Rmu_sc0001924.1_g000004

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001924.1
Physical Location & Seq
Forward (+)
13539 .. 19539
6001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001924.1_g000004.1.cds

Sequence Viewer

Length: 4839 bp
atgactaccaaaatagatctttcttcttcttcttcttcttcttcttgtcctcctctttctctatttcgtaaattgacatacgatgtgttcctcagtttcagaggtaaagatacccgcaaaaatttcacagaccatctttataccgctctcaaacagagaggaataaacacatttagagataatgaagaacttaagagtggggagtcaattgatctaaatctcttgaaagcaattgaagaatcaagatatgttgttgtggtgttttctcaaaactacgccgattcttcgtggtgtttggatgagcttgcaaaagtcgctgaatgcaggaaagccatgggacaaacagtcctccctgtgttctacgatgttgatccaaatgaggtgagaagacaacagggcaatcactttgagaaagcatttgagaagcatcaagagcggtttggagacaatccagataaattgcagaggtggaaagacgctcttgctgaagtaggcaatctctctggatggcatctgcaagatgggtacgaatccaaatttattcaagaaattgttgaaaagattttcaccgaattaaatcaaacaatctcaatatctgagggtttaattgggatggattctcacctgaatgaaatgctttcgtacttagacattgggtgtcccgatgttcgtatcatagggatttgtgggatgggcggtattggtaagacaactattgcacatgtggtttttgaaacggtaaaagctcattttgaaggttgcagctttcttgagaatgtgagagaagtactaactgaaaagcacggtgcagttcatttacaacagcaccttctttcgaatttgctgaaatgtagtgtaaatgtagagaacactaaaatgggaaaaagtataatgaggcaaagactacgtactaaaatggttcttatcattcttgatgatgtggaccaagaagaacaattggaagcattgtgtgatagggaatcgtttggtccagggagtagaatcatcataacttctagaaatgaacatttgctcagtgtagttgaaggagataaagtatataaggtgaattcattaactgatgctgaagctcttgagctcttccgattgaaagcctttaagaaagaccagctggttggggaagattttctcaagctatccaaggaatttttgaaatatgctaatggccttccattagctattaaagttttgggttcctctgttcgtggtaaaaatgtaaaattatggtctagtgcattggatagactaaaaaacaatcctcaaaaaaaaattattgatgttcttaaagttagttttgatggattagaagaaaccgaaaaaaaaatatttttggacatcgcatgtttctttaaaggagggtacatagatcatgtaacaagagtactacaaggtagtgaccactgtccggacattgatatagaagttcttgtagataaatctttggtaactctgtttggaagaagattggggatgcatgacttggtacaagaattgggtcgggaaattgttcgtcaagaatgtcgtgaagagcctggaaaacgtagcaggttgtggcttgccaatgaaatcatccatgtacttggtcggaataaggcgaccagtgcagttcaaagcatattcctccaatgtcgaacagaagacgatgttgtccactcaagtgatgatgctttttcaaatatggacagattgagattgctcaagatttgtaatttgaatttctctggaaacatcagatatctttcgaatgagttgcagtatcttgaatggcataaatatcctttggattttttcccgtcagactttcaaccagataaacttactgtagttcgcatgtatcgtagccgcatcaaacaactatggaagggaaaaaaaggatggagcatgctgcggcttatagatctgagtggttcacaatacttgatgtcgactccagacttcactgaggttcctgatcttgaagtgctggtgcttcaaaattgcacaagcttggtggaggttcacccatctctcggatttctgaagaaacttggctatttggatatgaaaaattgcaagtctattgagagcattccacctttcactaccttggaatcccttcaaatattgaggctttcactctgttctggactgaagaagtttccggaaattgaaggaaatatggaaagcttgctggagctttatttggataggaccagcattgaggaattgcctccatcaattgaacgtttgactggtcttaccacgttgaatctaacagactgtaaaaaccttttgcatcttcccaataccatcgggtgcttgacatctttgaaaagtctccgtctaacaggttgctccaaaattgaggggatacctgggaatctgaatagtatgaaatgtctagagatgcttacaattggtggaacatccataagggagttatctttcatcgtaggcatgaagaatctacagtatctatgcttccgaggatataaatgtctagtttcagaatcatttaatgttttggcttcgttatcgagtttgatagagctagacttgagtgattgccatctgatggatggagcaattctcaatgatcttggaagcctaatctccttaagaatgttagatttaagtggtaattgctttgtacggttacctgatagtatctctcaactctcaaagctcgagactctccgcttgaataattgcagacagcttcaattgctacctaagaagcttccgttaagtcttcgaaacatctatgcacacgattgtacttcactgacggattacccaaatcaaatcaaagtattgaattcatcggattcgggagtgactattgtcaattccctcaattcttcagcacttaaagtttcagaatctagagcggtcatttatccaagaaatgagggggaatctacagagctgcttttgacacatgagaatacagaggggaaacaagttgatcattatttgccactgagaagtgtagcacatcaaagagaagaagtgtcttcctggtcaaatttcgctgttgtacttcctacagatgaaattccagagtggttcagcactatatctaccagaaatgccatatcaatctcgatgcctcaaaatctgaccgatgataacaagtggaacggattggccgcgtgtgctatattctcagtcaaggggcatgctgctctctctgttattgaaccggatcctgaattttctaattactcgtatcagatgacattggaaaccgatgctgggcgtctgaaaccatatgtgttggataggaaagaccttcttccccctcttggatcaagttctcatctgcttatgattttctatatatctagttcaaagaagtatccacaatgggaattagacgaatcaactgtggtgagtgcgacgtttgaaaccaccaatccatccatggttgtccagaaatgtggaatcggtctagtctatgagcaagatgctggaatgtattccagaatggtcgatggggatcaaccgatttgtctgaataaagttgaggacgccgcctctgtacgggagtctgcctggattggtcaatcttcgaaatgggaaaaattcgttccacccttggaggaagaatccacactagtgctgagaaagaacctcgagtctgtccttccaagataccttgaggaactaaaccattattctgcaacgtacaaattcaacctcagaggaagcccagggtggtttcatcagtcgtttgcctgtaatacgaggtcaattttgaccggagggtcaatcaagttgcctcaaaatctacacaagagcaagaagtggatgggatttgcaatatacgcatcagttgtagaggaagtggggcagacgatgaaagaggaaaactatcgggtatatgttagtctaataactggggataaatctcgtaagagtatgtcccgagaacttgagcacgtcaggccattatcagaagaacatcatcaactactggttatttacataccgcgggcacagatttccgaagcattgttcactcagacattaacaactgcaatggacttttacatacgtatcagtgatacccctcatgtaaaggtccaaagatgtgggttccgtattgtgtaccaggaagatatacaagggtttgctgatacaattatctggtgcatgcagagggaagattctcttgaatttcacgataagttggtggtagaagaatggatagaattgatacaattgcaaggtgcccatttagacagaatgacaaaacaagattccagaaccccatgggaaaaacaatttgaattgcactcacaaaaatatagaaattgggactggtctgaccctcgtcctgtttcttgtcacatcgatggagctgaaattttcaagtcaaaatggttcatgcctttcatcaaccatggcaactatgcagaaatccaactgcctctgaacgtgttcgatgataataattggttggggtttgccgtatgttctgggttgtcccacgaccaatatccaaacattagtcttggcagtactgcccctgattcagagaatgttatgcatagtcttcgtctgcactctgatgctgcttggcacggcttatttggtctcaccatgaaggcatattttaggatactcgagccattggaatacgatgcaactttgttcttttatataccacgcactaattgtcttagtaagatgtggaggcaatgcaaattggccaaggtaaccatgtggtgctctagcccatgcgtagctgtgcatagttgtggccttcgtctagtatttaaggaggacgttgaacatcttgtagagacactgaccctcgccgaattacattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1612

Amino Acids

183.45

Weight (kDa)

5.97

Isoelectric Point (pI)

43.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1667, 3769
Acc36I ACCTGC 1 cut(s) 1557
AccB1I GGYRCC 1 cut(s) 4235
AccB7I CCANNNNNTGG 1 cut(s) 2575
AccBSI CCGCTC 3 cut(s) 146, 436, 2891
AccI GTMKAC 1 cut(s) 1946
AccII CGCG 2 cut(s) 3155, 3997
AccIII TCCGGA 2 cut(s) 1426, 2161
AclI AACGTT 1 cut(s) 2245
AclWI GGATC 5 cut(s) 365, 3203, 3216, 3319, 3510
AcoI YGGCCR 2 cut(s) 3150, 4716
AcuI CTGAAG 5 cut(s) 507, 1107, 2060, 2171, 2847
AcyI GRCGYC 2 cut(s) 3262, 3534
AfiI CCNNNNNNNGG 6 cut(s) 1426, 2030, 2575, 3258, 3308, 3546
AflII CTTAAG 2 cut(s) 191, 2617
AflIII ACRYGT 2 cut(s) 721, 4443
AhdI GACNNNNNGTC 1 cut(s) 344
AhlI ACTAGT 1 cut(s) 3619
AjiI CACGTC 1 cut(s) 3946
AjnI CCWGG 7 cut(s) 991, 1552, 2374, 3020, 3557, 3715, 4116
AleI CACNNNNGTG 2 cut(s) 1677, 3620
Alw21I GWGCWC 3 cut(s) 1101, 3945, 4739
Alw26I GTCTC 5 cut(s) 438, 2342, 2684, 4607, 4805
AlwI GGATC 5 cut(s) 365, 3203, 3216, 3319, 3510
Ama87I CYCGRG 4 cut(s) 2687, 3638, 3930, 4631
Aor13HI TCCGGA 2 cut(s) 1426, 2161
AoxI GGCC 5 cut(s) 1186, 3150, 3950, 4716, 4768
ApeKI GCWGC 5 cut(s) 762, 1906, 2929, 3185, 4580
Asp700I GAANNNNTTC 5 cut(s) 1146, 1527, 2115, 3481, 4445
AspS9I GGNCC 4 cut(s) 943, 989, 2211, 4087
AsuHPI GGTGA 7 cut(s) 394, 559, 614, 1078, 2012, 3406, 4597
AsuII TTCGAA 4 cut(s) 836, 1763, 2755, 3575
AvaI CYCGRG 4 cut(s) 2687, 3638, 3930, 4631
AvaII GGWCC 4 cut(s) 943, 989, 2211, 4087
BaeGI GKGCMC 2 cut(s) 4003, 4240
BaeI ACNNNNGTAYC 2 cut(s) 4045, 4078
BalI TGGCCA 1 cut(s) 4718
BamHI GGATCC 1 cut(s) 3208
BanI GGYRCC 1 cut(s) 4235
BanII GRGCYC 1 cut(s) 1101
BarI GAAGNNNNNNTAC 2 cut(s) 2465, 2497
BbsI GAAGAC 5 cut(s) 394, 1665, 2744, 3009, 4553
Bbv12I GWGCWC 3 cut(s) 1101, 3945, 4739
BbvI GCAGC 5 cut(s) 774, 1893, 2916, 3172, 4567
BceAI ACGGC 2 cut(s) 4460, 4606
BcgI CGANNNNNNTGC 4 cut(s) 1753, 1787, 4544, 4578
BciT130I CCWGG 7 cut(s) 993, 1554, 2376, 3022, 3559, 3717, 4118
BciVI GTATCC 3 cut(s) 2364, 3372, 4620
BclI TGATCA 1 cut(s) 2968
BcoDI GTCTC 5 cut(s) 438, 2342, 2684, 4607, 4805
BcuI ACTAGT 1 cut(s) 3619
BfmI CTRYAG 4 cut(s) 1842, 2468, 2922, 3048
BfrI CTTAAG 2 cut(s) 191, 2617
BfuAI ACCTGC 1 cut(s) 1557
BfuI GTATCC 3 cut(s) 2364, 3372, 4620
BglII AGATCT 2 cut(s) 16, 1918
BisI GCNGC 9 cut(s) 763, 1864, 1907, 1910, 2930, 3153, 3186, 3537, 4581
BlsI GCNGC 9 cut(s) 764, 1865, 1908, 1911, 2931, 3154, 3187, 3538, 4582
BmcAI AGTACT 3 cut(s) 789, 1404, 4528
Bme1390I CCNGG 7 cut(s) 993, 1554, 2376, 3022, 3559, 3717, 4118
Bme18I GGWCC 4 cut(s) 943, 989, 2211, 4087
BmeRI GACNNNNNGTC 1 cut(s) 344
BmeT110I CYCGRG 4 cut(s) 2687, 3638, 3930, 4631
BmgBI CACGTC 1 cut(s) 3946
BmgT120I GGNCC 4 cut(s) 943, 989, 2211, 4087
BmiI GGNNCC 5 cut(s) 1216, 1968, 3210, 4103, 4237
BmrFI CCNGG 7 cut(s) 993, 1554, 2376, 3022, 3559, 3717, 4118
BmrI ACTGGG 1 cut(s) 3912
BmuI ACTGGG 1 cut(s) 3912
BoxI GACNNNNGTC 3 cut(s) 1422, 2843, 4338
BpiI GAAGAC 5 cut(s) 394, 1665, 2744, 3009, 4553
BplI GAGNNNNNCTC 2 cut(s) 2574, 2606
BpmI CTGGAG 2 cut(s) 1935, 2213
Bpu14I TTCGAA 4 cut(s) 836, 1763, 2755, 3575
BpuEI CTTGAG 8 cut(s) 791, 1115, 1136, 1660, 1703, 2578, 3683, 3959
Bsa29I ATCGAT 1 cut(s) 4359
BsaAI YACGTR 2 cut(s) 908, 4061
BsaBI GATNNNNATC 4 cut(s) 216, 369, 2568, 3501
BsaHI GRCGYC 2 cut(s) 3262, 3534
BsaI GGTCTC 1 cut(s) 4607
BsaWI WCCGGW 4 cut(s) 1426, 2161, 3205, 3764
BsaXI ACNNNNNCTCC 2 cut(s) 1041, 1071
Bsc4I CCNNNNNNNGG 6 cut(s) 1426, 2030, 2575, 3258, 3308, 3546
Bse1I ACTGG 5 cut(s) 1620, 2257, 3907, 3984, 4331
Bse3DI GCAATG 2 cut(s) 4050, 4712
Bse8I GATNNNNATC 4 cut(s) 216, 369, 2568, 3501
BseAI TCCGGA 2 cut(s) 1426, 2161
BseBI CCWGG 7 cut(s) 993, 1554, 2376, 3022, 3559, 3717, 4118
BseCI ATCGAT 1 cut(s) 4359
BseJI GATNNNNATC 4 cut(s) 216, 369, 2568, 3501
BseLI CCNNNNNNNGG 6 cut(s) 1426, 2030, 2575, 3258, 3308, 3546
BseMI GCAATG 2 cut(s) 4050, 4712
BseNI ACTGG 5 cut(s) 1620, 2257, 3907, 3984, 4331
BseRI GAGGAG 1 cut(s) 42
BseSI GKGCMC 2 cut(s) 4003, 4240
BseXI GCAGC 5 cut(s) 774, 1893, 2916, 3172, 4567
BseYI CCCAGC 1 cut(s) 3257
BsgI GTGCAG 3 cut(s) 828, 1644, 4553
Bsh1236I CGCG 2 cut(s) 3155, 3997
BshFI GGCC 5 cut(s) 1188, 3152, 3952, 4718, 4770
BshNI GGYRCC 1 cut(s) 4235
BshVI ATCGAT 1 cut(s) 4359
BsiHKAI GWGCWC 3 cut(s) 1101, 3945, 4739
BsiHKCI CYCGRG 4 cut(s) 2687, 3638, 3930, 4631
BsiSI CCGG 4 cut(s) 1427, 2162, 3206, 3765
BslFI GGGAC 5 cut(s) 351, 645, 3913, 4337, 4477
BslI CCNNNNNNNGG 6 cut(s) 1426, 2030, 2575, 3258, 3308, 3546
BsmAI GTCTC 5 cut(s) 438, 2342, 2684, 4607, 4805
BsmFI GGGAC 5 cut(s) 351, 645, 3913, 4337, 4477
BsmI GAATGC 2 cut(s) 326, 2088
BsnI GGCC 5 cut(s) 1188, 3152, 3952, 4718, 4770
Bso31I GGTCTC 1 cut(s) 4607
BsoBI CYCGRG 4 cut(s) 2687, 3638, 3930, 4631
Bsp119I TTCGAA 4 cut(s) 836, 1763, 2755, 3575
Bsp1286I GDGCHC 5 cut(s) 1101, 3945, 4003, 4240, 4739
Bsp13I TCCGGA 2 cut(s) 1426, 2161
Bsp19I CCATGG 4 cut(s) 333, 3426, 4277, 4408
BspANI GGCC 5 cut(s) 1188, 3152, 3952, 4718, 4770
BspDI ATCGAT 1 cut(s) 4359
BspEI TCCGGA 2 cut(s) 1426, 2161
BspFNI CGCG 2 cut(s) 3155, 3997
BspLI GGNNCC 5 cut(s) 1216, 1968, 3210, 4103, 4237
BspMI ACCTGC 1 cut(s) 1557
BspPI GGATC 5 cut(s) 365, 3203, 3216, 3319, 3510
BspQI GCTCTTC 2 cut(s) 1106, 1542
BspT104I TTCGAA 4 cut(s) 836, 1763, 2755, 3575
BspT107I GGYRCC 1 cut(s) 4235
BspTI CTTAAG 2 cut(s) 191, 2617
BspTNI GGTCTC 1 cut(s) 4607
BsrBI CCGCTC 3 cut(s) 146, 436, 2891
BsrDI GCAATG 2 cut(s) 4050, 4712
BsrI ACTGG 5 cut(s) 1620, 2257, 3907, 3984, 4331
BssNI GRCGYC 2 cut(s) 3262, 3534
BssT1I CCWWGG 8 cut(s) 333, 1161, 2106, 3426, 3600, 4277, 4408, 4719
Bst2UI CCWGG 7 cut(s) 993, 1554, 2376, 3022, 3559, 3717, 4118
Bst4CI ACNGT 9 cut(s) 346, 739, 806, 1424, 1843, 2282, 2472, 2655, 3391
Bst6I CTCTTC 2 cut(s) 1106, 1542
BstACI GRCGYC 2 cut(s) 3262, 3534
BstAFI CTTAAG 2 cut(s) 191, 2617
BstBAI YACGTR 2 cut(s) 908, 4061
BstBI TTCGAA 4 cut(s) 836, 1763, 2755, 3575
BstC8I GCNNGC 7 cut(s) 306, 1578, 1904, 2189, 3183, 3999, 4160
BstDSI CCRYGG 5 cut(s) 333, 3426, 3995, 4277, 4408
BstEII GGTNACC 2 cut(s) 2655, 4723
BstFNI CGCG 2 cut(s) 3155, 3997
BstMAI GTCTC 5 cut(s) 438, 2342, 2684, 4607, 4805
BstMWI GCNNNNNNNGC 7 cut(s) 314, 433, 1622, 2725, 3158, 3830, 3949
BstNI CCWGG 7 cut(s) 993, 1554, 2376, 3022, 3559, 3717, 4118
BstNSI RCATGY 6 cut(s) 725, 1365, 1855, 1906, 3185, 4162
BstPAI GACNNNNGTC 3 cut(s) 1422, 2843, 4338
BstPI GGTNACC 2 cut(s) 2655, 4723
BstSCI CCNGG 7 cut(s) 991, 1552, 2374, 3020, 3557, 3715, 4116
BstSFI CTRYAG 4 cut(s) 1842, 2468, 2922, 3048
BstSLI GKGCMC 2 cut(s) 4003, 4240
BstSNI TACGTA 2 cut(s) 908, 4061
BstUI CGCG 2 cut(s) 3155, 3997
BstV1I GCAGC 5 cut(s) 774, 1893, 2916, 3172, 4567
BstV2I GAAGAC 5 cut(s) 394, 1665, 2744, 3009, 4553
BstX2I RGATCY 3 cut(s) 16, 1918, 3208
BstXI CCANNNNNNTGG 4 cut(s) 1136, 1601, 3443, 4097
BstYI RGATCY 3 cut(s) 16, 1918, 3208
Bsu15I ATCGAT 1 cut(s) 4359
BsuI GTATCC 3 cut(s) 2364, 3372, 4620
BsuRI GGCC 5 cut(s) 1188, 3152, 3952, 4718, 4770
BsuTUI ATCGAT 1 cut(s) 4359
BtgI CCRYGG 5 cut(s) 333, 3426, 3995, 4277, 4408
BtgZI GCGATG 1 cut(s) 1342
BtrI CACGTC 1 cut(s) 3946
BtsIMutI CAGTG 8 cut(s) 1042, 1420, 1627, 1959, 2783, 2981, 4072, 4814
BveI ACCTGC 1 cut(s) 1557
Cac8I GCNNGC 7 cut(s) 306, 1578, 1904, 2189, 3183, 3999, 4160
Cfr13I GGNCC 4 cut(s) 943, 989, 2211, 4087
Cfr42I CCGCGG 1 cut(s) 3998
ClaI ATCGAT 1 cut(s) 4359
CseI GACGC 3 cut(s) 485, 3251, 3542
CspCI CAANNNNNGTGG 2 cut(s) 1992, 2027
DraI TTTAAA 1 cut(s) 1372
DrdI GACNNNNNNGTC 2 cut(s) 1667, 3769
DriI GACNNNNNGTC 1 cut(s) 344
DseDI GACNNNNNNGTC 2 cut(s) 1667, 3769
EaeI YGGCCR 2 cut(s) 3150, 4716
Eam1104I CTCTTC 2 cut(s) 1106, 1542
Eam1105I GACNNNNNGTC 1 cut(s) 344
EarI CTCTTC 2 cut(s) 1106, 1542
Ecl136II GAGCTC 1 cut(s) 1099
Eco105I TACGTA 2 cut(s) 908, 4061
Eco130I CCWWGG 8 cut(s) 333, 1161, 2106, 3426, 3600, 4277, 4408, 4719
Eco24I GRGCYC 1 cut(s) 1101
Eco31I GGTCTC 1 cut(s) 4607
Eco32I GATATC 1 cut(s) 1757
Eco47I GGWCC 4 cut(s) 943, 989, 2211, 4087
Eco53kI GAGCTC 1 cut(s) 1099
Eco57I CTGAAG 5 cut(s) 507, 1107, 2060, 2171, 2847
Eco88I CYCGRG 4 cut(s) 2687, 3638, 3930, 4631
Eco91I GGTNACC 2 cut(s) 2655, 4723
EcoICRI GAGCTC 1 cut(s) 1099
EcoO65I GGTNACC 2 cut(s) 2655, 4723
EcoRI GAATTC 2 cut(s) 1069, 2818
EcoRII CCWGG 7 cut(s) 991, 1552, 2374, 3020, 3557, 3715, 4116
EcoRV GATATC 1 cut(s) 1757
EcoT14I CCWWGG 8 cut(s) 333, 1161, 2106, 3426, 3600, 4277, 4408, 4719
EcoT22I ATGCAT 2 cut(s) 1497, 4557
EcoT38I GRGCYC 1 cut(s) 1101
ErhI CCWWGG 8 cut(s) 333, 1161, 2106, 3426, 3600, 4277, 4408, 4719
FalI AAGNNNNNCTT 6 cut(s) 465, 497, 3282, 3314, 4161, 4193
FaqI GGGAC 5 cut(s) 351, 645, 3913, 4337, 4477
FauI CCCGC 2 cut(s) 122, 3990
FauNDI CATATG 1 cut(s) 3274
FbaI TGATCA 1 cut(s) 2968
FblI GTMKAC 1 cut(s) 1946
Fnu4HI GCNGC 9 cut(s) 763, 1864, 1907, 1910, 2930, 3153, 3186, 3537, 4581
FriOI GRGCYC 1 cut(s) 1101
Fsp4HI GCNGC 9 cut(s) 763, 1864, 1907, 1910, 2930, 3153, 3186, 3537, 4581
GluI GCNGC 9 cut(s) 763, 1864, 1907, 1910, 2930, 3153, 3186, 3537, 4581
GsaI CCCAGC 1 cut(s) 3261
GsuI CTGGAG 2 cut(s) 1935, 2213
HaeIII GGCC 5 cut(s) 1188, 3152, 3952, 4718, 4770
HapII CCGG 4 cut(s) 1427, 2162, 3206, 3765
HgaI GACGC 3 cut(s) 485, 3251, 3542
Hin1I GRCGYC 2 cut(s) 3262, 3534
HincII GTYRAC 1 cut(s) 1947
HindII GTYRAC 1 cut(s) 1947
HindIII AAGCTT 3 cut(s) 2005, 2185, 2738
HpaII CCGG 4 cut(s) 1427, 2162, 3206, 3765
HphI GGTGA 7 cut(s) 394, 559, 614, 1078, 2012, 3406, 4597
Hpy166II GTNNAC 7 cut(s) 943, 1672, 1931, 1947, 2020, 4023, 4114
Hpy8I GTNNAC 7 cut(s) 943, 1672, 1931, 1947, 2020, 4023, 4114
Hpy99I CGWCG 1 cut(s) 3406
HpyCH4III ACNGT 9 cut(s) 346, 739, 806, 1424, 1843, 2282, 2472, 2655, 3391
HpyF10VI GCNNNNNNNGC 7 cut(s) 314, 433, 1622, 2725, 3158, 3830, 3949
Hsp92I GRCGYC 2 cut(s) 3262, 3534
Kpn2I TCCGGA 2 cut(s) 1426, 2161
Ksp22I TGATCA 1 cut(s) 2968
KspI CCGCGG 1 cut(s) 3998
LguI GCTCTTC 2 cut(s) 1106, 1542
LmnI GCTCC 5 cut(s) 1899, 2194, 2360, 2582, 4364
Lsp1109I GCAGC 5 cut(s) 774, 1893, 2916, 3172, 4567
MaeIII GTNAC 7 cut(s) 1393, 1415, 1465, 2655, 2836, 4352, 4723
MbiI CCGCTC 3 cut(s) 146, 436, 2891
MfeI CAATTG 7 cut(s) 207, 231, 956, 2238, 2415, 2723, 4226
MflI RGATCY 3 cut(s) 16, 1918, 3208
MhlI GDGCHC 5 cut(s) 1101, 3945, 4003, 4240, 4739
MlsI TGGCCA 1 cut(s) 4718
MluNI TGGCCA 1 cut(s) 4718
MlyI GAGTC 5 cut(s) 212, 1942, 2686, 3560, 3650
MmeI TCCRAC 3 cut(s) 1586, 3261, 4453
Mox20I TGGCCA 1 cut(s) 4718
Mph1103I ATGCAT 2 cut(s) 1497, 4557
MroI TCCGGA 2 cut(s) 1426, 2161
MroXI GAANNNNTTC 5 cut(s) 1146, 1527, 2115, 3481, 4445
MscI TGGCCA 1 cut(s) 4718
MslI CAYNNNNRTG 7 cut(s) 627, 875, 1677, 3620, 4359, 4575, 4764
Msp20I TGGCCA 1 cut(s) 4718
MspA1I CMGCKG 2 cut(s) 1132, 3997
MspCI CTTAAG 2 cut(s) 191, 2617
MspI CCGG 4 cut(s) 1427, 2162, 3206, 3765
MspR9I CCNGG 7 cut(s) 993, 1554, 2376, 3022, 3559, 3717, 4118
MunI CAATTG 7 cut(s) 207, 231, 956, 2238, 2415, 2723, 4226
Mva1269I GAATGC 2 cut(s) 326, 2088
MvaI CCWGG 7 cut(s) 993, 1554, 2376, 3022, 3559, 3717, 4118
MvnI CGCG 2 cut(s) 3155, 3997
MwoI GCNNNNNNNGC 7 cut(s) 314, 433, 1622, 2725, 3158, 3830, 3949
NcoI CCATGG 4 cut(s) 333, 3426, 4277, 4408
NdeI CATATG 1 cut(s) 3274
NlaIV GGNNCC 5 cut(s) 1216, 1968, 3210, 4103, 4237
NmuCI GTSAC 3 cut(s) 1415, 2836, 4352
NsiI ATGCAT 2 cut(s) 1497, 4557
NspI RCATGY 6 cut(s) 725, 1365, 1855, 1906, 3185, 4162
NspV TTCGAA 4 cut(s) 836, 1763, 2755, 3575
OliI CACNNNNGTG 2 cut(s) 1677, 3620
PaeI GCATGC 3 cut(s) 1906, 3185, 4162
PaeR7I CTCGAG 3 cut(s) 2687, 3638, 4631
PasI CCCWGGG 1 cut(s) 3716
PciI ACATGT 1 cut(s) 721
PciSI GCTCTTC 2 cut(s) 1106, 1542
PcsI WCGNNNNNNNCGW 1 cut(s) 1855
PctI GAATGC 2 cut(s) 326, 2088
PdmI GAANNNNTTC 5 cut(s) 1146, 1527, 2115, 3481, 4445
PflMI CCANNNNNTGG 1 cut(s) 2575
PkrI GCNGC 9 cut(s) 764, 1865, 1908, 1911, 2931, 3154, 3187, 3538, 4582
PleI GAGTC 5 cut(s) 211, 1942, 2686, 3559, 3649
PpsI GAGTC 5 cut(s) 211, 1942, 2686, 3559, 3649
Ppu21I YACGTR 2 cut(s) 908, 4061
PscI ACATGT 1 cut(s) 721
PshAI GACNNNNGTC 3 cut(s) 1422, 2843, 4338
Psp124BI GAGCTC 1 cut(s) 1101
Psp1406I AACGTT 1 cut(s) 2245
Psp6I CCWGG 7 cut(s) 991, 1552, 2374, 3020, 3557, 3715, 4116
PspEI GGTNACC 2 cut(s) 2655, 4723
PspFI CCCAGC 1 cut(s) 3257
PspGI CCWGG 7 cut(s) 991, 1552, 2374, 3020, 3557, 3715, 4116
PspN4I GGNNCC 5 cut(s) 1216, 1968, 3210, 4103, 4237
PspPI GGNCC 4 cut(s) 943, 989, 2211, 4087
PspXI VCTCGAGB 2 cut(s) 3638, 4631
PsuI RGATCY 3 cut(s) 16, 1918, 3208
PvuII CAGCTG 1 cut(s) 1132
RseI CAYNNNNRTG 7 cut(s) 627, 875, 1677, 3620, 4359, 4575, 4764
SacI GAGCTC 1 cut(s) 1101
SacII CCGCGG 1 cut(s) 3998
SalI GTCGAC 1 cut(s) 1945
SapI GCTCTTC 2 cut(s) 1106, 1542
SatI GCNGC 9 cut(s) 763, 1864, 1907, 1910, 2930, 3153, 3186, 3537, 4581
Sau96I GGNCC 4 cut(s) 943, 989, 2211, 4087
ScaI AGTACT 3 cut(s) 789, 1404, 4528
SchI GAGTC 5 cut(s) 212, 1942, 2686, 3560, 3650
ScrFI CCNGG 7 cut(s) 993, 1554, 2376, 3022, 3559, 3717, 4118
SduI GDGCHC 5 cut(s) 1101, 3945, 4003, 4240, 4739
SfcI CTRYAG 4 cut(s) 1842, 2468, 2922, 3048
Sfr274I CTCGAG 3 cut(s) 2687, 3638, 4631
Sfr303I CCGCGG 1 cut(s) 3998
SfuI TTCGAA 4 cut(s) 836, 1763, 2755, 3575
SgrBI CCGCGG 1 cut(s) 3998
SinI GGWCC 4 cut(s) 943, 989, 2211, 4087
SlaI CTCGAG 3 cut(s) 2687, 3638, 4631
SmiMI CAYNNNNRTG 7 cut(s) 627, 875, 1677, 3620, 4359, 4575, 4764
SnaBI TACGTA 2 cut(s) 908, 4061
SpeI ACTAGT 1 cut(s) 3619
SphI GCATGC 3 cut(s) 1906, 3185, 4162
SspI AATATT 2 cut(s) 1347, 2124
SstI GAGCTC 1 cut(s) 1101
StyD4I CCNGG 7 cut(s) 991, 1552, 2374, 3020, 3557, 3715, 4116
StyI CCWWGG 8 cut(s) 333, 1161, 2106, 3426, 3600, 4277, 4408, 4719
TaaI ACNGT 9 cut(s) 346, 739, 806, 1424, 1843, 2282, 2472, 2655, 3391
TaqII GACCGA 2 cut(s) 3140, 3440
TatI WGTACW 6 cut(s) 787, 1402, 1597, 2777, 3040, 4526
TauI GCSGC 4 cut(s) 1866, 1912, 3155, 3539
TscAI CASTG 8 cut(s) 1042, 1427, 1627, 1966, 2790, 2988, 4072, 4821
TseFI GTSAC 3 cut(s) 1415, 2836, 4352
TseI GCWGC 5 cut(s) 762, 1906, 2929, 3185, 4580
Tsp45I GTSAC 3 cut(s) 1415, 2836, 4352
TspGWI ACGGA 5 cut(s) 2330, 2733, 2804, 3159, 4094
TspRI CASTG 8 cut(s) 1042, 1427, 1627, 1966, 2790, 2988, 4072, 4821
Van91I CCANNNNNTGG 1 cut(s) 2575
Vha464I CTTAAG 2 cut(s) 191, 2617
VpaK11BI GGWCC 4 cut(s) 943, 989, 2211, 4087
XbaI TCTAGA 3 cut(s) 1016, 2401, 2885
XceI RCATGY 6 cut(s) 725, 1365, 1855, 1906, 3185, 4162
XcmI CCANNNNNNNNNTGG 2 cut(s) 2576, 3424
XhoI CTCGAG 3 cut(s) 2687, 3638, 4631
XmiI GTMKAC 1 cut(s) 1946
XmnI GAANNNNTTC 5 cut(s) 1146, 1527, 2115, 3481, 4445
ZrmI AGTACT 3 cut(s) 789, 1404, 4528
Zsp2I ATGCAT 2 cut(s) 1497, 4557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.