Rh7AG492400

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000129
Physical Location & Seq
Forward (+)
69285578 .. 69287558
1981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG492400.1

Sequence Viewer

Length: 1650 bp
ATGAGTGCTATCTCCGTTATTGAGTCAGGTTTTGAAACTTCTAATTGCTTGTATCAATGCACACTGGAAACTGATCTTTTCTCTATGAAACCATCTGTCGTTGACGGGGAAGAAAAGCACCACTTCATTAGATCAAGTTCTCATCTGCTTTTCATTTCCTATTTAGCTAGTTTTCATTTTTCAAAGCAGTTGAATCAATCAACTGTGGTGGGGGCTAGGTTTGAAACCAACAACCCATTCATGGACGTCCAGGAATGTGGAATTCGTCTAGTCTATGAGCAAGATGATGGATGGTATACCAAACTGATCCCTGGTGATACTGGGACTTGTCTAAATGAAGTTTTAGACGCTATTCGAGAATCTGGCTGGATTAGTGAAGGGGATACGTGTTTGAAATGGGAGAAATTTATTCCACCCTTGGAACAAGACTCCAGAATTCTGCTGAGAAAGAATATCAAGTCTGTTCTTCCAAGATACCTTGAGGCGTTAACACATAATTCTGCAACGTATAGATTTAACCTCACTGGAAGCCCAGCATGGTTTGACTACTCATGTGGTCTTAACACTGATACAGGGCCATGGCCCTCTGTGTCAATCGAGATTCCTCAGAATCTACACAAGAGTAAGAAGTGGATGGGATTTGCAATATGTGCATCAATTGCAGAGGAACAGCAGCATATGACAGAAGAGGAGTATTGTGTTTACTTTCAATTCATAATGGGTGAATCTAATGAGGATATTCCCCGAGAACTCGAGTATGTCGTGGACATGTGGTCAGAAGAACATAATCGACTTTTGGTTGTTTACATACCGCGAGCAGAGTTTCCCGAAGATTTTATGCATCCATCACCAACTGTAATGAACATTTTCTTCGGAACCAATTGCCCTCATGTAGAGGTTCGAAGAAGTGGGATCCGTATTGTGTACCAGGAAGATTTCCAAGGCTTTGTTGAGACAATCATCCGGTGCATGCAAAGAGAAGATACCCTTGAGCTTTATGATAAATGGGTGGTAGAAGATTGGATAGACTTGATAGGATTGCAAGGTGGTCATTTATGTACTTCAAACAAACTTGATTCCATAACCCGACGAGCAAGAAAGTTTGAATTACTCTCTCAAAAATATAGAAATCAGGACTGGACTGCTCCTTCACTATTCTTTTGTGTATTCTATGGAACTGAAATTTCCAAGTGGAAATGGTTCATGCATTTCAACGAAGGCAACTCTGCAGAAATCCAACTGCCCCCGAATTTGTTTGATGATGCTAATTGGTTAGGCATTGCTGTATCTGCTTTTTTGTGGGTATCCCACGAAGATCCAAACATGATGCTTGGCACTCCTGATTCAGAGTTTAATGTGCTTAGTTGTTGTCTGGACTCTGATGTTTCTTGGGACAGCTTATTTGATGTCAAAATTCAGCATCTTGTGCCGAAACTCAAGCCGTCAGACTTTGCAATTGATTTGACTTTGTTTGTCTATATACCGCGCAATGGTAAATATTTTAAGTTCTGGAGGCAATGTAATCTGGCCAGGGTAACATTTTCGTCCCCTAGCCCATGCTTAGGACTGCATAGTTGTGCCCTTCGCCTAGTATTCAAGGAGGATGTTGAAGATCTTGTACAGACACTTACCCTCTGCGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

549

Amino Acids

63.5

Weight (kDa)

4.91

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 178 - 312 5.3e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 249
AccI GTMKAC 1 cut(s) 296
AccII CGCG 2 cut(s) 814, 1486
AciI CCGC 2 cut(s) 812, 1484
AclWI GGATC 4 cut(s) 301, 907, 920, 1310
AcoI YGGCCR 1 cut(s) 1527
AcsI RAATTY 6 cut(s) 261, 404, 435, 1182, 1249, 1413
AcyI GRCGYC 1 cut(s) 246
AfaI GTAC 3 cut(s) 926, 1060, 1620
AfiI CCNNNNNNNGG 3 cut(s) 241, 1490, 1562
AflIII ACRYGT 2 cut(s) 386, 768
AhdI GACNNNNNGTC 1 cut(s) 772
AjnI CCWGG 4 cut(s) 249, 310, 927, 1529
AjuI GAANNNNNNNTTGG 2 cut(s) 221, 253
AluBI AGCT 3 cut(s) 167, 994, 1398
AluI AGCT 3 cut(s) 167, 994, 1398
Alw26I GTCTC 1 cut(s) 947
AlwI GGATC 4 cut(s) 301, 907, 920, 1310
Ama87I CYCGRG 2 cut(s) 744, 752
AoxI GGCC 3 cut(s) 575, 581, 1527
ApeKI GCWGC 1 cut(s) 673
ApoI RAATTY 6 cut(s) 261, 404, 435, 1182, 1249, 1413
ArsI GACNNNNNNTTYG 2 cut(s) 1385, 1417
Asp700I GAANNNNTTC 2 cut(s) 866, 1199
AspLEI GCGC 1 cut(s) 1488
AspS9I GGNCC 2 cut(s) 575, 582
AsuHPI GGTGA 3 cut(s) 326, 734, 840
AsuII TTCGAA 1 cut(s) 901
AvaI CYCGRG 2 cut(s) 744, 752
BaeGI GKGCMC 1 cut(s) 1582
BalI TGGCCA 1 cut(s) 1529
BamHI GGATCC 1 cut(s) 912
BarI GAAGNNNNNNTAC 2 cut(s) 1602, 1634
BbvI GCAGC 1 cut(s) 685
BccI CCATC 5 cut(s) 100, 281, 285, 628, 853
BceAI ACGGC 1 cut(s) 1426
BciT130I CCWGG 4 cut(s) 251, 312, 929, 1531
BciVI GTATCC 2 cut(s) 376, 1315
BcoDI GTCTC 1 cut(s) 947
BfaI CTAG 5 cut(s) 168, 216, 269, 1551, 1589
BfmI CTRYAG 1 cut(s) 1227
BfuI GTATCC 2 cut(s) 376, 1315
BglII AGATCT 1 cut(s) 1612
BisI GCNGC 1 cut(s) 674
BlsI GCNGC 1 cut(s) 675
Bme1390I CCNGG 4 cut(s) 251, 312, 929, 1531
BmeRI GACNNNNNGTC 1 cut(s) 772
BmeT110I CYCGRG 2 cut(s) 744, 752
BmgT120I GGNCC 2 cut(s) 575, 582
BmiI GGNNCC 2 cut(s) 877, 914
BmrFI CCNGG 4 cut(s) 251, 312, 929, 1531
BmrI ACTGGG 1 cut(s) 330
BmsI GCATC 5 cut(s) 662, 850, 1252, 1317, 1429
BmuI ACTGGG 1 cut(s) 330
BpmI CTGGAG 2 cut(s) 415, 1531
Bpu10I CCTNAGC 1 cut(s) 1561
Bpu14I TTCGAA 1 cut(s) 901
BpuEI CTTGAG 3 cut(s) 500, 1010, 1421
BsaAI YACGTR 1 cut(s) 387
BsaHI GRCGYC 1 cut(s) 246
BsaJI CCNNGG 5 cut(s) 310, 417, 578, 940, 1530
BsaWI WCCGGW 1 cut(s) 963
BsaXI ACNNNNNCTCC 2 cut(s) 1504, 1534
Bsc4I CCNNNNNNNGG 3 cut(s) 241, 1490, 1562
Bse1I ACTGG 4 cut(s) 69, 325, 529, 1142
Bse3DI GCAATG 3 cut(s) 1278, 1495, 1523
BseBI CCWGG 4 cut(s) 251, 312, 929, 1531
BseDI CCNNGG 5 cut(s) 310, 417, 578, 940, 1530
BseGI GGATG 5 cut(s) 296, 639, 841, 960, 1609
BseLI CCNNNNNNNGG 3 cut(s) 241, 1490, 1562
BseMI GCAATG 3 cut(s) 1278, 1495, 1523
BseMII CTCAG 2 cut(s) 434, 620
BseNI ACTGG 4 cut(s) 69, 325, 529, 1142
BseRI GAGGAG 1 cut(s) 704
BseSI GKGCMC 1 cut(s) 1582
BseXI GCAGC 1 cut(s) 685
BseYI CCCAGC 1 cut(s) 532
Bsh1236I CGCG 2 cut(s) 814, 1486
BshFI GGCC 3 cut(s) 577, 583, 1529
BsiHKCI CYCGRG 2 cut(s) 744, 752
BsiSI CCGG 1 cut(s) 964
BslFI GGGAC 3 cut(s) 337, 1406, 1531
BslI CCNNNNNNNGG 3 cut(s) 241, 1490, 1562
BsmAI GTCTC 1 cut(s) 947
BsmFI GGGAC 3 cut(s) 337, 1406, 1531
BsnI GGCC 3 cut(s) 577, 583, 1529
BsoBI CYCGRG 2 cut(s) 744, 752
Bsp119I TTCGAA 1 cut(s) 901
Bsp1286I GDGCHC 1 cut(s) 1582
Bsp1407I TGTACA 1 cut(s) 1618
Bsp143I GATC 6 cut(s) 73, 131, 306, 912, 1315, 1612
Bsp19I CCATGG 1 cut(s) 578
BspACI CCGC 2 cut(s) 812, 1484
BspANI GGCC 3 cut(s) 577, 583, 1529
BspCNI CTCAG 2 cut(s) 435, 619
BspFNI CGCG 2 cut(s) 814, 1486
BspLI GGNNCC 2 cut(s) 877, 914
BspMAI CTGCAG 1 cut(s) 1231
BspPI GGATC 4 cut(s) 301, 907, 920, 1310
BspT104I TTCGAA 1 cut(s) 901
BsrDI GCAATG 3 cut(s) 1278, 1495, 1523
BsrGI TGTACA 1 cut(s) 1618
BsrI ACTGG 4 cut(s) 69, 325, 529, 1142
BssECI CCNNGG 5 cut(s) 310, 417, 578, 940, 1530
BssMI GATC 6 cut(s) 73, 131, 306, 912, 1315, 1612
BssNAI GTATAC 1 cut(s) 297
BssNI GRCGYC 1 cut(s) 246
BssT1I CCWWGG 3 cut(s) 417, 578, 940
Bst1107I GTATAC 1 cut(s) 297
Bst2UI CCWGG 4 cut(s) 251, 312, 929, 1531
Bst4CI ACNGT 2 cut(s) 205, 856
Bst6I CTCTTC 1 cut(s) 681
BstACI GRCGYC 1 cut(s) 246
BstAPI GCANNNNNTGC 3 cut(s) 650, 659, 1426
BstAUI TGTACA 1 cut(s) 1618
BstBAI YACGTR 1 cut(s) 387
BstBI TTCGAA 1 cut(s) 901
BstC8I GCNNGC 2 cut(s) 816, 971
BstDEI CTNAG 4 cut(s) 443, 606, 1361, 1561
BstDSI CCRYGG 1 cut(s) 578
BstF5I GGATG 5 cut(s) 296, 639, 841, 960, 1609
BstFNI CGCG 2 cut(s) 814, 1486
BstHHI GCGC 1 cut(s) 1488
BstKTI GATC 6 cut(s) 76, 134, 309, 915, 1318, 1615
BstMAI GTCTC 1 cut(s) 947
BstMBI GATC 6 cut(s) 73, 131, 306, 912, 1315, 1612
BstMWI GCNNNNNNNGC 4 cut(s) 650, 659, 1289, 1426
BstNI CCWGG 4 cut(s) 251, 312, 929, 1531
BstNSI RCATGY 2 cut(s) 772, 973
BstSCI CCNGG 4 cut(s) 249, 310, 927, 1529
BstSFI CTRYAG 1 cut(s) 1227
BstSLI GKGCMC 1 cut(s) 1582
BstUI CGCG 2 cut(s) 814, 1486
BstV1I GCAGC 1 cut(s) 685
BstX2I RGATCY 3 cut(s) 912, 1315, 1612
BstXI CCANNNNNNTGG 1 cut(s) 257
BstYI RGATCY 3 cut(s) 912, 1315, 1612
BstZ17I GTATAC 1 cut(s) 297
BsuI GTATCC 2 cut(s) 376, 1315
BsuRI GGCC 3 cut(s) 577, 583, 1529
BtgI CCRYGG 1 cut(s) 578
BtsCI GGATG 5 cut(s) 296, 639, 841, 960, 1609
BtsIMutI CAGTG 3 cut(s) 62, 522, 564
Cac8I GCNNGC 2 cut(s) 816, 971
CfoI GCGC 1 cut(s) 1488
Cfr13I GGNCC 2 cut(s) 575, 582
CseI GACGC 1 cut(s) 356
Csp6I GTAC 3 cut(s) 925, 1059, 1619
CspCI CAANNNNNGTGG 2 cut(s) 189, 224
CviQI GTAC 3 cut(s) 925, 1059, 1619
DdeI CTNAG 4 cut(s) 443, 606, 1361, 1561
DpnI GATC 6 cut(s) 75, 133, 308, 914, 1317, 1614
DpnII GATC 6 cut(s) 73, 131, 306, 912, 1315, 1612
DriI GACNNNNNGTC 1 cut(s) 772
EaeI YGGCCR 1 cut(s) 1527
Eam1104I CTCTTC 1 cut(s) 681
Eam1105I GACNNNNNGTC 1 cut(s) 772
EarI CTCTTC 1 cut(s) 681
Eco130I CCWWGG 3 cut(s) 417, 578, 940
Eco88I CYCGRG 2 cut(s) 744, 752
EcoRI GAATTC 2 cut(s) 261, 435
EcoRII CCWGG 4 cut(s) 249, 310, 927, 1529
EcoT14I CCWWGG 3 cut(s) 417, 578, 940
EcoT22I ATGCAT 2 cut(s) 843, 1209
ErhI CCWWGG 3 cut(s) 417, 578, 940
FalI AAGNNNNNCTT 4 cut(s) 107, 139, 972, 1004
FaqI GGGAC 3 cut(s) 337, 1406, 1531
FauNDI CATATG 1 cut(s) 678
FblI GTMKAC 1 cut(s) 296
Fnu4HI GCNGC 1 cut(s) 674
FokI GGATG 5 cut(s) 303, 646, 828, 947, 1616
Fsp4HI GCNGC 1 cut(s) 674
FspBI CTAG 5 cut(s) 168, 216, 269, 1551, 1589
GlaI GCGC 1 cut(s) 1487
GluI GCNGC 1 cut(s) 674
GsaI CCCAGC 1 cut(s) 536
GsuI CTGGAG 2 cut(s) 415, 1531
HaeIII GGCC 3 cut(s) 577, 583, 1529
HapII CCGG 1 cut(s) 964
HgaI GACGC 1 cut(s) 356
HhaI GCGC 1 cut(s) 1488
Hin1I GRCGYC 1 cut(s) 246
Hin6I GCGC 1 cut(s) 1486
HinP1I GCGC 1 cut(s) 1486
HincII GTYRAC 2 cut(s) 103, 489
HindII GTYRAC 2 cut(s) 103, 489
HpaI GTTAAC 1 cut(s) 489
HpaII CCGG 1 cut(s) 964
HphI GGTGA 3 cut(s) 326, 734, 840
Hpy166II GTNNAC 7 cut(s) 103, 297, 489, 703, 766, 805, 925
Hpy188I TCNGA 6 cut(s) 609, 778, 875, 1348, 1381, 1447
Hpy188III TCNNGA 8 cut(s) 356, 432, 598, 827, 1133, 1340, 1373, 1510
Hpy8I GTNNAC 7 cut(s) 103, 297, 489, 703, 766, 805, 925
Hpy99I CGWCG 1 cut(s) 1092
HpyAV CCTTC 4 cut(s) 371, 1158, 1211, 1592
HpyCH4III ACNGT 2 cut(s) 205, 856
HpyCH4IV ACGT 3 cut(s) 246, 386, 506
HpyF10VI GCNNNNNNNGC 4 cut(s) 650, 659, 1289, 1426
HpyF3I CTNAG 4 cut(s) 443, 606, 1361, 1561
HpySE526I ACGT 3 cut(s) 246, 386, 506
Hsp92I GRCGYC 1 cut(s) 246
HspAI GCGC 1 cut(s) 1486
KspAI GTTAAC 1 cut(s) 489
Kzo9I GATC 6 cut(s) 73, 131, 306, 912, 1315, 1612
LmnI GCTCC 1 cut(s) 1150
Lsp1109I GCAGC 1 cut(s) 685
LweI GCATC 5 cut(s) 662, 850, 1252, 1317, 1429
MaeI CTAG 5 cut(s) 168, 216, 269, 1551, 1589
MaeII ACGT 3 cut(s) 246, 386, 506
MaeIII GTNAC 1 cut(s) 1534
MalI GATC 6 cut(s) 75, 133, 308, 914, 1317, 1614
MboI GATC 6 cut(s) 73, 131, 306, 912, 1315, 1612
MfeI CAATTG 3 cut(s) 657, 880, 1455
MflI RGATCY 3 cut(s) 912, 1315, 1612
MhlI GDGCHC 1 cut(s) 1582
MlsI TGGCCA 1 cut(s) 1529
MluNI TGGCCA 1 cut(s) 1529
MlyI GAGTC 3 cut(s) 32, 422, 1370
MmeI TCCRAC 1 cut(s) 1261
Mox20I TGGCCA 1 cut(s) 1529
Mph1103I ATGCAT 2 cut(s) 843, 1209
MroXI GAANNNNTTC 2 cut(s) 866, 1199
MscI TGGCCA 1 cut(s) 1529
MseI TTAA 5 cut(s) 488, 516, 561, 1353, 1503
MslI CAYNNNNRTG 1 cut(s) 1575
Msp20I TGGCCA 1 cut(s) 1529
MspI CCGG 1 cut(s) 964
MspR9I CCNGG 4 cut(s) 251, 312, 929, 1531
MunI CAATTG 3 cut(s) 657, 880, 1455
MvaI CCWGG 4 cut(s) 251, 312, 929, 1531
MvnI CGCG 2 cut(s) 814, 1486
MwoI GCNNNNNNNGC 4 cut(s) 650, 659, 1289, 1426
NcoI CCATGG 1 cut(s) 578
NdeI CATATG 1 cut(s) 678
NdeII GATC 6 cut(s) 73, 131, 306, 912, 1315, 1612
NlaIV GGNNCC 2 cut(s) 877, 914
NsiI ATGCAT 2 cut(s) 843, 1209
NspI RCATGY 2 cut(s) 772, 973
NspV TTCGAA 1 cut(s) 901
PaeI GCATGC 1 cut(s) 973
PaeR7I CTCGAG 1 cut(s) 752
PciI ACATGT 1 cut(s) 768
PcsI WCGNNNNNNNCGW 1 cut(s) 759
PdmI GAANNNNTTC 2 cut(s) 866, 1199
PfeI GAWTC 7 cut(s) 193, 359, 601, 610, 725, 1076, 1343
PfoI TCCNGGA 1 cut(s) 249
PkrI GCNGC 1 cut(s) 675
PleI GAGTC 3 cut(s) 31, 422, 1370
PpsI GAGTC 3 cut(s) 31, 422, 1370
Ppu21I YACGTR 1 cut(s) 387
PscI ACATGT 1 cut(s) 768
Psp6I CCWGG 4 cut(s) 249, 310, 927, 1529
PspFI CCCAGC 1 cut(s) 532
PspGI CCWGG 4 cut(s) 249, 310, 927, 1529
PspN4I GGNNCC 2 cut(s) 877, 914
PspPI GGNCC 2 cut(s) 575, 582
PspXI VCTCGAGB 1 cut(s) 752
PstI CTGCAG 1 cut(s) 1231
PsuI RGATCY 3 cut(s) 912, 1315, 1612
RsaI GTAC 3 cut(s) 926, 1060, 1620
RsaNI GTAC 3 cut(s) 925, 1059, 1619
RseI CAYNNNNRTG 1 cut(s) 1575
SaqAI TTAA 5 cut(s) 488, 516, 561, 1353, 1503
SatI GCNGC 1 cut(s) 674
Sau3AI GATC 6 cut(s) 73, 131, 306, 912, 1315, 1612
Sau96I GGNCC 2 cut(s) 575, 582
SchI GAGTC 3 cut(s) 32, 422, 1370
ScrFI CCNGG 4 cut(s) 251, 312, 929, 1531
SduI GDGCHC 1 cut(s) 1582
SfaNI GCATC 5 cut(s) 662, 850, 1252, 1317, 1429
SfcI CTRYAG 1 cut(s) 1227
Sfr274I CTCGAG 1 cut(s) 752
SfuI TTCGAA 1 cut(s) 901
SlaI CTCGAG 1 cut(s) 752
SmiMI CAYNNNNRTG 1 cut(s) 1575
SmlI CTYRAG 4 cut(s) 479, 752, 989, 1436
SmoI CTYRAG 4 cut(s) 479, 752, 989, 1436
SphI GCATGC 1 cut(s) 973
SsiI CCGC 2 cut(s) 812, 1484
SspI AATATT 1 cut(s) 1499
SspMI CTAG 5 cut(s) 168, 216, 269, 1551, 1589
StyD4I CCNGG 4 cut(s) 249, 310, 927, 1529
StyI CCWWGG 3 cut(s) 417, 578, 940
TaaI ACNGT 2 cut(s) 205, 856
TaiI ACGT 3 cut(s) 249, 389, 509
TaqI TCGA 5 cut(s) 355, 597, 753, 790, 901
TatI WGTACW 2 cut(s) 1058, 1618
TfiI GAWTC 7 cut(s) 193, 359, 601, 610, 725, 1076, 1343
Tru1I TTAA 5 cut(s) 488, 516, 561, 1353, 1503
Tru9I TTAA 5 cut(s) 488, 516, 561, 1353, 1503
TscAI CASTG 3 cut(s) 69, 529, 571
TseI GCWGC 1 cut(s) 673
TspDTI ATGAA 9 cut(s) 101, 115, 142, 164, 229, 351, 703, 875, 1192
TspGWI ACGGA 2 cut(s) 4, 905
TspRI CASTG 3 cut(s) 69, 529, 571
XapI RAATTY 6 cut(s) 261, 404, 435, 1182, 1249, 1413
XceI RCATGY 2 cut(s) 772, 973
XhoI CTCGAG 1 cut(s) 752
XmiI GTMKAC 1 cut(s) 296
XmnI GAANNNNTTC 2 cut(s) 866, 1199
XspI CTAG 5 cut(s) 168, 216, 269, 1551, 1589
ZraI GACGTC 1 cut(s) 247
Zsp2I ATGCAT 2 cut(s) 843, 1209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.