resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 89 - 259 | 4.5e-55 | TIR domain |
| TIR_2 | PF13676 | 91 - 191 | 2e-16 | TIR domain |
| NB-ARC | PF00931 | 271 - 437 | 2.5e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 504 - 575 | 3.9e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 671 - 812 | 1.4e-12 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 689 - 776 | 9.6e-12 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 828 - 927 | 6.3e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 1443 - 1581 | 4.8e-06 | C-JID domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3275 |
| Acc36I | ACCTGC | 2 cut(s) | 1740, 2022 |
| AccB1I | GGYRCC | 1 cut(s) | 4172 |
| AccI | GTMKAC | 5 cut(s) | 1242, 1585, 1904, 2412, 4720 |
| AccII | CGCG | 3 cut(s) | 665, 3822, 4615 |
| AccIII | TCCGGA | 1 cut(s) | 689 |
| AciI | CCGC | 7 cut(s) | 44, 117, 301, 622, 632, 3715, 4613 |
| AclWI | GGATC | 5 cut(s) | 551, 1134, 1193, 3152, 3165 |
| AcoI | YGGCCR | 3 cut(s) | 1600, 3072, 4656 |
| AcuI | CTGAAG | 8 cut(s) | 177, 1749, 1919, 2018, 2129, 2805, 3317, 3969 |
| AcvI | CACGTG | 2 cut(s) | 2719, 3554 |
| AcyI | GRCGYC | 1 cut(s) | 3468 |
| AfeI | AGCGCT | 4 cut(s) | 2508, 2892, 3025, 4012 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 251, 1609, 1988, 3311, 4691 |
| AflII | CTTAAG | 1 cut(s) | 3875 |
| AflIII | ACRYGT | 5 cut(s) | 2718, 3551, 3553, 3820, 4031 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 530 |
| AjiI | CACGTC | 1 cut(s) | 3883 |
| AjnI | CCWGG | 7 cut(s) | 1174, 2481, 3213, 3491, 3570, 3649, 4658 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1517, 1549 |
| AleI | CACNNNNGTG | 1 cut(s) | 3554 |
| Alw21I | GWGCWC | 1 cut(s) | 1284 |
| Alw26I | GTCTC | 6 cut(s) | 163, 1989, 2014, 2300, 2839, 4636 |
| AlwI | GGATC | 5 cut(s) | 551, 1134, 1193, 3152, 3165 |
| Ama87I | CYCGRG | 2 cut(s) | 377, 3867 |
| Aor13HI | TCCGGA | 1 cut(s) | 689 |
| Aor51HI | AGCGCT | 4 cut(s) | 2508, 2892, 3025, 4012 |
| ApeKI | GCWGC | 7 cut(s) | 135, 948, 1808, 2562, 2686, 3246, 4472 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 708, 740 |
| AseI | ATTAAT | 1 cut(s) | 770 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 4328, 4385 |
| AspLEI | GCGC | 8 cut(s) | 667, 2509, 2893, 2990, 3026, 3213, 4013, 4617 |
| AspS9I | GGNCC | 6 cut(s) | 316, 398, 1172, 2169, 3373, 3865 |
| AsuC2I | CCSGG | 2 cut(s) | 1610, 2851 |
| AsuHPI | GGTGA | 7 cut(s) | 596, 745, 800, 1261, 1881, 1970, 3346 |
| AvaI | CYCGRG | 2 cut(s) | 377, 3867 |
| AvaII | GGWCC | 5 cut(s) | 316, 398, 1172, 2169, 3373 |
| BaeGI | GKGCMC | 4 cut(s) | 3132, 3940, 4177, 4714 |
| BalI | TGGCCA | 2 cut(s) | 1602, 4658 |
| BamHI | GGATCC | 1 cut(s) | 3157 |
| BanI | GGYRCC | 1 cut(s) | 4172 |
| BanII | GRGCYC | 2 cut(s) | 1284, 1737 |
| BauI | CACGAG | 1 cut(s) | 1572 |
| BbrPI | CACGTG | 2 cut(s) | 2719, 3554 |
| BbsI | GAAGAC | 5 cut(s) | 24, 228, 580, 1364, 2702 |
| Bbv12I | GWGCWC | 1 cut(s) | 1284 |
| BbvI | GCAGC | 7 cut(s) | 122, 960, 1795, 2574, 2673, 3233, 4459 |
| BceAI | ACGGC | 1 cut(s) | 3086 |
| BciT130I | CCWGG | 7 cut(s) | 1176, 2483, 3215, 3493, 3572, 3651, 4660 |
| BciVI | GTATCC | 1 cut(s) | 4143 |
| BclI | TGATCA | 1 cut(s) | 586 |
| BcnI | CCSGG | 2 cut(s) | 1610, 2851 |
| BcoDI | GTCTC | 6 cut(s) | 163, 1989, 2014, 2300, 2839, 4636 |
| BfaI | CTAG | 7 cut(s) | 47, 1434, 1494, 2459, 2510, 4680, 4760 |
| BfmI | CTRYAG | 4 cut(s) | 1865, 2997, 3699, 4359 |
| BfoI | RGCGCY | 4 cut(s) | 2510, 2894, 3027, 4014 |
| BfrI | CTTAAG | 1 cut(s) | 3875 |
| BfuAI | ACCTGC | 2 cut(s) | 1740, 2022 |
| BfuI | GTATCC | 1 cut(s) | 4143 |
| BisI | GCNGC | 8 cut(s) | 136, 949, 1809, 2563, 2687, 3247, 3716, 4473 |
| BlsI | GCNGC | 8 cut(s) | 137, 950, 1810, 2564, 2688, 3248, 3717, 4474 |
| BmcAI | AGTACT | 2 cut(s) | 3873, 4468 |
| Bme1390I | CCNGG | 9 cut(s) | 1176, 1610, 2483, 2851, 3215, 3493, 3572, 3651, 4660 |
| Bme18I | GGWCC | 5 cut(s) | 316, 398, 1172, 2169, 3373 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 530 |
| BmeT110I | CYCGRG | 2 cut(s) | 377, 3867 |
| BmgBI | CACGTC | 1 cut(s) | 3883 |
| BmgT120I | GGNCC | 6 cut(s) | 316, 398, 1172, 2169, 3373, 3865 |
| BmiI | GGNNCC | 8 cut(s) | 636, 1399, 1926, 2880, 3159, 3219, 4040, 4174 |
| BmrFI | CCNGG | 9 cut(s) | 1176, 1610, 2483, 2851, 3215, 3493, 3572, 3651, 4660 |
| BmrI | ACTGGG | 3 cut(s) | 533, 1706, 3849 |
| BmsI | GCATC | 9 cut(s) | 622, 706, 1665, 3263, 3400, 3448, 3713, 3776, 4579 |
| BmuI | ACTGGG | 3 cut(s) | 533, 1706, 3849 |
| BpiI | GAAGAC | 5 cut(s) | 24, 228, 580, 1364, 2702 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1795, 1827, 2532, 2564 |
| BpmI | CTGGAG | 4 cut(s) | 1893, 2171, 2381, 3593 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4690 |
| BpuEI | CTTGAG | 6 cut(s) | 977, 1298, 1319, 2536, 2680, 3617 |
| BpuMI | CCSGG | 2 cut(s) | 1610, 2851 |
| Bsa29I | ATCGAT | 3 cut(s) | 392, 2805, 3365 |
| BsaAI | YACGTR | 3 cut(s) | 264, 2719, 3554 |
| BsaBI | GATNNNNATC | 2 cut(s) | 555, 1125 |
| BsaHI | GRCGYC | 1 cut(s) | 3468 |
| BsaI | GGTCTC | 1 cut(s) | 163 |
| BsaWI | WCCGGW | 3 cut(s) | 689, 3154, 4089 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 251, 1609, 1988, 3311, 4691 |
| Bse118I | RCCGGY | 1 cut(s) | 3470 |
| Bse1I | ACTGG | 5 cut(s) | 539, 1701, 2215, 3844, 4271 |
| Bse3DI | GCAATG | 2 cut(s) | 2026, 3987 |
| Bse8I | GATNNNNATC | 2 cut(s) | 555, 1125 |
| BseAI | TCCGGA | 1 cut(s) | 689 |
| BseBI | CCWGG | 7 cut(s) | 1176, 2483, 3215, 3493, 3572, 3651, 4660 |
| BseCI | ATCGAT | 3 cut(s) | 392, 2805, 3365 |
| BseJI | GATNNNNATC | 2 cut(s) | 555, 1125 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 251, 1609, 1988, 3311, 4691 |
| BseMI | GCAATG | 2 cut(s) | 2026, 3987 |
| BseNI | ACTGG | 5 cut(s) | 539, 1701, 2215, 3844, 4271 |
| BseRI | GAGGAG | 1 cut(s) | 4499 |
| BseSI | GKGCMC | 4 cut(s) | 3132, 3940, 4177, 4714 |
| BseXI | GCAGC | 7 cut(s) | 122, 960, 1795, 2574, 2673, 3233, 4459 |
| BsgI | GTGCAG | 1 cut(s) | 2639 |
| Bsh1236I | CGCG | 3 cut(s) | 665, 3822, 4615 |
| BshNI | GGYRCC | 1 cut(s) | 4172 |
| BshVI | ATCGAT | 3 cut(s) | 392, 2805, 3365 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1284 |
| BsiHKCI | CYCGRG | 2 cut(s) | 377, 3867 |
| BsiSI | CCGG | 7 cut(s) | 16, 690, 1610, 2850, 3155, 3471, 4090 |
| BsiWI | CGTACG | 1 cut(s) | 264 |
| BslFI | GGGAC | 4 cut(s) | 537, 2805, 4277, 4417 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 251, 1609, 1988, 3311, 4691 |
| BsmAI | GTCTC | 6 cut(s) | 163, 1989, 2014, 2300, 2839, 4636 |
| BsmBI | CGTCTC | 1 cut(s) | 1989 |
| BsmFI | GGGAC | 4 cut(s) | 537, 2805, 4277, 4417 |
| BsmI | GAATGC | 1 cut(s) | 3421 |
| Bso31I | GGTCTC | 1 cut(s) | 163 |
| BsoBI | CYCGRG | 2 cut(s) | 377, 3867 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1284, 1737, 3132, 3940, 4177, 4714 |
| Bsp13I | TCCGGA | 1 cut(s) | 689 |
| Bsp1407I | TGTACA | 2 cut(s) | 1045, 1958 |
| Bsp143I | GATC | 8 cut(s) | 556, 586, 1126, 1185, 1876, 1930, 3157, 3999 |
| Bsp19I | CCATGG | 1 cut(s) | 519 |
| BspACI | CCGC | 7 cut(s) | 44, 117, 301, 622, 632, 3715, 4613 |
| BspDI | ATCGAT | 3 cut(s) | 392, 2805, 3365 |
| BspEI | TCCGGA | 1 cut(s) | 689 |
| BspFNI | CGCG | 3 cut(s) | 665, 3822, 4615 |
| BspHI | TCATGA | 1 cut(s) | 3661 |
| BspLI | GGNNCC | 8 cut(s) | 636, 1399, 1926, 2880, 3159, 3219, 4040, 4174 |
| BspMAI | CTGCAG | 1 cut(s) | 4363 |
| BspMI | ACCTGC | 2 cut(s) | 1740, 2022 |
| BspPI | GGATC | 5 cut(s) | 551, 1134, 1193, 3152, 3165 |
| BspQI | GCTCTTC | 1 cut(s) | 1725 |
| BspT107I | GGYRCC | 1 cut(s) | 4172 |
| BspTI | CTTAAG | 1 cut(s) | 3875 |
| BspTNI | GGTCTC | 1 cut(s) | 163 |
| BsrDI | GCAATG | 2 cut(s) | 2026, 3987 |
| BsrFI | RCCGGY | 1 cut(s) | 3470 |
| BsrGI | TGTACA | 2 cut(s) | 1045, 1958 |
| BsrI | ACTGG | 5 cut(s) | 539, 1701, 2215, 3844, 4271 |
| BssAI | RCCGGY | 1 cut(s) | 3470 |
| BssMI | GATC | 8 cut(s) | 556, 586, 1126, 1185, 1876, 1930, 3157, 3999 |
| BssNAI | GTATAC | 2 cut(s) | 1243, 1586 |
| BssNI | GRCGYC | 1 cut(s) | 3468 |
| BssSI | CACGAG | 1 cut(s) | 1572 |
| BssT1I | CCWWGG | 6 cut(s) | 495, 519, 1344, 2574, 3534, 4348 |
| Bst1107I | GTATAC | 2 cut(s) | 1243, 1586 |
| Bst2BI | CACGAG | 1 cut(s) | 1572 |
| Bst2UI | CCWGG | 7 cut(s) | 1176, 2483, 3215, 3493, 3572, 3651, 4660 |
| Bst4CI | ACNGT | 8 cut(s) | 901, 2240, 2269, 2430, 2950, 3331, 3611, 3700 |
| Bst6I | CTCTTC | 1 cut(s) | 1725 |
| BstACI | GRCGYC | 1 cut(s) | 3468 |
| BstAFI | CTTAAG | 1 cut(s) | 3875 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3764 |
| BstAUI | TGTACA | 2 cut(s) | 1045, 1958 |
| BstBAI | YACGTR | 3 cut(s) | 264, 2719, 3554 |
| BstC8I | GCNNGC | 7 cut(s) | 44, 1267, 1761, 1862, 2147, 3472, 4097 |
| BstDSI | CCRYGG | 5 cut(s) | 519, 2939, 3102, 3932, 4217 |
| BstFNI | CGCG | 3 cut(s) | 665, 3822, 4615 |
| BstH2I | RGCGCY | 4 cut(s) | 2510, 2894, 3027, 4014 |
| BstHHI | GCGC | 8 cut(s) | 667, 2509, 2893, 2990, 3026, 3213, 4013, 4617 |
| BstKTI | GATC | 8 cut(s) | 559, 589, 1129, 1188, 1879, 1933, 3160, 4002 |
| BstMAI | GTCTC | 6 cut(s) | 163, 1989, 2014, 2300, 2839, 4636 |
| BstMBI | GATC | 8 cut(s) | 556, 586, 1126, 1185, 1876, 1930, 3157, 3999 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 619, 1271, 1805, 2683, 2695, 3107, 3764, 3886 |
| BstNI | CCWGG | 7 cut(s) | 1176, 2483, 3215, 3493, 3572, 3651, 4660 |
| BstNSI | RCATGY | 3 cut(s) | 1548, 4035, 4099 |
| BstSCI | CCNGG | 9 cut(s) | 1174, 1608, 2481, 2849, 3213, 3491, 3570, 3649, 4658 |
| BstSFI | CTRYAG | 4 cut(s) | 1865, 2997, 3699, 4359 |
| BstSLI | GKGCMC | 4 cut(s) | 3132, 3940, 4177, 4714 |
| BstUI | CGCG | 3 cut(s) | 665, 3822, 4615 |
| BstV1I | GCAGC | 7 cut(s) | 122, 960, 1795, 2574, 2673, 3233, 4459 |
| BstV2I | GAAGAC | 5 cut(s) | 24, 228, 580, 1364, 2702 |
| BstX2I | RGATCY | 1 cut(s) | 3157 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1060, 1319, 3383 |
| BstYI | RGATCY | 1 cut(s) | 3157 |
| BstZ17I | GTATAC | 2 cut(s) | 1243, 1586 |
| Bsu15I | ATCGAT | 3 cut(s) | 392, 2805, 3365 |
| BsuI | GTATCC | 1 cut(s) | 4143 |
| BsuTUI | ATCGAT | 3 cut(s) | 392, 2805, 3365 |
| BtgI | CCRYGG | 5 cut(s) | 519, 2939, 3102, 3932, 4217 |
| BtgZI | GCGATG | 2 cut(s) | 1525, 1814 |
| BtrI | CACGTC | 1 cut(s) | 3883 |
| BtsI | GCAGTG | 3 cut(s) | 1603, 2058, 3132 |
| BtsIMutI | CAGTG | 8 cut(s) | 546, 1603, 1917, 2058, 2741, 3132, 3646, 4009 |
| BveI | ACCTGC | 2 cut(s) | 1740, 2022 |
| Cac8I | GCNNGC | 7 cut(s) | 44, 1267, 1761, 1862, 2147, 3472, 4097 |
| CciI | TCATGA | 1 cut(s) | 3661 |
| CfoI | GCGC | 8 cut(s) | 667, 2509, 2893, 2990, 3026, 3213, 4013, 4617 |
| Cfr10I | RCCGGY | 1 cut(s) | 3470 |
| Cfr13I | GGNCC | 6 cut(s) | 316, 398, 1172, 2169, 3373, 3865 |
| ClaI | ATCGAT | 3 cut(s) | 392, 2805, 3365 |
| CseI | GACGC | 2 cut(s) | 671, 3476 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1950, 1985 |
| DpnI | GATC | 8 cut(s) | 558, 588, 1128, 1187, 1878, 1932, 3159, 4001 |
| DpnII | GATC | 8 cut(s) | 556, 586, 1126, 1185, 1876, 1930, 3157, 3999 |
| DraI | TTTAAA | 2 cut(s) | 628, 4563 |
| DriI | GACNNNNNGTC | 1 cut(s) | 530 |
| EaeI | YGGCCR | 3 cut(s) | 1600, 3072, 4656 |
| Eam1104I | CTCTTC | 1 cut(s) | 1725 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 530 |
| EarI | CTCTTC | 1 cut(s) | 1725 |
| Ecl136II | GAGCTC | 1 cut(s) | 1282 |
| Eco130I | CCWWGG | 6 cut(s) | 495, 519, 1344, 2574, 3534, 4348 |
| Eco147I | AGGCCT | 1 cut(s) | 2481 |
| Eco24I | GRGCYC | 2 cut(s) | 1284, 1737 |
| Eco31I | GGTCTC | 1 cut(s) | 163 |
| Eco47I | GGWCC | 5 cut(s) | 316, 398, 1172, 2169, 3373 |
| Eco47III | AGCGCT | 4 cut(s) | 2508, 2892, 3025, 4012 |
| Eco53kI | GAGCTC | 1 cut(s) | 1282 |
| Eco57I | CTGAAG | 8 cut(s) | 177, 1749, 1919, 2018, 2129, 2805, 3317, 3969 |
| Eco72I | CACGTG | 2 cut(s) | 2719, 3554 |
| Eco88I | CYCGRG | 2 cut(s) | 377, 3867 |
| EcoICRI | GAGCTC | 1 cut(s) | 1282 |
| EcoRI | GAATTC | 2 cut(s) | 2776, 3387 |
| EcoRII | CCWGG | 7 cut(s) | 1174, 2481, 3213, 3491, 3570, 3649, 4658 |
| EcoT14I | CCWWGG | 6 cut(s) | 495, 519, 1344, 2574, 3534, 4348 |
| EcoT22I | ATGCAT | 2 cut(s) | 1680, 3769 |
| EcoT38I | GRGCYC | 2 cut(s) | 1284, 1737 |
| ErhI | CCWWGG | 6 cut(s) | 495, 519, 1344, 2574, 3534, 4348 |
| Esp3I | CGTCTC | 1 cut(s) | 1989 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 651, 683, 996, 1028, 4098, 4130 |
| FaqI | GGGAC | 4 cut(s) | 537, 2805, 4277, 4417 |
| FauI | CCCGC | 2 cut(s) | 51, 308 |
| FbaI | TGATCA | 1 cut(s) | 586 |
| FblI | GTMKAC | 5 cut(s) | 1242, 1585, 1904, 2412, 4720 |
| Fnu4HI | GCNGC | 8 cut(s) | 136, 949, 1809, 2563, 2687, 3247, 3716, 4473 |
| FriOI | GRGCYC | 2 cut(s) | 1284, 1737 |
| Fsp4HI | GCNGC | 8 cut(s) | 136, 949, 1809, 2563, 2687, 3247, 3716, 4473 |
| FspBI | CTAG | 7 cut(s) | 47, 1434, 1494, 2459, 2510, 4680, 4760 |
| GlaI | GCGC | 8 cut(s) | 666, 2508, 2892, 2989, 3025, 3212, 4012, 4616 |
| GluI | GCNGC | 8 cut(s) | 136, 949, 1809, 2563, 2687, 3247, 3716, 4473 |
| GsuI | CTGGAG | 4 cut(s) | 1893, 2171, 2381, 3593 |
| HaeII | RGCGCY | 4 cut(s) | 2510, 2894, 3027, 4014 |
| HapII | CCGG | 7 cut(s) | 16, 690, 1610, 2850, 3155, 3471, 4090 |
| HgaI | GACGC | 2 cut(s) | 671, 3476 |
| HhaI | GCGC | 8 cut(s) | 667, 2509, 2893, 2990, 3026, 3213, 4013, 4617 |
| Hin1I | GRCGYC | 1 cut(s) | 3468 |
| Hin6I | GCGC | 8 cut(s) | 665, 2507, 2891, 2988, 3024, 3211, 4011, 4615 |
| HinP1I | GCGC | 8 cut(s) | 665, 2507, 2891, 2988, 3024, 3211, 4011, 4615 |
| HincII | GTYRAC | 1 cut(s) | 1905 |
| HindII | GTYRAC | 1 cut(s) | 1905 |
| HindIII | AAGCTT | 4 cut(s) | 1963, 2143, 2366, 2696 |
| HpaII | CCGG | 7 cut(s) | 16, 690, 1610, 2850, 3155, 3471, 4090 |
| HphI | GGTGA | 7 cut(s) | 596, 745, 800, 1261, 1881, 1970, 3346 |
| Hpy99I | CGWCG | 1 cut(s) | 3080 |
| HpyCH4III | ACNGT | 8 cut(s) | 901, 2240, 2269, 2430, 2950, 3331, 3611, 3700 |
| HpyCH4IV | ACGT | 8 cut(s) | 263, 2718, 3553, 3623, 3882, 4558, 4737, 4744 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 619, 1271, 1805, 2683, 2695, 3107, 3764, 3886 |
| HpySE526I | ACGT | 8 cut(s) | 263, 2718, 3553, 3623, 3882, 4558, 4737, 4744 |
| Hsp92I | GRCGYC | 1 cut(s) | 3468 |
| HspAI | GCGC | 8 cut(s) | 665, 2507, 2891, 2988, 3024, 3211, 4011, 4615 |
| Kpn2I | TCCGGA | 1 cut(s) | 689 |
| KroI | GCCGGC | 1 cut(s) | 3470 |
| KroNI | GCCGGC | 1 cut(s) | 3472 |
| Ksp22I | TGATCA | 1 cut(s) | 586 |
| Kzo9I | GATC | 8 cut(s) | 556, 586, 1126, 1185, 1876, 1930, 3157, 3999 |
| LguI | GCTCTTC | 1 cut(s) | 1725 |
| LmnI | GCTCC | 6 cut(s) | 1857, 1945, 2152, 2318, 2540, 4304 |
| Lsp1109I | GCAGC | 7 cut(s) | 122, 960, 1795, 2574, 2673, 3233, 4459 |
| LweI | GCATC | 9 cut(s) | 622, 706, 1665, 3263, 3400, 3448, 3713, 3776, 4579 |
| MaeI | CTAG | 7 cut(s) | 47, 1434, 1494, 2459, 2510, 4680, 4760 |
| MaeII | ACGT | 8 cut(s) | 263, 2718, 3553, 3623, 3882, 4558, 4737, 4744 |
| MaeIII | GTNAC | 7 cut(s) | 196, 1576, 1648, 2896, 3187, 3829, 4292 |
| MalI | GATC | 8 cut(s) | 558, 588, 1128, 1187, 1878, 1932, 3159, 4001 |
| MboI | GATC | 8 cut(s) | 556, 586, 1126, 1185, 1876, 1930, 3157, 3999 |
| MfeI | CAATTG | 9 cut(s) | 438, 505, 1139, 1211, 2196, 2373, 2681, 4235, 4427 |
| MflI | RGATCY | 1 cut(s) | 3157 |
| MhlI | GDGCHC | 6 cut(s) | 1284, 1737, 3132, 3940, 4177, 4714 |
| MlsI | TGGCCA | 2 cut(s) | 1602, 4658 |
| MluI | ACGCGT | 1 cut(s) | 3820 |
| MluNI | TGGCCA | 2 cut(s) | 1602, 4658 |
| MlyI | GAGTC | 6 cut(s) | 1900, 2795, 2841, 3234, 3584, 3674 |
| MmeI | TCCRAC | 4 cut(s) | 1769, 1859, 1923, 4393 |
| Mox20I | TGGCCA | 2 cut(s) | 1602, 4658 |
| Mph1103I | ATGCAT | 2 cut(s) | 1680, 3769 |
| MroI | TCCGGA | 1 cut(s) | 689 |
| MroNI | GCCGGC | 1 cut(s) | 3470 |
| MroXI | GAANNNNTTC | 2 cut(s) | 4328, 4385 |
| MscI | TGGCCA | 2 cut(s) | 1602, 4658 |
| MslI | CAYNNNNRTG | 5 cut(s) | 813, 1058, 2721, 3554, 4707 |
| Msp20I | TGGCCA | 2 cut(s) | 1602, 4658 |
| MspA1I | CMGCKG | 3 cut(s) | 119, 1315, 3246 |
| MspCI | CTTAAG | 1 cut(s) | 3875 |
| MspI | CCGG | 7 cut(s) | 16, 690, 1610, 2850, 3155, 3471, 4090 |
| MspR9I | CCNGG | 9 cut(s) | 1176, 1610, 2483, 2851, 3215, 3493, 3572, 3651, 4660 |
| MunI | CAATTG | 9 cut(s) | 438, 505, 1139, 1211, 2196, 2373, 2681, 4235, 4427 |
| Mva1269I | GAATGC | 1 cut(s) | 3421 |
| MvaI | CCWGG | 7 cut(s) | 1176, 2483, 3215, 3493, 3572, 3651, 4660 |
| MvnI | CGCG | 3 cut(s) | 665, 3822, 4615 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 619, 1271, 1805, 2683, 2695, 3107, 3764, 3886 |
| NaeI | GCCGGC | 1 cut(s) | 3472 |
| NciI | CCSGG | 2 cut(s) | 1610, 2851 |
| NcoI | CCATGG | 1 cut(s) | 519 |
| NdeII | GATC | 8 cut(s) | 556, 586, 1126, 1185, 1876, 1930, 3157, 3999 |
| NgoMIV | GCCGGC | 1 cut(s) | 3470 |
| NlaIV | GGNNCC | 8 cut(s) | 636, 1399, 1926, 2880, 3159, 3219, 4040, 4174 |
| NmuCI | GTSAC | 3 cut(s) | 2896, 3187, 4292 |
| NsiI | ATGCAT | 2 cut(s) | 1680, 3769 |
| NspI | RCATGY | 3 cut(s) | 1548, 4035, 4099 |
| OliI | CACNNNNGTG | 1 cut(s) | 3554 |
| PaeI | GCATGC | 1 cut(s) | 4099 |
| PaeR7I | CTCGAG | 1 cut(s) | 377 |
| PagI | TCATGA | 1 cut(s) | 3661 |
| PceI | AGGCCT | 1 cut(s) | 2481 |
| PciI | ACATGT | 1 cut(s) | 4031 |
| PciSI | GCTCTTC | 1 cut(s) | 1725 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4159 |
| PctI | GAATGC | 1 cut(s) | 3421 |
| PdiI | GCCGGC | 1 cut(s) | 3472 |
| PdmI | GAANNNNTTC | 2 cut(s) | 4328, 4385 |
| Pfl23II | CGTACG | 1 cut(s) | 264 |
| PkrI | GCNGC | 8 cut(s) | 137, 950, 1810, 2564, 2688, 3248, 3717, 4474 |
| PleI | GAGTC | 6 cut(s) | 1900, 2794, 2840, 3234, 3583, 3673 |
| PmaCI | CACGTG | 2 cut(s) | 2719, 3554 |
| PmlI | CACGTG | 2 cut(s) | 2719, 3554 |
| PpsI | GAGTC | 6 cut(s) | 1900, 2794, 2840, 3234, 3583, 3673 |
| Ppu21I | YACGTR | 3 cut(s) | 264, 2719, 3554 |
| PscI | ACATGT | 1 cut(s) | 4031 |
| PshBI | ATTAAT | 1 cut(s) | 770 |
| PsiI | TTATAA | 1 cut(s) | 3275 |
| Psp124BI | GAGCTC | 1 cut(s) | 1284 |
| Psp6I | CCWGG | 7 cut(s) | 1174, 2481, 3213, 3491, 3570, 3649, 4658 |
| PspCI | CACGTG | 2 cut(s) | 2719, 3554 |
| PspGI | CCWGG | 7 cut(s) | 1174, 2481, 3213, 3491, 3570, 3649, 4658 |
| PspLI | CGTACG | 1 cut(s) | 264 |
| PspN4I | GGNNCC | 8 cut(s) | 636, 1399, 1926, 2880, 3159, 3219, 4040, 4174 |
| PspPI | GGNCC | 6 cut(s) | 316, 398, 1172, 2169, 3373, 3865 |
| PsrI | GAACNNNNNNTAC | 6 cut(s) | 89, 121, 257, 289, 4134, 4166 |
| PstI | CTGCAG | 1 cut(s) | 4363 |
| PsuI | RGATCY | 1 cut(s) | 3157 |
| PvuII | CAGCTG | 2 cut(s) | 1315, 3246 |
| RseI | CAYNNNNRTG | 5 cut(s) | 813, 1058, 2721, 3554, 4707 |
| SacI | GAGCTC | 1 cut(s) | 1284 |
| SalI | GTCGAC | 1 cut(s) | 1903 |
| SapI | GCTCTTC | 1 cut(s) | 1725 |
| SatI | GCNGC | 8 cut(s) | 136, 949, 1809, 2563, 2687, 3247, 3716, 4473 |
| Sau3AI | GATC | 8 cut(s) | 556, 586, 1126, 1185, 1876, 1930, 3157, 3999 |
| Sau96I | GGNCC | 6 cut(s) | 316, 398, 1172, 2169, 3373, 3865 |
| ScaI | AGTACT | 2 cut(s) | 3873, 4468 |
| SchI | GAGTC | 6 cut(s) | 1900, 2795, 2841, 3234, 3584, 3674 |
| ScrFI | CCNGG | 9 cut(s) | 1176, 1610, 2483, 2851, 3215, 3493, 3572, 3651, 4660 |
| SduI | GDGCHC | 6 cut(s) | 1284, 1737, 3132, 3940, 4177, 4714 |
| SfaNI | GCATC | 9 cut(s) | 622, 706, 1665, 3263, 3400, 3448, 3713, 3776, 4579 |
| SfcI | CTRYAG | 4 cut(s) | 1865, 2997, 3699, 4359 |
| Sfr274I | CTCGAG | 1 cut(s) | 377 |
| SinI | GGWCC | 5 cut(s) | 316, 398, 1172, 2169, 3373 |
| SlaI | CTCGAG | 1 cut(s) | 377 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 813, 1058, 2721, 3554, 4707 |
| SmlI | CTYRAG | 8 cut(s) | 377, 956, 1277, 1334, 2515, 2659, 3596, 3875 |
| SmoI | CTYRAG | 8 cut(s) | 377, 956, 1277, 1334, 2515, 2659, 3596, 3875 |
| SphI | GCATGC | 1 cut(s) | 4099 |
| SseBI | AGGCCT | 1 cut(s) | 2481 |
| SsiI | CCGC | 7 cut(s) | 44, 117, 301, 622, 632, 3715, 4613 |
| SspI | AATATT | 3 cut(s) | 1530, 1955, 2082 |
| SspMI | CTAG | 7 cut(s) | 47, 1434, 1494, 2459, 2510, 4680, 4760 |
| SstI | GAGCTC | 1 cut(s) | 1284 |
| StuI | AGGCCT | 1 cut(s) | 2481 |
| StyD4I | CCNGG | 9 cut(s) | 1174, 1608, 2481, 2849, 3213, 3491, 3570, 3649, 4658 |
| StyI | CCWWGG | 6 cut(s) | 495, 519, 1344, 2574, 3534, 4348 |
| TaaI | ACNGT | 8 cut(s) | 901, 2240, 2269, 2430, 2950, 3331, 3611, 3700 |
| TaiI | ACGT | 8 cut(s) | 266, 2721, 3556, 3626, 3885, 4561, 4740, 4747 |
| TatI | WGTACW | 6 cut(s) | 1045, 1091, 1958, 2735, 3871, 4466 |
| TauI | GCSGC | 1 cut(s) | 3718 |
| TscAI | CASTG | 8 cut(s) | 546, 1610, 1924, 2065, 2748, 3139, 3646, 4009 |
| TseFI | GTSAC | 3 cut(s) | 2896, 3187, 4292 |
| TseI | GCWGC | 7 cut(s) | 135, 948, 1808, 2562, 2686, 3246, 4472 |
| Tsp45I | GTSAC | 3 cut(s) | 2896, 3187, 4292 |
| TspGWI | ACGGA | 6 cut(s) | 329, 1365, 2691, 2956, 3422, 4031 |
| TspRI | CASTG | 8 cut(s) | 546, 1610, 1924, 2065, 2748, 3139, 3646, 4009 |
| Vha464I | CTTAAG | 1 cut(s) | 3875 |
| VpaK11BI | GGWCC | 5 cut(s) | 316, 398, 1172, 2169, 3373 |
| VspI | ATTAAT | 1 cut(s) | 770 |
| XceI | RCATGY | 3 cut(s) | 1548, 4035, 4099 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1351, 3364, 3510 |
| XhoI | CTCGAG | 1 cut(s) | 377 |
| XmiI | GTMKAC | 5 cut(s) | 1242, 1585, 1904, 2412, 4720 |
| XmnI | GAANNNNTTC | 2 cut(s) | 4328, 4385 |
| XspI | CTAG | 7 cut(s) | 47, 1434, 1494, 2459, 2510, 4680, 4760 |
| ZrmI | AGTACT | 2 cut(s) | 3873, 4468 |
| Zsp2I | ATGCAT | 2 cut(s) | 1680, 3769 |