RLG00000001954

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
23440272 .. 23447167
6896 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001954

Sequence Viewer

Length: 2664 bp
ATGATCACCCACACAGATATTCCTTCTTCTTCTTCCTCTCCTCCTACGATCCCTCGATGGACGTACGATGTTTTCCTCAGTTTCAGGGGCGAAGATACCCGAAAAACTTTTACTGACCATCTCTACGCCAGTCTTAAACTGAAAGGTATAATCACGTTCAGAGACGATGAGGGACTTGAGAGAGGAAAAGCCATTTCCCCAAAGCTGTTGAAAGCCATTGAAGAATCAAGATTCGTCATTGCCATCTTTTCAAGAAAGTATGCTGATTCAAGATGGTGCTTGGATGAGCTCGCAAAGGCTGTTGATTGTATGAACATGTTGGGACAAACGATCCTCCCAGTCTTTTACCATGTGGATCCATCTGAGGTGAGAAAACAAACAGGAAAATTCGGCCAAGACTTGTGCATGCATCAAGAACGCTTTAAAGACAAAATAGAGCAGGTGAATAGGTGGAGAGCTGCTCTTACTCAAGTCGCCAATCTCTCTGGATGGCATTTGCAGGATGGTTCTATCGACTTCAACTATGAAAATCTTCTCTTTTCTATATTCTATCAGATTATAAGAGGAATGACAACTATGAGTTCATTGATTTCATCCAAGCATAAAAAATATTCCACTTCCTCACCAAGACAAATCTCATATCATTCCAGAACATGGATTCAGTCGACTGTCCTTGGACGTGGTTTCTTTAGTTTTAGCCATCAACCTCAAGAATGTAAACCAGTTGATGATTTATCAATGCCAAATCAAGTGCTTCAGAAAGACCTTGAAGTATTGGATTACAAGTCTTGTCCCCTGAGTTCCGGCTGTGAAGAAAATGAAATTCCAGAGTGGTTTAGCAATATAGATAATGGCAGCTCCATCGGAATCTCGATACCTGCAGGACTCAAAGATGACGAGCAATGGATGGGGGTTTCTGCTGTTTTCTTAATCAAGGGGCATCCTCATTTCTCCAACATCGAACCAGAATCAGAAACACCTAATTACTTCTATAAATGCACAGTAGTAACTCAAGAATGTCAAGTGGAACCTGTTCTCCTTGAATGGAACCATCTCAACTGCATTCGATATAGTTCTCATTTTCTTTGCCTTTTCTATGTACCTTGCCAATTCTTTCCCAAAAGGTTAAATGAATCGAGTGTAATGTGGGCTGTCTTTGAGACCAATAACCCATGCATGGAGGTCCAGAAATGTGGGATTCGTCTACTATTCGAGCAAGGTGTTGCAGGGTTTATCCAGACATTCATGCCTCCCACTCTTGTTATTGGAGGTCGTACGCATGATCATGACCCTCTGCTTGCAATAAATGCCAGCCGAATCGTCCCCCCCGACGACTGCATCAATCTGACTGAAGTTGACAAAGCTACAATTGATTCAGGATGGTTTAATCTAGTAGTGGATCACACTTTGAGATGGGAGAAATTACCTCCAACTTATGAAGAAGGCTCCAAACTGCCGAGAATTAGGAACATGGAGTCATTTCTATCAAGATACCTTGAGGGACTAAACCATAAGGCTCAACCCTATGATTTTCTTGTAAGTGGAAGCCCAGCGTGGTTCAAGACTGAAGTTGGGTCCACGGTGTCAATCCAGTTGCCGCCTCATGAGAATCTACACAAGAGTAAGAAGTGGATGGGATTTGCTCTATGCACATCACTCGTTGTGGACAAGCACACAGCAAAGAAGGATTATGTTGGTTCTTGCCGATTCCAATGGGGCAGATCTCATGCCATTGGATTTAATCTTCCCCTGGACTTTAGACTCTCCATGATAGCTGATTCACATCAACTTTTGGTTTTTTATTTACCGCGGGCAGTGATTCCCCAACAGTTCATTGAAGCATCATCAAGAGAAATATTTACTTCCTATGAAACTGGTAGCCCTGGTGTAAAGGTTCAAACTTGTGGACTTCGTATTTTGTACAAGCAAGATTTACAAGGGTTTGTCCAAACAATCACTCACTGCATATTACGCAGCTCAGGTGCCCCCCTTGAAGTTTACAATAAACTGGTGGTAGAAGATTGGTTAAGTTTGGTAAGGTTGCCGAGTCATAAAGTCAATGCTTCCCGAGATTGCGATTCCAGTACCCGCCGTAAAAGACAGTTTGATTTGATCTCTCAAAGCTATAGAAATATGGACTGGCCTGTGGAAAACCTGGCATGCACGTTCCCTGGAATTGAAATTCCTGAGTGGTTCATAAATGTGGACAAAAGCGACTCTGCCAAAATGCAACTAAATGGGAATTGGATGGGAATTGCAGTGTGTGCTTCTCTATCGATCCACGAGCATCCGAATATCATTTTTGACAATCCGTATGCAGAGTCTACTCGTCACGACATTTTTTGTTATCTAAAAGGCAATATTGCTTCTGCTGGTTCTCTCCGTTATAAGTTTGATACAGACAAAGAAATGTGGATGCATCCATGCAATTTCATTTGCTTTGTCTATATACCACGGGCTTATTTTCCTGATTCATGGAATCAATGTGATACAATCGAGGCAAGTATTGGGTCTGACAGTTCAGGCTTTGGAGTACACAAGTGTGCCCTTAGTCTAGTATTTGAGGAGGATGTGGAAGATCTTGTACAAACATTGACTTACTGCCACTTATCAGCGCACTGTCGTCAGTGTGAAGAAGCACAATATCGTAGTCAAAAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

888

Amino Acids

101.45

Weight (kDa)

6.17

Isoelectric Point (pI)

54.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 22 - 170 7e-52 TIR domain
TIR_2 PF13676 24 - 121 9.6e-16 TIR domain
C-JID PF20160 517 - 645 3.4e-06 C-JID domain
C-JID PF20160 723 - 859 4.8e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 560, 2388
AarI CACCTGC 1 cut(s) 430
Acc36I ACCTGC 2 cut(s) 430, 886
AccB1I GGYRCC 1 cut(s) 1982
AccB7I CCANNNNNTGG 1 cut(s) 654
AccI GTMKAC 3 cut(s) 665, 1204, 2324
AccII CGCG 1 cut(s) 1810
AciI CCGC 4 cut(s) 1598, 1808, 1810, 2089
AclWI GGATC 6 cut(s) 43, 325, 350, 363, 1407, 2272
AcoI YGGCCR 1 cut(s) 391
AcsI RAATTY 3 cut(s) 386, 822, 2181
AcuI CTGAAG 3 cut(s) 740, 1371, 1587
AfaI GTAC 7 cut(s) 65, 1101, 1276, 1922, 2086, 2535, 2586
AfiI CCNNNNNNNGG 2 cut(s) 654, 1177
AflIII ACRYGT 1 cut(s) 315
AjiI CACGTC 1 cut(s) 680
AjnI CCWGG 4 cut(s) 1749, 1882, 2154, 2170
AleI CACNNNNGTG 1 cut(s) 2541
AloI GAACNNNNNNTCC 2 cut(s) 1020, 1052
AluBI AGCT 8 cut(s) 205, 289, 458, 858, 1364, 1775, 1977, 2124
AluI AGCT 8 cut(s) 205, 289, 458, 858, 1364, 1775, 1977, 2124
Alw21I GWGCWC 1 cut(s) 291
Alw26I GTCTC 2 cut(s) 156, 1154
AlwI GGATC 6 cut(s) 43, 325, 350, 363, 1407, 2272
Ama87I CYCGRG 1 cut(s) 2067
AoxI GGCC 2 cut(s) 391, 2141
ApeKI GCWGC 3 cut(s) 458, 855, 1974
ApoI RAATTY 3 cut(s) 386, 822, 2181
Asp700I GAANNNNTTC 2 cut(s) 531, 1032
AspLEI GCGC 1 cut(s) 2617
AspS9I GGNCC 2 cut(s) 1183, 1575
AsuHPI GGTGA 3 cut(s) 379, 454, 615
AvaI CYCGRG 1 cut(s) 2067
AvaII GGWCC 2 cut(s) 1183, 1575
BaeGI GKGCMC 2 cut(s) 1987, 2548
BamHI GGATCC 1 cut(s) 355
BanI GGYRCC 1 cut(s) 1982
BanII GRGCYC 1 cut(s) 291
BarI GAAGNNNNNNTAC 2 cut(s) 2568, 2600
BauI CACGAG 1 cut(s) 2282
Bbv12I GWGCWC 1 cut(s) 291
BbvI GCAGC 3 cut(s) 445, 867, 1986
BceAI ACGGC 1 cut(s) 2076
BcgI CGANNNNNNTGC 4 cut(s) 844, 878, 1639, 1673
BciT130I CCWGG 4 cut(s) 1751, 1884, 2156, 2172
BclI TGATCA 2 cut(s) 3, 1282
BcoDI GTCTC 2 cut(s) 156, 1154
BfaI CTAG 2 cut(s) 1391, 2555
BfmI CTRYAG 2 cut(s) 879, 2125
BfuAI ACCTGC 2 cut(s) 430, 886
BglII AGATCT 2 cut(s) 1721, 2578
BisI GCNGC 4 cut(s) 459, 856, 1598, 1975
BlsI GCNGC 4 cut(s) 460, 857, 1599, 1976
Bme1390I CCNGG 4 cut(s) 1751, 1884, 2156, 2172
Bme18I GGWCC 2 cut(s) 1183, 1575
BmeT110I CYCGRG 1 cut(s) 2067
BmgBI CACGTC 1 cut(s) 680
BmgT120I GGNCC 2 cut(s) 1183, 1575
BmiI GGNNCC 6 cut(s) 357, 1029, 1049, 1447, 1576, 1984
BmrFI CCNGG 4 cut(s) 1751, 1884, 2156, 2172
BmrI ACTGGG 1 cut(s) 332
BmsI GCATC 7 cut(s) 418, 949, 1347, 1850, 2296, 2406, 2428
BmuI ACTGGG 1 cut(s) 332
BplI GAGNNNNNCTC 2 cut(s) 445, 477
Bpu10I CCTNAGC 1 cut(s) 1978
BpuEI CTTGAG 5 cut(s) 197, 453, 693, 996, 1517
Bsa29I ATCGAT 1 cut(s) 2276
BsaBI GATNNNNATC 1 cut(s) 1782
BsaI GGTCTC 1 cut(s) 1154
BsaJI CCNNGG 7 cut(s) 673, 1578, 1749, 1808, 1882, 2170, 2453
BsaXI ACNNNNNCTCC 2 cut(s) 1020, 1050
Bsc4I CCNNNNNNNGG 2 cut(s) 654, 1177
Bse1I ACTGG 8 cut(s) 129, 338, 722, 1591, 1879, 2013, 2082, 2144
Bse3DI GCAATG 2 cut(s) 237, 908
Bse8I GATNNNNATC 1 cut(s) 1782
BseBI CCWGG 4 cut(s) 1751, 1884, 2156, 2172
BseCI ATCGAT 1 cut(s) 2276
BseDI CCNNGG 7 cut(s) 673, 1578, 1749, 1808, 1882, 2170, 2453
BseJI GATNNNNATC 1 cut(s) 1782
BseLI CCNNNNNNNGG 2 cut(s) 654, 1177
BseMI GCAATG 2 cut(s) 237, 908
BseMII CTCAG 5 cut(s) 91, 354, 788, 1992, 2178
BseNI ACTGG 8 cut(s) 129, 338, 722, 1591, 1879, 2013, 2082, 2144
BseRI GAGGAG 2 cut(s) 30, 2579
BseSI GKGCMC 2 cut(s) 1987, 2548
BseXI GCAGC 3 cut(s) 445, 867, 1986
BseYI CCCAGC 1 cut(s) 1549
Bsh1236I CGCG 1 cut(s) 1810
BshFI GGCC 2 cut(s) 393, 2143
BshNI GGYRCC 1 cut(s) 1982
BshVI ATCGAT 1 cut(s) 2276
BsiHKAI GWGCWC 1 cut(s) 291
BsiHKCI CYCGRG 1 cut(s) 2067
BsiSI CCGG 1 cut(s) 804
BsiWI CGTACG 2 cut(s) 63, 1274
BslFI GGGAC 5 cut(s) 186, 336, 777, 1307, 1515
BslI CCNNNNNNNGG 2 cut(s) 654, 1177
BsmAI GTCTC 2 cut(s) 156, 1154
BsmBI CGTCTC 1 cut(s) 156
BsmFI GGGAC 5 cut(s) 186, 336, 777, 1307, 1515
BsmI GAATGC 1 cut(s) 1062
BsnI GGCC 2 cut(s) 393, 2143
Bso31I GGTCTC 1 cut(s) 1154
BsoBI CYCGRG 1 cut(s) 2067
Bsp1286I GDGCHC 3 cut(s) 291, 1987, 2548
Bsp1407I TGTACA 2 cut(s) 1920, 2584
BspACI CCGC 4 cut(s) 1598, 1808, 1810, 2089
BspANI GGCC 2 cut(s) 393, 2143
BspCNI CTCAG 5 cut(s) 90, 355, 789, 1991, 2179
BspDI ATCGAT 1 cut(s) 2276
BspFNI CGCG 1 cut(s) 1810
BspHI TCATGA 2 cut(s) 1285, 1603
BspLI GGNNCC 6 cut(s) 357, 1029, 1049, 1447, 1576, 1984
BspMAI CTGCAG 1 cut(s) 883
BspMI ACCTGC 2 cut(s) 430, 886
BspPI GGATC 6 cut(s) 43, 325, 350, 363, 1407, 2272
BspT107I GGYRCC 1 cut(s) 1982
BspTNI GGTCTC 1 cut(s) 1154
BsrDI GCAATG 2 cut(s) 237, 908
BsrGI TGTACA 2 cut(s) 1920, 2584
BsrI ACTGG 8 cut(s) 129, 338, 722, 1591, 1879, 2013, 2082, 2144
BssECI CCNNGG 7 cut(s) 673, 1578, 1749, 1808, 1882, 2170, 2453
BssSI CACGAG 1 cut(s) 2282
BssT1I CCWWGG 1 cut(s) 673
Bst2BI CACGAG 1 cut(s) 2282
Bst2UI CCWGG 4 cut(s) 1751, 1884, 2156, 2172
Bst4CI ACNGT 7 cut(s) 670, 1003, 1582, 1830, 2103, 2519, 2621
BstAPI GCANNNNNTGC 2 cut(s) 1307, 2264
BstAUI TGTACA 2 cut(s) 1920, 2584
BstC8I GCNNGC 6 cut(s) 291, 407, 1299, 1312, 1812, 2161
BstDEI CTNAG 6 cut(s) 77, 363, 797, 1978, 2187, 2549
BstDSI CCRYGG 3 cut(s) 1578, 1808, 2453
BstFNI CGCG 1 cut(s) 1810
BstHHI GCGC 1 cut(s) 2617
BstMAI GTCTC 2 cut(s) 156, 1154
BstMWI GCNNNNNNNGC 3 cut(s) 1307, 1971, 2264
BstNI CCWGG 4 cut(s) 1751, 1884, 2156, 2172
BstNSI RCATGY 3 cut(s) 319, 409, 2163
BstSCI CCNGG 4 cut(s) 1749, 1882, 2154, 2170
BstSFI CTRYAG 2 cut(s) 879, 2125
BstSLI GKGCMC 2 cut(s) 1987, 2548
BstUI CGCG 1 cut(s) 1810
BstV1I GCAGC 3 cut(s) 445, 867, 1986
BstX2I RGATCY 3 cut(s) 355, 1721, 2578
BstXI CCANNNNNNTGG 1 cut(s) 1193
BstYI RGATCY 3 cut(s) 355, 1721, 2578
Bsu15I ATCGAT 1 cut(s) 2276
BsuRI GGCC 2 cut(s) 393, 2143
BsuTUI ATCGAT 1 cut(s) 2276
BtgI CCRYGG 3 cut(s) 1578, 1808, 2453
BtrI CACGTC 1 cut(s) 680
BtsI GCAGTG 3 cut(s) 1821, 1960, 2265
BtsIMutI CAGTG 5 cut(s) 1821, 1960, 2265, 2617, 2633
BveI ACCTGC 2 cut(s) 430, 886
Cac8I GCNNGC 6 cut(s) 291, 407, 1299, 1312, 1812, 2161
CciI TCATGA 2 cut(s) 1285, 1603
CfoI GCGC 1 cut(s) 2617
Cfr13I GGNCC 2 cut(s) 1183, 1575
Cfr42I CCGCGG 1 cut(s) 1811
ClaI ATCGAT 1 cut(s) 2276
Csp6I GTAC 7 cut(s) 64, 1100, 1275, 1921, 2085, 2534, 2585
CviQI GTAC 7 cut(s) 64, 1100, 1275, 1921, 2085, 2534, 2585
DdeI CTNAG 6 cut(s) 77, 363, 797, 1978, 2187, 2549
DraI TTTAAA 1 cut(s) 424
EaeI YGGCCR 1 cut(s) 391
Ecl136II GAGCTC 1 cut(s) 289
Eco130I CCWWGG 1 cut(s) 673
Eco24I GRGCYC 1 cut(s) 291
Eco31I GGTCTC 1 cut(s) 1154
Eco47I GGWCC 2 cut(s) 1183, 1575
Eco53kI GAGCTC 1 cut(s) 289
Eco57I CTGAAG 3 cut(s) 740, 1371, 1587
Eco88I CYCGRG 1 cut(s) 2067
EcoICRI GAGCTC 1 cut(s) 289
EcoRII CCWGG 4 cut(s) 1749, 1882, 2154, 2170
EcoT14I CCWWGG 1 cut(s) 673
EcoT22I ATGCAT 3 cut(s) 411, 1178, 2421
EcoT38I GRGCYC 1 cut(s) 291
ErhI CCWWGG 1 cut(s) 673
Esp3I CGTCTC 1 cut(s) 156
FaqI GGGAC 5 cut(s) 186, 336, 777, 1307, 1515
FauI CCCGC 2 cut(s) 1803, 2096
FbaI TGATCA 2 cut(s) 3, 1282
FblI GTMKAC 3 cut(s) 665, 1204, 2324
Fnu4HI GCNGC 4 cut(s) 459, 856, 1598, 1975
FriOI GRGCYC 1 cut(s) 291
Fsp4HI GCNGC 4 cut(s) 459, 856, 1598, 1975
FspBI CTAG 2 cut(s) 1391, 2555
GlaI GCGC 1 cut(s) 2616
GluI GCNGC 4 cut(s) 459, 856, 1598, 1975
GsaI CCCAGC 1 cut(s) 1553
HaeIII GGCC 2 cut(s) 393, 2143
HapII CCGG 1 cut(s) 804
HhaI GCGC 1 cut(s) 2617
Hin6I GCGC 1 cut(s) 2615
HinP1I GCGC 1 cut(s) 2615
HincII GTYRAC 2 cut(s) 666, 1357
HindII GTYRAC 2 cut(s) 666, 1357
HpaII CCGG 1 cut(s) 804
HphI GGTGA 3 cut(s) 379, 454, 615
Hpy188I TCNGA 9 cut(s) 161, 364, 555, 759, 866, 973, 1347, 2292, 2515
Hpy99I CGWCG 1 cut(s) 1334
HpyAV CCTTC 3 cut(s) 33, 1436, 1678
HpyCH4III ACNGT 7 cut(s) 670, 1003, 1582, 1830, 2103, 2519, 2621
HpyCH4IV ACGT 4 cut(s) 62, 155, 679, 2165
HpyF10VI GCNNNNNNNGC 3 cut(s) 1307, 1971, 2264
HpyF3I CTNAG 6 cut(s) 77, 363, 797, 1978, 2187, 2549
HpySE526I ACGT 4 cut(s) 62, 155, 679, 2165
HspAI GCGC 1 cut(s) 2615
Ksp22I TGATCA 2 cut(s) 3, 1282
KspI CCGCGG 1 cut(s) 1811
LmnI GCTCC 2 cut(s) 863, 1451
Lsp1109I GCAGC 3 cut(s) 445, 867, 1986
LweI GCATC 7 cut(s) 418, 949, 1347, 1850, 2296, 2406, 2428
MaeI CTAG 2 cut(s) 1391, 2555
MaeII ACGT 4 cut(s) 62, 155, 679, 2165
MaeIII GTNAC 2 cut(s) 1006, 2330
MfeI CAATTG 1 cut(s) 1368
MflI RGATCY 3 cut(s) 355, 1721, 2578
MhlI GDGCHC 3 cut(s) 291, 1987, 2548
MlyI GAGTC 6 cut(s) 879, 1484, 1755, 2056, 2210, 2330
MmeI TCCRAC 2 cut(s) 978, 1454
Mph1103I ATGCAT 3 cut(s) 411, 1178, 2421
MroXI GAANNNNTTC 2 cut(s) 531, 1032
MseI TTAA 7 cut(s) 135, 423, 929, 1127, 1386, 1740, 2027
MslI CAYNNNNRTG 3 cut(s) 1284, 2201, 2541
MspA1I CMGCKG 1 cut(s) 1810
MspI CCGG 1 cut(s) 804
MspR9I CCNGG 4 cut(s) 1751, 1884, 2156, 2172
MunI CAATTG 1 cut(s) 1368
Mva1269I GAATGC 1 cut(s) 1062
MvaI CCWGG 4 cut(s) 1751, 1884, 2156, 2172
MvnI CGCG 1 cut(s) 1810
MwoI GCNNNNNNNGC 3 cut(s) 1307, 1971, 2264
NlaIV GGNNCC 6 cut(s) 357, 1029, 1049, 1447, 1576, 1984
NmeAIII GCCGAG 2 cut(s) 1482, 2070
NmuCI GTSAC 1 cut(s) 2330
NsiI ATGCAT 3 cut(s) 411, 1178, 2421
NspI RCATGY 3 cut(s) 319, 409, 2163
OliI CACNNNNGTG 1 cut(s) 2541
PaeI GCATGC 2 cut(s) 409, 2163
PagI TCATGA 2 cut(s) 1285, 1603
PaqCI CACCTGC 1 cut(s) 430
PciI ACATGT 1 cut(s) 315
PcsI WCGNNNNNNNCGW 1 cut(s) 1326
PctI GAATGC 1 cut(s) 1062
PdmI GAANNNNTTC 2 cut(s) 531, 1032
Pfl23II CGTACG 2 cut(s) 63, 1274
PflMI CCANNNNNTGG 1 cut(s) 654
PkrI GCNGC 4 cut(s) 460, 857, 1599, 1976
PleI GAGTC 6 cut(s) 879, 1483, 1755, 2055, 2210, 2329
PpsI GAGTC 6 cut(s) 879, 1483, 1755, 2055, 2210, 2329
PscI ACATGT 1 cut(s) 315
PsiI TTATAA 2 cut(s) 560, 2388
Psp124BI GAGCTC 1 cut(s) 291
Psp6I CCWGG 4 cut(s) 1749, 1882, 2154, 2170
PspFI CCCAGC 1 cut(s) 1549
PspGI CCWGG 4 cut(s) 1749, 1882, 2154, 2170
PspLI CGTACG 2 cut(s) 63, 1274
PspN4I GGNNCC 6 cut(s) 357, 1029, 1049, 1447, 1576, 1984
PspPI GGNCC 2 cut(s) 1183, 1575
PstI CTGCAG 1 cut(s) 883
PsuI RGATCY 3 cut(s) 355, 1721, 2578
RsaI GTAC 7 cut(s) 65, 1101, 1276, 1922, 2086, 2535, 2586
RsaNI GTAC 7 cut(s) 64, 1100, 1275, 1921, 2085, 2534, 2585
RseI CAYNNNNRTG 3 cut(s) 1284, 2201, 2541
SacI GAGCTC 1 cut(s) 291
SacII CCGCGG 1 cut(s) 1811
SalI GTCGAC 1 cut(s) 664
SaqAI TTAA 7 cut(s) 135, 423, 929, 1127, 1386, 1740, 2027
SatI GCNGC 4 cut(s) 459, 856, 1598, 1975
Sau96I GGNCC 2 cut(s) 1183, 1575
SbfI CCTGCAGG 1 cut(s) 883
SchI GAGTC 6 cut(s) 879, 1484, 1755, 2056, 2210, 2330
ScrFI CCNGG 4 cut(s) 1751, 1884, 2156, 2172
SdaI CCTGCAGG 1 cut(s) 883
SduI GDGCHC 3 cut(s) 291, 1987, 2548
SfaNI GCATC 7 cut(s) 418, 949, 1347, 1850, 2296, 2406, 2428
SfcI CTRYAG 2 cut(s) 879, 2125
Sfr303I CCGCGG 1 cut(s) 1811
SgrBI CCGCGG 1 cut(s) 1811
SinI GGWCC 2 cut(s) 1183, 1575
SmiMI CAYNNNNRTG 3 cut(s) 1284, 2201, 2541
SmlI CTYRAG 5 cut(s) 176, 468, 708, 1011, 1496
SmoI CTYRAG 5 cut(s) 176, 468, 708, 1011, 1496
SphI GCATGC 2 cut(s) 409, 2163
Sse8387I CCTGCAGG 1 cut(s) 883
SsiI CCGC 4 cut(s) 1598, 1808, 1810, 2089
SspI AATATT 3 cut(s) 611, 1857, 2362
SspMI CTAG 2 cut(s) 1391, 2555
SstI GAGCTC 1 cut(s) 291
StyD4I CCNGG 4 cut(s) 1749, 1882, 2154, 2170
StyI CCWWGG 1 cut(s) 673
TaaI ACNGT 7 cut(s) 670, 1003, 1582, 1830, 2103, 2519, 2621
TaiI ACGT 4 cut(s) 65, 158, 682, 2168
TatI WGTACW 3 cut(s) 1920, 2533, 2584
TauI GCSGC 1 cut(s) 1600
Tru1I TTAA 7 cut(s) 135, 423, 929, 1127, 1386, 1740, 2027
Tru9I TTAA 7 cut(s) 135, 423, 929, 1127, 1386, 1740, 2027
TscAI CASTG 5 cut(s) 1821, 1967, 2265, 2624, 2633
TseFI GTSAC 1 cut(s) 2330
TseI GCWGC 3 cut(s) 458, 855, 1974
Tsp45I GTSAC 1 cut(s) 2330
TspGWI ACGGA 2 cut(s) 2301, 2372
TspRI CASTG 5 cut(s) 1821, 1967, 2265, 2624, 2633
Van91I CCANNNNNTGG 1 cut(s) 654
VpaK11BI GGWCC 2 cut(s) 1183, 1575
XapI RAATTY 3 cut(s) 386, 822, 2181
XceI RCATGY 3 cut(s) 319, 409, 2163
XmiI GTMKAC 3 cut(s) 665, 1204, 2324
XmnI GAANNNNTTC 2 cut(s) 531, 1032
XspI CTAG 2 cut(s) 1391, 2555
Zsp2I ATGCAT 3 cut(s) 411, 1178, 2421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.