 2 cut(s) 2058, 2090
BauI CACGAG 1 cut(s) 4695
BbrPI CACGTG 2 cut(s) 2809, 4823
BbsI GAAGAC 1 cut(s) 102
Bbv12I GWGCWC 5 cut(s) 736, 2184, 3244, 4704, 4828
BbvI GCAGC 7 cut(s) 633, 3414, 3817, 3870, 4260, 4955, 4957
BceAI ACGGC 2 cut(s) 1783, 1833
BcgI CGANNNNNNTGC 2 cut(s) 3797, 3831
BciT130I CCWGG 5 cut(s) 1542, 1728, 2985, 4155, 4223
BciVI GTATCC 2 cut(s) 592, 1400
BclI TGATCA 3 cut(s) 3, 1926, 2751
BcoDI GTCTC 5 cut(s) 883, 2327, 3277, 4331, 4455
BfaI CTAG 6 cut(s) 794, 1391, 1947, 3083, 4859, 4922
BfmI CTRYAG 5 cut(s) 2202, 3267, 3428, 4386, 4569
BfrI CTTAAG 1 cut(s) 2605
BfuAI ACCTGC 1 cut(s) 1545
BfuI GTATCC 2 cut(s) 592, 1400
BglII AGATCT 1 cut(s) 2740
BisI GCNGC 8 cut(s) 647, 3428, 3806, 3884, 4249, 4946, 4969, 4972
BlsI GCNGC 8 cut(s) 648, 3429, 3807, 3885, 4250, 4947, 4970, 4973
Bme1390I CCNGG 5 cut(s) 1542, 1728, 2985, 4155, 4223
Bme18I GGWCC 4 cut(s) 1233, 3502, 3949, 4878
BmeT110I CYCGRG 2 cut(s) 1265, 4365
BmgT120I GGNCC 4 cut(s) 1233, 3502, 3949, 4878
BmiI GGNNCC 6 cut(s) 360, 1732, 1953, 3351, 3865, 4879
BmrFI CCNGG 5 cut(s) 1542, 1728, 2985, 4155, 4223
BmrI ACTGGG 1 cut(s) 335
BmsI GCATC 8 cut(s) 236, 451, 1908, 2724, 3031, 3428, 3748, 4131
BmuI ACTGGG 1 cut(s) 335
BpiI GAAGAC 1 cut(s) 102
BpmI CTGGAG 1 cut(s) 1903
Bpu10I CCTNAGC 3 cut(s) 4558, 4888, 4894
Bpu14I TTCGAA 2 cut(s) 741, 3302
BpuEI CTTGAG 7 cut(s) 200, 456, 559, 2120, 2408, 2560, 2729
Bsa29I ATCGAT 2 cut(s) 1902, 2222
BsaAI YACGTR 3 cut(s) 896, 2809, 4823
BsaBI GATNNNNATC 3 cut(s) 3021, 3366, 4053
BsaJI CCNNGG 8 cut(s) 366, 1569, 2013, 2470, 2983, 3255, 4079, 4153
BsaXI ACNNNNNCTCC 6 cut(s) 1936, 1966, 2062, 2092, 2953, 2983
Bsc4I CCNNNNNNNGG 7 cut(s) 60, 1180, 1271, 2014, 2015, 3859, 3860
Bse118I RCCGGY 1 cut(s) 3954
Bse3DI GCAATG 3 cut(s) 1341, 3515, 4316
Bse8I GATNNNNATC 3 cut(s) 3021, 3366, 4053
BseBI CCWGG 5 cut(s) 1542, 1728, 2985, 4155, 4223
BseCI ATCGAT 2 cut(s) 1902, 2222
BseDI CCNNGG 8 cut(s) 366, 1569, 2013, 2470, 2983, 3255, 4079, 4153
BseJI GATNNNNATC 3 cut(s) 3021, 3366, 4053
BseLI CCNNNNNNNGG 7 cut(s) 60, 1180, 1271, 2014, 2015, 3859, 3860
BseMI GCAATG 3 cut(s) 1341, 3515, 4316
BseRI GAGGAG 5 cut(s) 36, 105, 1664, 2405, 3117
BseSI GKGCMC 2 cut(s) 4087, 4587
BseXI GCAGC 7 cut(s) 633, 3414, 3817, 3870, 4260, 4955, 4957
BseYI CCCAGC 1 cut(s) 3838
Bsh1236I CGCG 3 cut(s) 612, 2551, 4081
BshFI GGCC 4 cut(s) 792, 1173, 1721, 4964
BshNI GGYRCC 1 cut(s) 3349
BshVI ATCGAT 2 cut(s) 1902, 2222
BsiHKAI GWGCWC 5 cut(s) 736, 2184, 3244, 4704, 4828
BsiHKCI CYCGRG 2 cut(s) 1265, 4365
BsiSI CCGG 1 cut(s) 3955
BslFI GGGAC 4 cut(s) 339, 2209, 2966, 4419
BslI CCNNNNNNNGG 7 cut(s) 60, 1180, 1271, 2014, 2015, 3859, 3860
BsmAI GTCTC 5 cut(s) 883, 2327, 3277, 4331, 4455
BsmFI GGGAC 4 cut(s) 339, 2209, 2966, 4419
BsmI GAATGC 4 cut(s) 314, 1669, 2503, 2818
BsnI GGCC 4 cut(s) 792, 1173, 1721, 4964
BsoBI CYCGRG 2 cut(s) 1265, 4365
Bsp119I TTCGAA 2 cut(s) 741, 3302
Bsp1286I GDGCHC 8 cut(s) 736, 1954, 2184, 3244, 4087, 4587, 4704, 4828
Bsp1407I TGTACA 3 cut(s) 850, 2825, 3598
Bsp19I CCATGG 1 cut(s) 2013
BspACI CCGC 7 cut(s) 103, 1404, 4079, 4081, 4099, 4972, 4987
BspANI GGCC 4 cut(s) 792, 1173, 1721, 4964
BspDI ATCGAT 2 cut(s) 1902, 2222
BspFNI CGCG 3 cut(s) 612, 2551, 4081
BspLI GGNNCC 6 cut(s) 360, 1732, 1953, 3351, 3865, 4879
BspMAI CTGCAG 3 cut(s) 3432, 4390, 4573
BspMI ACCTGC 1 cut(s) 1545
BspPI GGATC 7 cut(s) 353, 366, 878, 1532, 1725, 1738, 3350
BspQI GCTCTTC 1 cut(s) 4258
BspT104I TTCGAA 2 cut(s) 741, 3302
BspT107I GGYRCC 1 cut(s) 3349
BspTI CTTAAG 1 cut(s) 2605
BsrBI CCGCTC 1 cut(s) 4099
BsrDI GCAATG 3 cut(s) 1341, 3515, 4316
BsrFI RCCGGY 1 cut(s) 3954
BsrGI TGTACA 3 cut(s) 850, 2825, 3598
BssAI RCCGGY 1 cut(s) 3954
BssECI CCNNGG 8 cut(s) 366, 1569, 2013, 2470, 2983, 3255, 4079, 4153
BssNAI GTATAC 1 cut(s) 129
BssSI CACGAG 1 cut(s) 4695
BssT1I CCWWGG 4 cut(s) 1569, 2013, 2470, 3255
Bst1107I GTATAC 1 cut(s) 129
Bst2BI CACGAG 1 cut(s) 4695
Bst2UI CCWGG 5 cut(s) 1542, 1728, 2985, 4155, 4223
Bst4CI ACNGT 9 cut(s) 703, 907, 1192, 1412, 1863, 2980, 3117, 4325, 4345
Bst6I CTCTTC 4 cut(s) 2079, 2106, 4258, 4386
BstAFI CTTAAG 1 cut(s) 2605
BstAUI TGTACA 3 cut(s) 850, 2825, 3598
BstBAI YACGTR 3 cut(s) 896, 2809, 4823
BstBI TTCGAA 2 cut(s) 741, 3302
BstC8I GCNNGC 6 cut(s) 1776, 1889, 4083, 4792, 4901, 4966
BstDSI CCRYGG 2 cut(s) 2013, 4079
BstFNI CGCG 3 cut(s) 612, 2551, 4081
BstHHI GCGC 3 cut(s) 1028, 4248, 4634
BstMAI GTCTC 5 cut(s) 883, 2327, 3277, 4331, 4455
BstNI CCWGG 5 cut(s) 1542, 1728, 2985, 4155, 4223
BstNSI RCATGY 5 cut(s) 1350, 1782, 1891, 4497, 4819
BstSCI CCNGG 5 cut(s) 1540, 1726, 2983, 4153, 4221
BstSFI CTRYAG 5 cut(s) 2202, 3267, 3428, 4386, 4569
BstSLI GKGCMC 2 cut(s) 4087, 4587
BstUI CGCG 3 cut(s) 612, 2551, 4081
BstV1I GCAGC 7 cut(s) 633, 3414, 3817, 3870, 4260, 4955, 4957
BstV2I GAAGAC 1 cut(s) 102
BstX2I RGATCY 5 cut(s) 358, 1537, 1730, 2740, 3355
BstXI CCANNNNNNTGG 2 cut(s) 1243, 3512
BstYI RGATCY 5 cut(s) 358, 1537, 1730, 2740, 3355
BstZ17I GTATAC 1 cut(s) 129
Bsu15I ATCGAT 2 cut(s) 1902, 2222
BsuI GTATCC 2 cut(s) 592, 1400
BsuRI GGCC 4 cut(s) 792, 1173, 1721, 4964
BsuTUI ATCGAT 2 cut(s) 1902, 2222
BtgI CCRYGG 2 cut(s) 2013, 4079
BtsI GCAGTG 2 cut(s) 3575, 3951
BtsIMutI CAGTG 8 cut(s) 552, 1174, 1243, 2831, 3279, 3444, 3575, 3951
BveI ACCTGC 1 cut(s) 1545
Cac8I GCNNGC 6 cut(s) 1776, 1889, 4083, 4792, 4901, 4966
CfoI GCGC 3 cut(s) 1028, 4248, 4634
Cfr10I RCCGGY 1 cut(s) 3954
Cfr13I GGNCC 4 cut(s) 1233, 3502, 3949, 4878
Cfr42I CCGCGG 1 cut(s) 4082
ClaI ATCGAT 2 cut(s) 1902, 2222
CseI GACGC 1 cut(s) 1313
DraI TTTAAA 3 cut(s) 427, 1357, 3073
EaeI YGGCCR 1 cut(s) 4962
Eam1104I CTCTTC 4 cut(s) 2079, 2106, 4258, 4386
EarI CTCTTC 4 cut(s) 2079, 2106, 4258, 4386
Ecl136II GAGCTC 2 cut(s) 2182, 4702
Eco130I CCWWGG 4 cut(s) 1569, 2013, 2470, 3255
Eco147I AGGCCT 1 cut(s) 792
Eco24I GRGCYC 3 cut(s) 1954, 2184, 4704
Eco32I GATATC 4 cut(s) 535, 826, 1576, 3640
Eco47I GGWCC 4 cut(s) 1233, 3502, 3949, 4878
Eco53kI GAGCTC 2 cut(s) 2182, 4702
Eco57I CTGAAG 5 cut(s) 1095, 2853, 2919, 3770, 4239
Eco72I CACGTG 2 cut(s) 2809, 4823
Eco88I CYCGRG 2 cut(s) 1265, 4365
EcoICRI GAGCTC 2 cut(s) 2182, 4702
EcoRI GAATTC 1 cut(s) 2019
EcoRII CCWGG 5 cut(s) 1540, 1726, 2983, 4153, 4221
EcoRV GATATC 4 cut(s) 535, 826, 1576, 3640
EcoT14I CCWWGG 4 cut(s) 1569, 2013, 2470, 3255
EcoT22I ATGCAT 4 cut(s) 314, 1485, 1842, 3421
EcoT38I GRGCYC 3 cut(s) 1954, 2184, 4704
ErhI CCWWGG 4 cut(s) 1569, 2013, 2470, 3255
FalI AAGNNNNNCTT 6 cut(s) 609, 641, 2569, 2601, 4044, 4076
FaqI GGGAC 4 cut(s) 339, 2209, 2966, 4419
FauI CCCGC 2 cut(s) 110, 4074
FauNDI CATATG 1 cut(s) 4638
FbaI TGATCA 3 cut(s) 3, 1926, 2751
FblI GTMKAC 2 cut(s) 128, 3991
Fnu4HI GCNGC 8 cut(s) 647, 3428, 3806, 3884, 4249, 4946, 4969, 4972
FriOI GRGCYC 3 cut(s) 1954, 2184, 4704
Fsp4HI GCNGC 8 cut(s) 647, 3428, 3806, 3884, 4249, 4946, 4969, 4972
FspAI RTGCGCAY 1 cut(s) 4633
FspBI CTAG 6 cut(s) 794, 1391, 1947, 3083, 4859, 4922
FspI TGCGCA 2 cut(s) 4247, 4633
GlaI GCGC 3 cut(s) 1027, 4247, 4633
GluI GCNGC 8 cut(s) 647, 3428, 3806, 3884, 4249, 4946, 4969, 4972
GsaI CCCAGC 1 cut(s) 3842
GsuI CTGGAG 1 cut(s) 1903
HaeIII GGCC 4 cut(s) 792, 1173, 1721, 4964
HapII CCGG 1 cut(s) 3955
HgaI GACGC 1 cut(s) 1313
HhaI GCGC 3 cut(s) 1028, 4248, 4634
Hin6I GCGC 3 cut(s) 1026, 4246, 4632
HinP1I GCGC 3 cut(s) 1026, 4246, 4632
HincII GTYRAC 4 cut(s) 3676, 3992, 4379, 4536
HindII GTYRAC 4 cut(s) 3676, 3992, 4379, 4536
HindIII AAGCTT 6 cut(s) 744, 1297, 1820, 2653, 2732, 2786
HpaII CCGG 1 cut(s) 3955
HphI GGTGA 2 cut(s) 1997, 4222
HpyCH4III ACNGT 9 cut(s) 703, 907, 1192, 1412, 1863, 2980, 3117, 4325, 4345
HpyCH4IV ACGT 6 cut(s) 895, 1549, 2230, 2808, 4532, 4822
HpySE526I ACGT 6 cut(s) 895, 1549, 2230, 2808, 4532, 4822
HspAI GCGC 3 cut(s) 1026, 4246, 4632
KpnI GGTACC 1 cut(s) 3353
Ksp22I TGATCA 3 cut(s) 3, 1926, 2751
KspI CCGCGG 1 cut(s) 4082
LguI GCTCTTC 1 cut(s) 4258
LmnI GCTCC 6 cut(s) 205, 1884, 1957, 2392, 4432, 4942
Lsp1109I GCAGC 7 cut(s) 633, 3414, 3817, 3870, 4260, 4955, 4957
LweI GCATC 8 cut(s) 236, 451, 1908, 2724, 3031, 3428, 3748, 4131
MaeI CTAG 6 cut(s) 794, 1391, 1947, 3083, 4859, 4922
MaeII ACGT 6 cut(s) 895, 1549, 2230, 2808, 4532, 4822
MaeIII GTNAC 7 cut(s) 775, 1315, 1755, 2884, 3905, 4496, 4867
MbiI CCGCTC 1 cut(s) 4099
MfeI CAATTG 3 cut(s) 1614, 3065, 4609
MflI RGATCY 5 cut(s) 358, 1537, 1730, 2740, 3355
MhlI GDGCHC 8 cut(s) 736, 1954, 2184, 3244, 4087, 4587, 4704, 4828
MlsI TGGCCA 1 cut(s) 4964
MluI ACGCGT 1 cut(s) 2549
MluNI TGGCCA 1 cut(s) 4964
MlyI GAGTC 4 cut(s) 2065, 2127, 2962, 4676
MmeI TCCRAC 7 cut(s) 74, 1076, 1102, 1713, 2996, 3770, 4768
Mox20I TGGCCA 1 cut(s) 4964
Mph1103I ATGCAT 4 cut(s) 314, 1485, 1842, 3421
MroXI GAANNNNTTC 3 cut(s) 1515, 2100, 3308
MscI TGGCCA 1 cut(s) 4964
MslI CAYNNNNRTG 5 cut(s) 1662, 2811, 4092, 4426, 4814
Msp20I TGGCCA 1 cut(s) 4964
MspA1I CMGCKG 3 cut(s) 2873, 4081, 4968
MspCI CTTAAG 1 cut(s) 2605
MspI CCGG 1 cut(s) 3955
MspR9I CCNGG 5 cut(s) 1542, 1728, 2985, 4155, 4223
MunI CAATTG 3 cut(s) 1614, 3065, 4609
Mva1269I GAATGC 4 cut(s) 314, 1669, 2503, 2818
MvaI CCWGG 5 cut(s) 1542, 1728, 2985, 4155, 4223
MvnI CGCG 3 cut(s) 612, 2551, 4081
NcoI CCATGG 1 cut(s) 2013
NdeI CATATG 1 cut(s) 4638
NlaIV GGNNCC 6 cut(s) 360, 1732, 1953, 3351, 3865, 4879
NmuCI GTSAC 3 cut(s) 1315, 2884, 4496
NsbI TGCGCA 2 cut(s) 4247, 4633
NsiI ATGCAT 4 cut(s) 314, 1485, 1842, 3421
NspI RCATGY 5 cut(s) 1350, 1782, 1891, 4497, 4819
NspV TTCGAA 2 cut(s) 741, 3302
PaeI GCATGC 1 cut(s) 1891
PceI AGGCCT 1 cut(s) 792
PciSI GCTCTTC 1 cut(s) 4258
PcsI WCGNNNNNNNCGW 1 cut(s) 1218
PctI GAATGC 4 cut(s) 314, 1669, 2503, 2818
PdmI GAANNNNTTC 3 cut(s) 1515, 2100, 3308
PfoI TCCNGGA 2 cut(s) 1540, 1726
PkrI GCNGC 8 cut(s) 648, 3429, 3807, 3885, 4250, 4947, 4970, 4973
PleI GAGTC 4 cut(s) 2065, 2127, 2962, 4676
PmaCI CACGTG 2 cut(s) 2809, 4823
PmlI CACGTG 2 cut(s) 2809, 4823
PpsI GAGTC 4 cut(s) 2065, 2127, 2962, 4676
Ppu21I YACGTR 3 cut(s) 896, 2809, 4823
PshBI ATTAAT 2 cut(s) 3740, 4269
Psp124BI GAGCTC 2 cut(s) 2184, 4704
Psp1406I AACGTT 1 cut(s) 2230
Psp6I CCWGG 5 cut(s) 1540, 1726, 2983, 4153, 4221
PspCI CACGTG 2 cut(s) 2809, 4823
PspFI CCCAGC 1 cut(s) 3838
PspGI CCWGG 5 cut(s) 1540, 1726, 2983, 4153, 4221
PspN4I GGNNCC 6 cut(s) 360, 1732, 1953, 3351, 3865, 4879
PspPI GGNCC 4 cut(s) 1233, 3502, 3949, 4878
PstI CTGCAG 3 cut(s) 3432, 4390, 4573
PsuI RGATCY 5 cut(s) 358, 1537, 1730, 2740, 3355
PvuII CAGCTG 2 cut(s) 2873, 4968
RseI CAYNNNNRTG 5 cut(s) 1662, 2811, 4092, 4426, 4814
SacI GAGCTC 2 cut(s) 2184, 4704
SacII CCGCGG 1 cut(s) 4082
SalI GTCGAC 1 cut(s) 3990
SapI GCTCTTC 1 cut(s) 4258
SatI GCNGC 8 cut(s) 647, 3428, 3806, 3884, 4249, 4946, 4969, 4972
Sau96I GGNCC 4 cut(s) 1233, 3502, 3949, 4878
SchI GAGTC 4 cut(s) 2065, 2127, 2962, 4676
ScrFI CCNGG 5 cut(s) 1542, 1728, 2985, 4155, 4223
SduI GDGCHC 8 cut(s) 736, 1954, 2184, 3244, 4087, 4587, 4704, 4828
SfaNI GCATC 8 cut(s) 236, 451, 1908, 2724, 3031, 3428, 3748, 4131
SfcI CTRYAG 5 cut(s) 2202, 3267, 3428, 4386, 4569
Sfr303I CCGCGG 1 cut(s) 4082
SfuI TTCGAA 2 cut(s) 741, 3302
SgrAI CRCCGGYG 1 cut(s) 3954
SgrBI CCGCGG 1 cut(s) 4082
SinI GGWCC 4 cut(s) 1233, 3502, 3949, 4878
SmiMI CAYNNNNRTG 5 cut(s) 1662, 2811, 4092, 4426, 4814
SmlI CTYRAG 8 cut(s) 179, 471, 574, 2135, 2387, 2575, 2605, 2744
SmoI CTYRAG 8 cut(s) 179, 471, 574, 2135, 2387, 2575, 2605, 2744
SphI GCATGC 1 cut(s) 1891
SseBI AGGCCT 1 cut(s) 792
SsiI CCGC 7 cut(s) 103, 1404, 4079, 4081, 4099, 4972, 4987
SspI AATATT 2 cut(s) 153, 1960
SspMI CTAG 6 cut(s) 794, 1391, 1947, 3083, 4859, 4922
SstI GAGCTC 2 cut(s) 2184, 4704
StuI AGGCCT 1 cut(s) 792
StyD4I CCNGG 5 cut(s) 1540, 1726, 2983, 4153, 4221
StyI CCWWGG 4 cut(s) 1569, 2013, 2470, 3255
TaaI ACNGT 9 cut(s) 703, 907, 1192, 1412, 1863, 2980, 3117, 4325, 4345
TaiI ACGT 6 cut(s) 898, 1552, 2233, 2811, 4535, 4825
TatI WGTACW 5 cut(s) 850, 2825, 3052, 3343, 3598
TauI GCSGC 1 cut(s) 4974
TscAI CASTG 8 cut(s) 559, 1174, 1243, 2838, 3286, 3444, 3575, 3951
TseFI GTSAC 3 cut(s) 1315, 2884, 4496
TseI GCWGC 7 cut(s) 646, 3427, 3805, 3883, 4248, 4945, 4968
Tsp45I GTSAC 3 cut(s) 1315, 2884, 4496
TspGWI ACGGA 5 cut(s) 1773, 3859, 4016, 4160, 4637
TspRI CASTG 8 cut(s) 559, 1174, 1243, 2838, 3286, 3444, 3575, 3951
Vha464I CTTAAG 1 cut(s) 2605
VpaK11BI GGWCC 4 cut(s) 1233, 3502, 3949, 4878
VspI ATTAAT 2 cut(s) 3740, 4269
XceI RCATGY 5 cut(s) 1350, 1782, 1891, 4497, 4819
XcmI CCANNNNNNNNNTGG 1 cut(s) 3164
XmiI GTMKAC 2 cut(s) 128, 3991
XmnI GAANNNNTTC 3 cut(s) 1515, 2100, 3308
XspI CTAG 6 cut(s) 794, 1391, 1947, 3083, 4859, 4922
Zsp2I ATGCAT 4 cut(s) 314, 1485, 1842, 3421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.