Rmu_sc0004799.1_g000007

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004799.1
OG0000129
Physical Location & Seq
Reverse (-)
33320 .. 36743
3424 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004799.1_g000007.1.cds

Sequence Viewer

Length: 3021 bp
atgctacggcttattgatctgactggttcccaatacttgatgtcgactccagacttcactgaggttcctgatcttgaaacgttggtgcttcaatgttgtacaagcttggtggaggttcacccgtctcttggatttctgaagaaacttgtctctttgaatatgacatgttgcatgtctattgagagccttccacctttcactgccttggaatcccttcaaatattgaggctttcattctgttcagcactgaagaagtttccagaaattgaaggaaatatgaaaagcttgctggagctttatttggatgggaccagcattgaggaattgcctccatcaattgaacgcttgactggtcttaccatgttgagtctagcacactgtaaaaaccttttgcatcttcccaatgcaattgggtgcctgacatctttgaaaagtctccatctaacaggttgctccaatattgatgagatacctgagaatctgaatggtctgaaatgtctggaaacgcttgcaattggtggaacttccataagggagttatctttcattgtaggcatgaagaatctacactatatatcctgcggaggatgtaaatttctagtttcagaatcatgcaatgtcctggcttcgttatcgaatttgatagagctagacttgagttattgcaatctgatggatggagcatttctcaatgattttagcagcctaatctccttggaagtgttagatttacgtggtaattgctttgtgcgattacctgaaagtatctctcaactctcaaagctcggcactctggacttgaggaattgcagacagcttcaattgctgcccaagaagcttccgttaagtcttagttacgtgagtgcgcaagattgtacttcactgacggattacccaaaccaaatcgaagtattgaattcatcggagtcgggagtgactgttgtcaattccctcaattcttcagcacttggagacccacaaagttccgaaattggccgacatccgctcctcctgacaaccccgtccaagtcaccccgaaattggccgcctaatttaagagatgaggaggactatatgtacctgtacgctcgtccagaaaatgtgggggaatcttcccaactgcgtgtgacacataagcataccgagggggaacacgtttatcatttgccaccggcagctcaatcccatataaatcaaatgtcttcctgggcaaaattcgctgccgtacgtcctggcgatgaaattccagagtggttcagcactacatctatcagaaatcccatatcaatctcgatacctcaaaatctggccgatgatgacaagtggaagggatttgccgcgtgtgctgtattctcagtcaaggggcatactgctctgacccttattgaaccggatcctgattttcttaattacaactatcaaatcacattggaaactgatgttgtgcgtctgaaacgagtagttgtgtctggaggggatatattggagggctgctttggattaagttctcatctgcttgtgatttgcggtatatctagtttcgaggttccagagagggagttaaatcaatcaactgtgatgagggctatatttgaaaccaccaatccatccatggtggtccaggaatgtggaattcgtctggtctatgagcaagatgctggatggcattccagaatgctcgggggcgttgattcgatctgtctgaatgaagttgaggaccacgccactgtacgggagtgtgcctggcttagtgaatctgataaatgggagaaattcattccacccttggaagaagaatccacatttgtgctgagaaagaaccttgagtctgttcttccaagattccttgaggcactaaactgttatcctaaaacgtacaaatttaacctcagtggaaggccagggtggtttcatgagtcgtttgcctttcatgagaggccagattttaccgtagtgtcaatcaagcggcctcaaaatttacacaagagcaagaagtggatgggatttgcaatatatgcatcacttgtagaggaagtggggcagacgatgacagaggaaaactatcagatatcttttatactaacaactgataaatctcatatgagtatgaccggagaatttaatcacgtcaggccattgtcagaagaacatcatcgactattggttatttacataccgcgggaacagattcccgaagtgttgttcactcagacattaacaactgcaatggacttttgcatcaagatcagtgatggccctcatgtaaaggttcaaagatgtgggttccgtattgtgtaccaagaagatatacaaggatttgctgatacaattatccggtgcatgcaaagggaagattctcttaaatcctacaataagttggtggtagaagaatggatactattgatacatttgcaaggtgccctaaatttagagagaatgacagaacgggattccagaaccccacgggaaaaacaatttgaattgcacttacaaaaatatagaaattgggactggtctgaccctcgttcttttttttgtcacttcgagcgagttcaaatctccaagttgaaatggttcatgcctttcatcaaccaaggcaactctgcacaaatccaactgcctctgaatgtgttcgatgattataattggttggggtttgccgtatgttctcaattgtcccacgaccaatatccaaacattggtcttggtagtactgctcctgattcaggggatgttacgcttaattgcaatctggcctctgatgttgcttgggagggcttatttgattacacgactgaagtaaacattcgagagccatcggaatacgatgcgacttggttcttttatataccgcgcactaaagttcgtagtaaagtctggaggcaatgcaaattggccaggataactatgtggttgtctagcccaggctcagcagtagtgcataattgtgcccttcgtctactatttaaggaggacgttgaacatcttgtagaaacactgaccctcgccgaattaccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

1006

Amino Acids

114.02

Weight (kDa)

5.36

Isoelectric Point (pI)

47.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2643
AasI GACNNNNNNGTC 1 cut(s) 1021
Acc16I TGCGCA 1 cut(s) 867
AccB1I GGYRCC 2 cut(s) 414, 2417
AccB7I CCANNNNNTGG 1 cut(s) 2699
AccBSI CCGCTC 1 cut(s) 1006
AccI GTMKAC 2 cut(s) 44, 2959
AccII CGCG 3 cut(s) 1340, 2179, 2854
AciI CCGC 9 cut(s) 582, 1004, 1046, 1338, 1527, 1966, 2177, 2179, 2852
AclI AACGTT 1 cut(s) 80
AclWI GGATC 2 cut(s) 1388, 1401
AcoI YGGCCR 4 cut(s) 994, 1043, 1308, 2895
AcuI CTGAAG 4 cut(s) 158, 269, 945, 2817
AfaI GTAC 9 cut(s) 100, 877, 1079, 1085, 1227, 1731, 1877, 2297, 2713
AfiI CCNNNNNNNGG 5 cut(s) 128, 1041, 1731, 2699, 2726
AflIII ACRYGT 2 cut(s) 164, 1153
AjiI CACGTC 1 cut(s) 2128
AjnI CCWGG 8 cut(s) 621, 1205, 1231, 1620, 1742, 1900, 2897, 2923
AleI CACNNNNGTG 1 cut(s) 1805
AluBI AGCT 8 cut(s) 105, 285, 295, 649, 784, 817, 838, 1178
AluI AGCT 8 cut(s) 105, 285, 295, 649, 784, 817, 838, 1178
Alw26I GTCTC 4 cut(s) 129, 154, 440, 966
AlwI GGATC 2 cut(s) 1388, 1401
Ama87I CYCGRG 1 cut(s) 1679
ApeKI GCWGC 5 cut(s) 702, 826, 1175, 1220, 1491
Asp700I GAANNNNTTC 4 cut(s) 213, 2187, 2573, 2630
AspLEI GCGC 2 cut(s) 868, 2856
AspS9I GGNCC 4 cut(s) 309, 1618, 1717, 2255
AsuHPI GGTGA 2 cut(s) 110, 1023
AvaI CYCGRG 1 cut(s) 1679
AvaII GGWCC 3 cut(s) 309, 1618, 1717
BaeGI GKGCMC 2 cut(s) 2422, 2953
BalI TGGCCA 1 cut(s) 2897
BamHI GGATCC 1 cut(s) 1393
BanI GGYRCC 2 cut(s) 414, 2417
BarI GAAGNNNNNNTAC 2 cut(s) 2379, 2411
BbsI GAAGAC 1 cut(s) 1194
BbvI GCAGC 5 cut(s) 714, 813, 1187, 1207, 1478
BceAI ACGGC 3 cut(s) 23, 1208, 2645
BciT130I CCWGG 8 cut(s) 623, 1207, 1233, 1622, 1744, 1902, 2899, 2925
BciVI GTATCC 1 cut(s) 2388
BcoDI GTCTC 4 cut(s) 129, 154, 440, 966
BfaI CTAG 5 cut(s) 371, 599, 650, 1536, 2919
BfuI GTATCC 1 cut(s) 2388
BisI GCNGC 8 cut(s) 703, 827, 1046, 1176, 1221, 1338, 1492, 1967
BlpI GCTNAGC 1 cut(s) 2929
BlsI GCNGC 8 cut(s) 704, 828, 1047, 1177, 1222, 1339, 1493, 1968
BmcAI AGTACT 1 cut(s) 2713
Bme1390I CCNGG 8 cut(s) 623, 1207, 1233, 1622, 1744, 1902, 2899, 2925
Bme18I GGWCC 3 cut(s) 309, 1618, 1717
BmeT110I CYCGRG 1 cut(s) 1679
BmgBI CACGTC 1 cut(s) 2128
BmgT120I GGNCC 4 cut(s) 309, 1618, 1717, 2255
BmiI GGNNCC 8 cut(s) 28, 66, 310, 416, 1395, 1548, 2285, 2419
BmrFI CCNGG 8 cut(s) 623, 1207, 1233, 1622, 1744, 1902, 2899, 2925
BmsI GCATC 5 cut(s) 403, 1645, 2027, 2247, 2818
BoxI GACNNNNGTC 1 cut(s) 941
BpiI GAAGAC 1 cut(s) 1194
BplI GAGNNNNNCTC 2 cut(s) 672, 704
BpmI CTGGAG 4 cut(s) 33, 311, 1491, 2899
Bpu1102I GCTNAGC 1 cut(s) 2929
BpuEI CTTGAG 4 cut(s) 676, 820, 1844, 1868
BsaAI YACGTR 2 cut(s) 734, 859
BsaI GGTCTC 1 cut(s) 966
BsaWI WCCGGW 3 cut(s) 1390, 2111, 2334
BsaXI ACNNNNNCTCC 4 cut(s) 924, 954, 990, 1020
Bsc4I CCNNNNNNNGG 5 cut(s) 128, 1041, 1731, 2699, 2726
Bse118I RCCGGY 1 cut(s) 1171
Bse1I ACTGG 3 cut(s) 28, 355, 2516
Bse3DI GCAATG 3 cut(s) 622, 2232, 2891
BseBI CCWGG 8 cut(s) 623, 1207, 1233, 1622, 1744, 1902, 2899, 2925
BseGI GGATG 8 cut(s) 310, 593, 682, 1000, 1607, 1667, 2004, 2737
BseLI CCNNNNNNNGG 5 cut(s) 128, 1041, 1731, 2699, 2726
BseMI GCAATG 3 cut(s) 622, 2232, 2891
BseMII CTCAG 7 cut(s) 51, 465, 1368, 1802, 1903, 2222, 2943
BseNI ACTGG 3 cut(s) 28, 355, 2516
BseRI GAGGAG 2 cut(s) 998, 1079
BseSI GKGCMC 2 cut(s) 2422, 2953
BseXI GCAGC 5 cut(s) 714, 813, 1187, 1207, 1478
BsgI GTGCAG 1 cut(s) 2589
Bsh1236I CGCG 3 cut(s) 1340, 2179, 2854
BshNI GGYRCC 2 cut(s) 414, 2417
BsiHKCI CYCGRG 1 cut(s) 1679
BsiSI CCGG 4 cut(s) 1172, 1391, 2112, 2335
BsiWI CGTACG 1 cut(s) 1225
BslFI GGGAC 3 cut(s) 322, 2522, 2662
BslI CCNNNNNNNGG 5 cut(s) 128, 1041, 1731, 2699, 2726
BsmAI GTCTC 4 cut(s) 129, 154, 440, 966
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 3 cut(s) 322, 2522, 2662
BsmI GAATGC 2 cut(s) 1666, 1680
Bso31I GGTCTC 1 cut(s) 966
BsoBI CYCGRG 1 cut(s) 1679
Bsp1286I GDGCHC 2 cut(s) 2422, 2953
Bsp1407I TGTACA 1 cut(s) 98
Bsp143I GATC 5 cut(s) 16, 70, 1393, 1695, 2244
Bsp1720I GCTNAGC 1 cut(s) 2929
Bsp19I CCATGG 1 cut(s) 1611
BspACI CCGC 9 cut(s) 582, 1004, 1046, 1338, 1527, 1966, 2177, 2179, 2852
BspCNI CTCAG 7 cut(s) 52, 466, 1367, 1803, 1902, 2221, 2942
BspFNI CGCG 3 cut(s) 1340, 2179, 2854
BspHI TCATGA 2 cut(s) 1912, 1930
BspLI GGNNCC 8 cut(s) 28, 66, 310, 416, 1395, 1548, 2285, 2419
BspPI GGATC 2 cut(s) 1388, 1401
BspT107I GGYRCC 2 cut(s) 414, 2417
BspTNI GGTCTC 1 cut(s) 966
BsrBI CCGCTC 1 cut(s) 1006
BsrDI GCAATG 3 cut(s) 622, 2232, 2891
BsrFI RCCGGY 1 cut(s) 1171
BsrGI TGTACA 1 cut(s) 98
BsrI ACTGG 3 cut(s) 28, 355, 2516
BssAI RCCGGY 1 cut(s) 1171
BssMI GATC 5 cut(s) 16, 70, 1393, 1695, 2244
BssT1I CCWWGG 5 cut(s) 204, 714, 1611, 1785, 2593
Bst2UI CCWGG 8 cut(s) 623, 1207, 1233, 1622, 1744, 1902, 2899, 2925
Bst4CI ACNGT 6 cut(s) 380, 940, 1576, 1729, 1862, 1951
BstAPI GCANNNNNTGC 1 cut(s) 2015
BstAUI TGTACA 1 cut(s) 98
BstBAI YACGTR 2 cut(s) 734, 859
BstC8I GCNNGC 3 cut(s) 287, 510, 2342
BstDEI CTNAG 9 cut(s) 60, 474, 851, 1354, 1748, 1811, 1889, 2208, 2929
BstDSI CCRYGG 3 cut(s) 1611, 2177, 2462
BstENI CCTNNNNNAGG 1 cut(s) 2724
BstF5I GGATG 8 cut(s) 310, 593, 682, 1000, 1607, 1667, 2004, 2737
BstFNI CGCG 3 cut(s) 1340, 2179, 2854
BstHHI GCGC 2 cut(s) 868, 2856
BstKTI GATC 5 cut(s) 19, 73, 1396, 1698, 2247
BstMAI GTCTC 4 cut(s) 129, 154, 440, 966
BstMBI GATC 5 cut(s) 16, 70, 1393, 1695, 2244
BstMWI GCNNNNNNNGC 5 cut(s) 823, 835, 1217, 1343, 2015
BstNI CCWGG 8 cut(s) 623, 1207, 1233, 1622, 1744, 1902, 2899, 2925
BstNSI RCATGY 3 cut(s) 168, 175, 2344
BstPAI GACNNNNGTC 1 cut(s) 941
BstSCI CCNGG 8 cut(s) 621, 1205, 1231, 1620, 1742, 1900, 2897, 2923
BstSLI GKGCMC 2 cut(s) 2422, 2953
BstUI CGCG 3 cut(s) 1340, 2179, 2854
BstV1I GCAGC 5 cut(s) 714, 813, 1187, 1207, 1478
BstV2I GAAGAC 1 cut(s) 1194
BstX2I RGATCY 1 cut(s) 1393
BstXI CCANNNNNNTGG 1 cut(s) 1628
BstYI RGATCY 1 cut(s) 1393
BsuI GTATCC 1 cut(s) 2388
BtgI CCRYGG 3 cut(s) 1611, 2177, 2462
BtgZI GCGATG 1 cut(s) 1251
BtrI CACGTC 1 cut(s) 2128
BtsCI GGATG 8 cut(s) 310, 593, 682, 1000, 1607, 1667, 2004, 2737
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 9 cut(s) 57, 198, 245, 376, 881, 1725, 1897, 2254, 2996
Cac8I GCNNGC 3 cut(s) 287, 510, 2342
CciI TCATGA 2 cut(s) 1912, 1930
CfoI GCGC 2 cut(s) 868, 2856
Cfr10I RCCGGY 1 cut(s) 1171
Cfr13I GGNCC 4 cut(s) 309, 1618, 1717, 2255
Cfr42I CCGCGG 1 cut(s) 2180
CseI GACGC 1 cut(s) 1436
Csp6I GTAC 9 cut(s) 99, 876, 1078, 1084, 1226, 1730, 1876, 2296, 2712
CspCI CAANNNNNGTGG 2 cut(s) 90, 125
CviQI GTAC 9 cut(s) 99, 876, 1078, 1084, 1226, 1730, 1876, 2296, 2712
DdeI CTNAG 9 cut(s) 60, 474, 851, 1354, 1748, 1811, 1889, 2208, 2929
DpnI GATC 5 cut(s) 18, 72, 1395, 1697, 2246
DpnII GATC 5 cut(s) 16, 70, 1393, 1695, 2244
DrdI GACNNNNNNGTC 1 cut(s) 1021
DseDI GACNNNNNNGTC 1 cut(s) 1021
EaeI YGGCCR 4 cut(s) 994, 1043, 1308, 2895
Eco130I CCWWGG 5 cut(s) 204, 714, 1611, 1785, 2593
Eco31I GGTCTC 1 cut(s) 966
Eco32I GATATC 1 cut(s) 2070
Eco47I GGWCC 3 cut(s) 309, 1618, 1717
Eco57I CTGAAG 4 cut(s) 158, 269, 945, 2817
Eco88I CYCGRG 1 cut(s) 1679
EcoNI CCTNNNNNAGG 1 cut(s) 2724
EcoRI GAATTC 2 cut(s) 916, 1632
EcoRII CCWGG 8 cut(s) 621, 1205, 1231, 1620, 1742, 1900, 2897, 2923
EcoRV GATATC 1 cut(s) 2070
EcoT14I CCWWGG 5 cut(s) 204, 714, 1611, 1785, 2593
EcoT22I ATGCAT 1 cut(s) 2020
ErhI CCWWGG 5 cut(s) 204, 714, 1611, 1785, 2593
Esp3I CGTCTC 1 cut(s) 129
FalI AAGNNNNNCTT 2 cut(s) 2343, 2375
FaqI GGGAC 3 cut(s) 322, 2522, 2662
FauI CCCGC 1 cut(s) 2172
FauNDI CATATG 1 cut(s) 2100
FblI GTMKAC 2 cut(s) 44, 2959
Fnu4HI GCNGC 8 cut(s) 703, 827, 1046, 1176, 1221, 1338, 1492, 1967
FokI GGATG 8 cut(s) 317, 600, 689, 987, 1594, 1674, 2011, 2744
Fsp4HI GCNGC 8 cut(s) 703, 827, 1046, 1176, 1221, 1338, 1492, 1967
FspBI CTAG 5 cut(s) 371, 599, 650, 1536, 2919
FspI TGCGCA 1 cut(s) 867
GlaI GCGC 2 cut(s) 867, 2855
GluI GCNGC 8 cut(s) 703, 827, 1046, 1176, 1221, 1338, 1492, 1967
GsuI CTGGAG 4 cut(s) 33, 311, 1491, 2899
HapII CCGG 4 cut(s) 1172, 1391, 2112, 2335
HgaI GACGC 1 cut(s) 1436
HhaI GCGC 2 cut(s) 868, 2856
Hin6I GCGC 2 cut(s) 866, 2854
HinP1I GCGC 2 cut(s) 866, 2854
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HindIII AAGCTT 3 cut(s) 103, 283, 836
HpaII CCGG 4 cut(s) 1172, 1391, 2112, 2335
HphI GGTGA 2 cut(s) 110, 1023
Hpy166II GTNNAC 6 cut(s) 45, 118, 2205, 2296, 2803, 2960
Hpy8I GTNNAC 6 cut(s) 45, 118, 2205, 2296, 2803, 2960
HpyAV CCTTC 6 cut(s) 197, 224, 263, 1321, 1890, 2963
HpyCH4III ACNGT 6 cut(s) 380, 940, 1576, 1729, 1862, 1951
HpyCH4IV ACGT 8 cut(s) 80, 733, 858, 1155, 1228, 1874, 2127, 2976
HpyF10VI GCNNNNNNNGC 5 cut(s) 823, 835, 1217, 1343, 2015
HpyF3I CTNAG 9 cut(s) 60, 474, 851, 1354, 1748, 1811, 1889, 2208, 2929
HpySE526I ACGT 8 cut(s) 80, 733, 858, 1155, 1228, 1874, 2127, 2976
HspAI GCGC 2 cut(s) 866, 2854
KspI CCGCGG 1 cut(s) 2180
Kzo9I GATC 5 cut(s) 16, 70, 1393, 1695, 2244
LmnI GCTCC 5 cut(s) 292, 458, 680, 1011, 2722
Lsp1109I GCAGC 5 cut(s) 714, 813, 1187, 1207, 1478
LweI GCATC 5 cut(s) 403, 1645, 2027, 2247, 2818
MaeI CTAG 5 cut(s) 371, 599, 650, 1536, 2919
MaeII ACGT 8 cut(s) 80, 733, 858, 1155, 1228, 1874, 2127, 2976
MaeIII GTNAC 6 cut(s) 854, 934, 1029, 1126, 2537, 2734
MalI GATC 5 cut(s) 18, 72, 1395, 1697, 2246
MbiI CCGCTC 1 cut(s) 1006
MboI GATC 5 cut(s) 16, 70, 1393, 1695, 2244
MfeI CAATTG 5 cut(s) 336, 408, 513, 821, 2672
MflI RGATCY 1 cut(s) 1393
MhlI GDGCHC 2 cut(s) 2422, 2953
MlsI TGGCCA 1 cut(s) 2897
MluNI TGGCCA 1 cut(s) 2897
MlyI GAGTC 5 cut(s) 40, 376, 935, 1835, 1925
MmeI TCCRAC 1 cut(s) 2638
Mox20I TGGCCA 1 cut(s) 2897
Mph1103I ATGCAT 1 cut(s) 2020
MroXI GAANNNNTTC 4 cut(s) 213, 2187, 2573, 2630
MscI TGGCCA 1 cut(s) 2897
MslI CAYNNNNRTG 2 cut(s) 1805, 2946
Msp20I TGGCCA 1 cut(s) 2897
MspA1I CMGCKG 1 cut(s) 2179
MspI CCGG 4 cut(s) 1172, 1391, 2112, 2335
MspR9I CCNGG 8 cut(s) 623, 1207, 1233, 1622, 1744, 1902, 2899, 2925
MunI CAATTG 5 cut(s) 336, 408, 513, 821, 2672
Mva1269I GAATGC 2 cut(s) 1666, 1680
MvaI CCWGG 8 cut(s) 623, 1207, 1233, 1622, 1744, 1902, 2899, 2925
MvnI CGCG 3 cut(s) 1340, 2179, 2854
MwoI GCNNNNNNNGC 5 cut(s) 823, 835, 1217, 1343, 2015
NcoI CCATGG 1 cut(s) 1611
NdeI CATATG 1 cut(s) 2100
NdeII GATC 5 cut(s) 16, 70, 1393, 1695, 2244
NlaIV GGNNCC 8 cut(s) 28, 66, 310, 416, 1395, 1548, 2285, 2419
NmeAIII GCCGAG 1 cut(s) 765
NmuCI GTSAC 4 cut(s) 934, 1029, 1126, 2537
NsbI TGCGCA 1 cut(s) 867
NsiI ATGCAT 1 cut(s) 2020
NspI RCATGY 3 cut(s) 168, 175, 2344
OliI CACNNNNGTG 1 cut(s) 1805
PaeI GCATGC 1 cut(s) 2344
PagI TCATGA 2 cut(s) 1912, 1930
PciI ACATGT 1 cut(s) 164
PctI GAATGC 2 cut(s) 1666, 1680
PdmI GAANNNNTTC 4 cut(s) 213, 2187, 2573, 2630
Pfl23II CGTACG 1 cut(s) 1225
PflMI CCANNNNNTGG 1 cut(s) 2699
PfoI TCCNGGA 1 cut(s) 1620
PkrI GCNGC 8 cut(s) 704, 828, 1047, 1177, 1222, 1339, 1493, 1968
PleI GAGTC 5 cut(s) 40, 375, 934, 1834, 1924
PpsI GAGTC 5 cut(s) 40, 375, 934, 1834, 1924
Ppu21I YACGTR 2 cut(s) 734, 859
PscI ACATGT 1 cut(s) 164
PshAI GACNNNNGTC 1 cut(s) 941
PsiI TTATAA 1 cut(s) 2643
Psp1406I AACGTT 1 cut(s) 80
Psp6I CCWGG 8 cut(s) 621, 1205, 1231, 1620, 1742, 1900, 2897, 2923
PspGI CCWGG 8 cut(s) 621, 1205, 1231, 1620, 1742, 1900, 2897, 2923
PspLI CGTACG 1 cut(s) 1225
PspN4I GGNNCC 8 cut(s) 28, 66, 310, 416, 1395, 1548, 2285, 2419
PspPI GGNCC 4 cut(s) 309, 1618, 1717, 2255
PsuI RGATCY 1 cut(s) 1393
RsaI GTAC 9 cut(s) 100, 877, 1079, 1085, 1227, 1731, 1877, 2297, 2713
RsaNI GTAC 9 cut(s) 99, 876, 1078, 1084, 1226, 1730, 1876, 2296, 2712
RseI CAYNNNNRTG 2 cut(s) 1805, 2946
SacII CCGCGG 1 cut(s) 2180
SalI GTCGAC 1 cut(s) 43
SatI GCNGC 8 cut(s) 703, 827, 1046, 1176, 1221, 1338, 1492, 1967
Sau3AI GATC 5 cut(s) 16, 70, 1393, 1695, 2244
Sau96I GGNCC 4 cut(s) 309, 1618, 1717, 2255
ScaI AGTACT 1 cut(s) 2713
SchI GAGTC 5 cut(s) 40, 376, 935, 1835, 1925
ScrFI CCNGG 8 cut(s) 623, 1207, 1233, 1622, 1744, 1902, 2899, 2925
SduI GDGCHC 2 cut(s) 2422, 2953
SfaNI GCATC 5 cut(s) 403, 1645, 2027, 2247, 2818
Sfr303I CCGCGG 1 cut(s) 2180
SgrBI CCGCGG 1 cut(s) 2180
SinI GGWCC 3 cut(s) 309, 1618, 1717
SmiMI CAYNNNNRTG 2 cut(s) 1805, 2946
SmlI CTYRAG 4 cut(s) 655, 799, 1823, 1847
SmoI CTYRAG 4 cut(s) 655, 799, 1823, 1847
SphI GCATGC 1 cut(s) 2344
SsiI CCGC 9 cut(s) 582, 1004, 1046, 1338, 1527, 1966, 2177, 2179, 2852
SspI AATATT 2 cut(s) 222, 460
SspMI CTAG 5 cut(s) 371, 599, 650, 1536, 2919
StyD4I CCNGG 8 cut(s) 621, 1205, 1231, 1620, 1742, 1900, 2897, 2923
StyI CCWWGG 5 cut(s) 204, 714, 1611, 1785, 2593
TaaI ACNGT 6 cut(s) 380, 940, 1576, 1729, 1862, 1951
TaiI ACGT 8 cut(s) 83, 736, 861, 1158, 1231, 1877, 2130, 2979
TatI WGTACW 3 cut(s) 98, 875, 2711
TauI GCSGC 3 cut(s) 1048, 1340, 1969
TscAI CASTG 9 cut(s) 64, 205, 252, 383, 888, 1732, 1897, 2254, 3003
TseFI GTSAC 4 cut(s) 934, 1029, 1126, 2537
TseI GCWGC 5 cut(s) 702, 826, 1175, 1220, 1491
Tsp45I GTSAC 4 cut(s) 934, 1029, 1126, 2537
TspGWI ACGGA 3 cut(s) 831, 902, 2276
TspRI CASTG 9 cut(s) 64, 205, 252, 383, 888, 1732, 1897, 2254, 3003
Van91I CCANNNNNTGG 1 cut(s) 2699
VpaK11BI GGWCC 3 cut(s) 309, 1618, 1717
XagI CCTNNNNNAGG 1 cut(s) 2724
XceI RCATGY 3 cut(s) 168, 175, 2344
XcmI CCANNNNNNNNNTGG 1 cut(s) 1609
XmiI GTMKAC 2 cut(s) 44, 2959
XmnI GAANNNNTTC 4 cut(s) 213, 2187, 2573, 2630
XspI CTAG 5 cut(s) 371, 599, 650, 1536, 2919
ZrmI AGTACT 1 cut(s) 2713
Zsp2I ATGCAT 1 cut(s) 2020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.