MD05G1002200.v1.1

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000129
Physical Location & Seq
Forward (+)
953513 .. 955380
1868 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1002200.v1.1.491

Sequence Viewer

Length: 1365 bp
ATGCAGGATGATCATGAAGGTTTTCGACATCAAACCCCGTCTCAAGATAACTGCAATCCAATTGAGGTTAATAAGGCTATAGAACTTGAATATGGGTGGTTTAATTTGGTGGATAACATTTTGGAATGGGAGAATTTTACAGCCGCCGAAAAGGGTTCAACAATTCTTTTAAGGAGGAATATTGAGTCACTTCTTCCAAGATATCTGGAGGGACTACACCACATGGGTCAATTTTATCAATTTGGTTTAAGTGGAAGCCCAGCTTGGTTCAATCCTAGAGTCGGGTCCTCCGTTTCAACCCAGCTGCCTAAAACTCTCTACAAAAATAAGAAATGGATGGGAGTTGCTCTATGTGTGTCAATTTCAGTACTGGACTGGCATAAAGTAAAAGGGGGTTATAAAGTTTCTTGTCAAGTAAATTCGGGCAATTTTCATATAGAGTTGTCCCTATGCTCGACCAATTTTATGTGTGATAAAAGTCAACTTTGGATTATTTACATACCGAAGGCAGAGTTGCCGGAATGGTTCACTCGATCAAGTTCAAGAAGCACTTTGTTCGGAATTGACAACTCTGCCGTTGAGGTTCAAGTGTGCGGGTACCGTGTTTTTTACCGGCAAGATTTAAAAGGATTTGTACAGACAATCATCCAGTGCATATTGCGTAGCTCTGACACCACCCTCTTTGAAAAGTATAATAAAAAAATGGTAGAAGATTGGCTAACTTTGGTAAGATGGCAAGGTCTTAAAATTGATAGAGAACTCAGTAGACAATTCAGTTCCTCGCAGCATGAAAGAGAGCTGTTTCAGTTGATCTTGAGCCATTACAGGAATCAGGACTGGTCTGTGGCTGAGTGTACATGTAGGTTCCCTGGAATTGAAATTCCCAAGTGGTTCGTGCATTTGAATAAAGGCGGTTCTGCACAGATACAACTACCTCCAAATTTGTTCGATGATGCTAACTGGATGGGTATTGCTGCATGTTCTTATGCCTCGATCCACGAACATCCAACCGTCATTCTTGACACTCCGGATTCAGAGTTTAGTCGTGCACTGTATTGCTATCTGGACACCAATCTCCCTAATGTCAGACTCCATGGTTTAGAGCATACAAACAAAGCCTTGTGGTTGCATGCTTGCAACTTCACTTGGTTTACGTATGCACCACGTGCTAAATTTTCTGGTTCGCTGAATCAATGCAATCTAGTCAGGGCAACTTTTGGGTCCAATAGCCCAGGCTTAGGACTGCATCAATGTGGTCTTCGTCTAGTGTTTAAGGAGGATGTGGAAGATCTCGTACAAACTTTGACCCTCTGCCGATTATCTGCCAAATGTTATCATTCGGAACAAGCAAGGCAGGGTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

455

Amino Acids

52.16

Weight (kDa)

7.21

Isoelectric Point (pI)

48.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 87 - 208 1.9e-06 C-JID domain
C-JID PF20160 289 - 429 1.6e-12 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 399
Acc65I GGTACC 1 cut(s) 597
AccB1I GGYRCC 1 cut(s) 597
AccI GTMKAC 1 cut(s) 766
AccIII TCCGGA 1 cut(s) 1027
AciI CCGC 3 cut(s) 144, 594, 912
AclWI GGATC 1 cut(s) 988
AcsI RAATTY 5 cut(s) 133, 418, 879, 940, 1172
AcvI CACGTG 1 cut(s) 1166
AdeI CACNNNGTG 1 cut(s) 1166
AfaI GTAC 5 cut(s) 369, 599, 636, 856, 1296
AfiI CCNNNNNNNGG 2 cut(s) 281, 1238
AflIII ACRYGT 1 cut(s) 857
AgsI TTSAA 9 cut(s) 89, 159, 271, 297, 543, 587, 686, 878, 904
AjnI CCWGG 2 cut(s) 868, 1231
AjuI GAANNNNNNNTTGG 2 cut(s) 247, 279
AluBI AGCT 4 cut(s) 263, 304, 666, 799
AluI AGCT 4 cut(s) 263, 304, 666, 799
Alw21I GWGCWC 1 cut(s) 1051
Alw26I GTCTC 1 cut(s) 45
Alw44I GTGCAC 1 cut(s) 1047
AlwI GGATC 1 cut(s) 988
Aor13HI TCCGGA 1 cut(s) 1027
ApaLI GTGCAC 1 cut(s) 1047
ApeKI GCWGC 3 cut(s) 304, 784, 974
ApoI RAATTY 5 cut(s) 133, 418, 879, 940, 1172
Asp700I GAANNNNTTC 1 cut(s) 21
Asp718I GGTACC 1 cut(s) 597
AspS9I GGNCC 2 cut(s) 285, 1221
AvaII GGWCC 2 cut(s) 285, 1221
BaeGI GKGCMC 1 cut(s) 1051
BanI GGYRCC 1 cut(s) 597
BarI GAAGNNNNNNTAC 2 cut(s) 1278, 1310
BbrPI CACGTG 1 cut(s) 1166
BbsI GAAGAC 1 cut(s) 1250
Bbv12I GWGCWC 1 cut(s) 1051
BbvI GCAGC 3 cut(s) 291, 796, 961
BccI CCATC 3 cut(s) 331, 726, 958
BceAI ACGGC 1 cut(s) 560
BcgI CGANNNNNNTGC 2 cut(s) 538, 572
BciT130I CCWGG 2 cut(s) 870, 1233
BclI TGATCA 1 cut(s) 10
BcoDI GTCTC 1 cut(s) 45
BfaI CTAG 3 cut(s) 276, 1202, 1265
BfmI CTRYAG 1 cut(s) 78
BglII AGATCT 1 cut(s) 1288
BisI GCNGC 4 cut(s) 144, 305, 785, 975
BlsI GCNGC 4 cut(s) 145, 306, 786, 976
BmcAI AGTACT 1 cut(s) 369
Bme1390I CCNGG 2 cut(s) 870, 1233
Bme18I GGWCC 2 cut(s) 285, 1221
BmgT120I GGNCC 2 cut(s) 285, 1221
BmiI GGNNCC 4 cut(s) 286, 599, 866, 1222
BmrFI CCNGG 2 cut(s) 870, 1233
BmsI GCATC 2 cut(s) 943, 1255
BpiI GAAGAC 1 cut(s) 1250
BpmI CTGGAG 1 cut(s) 227
Bpu10I CCTNAGC 1 cut(s) 1237
BpuEI CTTGAG 2 cut(s) 27, 835
BsaAI YACGTR 2 cut(s) 1155, 1166
BsaJI CCNNGG 3 cut(s) 868, 1093, 1231
BsaWI WCCGGW 1 cut(s) 1027
Bsc4I CCNNNNNNNGG 2 cut(s) 281, 1238
Bse118I RCCGGY 1 cut(s) 612
Bse1I ACTGG 5 cut(s) 375, 380, 649, 842, 965
BseAI TCCGGA 1 cut(s) 1027
BseBI CCWGG 2 cut(s) 870, 1233
BseDI CCNNGG 3 cut(s) 868, 1093, 1231
BseGI GGATG 6 cut(s) 13, 342, 645, 969, 1003, 1285
BseLI CCNNNNNNNGG 2 cut(s) 281, 1238
BseMII CTCAG 2 cut(s) 775, 840
BseNI ACTGG 5 cut(s) 375, 380, 649, 842, 965
BseSI GKGCMC 1 cut(s) 1051
BseXI GCAGC 3 cut(s) 291, 796, 961
BseYI CCCAGC 2 cut(s) 259, 300
BsgI GTGCAG 1 cut(s) 903
BshNI GGYRCC 1 cut(s) 597
BsiHKAI GWGCWC 1 cut(s) 1051
BsiSI CCGG 3 cut(s) 518, 613, 1028
BslFI GGGAC 2 cut(s) 225, 430
BslI CCNNNNNNNGG 2 cut(s) 281, 1238
BsmAI GTCTC 1 cut(s) 45
BsmBI CGTCTC 1 cut(s) 45
BsmFI GGGAC 2 cut(s) 225, 430
Bsp1286I GDGCHC 1 cut(s) 1051
Bsp13I TCCGGA 1 cut(s) 1027
Bsp1407I TGTACA 2 cut(s) 634, 854
Bsp143I GATC 5 cut(s) 10, 533, 810, 993, 1288
Bsp19I CCATGG 1 cut(s) 1093
BspACI CCGC 3 cut(s) 144, 594, 912
BspCNI CTCAG 2 cut(s) 774, 841
BspEI TCCGGA 1 cut(s) 1027
BspHI TCATGA 1 cut(s) 13
BspLI GGNNCC 4 cut(s) 286, 599, 866, 1222
BspPI GGATC 1 cut(s) 988
BspT107I GGYRCC 1 cut(s) 597
BsrFI RCCGGY 1 cut(s) 612
BsrGI TGTACA 2 cut(s) 634, 854
BsrI ACTGG 5 cut(s) 375, 380, 649, 842, 965
BssAI RCCGGY 1 cut(s) 612
BssECI CCNNGG 3 cut(s) 868, 1093, 1231
BssMI GATC 5 cut(s) 10, 533, 810, 993, 1288
BssT1I CCWWGG 1 cut(s) 1093
Bst2UI CCWGG 2 cut(s) 870, 1233
Bst4CI ACNGT 3 cut(s) 602, 1012, 1053
BstAPI GCANNNNNTGC 1 cut(s) 1166
BstAUI TGTACA 2 cut(s) 634, 854
BstBAI YACGTR 2 cut(s) 1155, 1166
BstC8I GCNNGC 2 cut(s) 1131, 1135
BstDEI CTNAG 3 cut(s) 761, 849, 1237
BstDSI CCRYGG 1 cut(s) 1093
BstF5I GGATG 6 cut(s) 13, 342, 645, 969, 1003, 1285
BstKTI GATC 5 cut(s) 13, 536, 813, 996, 1291
BstMAI GTCTC 1 cut(s) 45
BstMBI GATC 5 cut(s) 10, 533, 810, 993, 1288
BstMWI GCNNNNNNNGC 1 cut(s) 1166
BstNI CCWGG 2 cut(s) 870, 1233
BstNSI RCATGY 3 cut(s) 861, 981, 1133
BstSCI CCNGG 2 cut(s) 868, 1231
BstSFI CTRYAG 1 cut(s) 78
BstSLI GKGCMC 1 cut(s) 1051
BstSNI TACGTA 1 cut(s) 1155
BstV1I GCAGC 3 cut(s) 291, 796, 961
BstV2I GAAGAC 1 cut(s) 1250
BstX2I RGATCY 1 cut(s) 1288
BstYI RGATCY 1 cut(s) 1288
BtgI CCRYGG 1 cut(s) 1093
BtsCI GGATG 6 cut(s) 13, 342, 645, 969, 1003, 1285
BtsIMutI CAGTG 2 cut(s) 656, 1049
Cac8I GCNNGC 2 cut(s) 1131, 1135
CciI TCATGA 1 cut(s) 13
Cfr10I RCCGGY 1 cut(s) 612
Cfr13I GGNCC 2 cut(s) 285, 1221
Csp6I GTAC 5 cut(s) 368, 598, 635, 855, 1295
CspCI CAANNNNNGTGG 2 cut(s) 664, 699
CviAII CATG 7 cut(s) 14, 223, 788, 858, 978, 1094, 1130
CviQI GTAC 5 cut(s) 368, 598, 635, 855, 1295
DdeI CTNAG 3 cut(s) 761, 849, 1237
DpnI GATC 5 cut(s) 12, 535, 812, 995, 1290
DpnII GATC 5 cut(s) 10, 533, 810, 993, 1288
DraI TTTAAA 1 cut(s) 624
DraIII CACNNNGTG 1 cut(s) 1166
Eco105I TACGTA 1 cut(s) 1155
Eco130I CCWWGG 1 cut(s) 1093
Eco32I GATATC 1 cut(s) 203
Eco47I GGWCC 2 cut(s) 285, 1221
Eco72I CACGTG 1 cut(s) 1166
EcoO109I RGGNCCY 1 cut(s) 285
EcoRII CCWGG 2 cut(s) 868, 1231
EcoRV GATATC 1 cut(s) 203
EcoT14I CCWWGG 1 cut(s) 1093
ErhI CCWWGG 1 cut(s) 1093
Esp3I CGTCTC 1 cut(s) 45
FaeI CATG 7 cut(s) 17, 226, 791, 861, 981, 1097, 1133
FalI AAGNNNNNCTT 4 cut(s) 247, 279, 535, 567
FaqI GGGAC 2 cut(s) 225, 430
FatI CATG 7 cut(s) 13, 222, 787, 857, 977, 1093, 1129
FauI CCCGC 1 cut(s) 587
FbaI TGATCA 1 cut(s) 10
FblI GTMKAC 1 cut(s) 766
Fnu4HI GCNGC 4 cut(s) 144, 305, 785, 975
FokI GGATG 6 cut(s) 20, 349, 632, 976, 990, 1292
Fsp4HI GCNGC 4 cut(s) 144, 305, 785, 975
FspBI CTAG 3 cut(s) 276, 1202, 1265
GluI GCNGC 4 cut(s) 144, 305, 785, 975
GsaI CCCAGC 2 cut(s) 263, 304
GsuI CTGGAG 1 cut(s) 227
HapII CCGG 3 cut(s) 518, 613, 1028
Hin1II CATG 7 cut(s) 17, 226, 791, 861, 981, 1097, 1133
HincII GTYRAC 1 cut(s) 482
HindII GTYRAC 1 cut(s) 482
HinfI GANTC 6 cut(s) 185, 279, 829, 1031, 1089, 1189
HpaII CCGG 3 cut(s) 518, 613, 1028
Hpy166II GTNNAC 6 cut(s) 482, 528, 767, 855, 1049, 1152
Hpy188I TCNGA 5 cut(s) 560, 670, 1036, 1088, 1342
Hpy188III TCNNGA 9 cut(s) 14, 44, 206, 543, 814, 833, 1019, 1028, 1064
Hpy8I GTNNAC 6 cut(s) 482, 528, 767, 855, 1049, 1152
HpyAV CCTTC 2 cut(s) 11, 499
HpyCH4III ACNGT 3 cut(s) 602, 1012, 1053
HpyCH4IV ACGT 2 cut(s) 1154, 1165
HpyF10VI GCNNNNNNNGC 1 cut(s) 1166
HpyF3I CTNAG 3 cut(s) 761, 849, 1237
HpySE526I ACGT 2 cut(s) 1154, 1165
Hsp92II CATG 7 cut(s) 17, 226, 791, 861, 981, 1097, 1133
Kpn2I TCCGGA 1 cut(s) 1027
KpnI GGTACC 1 cut(s) 601
Ksp22I TGATCA 1 cut(s) 10
Kzo9I GATC 5 cut(s) 10, 533, 810, 993, 1288
Lsp1109I GCAGC 3 cut(s) 291, 796, 961
LweI GCATC 2 cut(s) 943, 1255
MaeI CTAG 3 cut(s) 276, 1202, 1265
MaeII ACGT 2 cut(s) 1154, 1165
MaeIII GTNAC 1 cut(s) 186
MalI GATC 5 cut(s) 12, 535, 812, 995, 1290
MboI GATC 5 cut(s) 10, 533, 810, 993, 1288
MboII GAAGA 4 cut(s) 185, 722, 1250, 1298
MfeI CAATTG 1 cut(s) 60
MflI RGATCY 1 cut(s) 1288
MhlI GDGCHC 1 cut(s) 1051
MlyI GAGTC 3 cut(s) 194, 288, 1083
MmeI TCCRAC 1 cut(s) 1031
MroI TCCGGA 1 cut(s) 1027
MroXI GAANNNNTTC 1 cut(s) 21
MseI TTAA 8 cut(s) 69, 102, 170, 248, 623, 744, 1272, 1363
MslI CAYNNNNRTG 1 cut(s) 1251
MspA1I CMGCKG 1 cut(s) 304
MspI CCGG 3 cut(s) 518, 613, 1028
MspR9I CCNGG 2 cut(s) 870, 1233
MunI CAATTG 1 cut(s) 60
MvaI CCWGG 2 cut(s) 870, 1233
MwoI GCNNNNNNNGC 1 cut(s) 1166
NcoI CCATGG 1 cut(s) 1093
NdeII GATC 5 cut(s) 10, 533, 810, 993, 1288
NlaIII CATG 7 cut(s) 17, 226, 791, 861, 981, 1097, 1133
NlaIV GGNNCC 4 cut(s) 286, 599, 866, 1222
NmuCI GTSAC 1 cut(s) 186
NspI RCATGY 3 cut(s) 861, 981, 1133
PaeI GCATGC 1 cut(s) 1133
PagI TCATGA 1 cut(s) 13
PciI ACATGT 1 cut(s) 857
PcsI WCGNNNNNNNCGW 1 cut(s) 288
PdmI GAANNNNTTC 1 cut(s) 21
PfeI GAWTC 3 cut(s) 829, 1031, 1189
PkrI GCNGC 4 cut(s) 145, 306, 786, 976
PleI GAGTC 3 cut(s) 193, 287, 1083
PmaCI CACGTG 1 cut(s) 1166
PmlI CACGTG 1 cut(s) 1166
PpsI GAGTC 3 cut(s) 193, 287, 1083
Ppu21I YACGTR 2 cut(s) 1155, 1166
PpuMI RGGWCCY 1 cut(s) 285
PscI ACATGT 1 cut(s) 857
PsiI TTATAA 1 cut(s) 399
Psp5II RGGWCCY 1 cut(s) 285
Psp6I CCWGG 2 cut(s) 868, 1231
PspCI CACGTG 1 cut(s) 1166
PspFI CCCAGC 2 cut(s) 259, 300
PspGI CCWGG 2 cut(s) 868, 1231
PspN4I GGNNCC 4 cut(s) 286, 599, 866, 1222
PspPI GGNCC 2 cut(s) 285, 1221
PspPPI RGGWCCY 1 cut(s) 285
PsuI RGATCY 1 cut(s) 1288
PvuII CAGCTG 1 cut(s) 304
RsaI GTAC 5 cut(s) 369, 599, 636, 856, 1296
RsaNI GTAC 5 cut(s) 368, 598, 635, 855, 1295
RseI CAYNNNNRTG 1 cut(s) 1251
SaqAI TTAA 8 cut(s) 69, 102, 170, 248, 623, 744, 1272, 1363
SatI GCNGC 4 cut(s) 144, 305, 785, 975
Sau3AI GATC 5 cut(s) 10, 533, 810, 993, 1288
Sau96I GGNCC 2 cut(s) 285, 1221
ScaI AGTACT 1 cut(s) 369
SchI GAGTC 3 cut(s) 194, 288, 1083
ScrFI CCNGG 2 cut(s) 870, 1233
SduI GDGCHC 1 cut(s) 1051
SfaNI GCATC 2 cut(s) 943, 1255
SfcI CTRYAG 1 cut(s) 78
SinI GGWCC 2 cut(s) 285, 1221
SmiMI CAYNNNNRTG 1 cut(s) 1251
SmlI CTYRAG 2 cut(s) 42, 814
SmoI CTYRAG 2 cut(s) 42, 814
SnaBI TACGTA 1 cut(s) 1155
SphI GCATGC 1 cut(s) 1133
SsiI CCGC 3 cut(s) 144, 594, 912
SspI AATATT 1 cut(s) 181
SspMI CTAG 3 cut(s) 276, 1202, 1265
StyD4I CCNGG 2 cut(s) 868, 1231
StyI CCWWGG 1 cut(s) 1093
TaaI ACNGT 3 cut(s) 602, 1012, 1053
TaiI ACGT 2 cut(s) 1157, 1168
TaqI TCGA 5 cut(s) 25, 455, 532, 948, 992
TatI WGTACW 3 cut(s) 367, 634, 854
TauI GCSGC 1 cut(s) 146
TfiI GAWTC 3 cut(s) 829, 1031, 1189
Tru1I TTAA 8 cut(s) 69, 102, 170, 248, 623, 744, 1272, 1363
Tru9I TTAA 8 cut(s) 69, 102, 170, 248, 623, 744, 1272, 1363
TscAI CASTG 2 cut(s) 656, 1056
TseFI GTSAC 1 cut(s) 186
TseI GCWGC 3 cut(s) 304, 784, 974
Tsp45I GTSAC 1 cut(s) 186
TspDTI ATGAA 3 cut(s) 30, 422, 804
TspGWI ACGGA 1 cut(s) 280
TspRI CASTG 2 cut(s) 656, 1056
VneI GTGCAC 1 cut(s) 1047
VpaK11BI GGWCC 2 cut(s) 285, 1221
XapI RAATTY 5 cut(s) 133, 418, 879, 940, 1172
XceI RCATGY 3 cut(s) 861, 981, 1133
XmiI GTMKAC 1 cut(s) 766
XmnI GAANNNNTTC 1 cut(s) 21
XspI CTAG 3 cut(s) 276, 1202, 1265
ZrmI AGTACT 1 cut(s) 369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.