Rh7CG509900

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000129
Physical Location & Seq
Forward (+)
68886797 .. 68889175
2379 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG509900.1

Sequence Viewer

Length: 1977 bp
ATGTTGGATAATTTAAGAGATGAGTGGGAATCTACAGACCTGTGTTCCACAATGTATATTACTCCAGAAAATGTGGGGCAATCTTCCCAACTGCGTGTGACATGTAAGCATACAGAGGGGAAACAAGTTGATCATTTGCCACTGACAACTCTAGCGTCTATAAAACAAGTGCCTTTTAAGTCAGATGTAAGGATCGTACATCCTGGAGATGAAATTCCAGAGTGGTTCAGCACTATATCTACCAGAAATCCCATATCAATCTCGATACCTCAAAATCTGGCCGATGATAACAAGTGGAAGGGATTTGCCGCGTGTGCTATATTCTCAGTCATGGGGCATACCGCTCTCTCTGTTATTGAACCGGATCCTGATTTTCTTAATTACTCGTATCAAATCACATTGGAAACTGATGTTATGCATCTGGAACCATTTCGGGTGTTGGGAGTGGATTTAGGCGGCTCTAGATCAAGTTCTCATCTGCTTGTGATTTTCGGTATATCTAGTTCGAAGTTTCCACAGAGGGGGTTAAATCAATCAACTGTGGTGAGGGCTATATTTGAAACCACTAATCCATCCATGGTGGTCCAGAAATGTGGAATTCGTCTACTCTATGAGCAAGATGCTGGATGGCATTTCAAAATAGCCTGGGGCGATGATCATCCGATTTGTCTGAATAAAGTTGAGGACGCCGCCTCTGTACCGCAGTCTGCCTACTGGCTTAATGAATCTATGGAATGGGAGAAATTCATTCCACCCTTGGAAGAAGAATCCACACTTGTGCTGATAAAGAACCTTGAGTCTGTTCTTCCAAGATACCTTGAGGCACTAAACAGTTATTCTAAAACGTTCGAATTTAACCTCAGAGGAAGCCCAGGGTGGTTTCATGGCTCTGCCTTTGGTACGAGGTCACAGGTGGCCGGAATGTCAATTGAGCTACCTCAAAATCTACTCAAAAGCAAGAAGTGGATGGGATTTGCAATATACGCATCAATTGTAGAGGAAGTGGGCCAGACAATGAAAGAGGACGACTATCAGGTATTTGTTACACTAATAAGTGGGGATAAATTATTTCCGGTTGTGGGCCTAGGACTTGAGCACGTTAGGCCATTGTCAGAAGAACATCATCAACTATTGGTTTCTTACATACCGCGGCCACAGATTCCCGAAGTGTTCACTCAGACATTAACAACTGCAATGATCAGTGTTGATAGCCCTCATGTAAAGGTTCAAAGATGTGGGTTCCATATTGTGTTTCAGGAAGATATACAAGGGTTTGCTGATACAATTATCCAGTGCATGCAGAGGGAAGGTTCTCTTAAATTTTACAATAAGTTGATGGTAGAAGGATGGATAAAGTTGATACAATTGCAAGGTGCCCATATAGAGGGAATGAAAGAACGGGATTCCAGAACCCCACGGGAAAAATACTTTGAATTGCACTCACGAAAATATAGAAATTGGGACTGGTCTGACCCTCGTCCTGCTTATTGTGTCTTCGAGAGAGTTGAAATCTCCAAGTTGAAATGGTTCATGCCTTTCATCAACCAAGGCAACTCTGCAGAAACCCAACTTCCTCTGAATGTGTTCAATGATGATAATTGGTTGGGGTTTGCCGTATGTTCTCGGTTGTCCCACGACCAGTATCCAAACATTAGTCTTGGCAATACTGCTTCTGATTCAGAGGATGTTATGCTTACTTGCCGTCTGGACTCTGACGTTTCTTGGCAGGGCTTATTTAATTTCCAGATGCATTTAGGTTTAAAGATTCGAGAGGCATCGGAATCCAATGCGACTTGTTTCTTTTATATACCGCGCACTAAAGTTCGGAGTAAGGTTTGGAGGCAATGCAAATTGGCCAGGATAACTATGTGGTTTTCTAGCCCATGCTTAGCAGTGCATAGTTGTGCCCTTCGTCTACTATTTAAGGAGGACGTTGAACATCTTGTAGAAACACTGACCCTCGCCGAATTACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

658

Amino Acids

75.15

Weight (kDa)

5.71

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C-JID PF20160 67 - 208 2.9e-11 C-JID domain
C-JID PF20160 509 - 646 8.6e-06 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1373
AccBSI CCGCTC 1 cut(s) 344
AccI GTMKAC 2 cut(s) 604, 1915
AccII CGCG 3 cut(s) 311, 1150, 1813
AciI CCGC 8 cut(s) 309, 342, 456, 690, 701, 1148, 1150, 1811
AclI AACGTT 1 cut(s) 845
AclWI GGATC 3 cut(s) 200, 359, 372
AcoI YGGCCR 4 cut(s) 279, 915, 1151, 1854
AcsI RAATTY 5 cut(s) 213, 597, 743, 851, 1319
AcyI GRCGYC 1 cut(s) 687
AfaI GTAC 3 cut(s) 198, 699, 901
AfiI CCNNNNNNNGG 3 cut(s) 521, 1079, 1384
AflIII ACRYGT 1 cut(s) 101
AgsI TTSAA 9 cut(s) 359, 560, 637, 1229, 1433, 1508, 1522, 1588, 1937
AjnI CCWGG 4 cut(s) 202, 644, 871, 1856
AleI CACNNNNGTG 1 cut(s) 776
AluBI AGCT 1 cut(s) 934
AluI AGCT 1 cut(s) 934
Alw21I GWGCWC 1 cut(s) 1098
AlwI GGATC 3 cut(s) 200, 359, 372
AoxI GGCC 7 cut(s) 279, 915, 1006, 1081, 1103, 1151, 1854
ApoI RAATTY 5 cut(s) 213, 597, 743, 851, 1319
Asp700I GAANNNNTTC 3 cut(s) 429, 1526, 1583
AspA2I CCTAGG 1 cut(s) 1084
AspLEI GCGC 1 cut(s) 1815
AspS9I GGNCC 3 cut(s) 583, 1006, 1081
AsuHPI GGTGA 1 cut(s) 556
AsuII TTCGAA 2 cut(s) 506, 849
AvaII GGWCC 1 cut(s) 583
AvrII CCTAGG 1 cut(s) 1084
BaeGI GKGCMC 2 cut(s) 1378, 1909
BalI TGGCCA 1 cut(s) 1856
BamHI GGATCC 1 cut(s) 364
BanI GGYRCC 1 cut(s) 1373
BbsI GAAGAC 1 cut(s) 1486
Bbv12I GWGCWC 1 cut(s) 1098
BccI CCATC 5 cut(s) 580, 621, 961, 1330, 1341
BceAI ACGGC 2 cut(s) 1598, 1686
BciT130I CCWGG 4 cut(s) 204, 646, 873, 1858
BciVI GTATCC 1 cut(s) 1653
BclI TGATCA 3 cut(s) 130, 655, 1197
BfaI CTAG 5 cut(s) 152, 462, 501, 1085, 1878
BfmI CTRYAG 2 cut(s) 33, 1557
BfuI GTATCC 1 cut(s) 1653
BisI GCNGC 4 cut(s) 309, 457, 690, 1151
BlnI CCTAGG 1 cut(s) 1084
BlpI GCTNAGC 1 cut(s) 1888
BlsI GCNGC 4 cut(s) 310, 458, 691, 1152
Bme1390I CCNGG 4 cut(s) 204, 646, 873, 1858
Bme18I GGWCC 1 cut(s) 583
BmgT120I GGNCC 3 cut(s) 583, 1006, 1081
BmiI GGNNCC 4 cut(s) 366, 426, 1241, 1375
BmrFI CCNGG 4 cut(s) 204, 646, 873, 1858
BmsI GCATC 5 cut(s) 427, 610, 995, 1737, 1784
BoxI GACNNNNGTC 1 cut(s) 1476
BpiI GAAGAC 1 cut(s) 1486
BpmI CTGGAG 2 cut(s) 48, 225
Bpu1102I GCTNAGC 1 cut(s) 1888
Bpu14I TTCGAA 2 cut(s) 506, 849
BpuEI CTTGAG 3 cut(s) 815, 839, 1112
BsaBI GATNNNNATC 1 cut(s) 657
BsaHI GRCGYC 1 cut(s) 687
BsaJI CCNNGG 9 cut(s) 576, 645, 756, 871, 872, 1084, 1148, 1415, 1546
BsaWI WCCGGW 2 cut(s) 361, 1072
Bsc4I CCNNNNNNNGG 3 cut(s) 521, 1079, 1384
Bse1I ACTGG 4 cut(s) 719, 1291, 1469, 1639
Bse3DI GCAATG 2 cut(s) 1200, 1850
Bse8I GATNNNNATC 1 cut(s) 657
BseBI CCWGG 4 cut(s) 204, 646, 873, 1858
BseDI CCNNGG 9 cut(s) 576, 645, 756, 871, 872, 1084, 1148, 1415, 1546
BseGI GGATG 7 cut(s) 199, 572, 632, 658, 972, 1352, 1690
BseJI GATNNNNATC 1 cut(s) 657
BseLI CCNNNNNNNGG 3 cut(s) 521, 1079, 1384
BseMI GCAATG 2 cut(s) 1200, 1850
BseMII CTCAG 3 cut(s) 339, 874, 1190
BseNI ACTGG 4 cut(s) 719, 1291, 1469, 1639
BseSI GKGCMC 2 cut(s) 1378, 1909
Bsh1236I CGCG 3 cut(s) 311, 1150, 1813
BshFI GGCC 7 cut(s) 281, 917, 1008, 1083, 1105, 1153, 1856
BshNI GGYRCC 1 cut(s) 1373
BsiHKAI GWGCWC 1 cut(s) 1098
BsiSI CCGG 3 cut(s) 362, 918, 1073
BslFI GGGAC 2 cut(s) 1475, 1615
BslI CCNNNNNNNGG 3 cut(s) 521, 1079, 1384
BsmFI GGGAC 2 cut(s) 1475, 1615
BsnI GGCC 7 cut(s) 281, 917, 1008, 1083, 1105, 1153, 1856
Bsp119I TTCGAA 2 cut(s) 506, 849
Bsp1286I GDGCHC 3 cut(s) 1098, 1378, 1909
Bsp143I GATC 6 cut(s) 130, 192, 364, 464, 655, 1197
Bsp1720I GCTNAGC 1 cut(s) 1888
Bsp19I CCATGG 1 cut(s) 576
BspACI CCGC 8 cut(s) 309, 342, 456, 690, 701, 1148, 1150, 1811
BspANI GGCC 7 cut(s) 281, 917, 1008, 1083, 1105, 1153, 1856
BspCNI CTCAG 3 cut(s) 338, 873, 1189
BspFNI CGCG 3 cut(s) 311, 1150, 1813
BspLI GGNNCC 4 cut(s) 366, 426, 1241, 1375
BspMAI CTGCAG 1 cut(s) 1561
BspPI GGATC 3 cut(s) 200, 359, 372
BspT104I TTCGAA 2 cut(s) 506, 849
BspT107I GGYRCC 1 cut(s) 1373
BsrBI CCGCTC 1 cut(s) 344
BsrDI GCAATG 2 cut(s) 1200, 1850
BsrI ACTGG 4 cut(s) 719, 1291, 1469, 1639
BssECI CCNNGG 9 cut(s) 576, 645, 756, 871, 872, 1084, 1148, 1415, 1546
BssMI GATC 6 cut(s) 130, 192, 364, 464, 655, 1197
BssNI GRCGYC 1 cut(s) 687
BssT1I CCWWGG 4 cut(s) 576, 756, 1084, 1546
Bst2UI CCWGG 4 cut(s) 204, 646, 873, 1858
Bst4CI ACNGT 2 cut(s) 541, 833
BstACI GRCGYC 1 cut(s) 687
BstBI TTCGAA 2 cut(s) 506, 849
BstC8I GCNNGC 1 cut(s) 1298
BstDEI CTNAG 4 cut(s) 325, 860, 1176, 1888
BstDSI CCRYGG 3 cut(s) 576, 1148, 1415
BstF5I GGATG 7 cut(s) 199, 572, 632, 658, 972, 1352, 1690
BstFNI CGCG 3 cut(s) 311, 1150, 1813
BstHHI GCGC 1 cut(s) 1815
BstKTI GATC 6 cut(s) 133, 195, 367, 467, 658, 1200
BstMBI GATC 6 cut(s) 130, 192, 364, 464, 655, 1197
BstMWI GCNNNNNNNGC 3 cut(s) 314, 983, 1102
BstNI CCWGG 4 cut(s) 204, 646, 873, 1858
BstNSI RCATGY 2 cut(s) 105, 1300
BstPAI GACNNNNGTC 1 cut(s) 1476
BstSCI CCNGG 4 cut(s) 202, 644, 871, 1856
BstSFI CTRYAG 2 cut(s) 33, 1557
BstSLI GKGCMC 2 cut(s) 1378, 1909
BstUI CGCG 3 cut(s) 311, 1150, 1813
BstV2I GAAGAC 1 cut(s) 1486
BstX2I RGATCY 1 cut(s) 364
BstXI CCANNNNNNTGG 1 cut(s) 593
BstYI RGATCY 1 cut(s) 364
BsuI GTATCC 1 cut(s) 1653
BsuRI GGCC 7 cut(s) 281, 917, 1008, 1083, 1105, 1153, 1856
BtgI CCRYGG 3 cut(s) 576, 1148, 1415
BtgZI GCGATG 1 cut(s) 666
BtsCI GGATG 7 cut(s) 199, 572, 632, 658, 972, 1352, 1690
BtsI GCAGTG 1 cut(s) 1899
BtsIMutI CAGTG 5 cut(s) 140, 1207, 1298, 1899, 1952
Cac8I GCNNGC 1 cut(s) 1298
CfoI GCGC 1 cut(s) 1815
Cfr13I GGNCC 3 cut(s) 583, 1006, 1081
Cfr42I CCGCGG 1 cut(s) 1151
CseI GACGC 2 cut(s) 144, 695
Csp6I GTAC 3 cut(s) 197, 698, 900
CviAII CATG 8 cut(s) 102, 331, 577, 884, 1217, 1297, 1531, 1884
CviQI GTAC 3 cut(s) 197, 698, 900
DdeI CTNAG 4 cut(s) 325, 860, 1176, 1888
DpnI GATC 6 cut(s) 132, 194, 366, 466, 657, 1199
DpnII GATC 6 cut(s) 130, 192, 364, 464, 655, 1197
DraI TTTAAA 1 cut(s) 1761
EaeI YGGCCR 4 cut(s) 279, 915, 1151, 1854
Eco130I CCWWGG 4 cut(s) 576, 756, 1084, 1546
Eco47I GGWCC 1 cut(s) 583
EcoRI GAATTC 1 cut(s) 597
EcoRII CCWGG 4 cut(s) 202, 644, 871, 1856
EcoT14I CCWWGG 4 cut(s) 576, 756, 1084, 1546
EcoT22I ATGCAT 2 cut(s) 420, 1752
ErhI CCWWGG 4 cut(s) 576, 756, 1084, 1546
FaeI CATG 8 cut(s) 105, 334, 580, 887, 1220, 1300, 1534, 1887
FalI AAGNNNNNCTT 2 cut(s) 1299, 1331
FaqI GGGAC 2 cut(s) 1475, 1615
FatI CATG 8 cut(s) 101, 330, 576, 883, 1216, 1296, 1530, 1883
FbaI TGATCA 3 cut(s) 130, 655, 1197
FblI GTMKAC 2 cut(s) 604, 1915
Fnu4HI GCNGC 4 cut(s) 309, 457, 690, 1151
FokI GGATG 7 cut(s) 186, 559, 639, 645, 979, 1359, 1697
Fsp4HI GCNGC 4 cut(s) 309, 457, 690, 1151
FspBI CTAG 5 cut(s) 152, 462, 501, 1085, 1878
GlaI GCGC 1 cut(s) 1814
GluI GCNGC 4 cut(s) 309, 457, 690, 1151
GsuI CTGGAG 2 cut(s) 48, 225
HaeIII GGCC 7 cut(s) 281, 917, 1008, 1083, 1105, 1153, 1856
HapII CCGG 3 cut(s) 362, 918, 1073
HgaI GACGC 2 cut(s) 144, 695
HhaI GCGC 1 cut(s) 1815
Hin1I GRCGYC 1 cut(s) 687
Hin1II CATG 8 cut(s) 105, 334, 580, 887, 1220, 1300, 1534, 1887
Hin6I GCGC 1 cut(s) 1813
HinP1I GCGC 1 cut(s) 1813
HpaII CCGG 3 cut(s) 362, 918, 1073
HphI GGTGA 1 cut(s) 556
Hpy166II GTNNAC 3 cut(s) 605, 1173, 1916
Hpy8I GTNNAC 3 cut(s) 605, 1173, 1916
HpyAV CCTTC 4 cut(s) 292, 1301, 1337, 1919
HpyCH4III ACNGT 2 cut(s) 541, 833
HpyCH4IV ACGT 4 cut(s) 845, 1098, 1716, 1932
HpyF10VI GCNNNNNNNGC 3 cut(s) 314, 983, 1102
HpyF3I CTNAG 4 cut(s) 325, 860, 1176, 1888
HpySE526I ACGT 4 cut(s) 845, 1098, 1716, 1932
Hsp92I GRCGYC 1 cut(s) 687
Hsp92II CATG 8 cut(s) 105, 334, 580, 887, 1220, 1300, 1534, 1887
HspAI GCGC 1 cut(s) 1813
Ksp22I TGATCA 3 cut(s) 130, 655, 1197
KspI CCGCGG 1 cut(s) 1151
Kzo9I GATC 6 cut(s) 130, 192, 364, 464, 655, 1197
LweI GCATC 5 cut(s) 427, 610, 995, 1737, 1784
MaeI CTAG 5 cut(s) 152, 462, 501, 1085, 1878
MaeII ACGT 4 cut(s) 845, 1098, 1716, 1932
MaeIII GTNAC 3 cut(s) 97, 906, 1042
MalI GATC 6 cut(s) 132, 194, 366, 466, 657, 1199
MbiI CCGCTC 1 cut(s) 344
MboI GATC 6 cut(s) 130, 192, 364, 464, 655, 1197
MboII GAAGA 7 cut(s) 75, 773, 776, 797, 1127, 1271, 1486
MfeI CAATTG 3 cut(s) 927, 990, 1364
MflI RGATCY 1 cut(s) 364
MhlI GDGCHC 3 cut(s) 1098, 1378, 1909
MlsI TGGCCA 1 cut(s) 1856
MluNI TGGCCA 1 cut(s) 1856
MlyI GAGTC 2 cut(s) 806, 1703
Mox20I TGGCCA 1 cut(s) 1856
Mph1103I ATGCAT 2 cut(s) 420, 1752
MroXI GAANNNNTTC 3 cut(s) 429, 1526, 1583
MscI TGGCCA 1 cut(s) 1856
MslI CAYNNNNRTG 2 cut(s) 776, 1902
Msp20I TGGCCA 1 cut(s) 1856
MspA1I CMGCKG 1 cut(s) 1150
MspI CCGG 3 cut(s) 362, 918, 1073
MspR9I CCNGG 4 cut(s) 204, 646, 873, 1858
MunI CAATTG 3 cut(s) 927, 990, 1364
MvaI CCWGG 4 cut(s) 204, 646, 873, 1858
MvnI CGCG 3 cut(s) 311, 1150, 1813
MwoI GCNNNNNNNGC 3 cut(s) 314, 983, 1102
NcoI CCATGG 1 cut(s) 576
NdeII GATC 6 cut(s) 130, 192, 364, 464, 655, 1197
NlaIII CATG 8 cut(s) 105, 334, 580, 887, 1220, 1300, 1534, 1887
NlaIV GGNNCC 4 cut(s) 366, 426, 1241, 1375
NmuCI GTSAC 2 cut(s) 97, 906
NsiI ATGCAT 2 cut(s) 420, 1752
NspI RCATGY 2 cut(s) 105, 1300
NspV TTCGAA 2 cut(s) 506, 849
OliI CACNNNNGTG 1 cut(s) 776
PaeI GCATGC 1 cut(s) 1300
PasI CCCWGGG 1 cut(s) 872
PciI ACATGT 1 cut(s) 101
PdmI GAANNNNTTC 3 cut(s) 429, 1526, 1583
PfeI GAWTC 8 cut(s) 29, 725, 767, 1159, 1403, 1676, 1765, 1781
PfoI TCCNGGA 1 cut(s) 202
PkrI GCNGC 4 cut(s) 310, 458, 691, 1152
PleI GAGTC 2 cut(s) 805, 1703
PpsI GAGTC 2 cut(s) 805, 1703
PscI ACATGT 1 cut(s) 101
PshAI GACNNNNGTC 1 cut(s) 1476
Psp1406I AACGTT 1 cut(s) 845
Psp6I CCWGG 4 cut(s) 202, 644, 871, 1856
PspGI CCWGG 4 cut(s) 202, 644, 871, 1856
PspN4I GGNNCC 4 cut(s) 366, 426, 1241, 1375
PspPI GGNCC 3 cut(s) 583, 1006, 1081
PsrI GAACNNNNNNTAC 2 cut(s) 487, 519
PstI CTGCAG 1 cut(s) 1561
PsuI RGATCY 1 cut(s) 364
RsaI GTAC 3 cut(s) 198, 699, 901
RsaNI GTAC 3 cut(s) 197, 698, 900
RseI CAYNNNNRTG 2 cut(s) 776, 1902
SacII CCGCGG 1 cut(s) 1151
SatI GCNGC 4 cut(s) 309, 457, 690, 1151
Sau3AI GATC 6 cut(s) 130, 192, 364, 464, 655, 1197
Sau96I GGNCC 3 cut(s) 583, 1006, 1081
SchI GAGTC 2 cut(s) 806, 1703
ScrFI CCNGG 4 cut(s) 204, 646, 873, 1858
SduI GDGCHC 3 cut(s) 1098, 1378, 1909
SfaNI GCATC 5 cut(s) 427, 610, 995, 1737, 1784
SfcI CTRYAG 2 cut(s) 33, 1557
Sfr303I CCGCGG 1 cut(s) 1151
SfuI TTCGAA 2 cut(s) 506, 849
SgrBI CCGCGG 1 cut(s) 1151
SinI GGWCC 1 cut(s) 583
SmiMI CAYNNNNRTG 2 cut(s) 776, 1902
SmlI CTYRAG 3 cut(s) 794, 818, 1091
SmoI CTYRAG 3 cut(s) 794, 818, 1091
SphI GCATGC 1 cut(s) 1300
SsiI CCGC 8 cut(s) 309, 342, 456, 690, 701, 1148, 1150, 1811
SspMI CTAG 5 cut(s) 152, 462, 501, 1085, 1878
StyD4I CCNGG 4 cut(s) 202, 644, 871, 1856
StyI CCWWGG 4 cut(s) 576, 756, 1084, 1546
TaaI ACNGT 2 cut(s) 541, 833
TaiI ACGT 4 cut(s) 848, 1101, 1719, 1935
TaqI TCGA 5 cut(s) 263, 506, 849, 1497, 1768
TauI GCSGC 4 cut(s) 311, 459, 692, 1153
TfiI GAWTC 8 cut(s) 29, 725, 767, 1159, 1403, 1676, 1765, 1781
TscAI CASTG 5 cut(s) 147, 1207, 1298, 1899, 1959
TseFI GTSAC 2 cut(s) 97, 906
Tsp45I GTSAC 2 cut(s) 97, 906
TspDTI ATGAA 8 cut(s) 225, 736, 738, 872, 1031, 1406, 1519, 1528
TspRI CASTG 5 cut(s) 147, 1207, 1298, 1899, 1959
VpaK11BI GGWCC 1 cut(s) 583
XapI RAATTY 5 cut(s) 213, 597, 743, 851, 1319
XbaI TCTAGA 1 cut(s) 461
XceI RCATGY 2 cut(s) 105, 1300
XmaJI CCTAGG 1 cut(s) 1084
XmiI GTMKAC 2 cut(s) 604, 1915
XmnI GAANNNNTTC 3 cut(s) 429, 1526, 1583
XspI CTAG 5 cut(s) 152, 462, 501, 1085, 1878
Zsp2I ATGCAT 2 cut(s) 420, 1752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.