RLG00000007791

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
21145400 .. 21151193
5794 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007791

Sequence Viewer

Length: 4440 bp
ATGACTACCATAGTAGATCTTCCTTCTTCTTCTTCTTCTTGTCCTCCTCCTCCTCCATTTCGTAAGCTGACATATGATGTGTTCCTCAGTTTCAGAGGTACAGATACCCGCACAAATTTCACAGATCATCTTTATGCCGCTCTCAAACAGAAAGGCATATACACATTCAGAGATGATGCAGAACTTAACAGAGGGGAATCAATTCGTCCAAATCTCTTGGAAGCAATTCAAGAGTCAAGATATGTAATTGTGGTGTTTTCTCAGAACTACGCCGATTCTTCGTGGTGTTTGGATGAGCTTGCAAAAGTAGCTGAATGCAGGAGAGCCATGGGACAAACAGTCCTTCCAGTGTTCTACCATGTTGATCCATCTGATGTACGAAGACAAACTGGAGAGCACCTTGGGAAAGCATTTGAGAAGCATCAAGAGCGGTTTGGAGGCAATCCAGACAAATTGCAGAGGTGGAAAGACGCTCTTGCTGAAGTAGGCAATCTCTCTGGATGGCATCTGAAAGATGGGTACGAATCCAAAGTCATTCACGAAATTGTTGAAAAGATTTTCACCGAGTTAAATCAAATAATCACAATATCTGAGGGTTTAGTTGGGATGGATTCTCACCTGAATGAAATGCTTTCGTACTTGGAGATTGGGTGTCCTGATGTTCGTATCATAGGGATTTGTGGTATGGGTGGTATCGGTAAGACAACTATTGCACAAGTGGTTTTTGAAAGGGTACAGGCTCAGTTTGAAGGTTGCAGCTTTCTTGAGAATGTTAGAGAGGCAACTGAAAAGCAAGGTGCAGTTCATTTACAAGAGCAACTTCTTTCGAATTTGCTGAAATGTAGTGTAAATGTACAGAACACTAGAATGGGAAAAAGTATAATGAGGCAGAGATTACATACTAAAATGGCTCTTATCATTCTTGATGATGTGGACCAAGAAGAACAATTGGAAGCATTGTGTGATAGGGAATCGTTTGGTCCAGGGAGTAGAATCATCATAACTTCTAGAGATGAACATTTGCTCAGTGCAGTTGAAGGAGATAAAGTATATAAGGTGAATCCATTAACTGATGCTGAAGCTCTTGAGTTCTTCCATATGAAAGCCTTTAAGAAAGACCAGCTGGTTGGGGAAGATTTTCTCGAGCTATCCAAGGAATTTTTGAAATATGCTAATGGCCTTCCATTAGCTATTAAAGTTTTGGGTTCCTCTGTTCGTGGTAAAAATGTAAAATTATGGTCTAGTGCATTGGATAGACTAAAAACCAATCCTCAAAAAAAAATTATCAATGTTCTTAAAGTTAGTTTTGATGGATTAGAAGAAACTGAAAAGGAAATCTTTTTGGACATTGCATGTTTCTTTAGAGGAGGGAACATAGATCATGTCGCAAGAATACTACAAGGTAGTGACCACTGTCCAGACATTGATATAGAAGTTCTCGTAAAGAAATCTTTGGTGACTTTGTTTGGAAGAAAATTGGGGATGCATGACTTGGTACTAGAATTGGGTCGGGAAATTGTTCGTCAAGAATGCCGTGAAGAGCCTGGAAAACGTAGCAGGCTGTGGCTTCCCAAAGAAATCATCCATGTACTTGGTCGGAGTAAGGCAAAGAGTGCAGTTCAAAGCATATTCCTCCAATGTCCAACAGAAGATGATGTTGGATGGAGCATGCTACGGCTTATAGATCTGAGTGGTTCCAAATACTTGATGTCGACTCCAGACTTCACGGAGGTTCCTGATCTTGAAAAGTTGGTGCTTCAAGATTGCACATGCTTGGTGGAGATTCACCCGTCTCTTGGATTTCTGAAGAAACTCATCTCTTTGAATATGAGAAATTGCGAGTCTATTAAGAGCATTCCACCTTTCACTACCTTGGAATCCCTTCAAAAATTGAAGCTTTCATTCTGTTCAGGACTGAAGAAGTTTCCAGAAATTGAAGGAAATATGAAAAGCTTGCTGAAGCTTCATTTGGATGGGACCAGCATTGAGGAATTGCCTCCATCAATTGAACACTTGACTGGTCTAACCATGTTGGATCTGACAGAGTGTGAAAACCTTTTGCATCTTCCCAATACCATTGGGTGCTTGACATCTTTGAAAAGTCTCTATCTAACAGGTTGCTCCAAACTTGATGAGATACCCGAGAATCTGAATGGTATTAAAGGTCTGGAGAAGCTTTTCATTGGTGGAACTTCCACAAGGGAGTTATCTTTCATTCTAGGCATGGAGAATCTACAGTATCTATCCTGCCGAGGATGTAAATATCTAGCTTCAGAACCATGCAAACAGCTAGCTTCATTATCGAGTTTGATAGAGCTAGACTTGAGTTATTGCGATCTGATGGATGGAGAAATTCTCAATGATTTTAGCAGCCTAATATCCTTAAGAAAGTTAGATTTAAGTGGTAATTACTTTGTACGATTACCTGAAAGTATCTTTCAACTCCCAAAGCTCAAGTCACTGTACTTGAGTAACAGACAGCTTCAGTTGCTGCCCAGTAAGATTCCGTCATGTCGTGTAGGCGTGTATTCAGAACATTGTCAAATCAAATTATTGAATTCATCGGAAGTTGATCATACAAGTCCAGCGCATCATAGAAAAGAAATACCTTTCCGGTCAAATCTCTTTACCGTACGTCCTAGAGATGAAATTCCAGAGTGTTTCAGCACTATATCTCCAAGAAATTCCATATTAATCCAGATACCTCAAAATCTGGCCGATGATAACAAGTTAAACAAGTGGAAGGGATTTGCGGCGTGTGCTATATTCTCAGTCAAGGGGCATACTGCTCTCTCCCTTATTGAACCGGATCCTGATTTTTCTAATTACTCATATCAAATCACATTGGAAACTGATGCTGTGCGTCCGGAACAATATGTTTTGAGAAAGGATTCAGCAAATTTAGGCTGCTATGGATCATGTTCTCATCTGCTCATGATGTTCTATATATCCGGTTTGAAGTTTCCACAGCGGCTGTTAAATAAATCAACTGTGGTGAGTGCTATGTTTGAAACCACCAATCCATCCATGTTGGTCCAGAAATGTGGAATTCGTCTAGTCTATGAGCAAGATGCTGGATGGTTAAATCAATCAACTGTGGATGATAATTCGATTTGTCTGAATTCTTCAATTTGTCTGAATAGAGCCGTATTGGAGTTTCGTTGGCTTGGTCAATCTTTGGAATGGGAGAACTTCATTCCACCCTTGGAAGAAGAATCCACACTTGTGCTGAGAAAGAACCTTGAGTCTGTTCTTCCAAGATACCTTGAGGCACTAAACCGTTATTCTGCAACGTATGAATTTAACCTCAGTGGAAGCCCAGGGTGGTTTCGCTCGTTTGTCCCTGATACAAGGTCAAATAAGACCGGAGTGTCAATCAAGCTGCCTCAAAATCTACACAAGAGCAAGAAGTGGATGGGATTTGCAATATACGTATCACTTGTAGAGGAAGTGGGGCACACAATGAGAGAGGAAAAATATCGGGTATATGTTACACTGAAAACTGGAGATGAATCTCGTAAGCGTATGTCCCGAGAACTTAAGCACGTCAGGCCAATTTCAGAAGAACATCATCAACTACTGGTTATTTACATACCGTGGGCACAGATTCCCGAAGCGTTGTTCACTGAGACATTAACAACTGCAATGGACTTTTACATACAGATCAGTGAAAGCCCTCATGTAAAGGCTCAAAGATTTGGATTCCGTATTGTGTACCAGGAAGATATACAAGAGTTTGCTGATACAATTATCCGGTGCATGCAGAGGGAAGATTCTCTTGAATTTCATGATAAGTTGGTGGTAGAAAAATGGATACAGTTGATGAGATTGCAAGGTGCCCATTTAGAGAGAGTGACAGATTGGGATTCCAGAACCCCACGGGAAAAACAATTCGAGTTGCAATCACAAAAATATAGAAATTGGGACTGGTCTGACCCTCGTCTTGCTTGTTGTGTCTTCAAGAGAGTTGATATCTCCAAGTTGAAATGGTTCATGCCTTCCATTAACCAAGGCAACTCCGCAGAAATCCAATTGCCTCTGAATGTGTTTGATGATGATAATTGGTTGGGGTTTGCCGTATGTTTTCCGTTGTCCCCCGACCAATATCCAAACATTAGTCATGGCAGTACCAGTTTTGATTCAGAGGATGTTGTGCTTAATTATCGTCTGGACTCTGATGTTGCTTGGCACGGCTTATTTGATTTCATGATGCATGGACATATTAAGATGCTCGAGCCATCTGAATGCTATGCGACCCATTTCCTTTATATACCGCGCACTAAAGTTCTTAGTAAGATGTGGAGGCAATGCAAATTGGCCAGGATAACTATGTGGTTCTCTAGCACATGCTTAGCAGTGCATAGTTGTGCCCTTCGTCTACTATTTAAAGAGGACGTTGAACATCTTGTAGAAACACTGACCCTCGCTGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1480

Amino Acids

168.81

Weight (kDa)

6.08

Isoelectric Point (pI)

44.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 25 - 196 5.5e-55 TIR domain
TIR_2 PF13676 27 - 123 6.6e-16 TIR domain
NB-ARC PF00931 219 - 373 3.1e-23 NB-ARC domain
NACHT PF05729 224 - 370 4e-06 NACHT domain
WHD_ROQ1 PF23282 440 - 509 3e-17 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 607 - 748 1.9e-10 Leucine-rich repeat region
LRR_13 PF23286 625 - 712 6e-11 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 763 - 835 1.3e-06 Leucine-rich repeat region
C-JID PF20160 880 - 1025 2.1e-07 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 3370
AccB1I GGYRCC 1 cut(s) 3836
AccBSI CCGCTC 2 cut(s) 140, 430
AccI GTMKAC 2 cut(s) 1712, 4378
AccII CGCG 1 cut(s) 4276
AccIII TCCGGA 1 cut(s) 2866
AciI CCGC 7 cut(s) 109, 138, 430, 2753, 2971, 4020, 4274
AclWI GGATC 5 cut(s) 359, 2043, 2804, 2817, 2923
AcoI YGGCCR 2 cut(s) 2715, 4317
AcuI CTGAAG 7 cut(s) 501, 1098, 1826, 1937, 1979, 2256, 2468
AfiI CCNNNNNNNGG 1 cut(s) 1796
AflII CTTAAG 2 cut(s) 2383, 3539
AhdI GACNNNNNGTC 1 cut(s) 338
AjiI CACGTC 1 cut(s) 3547
AjnI CCWGG 5 cut(s) 982, 1543, 3319, 3717, 4319
AjuI GAANNNNNNNTTGG 4 cut(s) 1641, 1673, 1952, 1984
AleI CACNNNNGTG 1 cut(s) 3224
Alw21I GWGCWC 1 cut(s) 399
Alw26I GTCTC 3 cut(s) 1797, 2108, 3623
AlwI GGATC 5 cut(s) 359, 2043, 2804, 2817, 2923
AlwNI CAGNNNCTG 2 cut(s) 2491, 2974
Ama87I CYCGRG 4 cut(s) 1142, 2141, 3531, 4232
Aor13HI TCCGGA 1 cut(s) 2866
AoxI GGCC 4 cut(s) 1177, 2715, 3551, 4317
ApeKI GCWGC 5 cut(s) 756, 2370, 2491, 2907, 3382
ArsI GACNNNNNNTTYG 4 cut(s) 516, 548, 2441, 2473
AseI ATTAAT 1 cut(s) 2693
Asp700I GAANNNNTTC 8 cut(s) 201, 225, 1137, 1518, 1881, 2177, 2890, 3989
AspLEI GCGC 2 cut(s) 2590, 4278
AspS9I GGNCC 4 cut(s) 934, 980, 1977, 3034
AsuHPI GGTGA 6 cut(s) 553, 608, 1069, 1468, 1778, 3007
AsuII TTCGAA 1 cut(s) 827
AsuNHI GCTAGC 1 cut(s) 2290
AvaI CYCGRG 4 cut(s) 1142, 2141, 3531, 4232
AvaII GGWCC 4 cut(s) 934, 980, 1977, 3034
BaeGI GKGCMC 4 cut(s) 3459, 3604, 3841, 4372
BalI TGGCCA 1 cut(s) 4319
BamHI GGATCC 1 cut(s) 2809
BanI GGYRCC 1 cut(s) 3836
BbsI GAAGAC 2 cut(s) 388, 3949
Bbv12I GWGCWC 1 cut(s) 399
BbvI GCAGC 5 cut(s) 768, 2382, 2478, 2894, 3369
BceAI ACGGC 5 cut(s) 1518, 1691, 3131, 4061, 4207
BciT130I CCWGG 5 cut(s) 984, 1545, 3321, 3719, 4321
BciVI GTATCC 1 cut(s) 3807
BclI TGATCA 1 cut(s) 2572
BcoDI GTCTC 3 cut(s) 1797, 2108, 3623
BfmI CTRYAG 1 cut(s) 2234
BfrI CTTAAG 2 cut(s) 2383, 3539
BfuI GTATCC 1 cut(s) 3807
BglII AGATCT 2 cut(s) 16, 1684
BisI GCNGC 8 cut(s) 138, 757, 2371, 2492, 2754, 2908, 2972, 3383
BlpI GCTNAGC 1 cut(s) 4351
BlsI GCNGC 8 cut(s) 139, 758, 2372, 2493, 2755, 2909, 2973, 3384
Bme1390I CCNGG 5 cut(s) 984, 1545, 3321, 3719, 4321
Bme18I GGWCC 4 cut(s) 934, 980, 1977, 3034
BmeRI GACNNNNNGTC 1 cut(s) 338
BmeT110I CYCGRG 4 cut(s) 1142, 2141, 3531, 4232
BmgBI CACGTC 1 cut(s) 3547
BmgT120I GGNCC 4 cut(s) 934, 980, 1977, 3034
BmiI GGNNCC 6 cut(s) 1207, 1696, 1734, 1978, 2811, 3838
BmrFI CCNGG 5 cut(s) 984, 1545, 3321, 3719, 4321
BmrI ACTGGG 1 cut(s) 2490
BmtI GCTAGC 1 cut(s) 2294
BmuI ACTGGG 1 cut(s) 2490
BoxI GACNNNNGTC 2 cut(s) 1413, 3939
BpiI GAAGAC 2 cut(s) 388, 3949
BplI GAGNNNNNCTC 2 cut(s) 2340, 2372
BpmI CTGGAG 4 cut(s) 411, 1701, 2189, 3525
Bpu1102I GCTNAGC 1 cut(s) 4351
Bpu14I TTCGAA 1 cut(s) 827
BpuEI CTTGAG 7 cut(s) 785, 1106, 2344, 2438, 2488, 3263, 3287
BsaAI YACGTR 1 cut(s) 3433
BsaWI WCCGGW 6 cut(s) 2613, 2806, 2866, 2951, 3365, 3753
BsaXI ACNNNNNCTCC 6 cut(s) 635, 665, 1032, 1062, 2659, 2689
Bsc4I CCNNNNNNNGG 1 cut(s) 1796
Bse1I ACTGG 8 cut(s) 347, 394, 2023, 2496, 3508, 3585, 3932, 4131
Bse3DI GCAATG 3 cut(s) 1347, 3651, 4313
BseAI TCCGGA 1 cut(s) 2866
BseBI CCWGG 5 cut(s) 984, 1545, 3321, 3719, 4321
BseLI CCNNNNNNNGG 1 cut(s) 1796
BseMI GCAATG 3 cut(s) 1347, 3651, 4313
BseNI ACTGG 8 cut(s) 347, 394, 2023, 2496, 3508, 3585, 3932, 4131
BseRI GAGGAG 4 cut(s) 36, 39, 42, 1380
BseSI GKGCMC 4 cut(s) 3459, 3604, 3841, 4372
BseXI GCAGC 5 cut(s) 768, 2382, 2478, 2894, 3369
BsgI GTGCAG 3 cut(s) 819, 1050, 1635
Bsh1236I CGCG 1 cut(s) 4276
BshFI GGCC 4 cut(s) 1179, 2717, 3553, 4319
BshNI GGYRCC 1 cut(s) 3836
BsiHKAI GWGCWC 1 cut(s) 399
BsiHKCI CYCGRG 4 cut(s) 1142, 2141, 3531, 4232
BsiSI CCGG 6 cut(s) 2614, 2807, 2867, 2952, 3366, 3754
BsiWI CGTACG 1 cut(s) 2632
BslFI GGGAC 6 cut(s) 345, 1990, 3326, 3514, 3938, 4078
BslI CCNNNNNNNGG 1 cut(s) 1796
BsmAI GTCTC 3 cut(s) 1797, 2108, 3623
BsmBI CGTCTC 1 cut(s) 1797
BsmFI GGGAC 6 cut(s) 345, 1990, 3326, 3514, 3938, 4078
BsmI GAATGC 4 cut(s) 320, 1535, 1854, 4250
BsnI GGCC 4 cut(s) 1179, 2717, 3553, 4319
BsoBI CYCGRG 4 cut(s) 1142, 2141, 3531, 4232
Bsp119I TTCGAA 1 cut(s) 827
Bsp1286I GDGCHC 5 cut(s) 399, 3459, 3604, 3841, 4372
Bsp13I TCCGGA 1 cut(s) 2866
Bsp1407I TGTACA 1 cut(s) 853
Bsp1720I GCTNAGC 1 cut(s) 4351
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 7 cut(s) 109, 138, 430, 2753, 2971, 4020, 4274
BspANI GGCC 4 cut(s) 1179, 2717, 3553, 4319
BspEI TCCGGA 1 cut(s) 2866
BspFNI CGCG 1 cut(s) 4276
BspHI TCATGA 3 cut(s) 2934, 3787, 4206
BspLI GGNNCC 6 cut(s) 1207, 1696, 1734, 1978, 2811, 3838
BspOI GCTAGC 1 cut(s) 2294
BspPI GGATC 5 cut(s) 359, 2043, 2804, 2817, 2923
BspQI GCTCTTC 1 cut(s) 1533
BspT104I TTCGAA 1 cut(s) 827
BspT107I GGYRCC 1 cut(s) 3836
BspTI CTTAAG 2 cut(s) 2383, 3539
BsrBI CCGCTC 2 cut(s) 140, 430
BsrDI GCAATG 3 cut(s) 1347, 3651, 4313
BsrGI TGTACA 1 cut(s) 853
BsrI ACTGG 8 cut(s) 347, 394, 2023, 2496, 3508, 3585, 3932, 4131
BssT1I CCWWGG 6 cut(s) 327, 400, 1152, 1872, 3204, 4009
Bst2UI CCWGG 5 cut(s) 984, 1545, 3321, 3719, 4321
Bst6I CTCTTC 1 cut(s) 1533
BstAFI CTTAAG 2 cut(s) 2383, 3539
BstAPI GCANNNNNTGC 1 cut(s) 1613
BstAUI TGTACA 1 cut(s) 853
BstBAI YACGTR 1 cut(s) 3433
BstBI TTCGAA 1 cut(s) 827
BstC8I GCNNGC 6 cut(s) 300, 1559, 1670, 1955, 2292, 3761
BstDSI CCRYGG 3 cut(s) 327, 3596, 3878
BstFNI CGCG 1 cut(s) 4276
BstHHI GCGC 2 cut(s) 2590, 4278
BstMAI GTCTC 3 cut(s) 1797, 2108, 3623
BstMWI GCNNNNNNNGC 6 cut(s) 308, 427, 1613, 2488, 2759, 3550
BstNI CCWGG 5 cut(s) 984, 1545, 3321, 3719, 4321
BstNSI RCATGY 5 cut(s) 1356, 1672, 1773, 3763, 4350
BstPAI GACNNNNGTC 2 cut(s) 1413, 3939
BstSCI CCNGG 5 cut(s) 982, 1543, 3319, 3717, 4319
BstSFI CTRYAG 1 cut(s) 2234
BstSLI GKGCMC 4 cut(s) 3459, 3604, 3841, 4372
BstSNI TACGTA 1 cut(s) 3433
BstUI CGCG 1 cut(s) 4276
BstV1I GCAGC 5 cut(s) 768, 2382, 2478, 2894, 3369
BstV2I GAAGAC 2 cut(s) 388, 3949
BstX2I RGATCY 4 cut(s) 16, 1684, 2035, 2809
BstXI CCANNNNNNTGG 3 cut(s) 1127, 1592, 3044
BstYI RGATCY 4 cut(s) 16, 1684, 2035, 2809
BsuI GTATCC 1 cut(s) 3807
BsuRI GGCC 4 cut(s) 1179, 2717, 3553, 4319
BtgI CCRYGG 3 cut(s) 327, 3596, 3878
BtrI CACGTC 1 cut(s) 3547
BtsI GCAGTG 1 cut(s) 4362
Cac8I GCNNGC 6 cut(s) 300, 1559, 1670, 1955, 2292, 3761
CaiI CAGNNNCTG 2 cut(s) 2491, 2974
CciI TCATGA 3 cut(s) 2934, 3787, 4206
CfoI GCGC 2 cut(s) 2590, 4278
Cfr13I GGNCC 4 cut(s) 934, 980, 1977, 3034
CseI GACGC 2 cut(s) 479, 2852
DraI TTTAAA 1 cut(s) 4387
DrdI GACNNNNNNGTC 1 cut(s) 3370
DriI GACNNNNNGTC 1 cut(s) 338
DseDI GACNNNNNNGTC 1 cut(s) 3370
EaeI YGGCCR 2 cut(s) 2715, 4317
Eam1104I CTCTTC 1 cut(s) 1533
Eam1105I GACNNNNNGTC 1 cut(s) 338
EarI CTCTTC 1 cut(s) 1533
Eco105I TACGTA 1 cut(s) 3433
Eco130I CCWWGG 6 cut(s) 327, 400, 1152, 1872, 3204, 4009
Eco32I GATATC 1 cut(s) 3973
Eco47I GGWCC 4 cut(s) 934, 980, 1977, 3034
Eco57I CTGAAG 7 cut(s) 501, 1098, 1826, 1937, 1979, 2256, 2468
Eco88I CYCGRG 4 cut(s) 1142, 2141, 3531, 4232
EcoRI GAATTC 3 cut(s) 2557, 3048, 3121
EcoRII CCWGG 5 cut(s) 982, 1543, 3319, 3717, 4319
EcoRV GATATC 1 cut(s) 3973
EcoT14I CCWWGG 6 cut(s) 327, 400, 1152, 1872, 3204, 4009
EcoT22I ATGCAT 2 cut(s) 1488, 4215
ErhI CCWWGG 6 cut(s) 327, 400, 1152, 1872, 3204, 4009
Esp3I CGTCTC 1 cut(s) 1797
FalI AAGNNNNNCTT 8 cut(s) 459, 491, 804, 836, 1322, 1354, 3762, 3794
FaqI GGGAC 6 cut(s) 345, 1990, 3326, 3514, 3938, 4078
FauI CCCGC 1 cut(s) 116
FauNDI CATATG 2 cut(s) 73, 1098
FbaI TGATCA 1 cut(s) 2572
FblI GTMKAC 2 cut(s) 1712, 4378
Fnu4HI GCNGC 8 cut(s) 138, 757, 2371, 2492, 2754, 2908, 2972, 3383
Fsp4HI GCNGC 8 cut(s) 138, 757, 2371, 2492, 2754, 2908, 2972, 3383
GlaI GCGC 2 cut(s) 2589, 4277
GluI GCNGC 8 cut(s) 138, 757, 2371, 2492, 2754, 2908, 2972, 3383
GsuI CTGGAG 4 cut(s) 411, 1701, 2189, 3525
HaeIII GGCC 4 cut(s) 1179, 2717, 3553, 4319
HapII CCGG 6 cut(s) 2614, 2807, 2867, 2952, 3366, 3754
HgaI GACGC 2 cut(s) 479, 2852
HhaI GCGC 2 cut(s) 2590, 4278
Hin6I GCGC 2 cut(s) 2588, 4276
HinP1I GCGC 2 cut(s) 2588, 4276
HincII GTYRAC 1 cut(s) 1713
HindII GTYRAC 1 cut(s) 1713
HindIII AAGCTT 4 cut(s) 1895, 1951, 1961, 2174
HpaII CCGG 6 cut(s) 2614, 2807, 2867, 2952, 3366, 3754
HphI GGTGA 6 cut(s) 553, 608, 1069, 1468, 1778, 3007
Hpy166II GTNNAC 5 cut(s) 934, 1713, 3624, 3715, 4379
Hpy8I GTNNAC 5 cut(s) 934, 1713, 3624, 3715, 4379
HpyCH4IV ACGT 6 cut(s) 1552, 2635, 3293, 3432, 3546, 4395
HpyF10VI GCNNNNNNNGC 6 cut(s) 308, 427, 1613, 2488, 2759, 3550
HpySE526I ACGT 6 cut(s) 1552, 2635, 3293, 3432, 3546, 4395
HspAI GCGC 2 cut(s) 2588, 4276
Kpn2I TCCGGA 1 cut(s) 2866
Ksp22I TGATCA 1 cut(s) 2572
LguI GCTCTTC 1 cut(s) 1533
LmnI GCTCC 2 cut(s) 1665, 2126
Lsp1109I GCAGC 5 cut(s) 768, 2382, 2478, 2894, 3369
MaeII ACGT 6 cut(s) 1552, 2635, 3293, 3432, 3546, 4395
MaeIII GTNAC 6 cut(s) 1406, 1456, 2457, 2471, 3490, 3853
MbiI CCGCTC 2 cut(s) 140, 430
MfeI CAATTG 3 cut(s) 947, 2004, 4031
MflI RGATCY 4 cut(s) 16, 1684, 2035, 2809
MhlI GDGCHC 5 cut(s) 399, 3459, 3604, 3841, 4372
MlsI TGGCCA 1 cut(s) 4319
MluNI TGGCCA 1 cut(s) 4319
MlyI GAGTC 5 cut(s) 242, 1708, 1850, 3254, 4166
MmeI TCCRAC 4 cut(s) 1577, 1639, 1667, 2013
Mox20I TGGCCA 1 cut(s) 4319
Mph1103I ATGCAT 2 cut(s) 1488, 4215
MroI TCCGGA 1 cut(s) 2866
MroXI GAANNNNTTC 8 cut(s) 201, 225, 1137, 1518, 1881, 2177, 2890, 3989
MscI TGGCCA 1 cut(s) 4319
MslI CAYNNNNRTG 7 cut(s) 132, 621, 866, 1971, 3224, 4243, 4365
Msp20I TGGCCA 1 cut(s) 4319
MspA1I CMGCKG 2 cut(s) 1123, 2971
MspCI CTTAAG 2 cut(s) 2383, 3539
MspI CCGG 6 cut(s) 2614, 2807, 2867, 2952, 3366, 3754
MspR9I CCNGG 5 cut(s) 984, 1545, 3321, 3719, 4321
MunI CAATTG 3 cut(s) 947, 2004, 4031
Mva1269I GAATGC 4 cut(s) 320, 1535, 1854, 4250
MvaI CCWGG 5 cut(s) 984, 1545, 3321, 3719, 4321
MvnI CGCG 1 cut(s) 4276
MwoI GCNNNNNNNGC 6 cut(s) 308, 427, 1613, 2488, 2759, 3550
NcoI CCATGG 1 cut(s) 327
NdeI CATATG 2 cut(s) 73, 1098
NheI GCTAGC 1 cut(s) 2290
NlaIV GGNNCC 6 cut(s) 1207, 1696, 1734, 1978, 2811, 3838
NmeAIII GCCGAG 1 cut(s) 2276
NmuCI GTSAC 4 cut(s) 1406, 1456, 2457, 3853
NsiI ATGCAT 2 cut(s) 1488, 4215
NspI RCATGY 5 cut(s) 1356, 1672, 1773, 3763, 4350
NspV TTCGAA 1 cut(s) 827
OliI CACNNNNGTG 1 cut(s) 3224
PaeI GCATGC 2 cut(s) 1672, 3763
PaeR7I CTCGAG 2 cut(s) 1142, 4232
PagI TCATGA 3 cut(s) 2934, 3787, 4206
PasI CCCWGGG 1 cut(s) 3320
PciSI GCTCTTC 1 cut(s) 1533
PctI GAATGC 4 cut(s) 320, 1535, 1854, 4250
PdmI GAANNNNTTC 8 cut(s) 201, 225, 1137, 1518, 1881, 2177, 2890, 3989
Pfl23II CGTACG 1 cut(s) 2632
PkrI GCNGC 8 cut(s) 139, 758, 2372, 2493, 2755, 2909, 2973, 3384
PleI GAGTC 5 cut(s) 241, 1708, 1849, 3253, 4166
PpsI GAGTC 5 cut(s) 241, 1708, 1849, 3253, 4166
Ppu21I YACGTR 1 cut(s) 3433
PshAI GACNNNNGTC 2 cut(s) 1413, 3939
PshBI ATTAAT 1 cut(s) 2693
Psp6I CCWGG 5 cut(s) 982, 1543, 3319, 3717, 4319
PspGI CCWGG 5 cut(s) 982, 1543, 3319, 3717, 4319
PspLI CGTACG 1 cut(s) 2632
PspN4I GGNNCC 6 cut(s) 1207, 1696, 1734, 1978, 2811, 3838
PspPI GGNCC 4 cut(s) 934, 980, 1977, 3034
PspXI VCTCGAGB 1 cut(s) 4232
PstNI CAGNNNCTG 2 cut(s) 2491, 2974
PsuI RGATCY 4 cut(s) 16, 1684, 2035, 2809
PvuII CAGCTG 1 cut(s) 1123
RseI CAYNNNNRTG 7 cut(s) 132, 621, 866, 1971, 3224, 4243, 4365
SalI GTCGAC 1 cut(s) 1711
SapI GCTCTTC 1 cut(s) 1533
SatI GCNGC 8 cut(s) 138, 757, 2371, 2492, 2754, 2908, 2972, 3383
Sau96I GGNCC 4 cut(s) 934, 980, 1977, 3034
SchI GAGTC 5 cut(s) 242, 1708, 1850, 3254, 4166
ScrFI CCNGG 5 cut(s) 984, 1545, 3321, 3719, 4321
SduI GDGCHC 5 cut(s) 399, 3459, 3604, 3841, 4372
SfcI CTRYAG 1 cut(s) 2234
Sfr274I CTCGAG 2 cut(s) 1142, 4232
SfuI TTCGAA 1 cut(s) 827
SinI GGWCC 4 cut(s) 934, 980, 1977, 3034
SlaI CTCGAG 2 cut(s) 1142, 4232
SmiMI CAYNNNNRTG 7 cut(s) 132, 621, 866, 1971, 3224, 4243, 4365
SnaBI TACGTA 1 cut(s) 3433
SphI GCATGC 2 cut(s) 1672, 3763
SsiI CCGC 7 cut(s) 109, 138, 430, 2753, 2971, 4020, 4274
StyD4I CCNGG 5 cut(s) 982, 1543, 3319, 3717, 4319
StyI CCWWGG 6 cut(s) 327, 400, 1152, 1872, 3204, 4009
TaiI ACGT 6 cut(s) 1555, 2638, 3296, 3435, 3549, 4398
TaqI TCGA 7 cut(s) 827, 1143, 1712, 2303, 3110, 3894, 4233
TatI WGTACW 3 cut(s) 853, 1588, 2463
TauI GCSGC 3 cut(s) 140, 2756, 2974
TseFI GTSAC 4 cut(s) 1406, 1456, 2457, 3853
TseI GCWGC 5 cut(s) 756, 2370, 2491, 2907, 3382
Tsp45I GTSAC 4 cut(s) 1406, 1456, 2457, 3853
TspGWI ACGGA 4 cut(s) 1742, 2496, 3695, 4077
Vha464I CTTAAG 2 cut(s) 2383, 3539
VpaK11BI GGWCC 4 cut(s) 934, 980, 1977, 3034
VspI ATTAAT 1 cut(s) 2693
XbaI TCTAGA 1 cut(s) 1007
XceI RCATGY 5 cut(s) 1356, 1672, 1773, 3763, 4350
XhoI CTCGAG 2 cut(s) 1142, 4232
XmiI GTMKAC 2 cut(s) 1712, 4378
XmnI GAANNNNTTC 8 cut(s) 201, 225, 1137, 1518, 1881, 2177, 2890, 3989
Zsp2I ATGCAT 2 cut(s) 1488, 4215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.