Rroxscaffold_2G00121870

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000129
Physical Location & Seq
Forward (+)
54671447 .. 54673165
1719 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00121870.1

Sequence Viewer

Length: 1380 bp
ATGCTACGGCTTATAAATCTGAGTGGTTCACCATACTTGAGGTCGACTCCAGACTTCACGGAGGTTCCTGATCTTGAAAACTTAGTGCTTCAAGATTGCACTAGTTTGGTGGAGATTCACCCATCTCTTGGATTTCTGAAGAAACTTGTCTCTTTGAATATGAGAAATTGCAAGTCTATTAAGAGCATTCCACCTTTCATTACCTTGGAATCCCTTCAAATATTGAGGCTTTCACTCTGTTCAGGACTCAAGAAGTGTCCAGAAATTGAAGGAAATATGAAAATCTTGGTGAAGCTTCATTTGGATGGGACCAGCATTAAGGAATTGCCTCCGTCAATTGAAAGATTCACTGGTCTAACCATGTTGGATCTGACAGGTTGCTCCGAAATTGATGAGATACCTAAGAATCTGAATGGTATGAAATGTCTGGAGATGCTTTCCATTGGTGGAACTTCCATAAGGGAGTTATCCTTTATTGAAGGCATGAAGAATCTACGGTATCTATCCTGCCGAGGATGTGAACGTCTAGTTTCAAAATCATGCAAAGGTCTGGCTTCGTTATCGAATTTGACACAGCTAGACTTGAGTTACTGCAATCTGATGGATGGAGCAATTCTCAATGATCTTAGCAGCCTAATCTCCTTAAGATTGTTAGATTTAAGTGGTAATTGCTTTGTGCGATTATCTGAAAGTATCTCTCAACTCTCAAAGCTCGAGACTCTGACCTTGAGTCATTGCAGACAGCTTCAATTGCTGCCCAAGAAGCTTCCGTTAAGTCTTGAGCACGTGTATGCACAAGATTGTACTTCACTGACGGATTACCCAAATCAAATCAAAGTGTCTTCCCGGTCAAAGTTTTTTGCCATACATCTTAAAGATGAAATTCCAGAGTGGTTCAGCACTGTCTCTACAAGAAATCACATATCAATCTCGATACCTCAAAATCTGGCTAATGATGACAAGTGGAAGGGATTTGCCACGTGTGCTATATTCTCAGTCAAGGGGCATACTGCTCTCTCCCTTATTGAATCGGATCCTGATTTTTCTAATTACTCGTATCAAATCACATTGGAAACTGATGTTGTGCGTCTGAAACCAGATGTGTGGGAACTGGAATTAGGCTCCTTTGGATTAAGTTCTCATCTGTGTGTGAGTTTCTTTATATCTCGTTCGAAGGTTCCACATTGGGGTTTAAATAAATCAACTGTGGTGAGGGCTATATTTGAAACCACTAATCCATCCATGGTGGTCCAAAAATGTGGAATTCGTCTAGTCTATGAGCAAGATGCTGGATGGCATTCCAGAATATTCTATGAGTGGGATGATCCGATTTGTCTGAATGAAGTTAAGGATGAACTGGAGGACGCCGCCACTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

459

Amino Acids

51.5

Weight (kDa)

5.98

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 51 - 193 2.3e-11 Leucine-rich repeat region
LRR_13 PF23286 69 - 278 1.6e-12 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 184 - 256 6.2e-07 Leucine-rich repeat region
C-JID PF20160 293 - 430 1.5e-10 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 14
AccB7I CCANNNNNTGG 1 cut(s) 128
AccI GTMKAC 1 cut(s) 44
AciI CCGC 1 cut(s) 1368
AclWI GGATC 4 cut(s) 375, 1028, 1041, 1319
AcsI RAATTY 3 cut(s) 565, 882, 1263
AcuI CTGAAG 1 cut(s) 158
AcvI CACGTG 2 cut(s) 787, 981
AcyI GRCGYC 1 cut(s) 1365
AfaI GTAC 1 cut(s) 805
AfiI CCNNNNNNNGG 2 cut(s) 128, 1187
AflII CTTAAG 1 cut(s) 643
AflIII ACRYGT 2 cut(s) 786, 980
AhdI GACNNNNNGTC 1 cut(s) 729
AhlI ACTAGT 1 cut(s) 101
AjuI GAANNNNNNNTTGG 2 cut(s) 284, 316
AluBI AGCT 5 cut(s) 295, 577, 712, 745, 766
AluI AGCT 5 cut(s) 295, 577, 712, 745, 766
Alw21I GWGCWC 1 cut(s) 786
Alw26I GTCTC 3 cut(s) 154, 710, 910
AlwI GGATC 4 cut(s) 375, 1028, 1041, 1319
Ama87I CYCGRG 1 cut(s) 713
ApeKI GCWGC 2 cut(s) 630, 754
ApoI RAATTY 3 cut(s) 565, 882, 1263
Asp700I GAANNNNTTC 1 cut(s) 213
AspS9I GGNCC 2 cut(s) 309, 1249
AsuC2I CCSGG 1 cut(s) 847
AsuHPI GGTGA 4 cut(s) 21, 110, 301, 1222
AsuII TTCGAA 1 cut(s) 1172
AvaI CYCGRG 1 cut(s) 713
AvaII GGWCC 2 cut(s) 309, 1249
BamHI GGATCC 1 cut(s) 1033
BbrPI CACGTG 2 cut(s) 787, 981
BbsI GAAGAC 1 cut(s) 834
Bbv12I GWGCWC 1 cut(s) 786
BbvI GCAGC 2 cut(s) 642, 741
BccI CCATC 6 cut(s) 130, 299, 595, 599, 1246, 1287
BceAI ACGGC 1 cut(s) 23
BcnI CCSGG 1 cut(s) 847
BcoDI GTCTC 3 cut(s) 154, 710, 910
BcuI ACTAGT 1 cut(s) 101
BfaI CTAG 4 cut(s) 102, 527, 578, 1271
BfrI CTTAAG 1 cut(s) 643
BisI GCNGC 3 cut(s) 631, 755, 1368
BlsI GCNGC 3 cut(s) 632, 756, 1369
Bme1390I CCNGG 1 cut(s) 847
Bme18I GGWCC 2 cut(s) 309, 1249
BmeRI GACNNNNNGTC 1 cut(s) 729
BmeT110I CYCGRG 1 cut(s) 713
BmgT120I GGNCC 2 cut(s) 309, 1249
BmiI GGNNCC 5 cut(s) 66, 310, 1035, 1123, 1179
BmrFI CCNGG 1 cut(s) 847
BmsI GCATC 2 cut(s) 423, 1276
BpiI GAAGAC 1 cut(s) 834
BplI GAGNNNNNCTC 4 cut(s) 31, 63, 600, 632
BpmI CTGGAG 3 cut(s) 33, 449, 1379
Bpu14I TTCGAA 1 cut(s) 1172
BpuEI CTTGAG 5 cut(s) 58, 233, 604, 748, 800
BpuMI CCSGG 1 cut(s) 847
BsaAI YACGTR 2 cut(s) 787, 981
BsaHI GRCGYC 1 cut(s) 1365
BsaJI CCNNGG 3 cut(s) 204, 511, 1242
Bsc4I CCNNNNNNNGG 2 cut(s) 128, 1187
Bse1I ACTGG 3 cut(s) 355, 1116, 1362
Bse3DI GCAATG 1 cut(s) 733
BseDI CCNNGG 3 cut(s) 204, 511, 1242
BseGI GGATG 7 cut(s) 310, 521, 610, 1238, 1298, 1327, 1357
BseLI CCNNNNNNNGG 2 cut(s) 128, 1187
BseMI GCAATG 1 cut(s) 733
BseMII CTCAG 2 cut(s) 11, 1008
BseNI ACTGG 3 cut(s) 355, 1116, 1362
BseXI GCAGC 2 cut(s) 642, 741
BsiHKAI GWGCWC 1 cut(s) 786
BsiHKCI CYCGRG 1 cut(s) 713
BsiSI CCGG 1 cut(s) 847
BslFI GGGAC 1 cut(s) 322
BslI CCNNNNNNNGG 2 cut(s) 128, 1187
BsmAI GTCTC 3 cut(s) 154, 710, 910
BsmFI GGGAC 1 cut(s) 322
BsmI GAATGC 2 cut(s) 186, 1297
BsoBI CYCGRG 1 cut(s) 713
Bsp119I TTCGAA 1 cut(s) 1172
Bsp1286I GDGCHC 1 cut(s) 786
Bsp143I GATC 5 cut(s) 70, 367, 622, 1033, 1324
Bsp19I CCATGG 1 cut(s) 1242
BspACI CCGC 1 cut(s) 1368
BspCNI CTCAG 2 cut(s) 12, 1007
BspLI GGNNCC 5 cut(s) 66, 310, 1035, 1123, 1179
BspPI GGATC 4 cut(s) 375, 1028, 1041, 1319
BspT104I TTCGAA 1 cut(s) 1172
BspTI CTTAAG 1 cut(s) 643
BsrDI GCAATG 1 cut(s) 733
BsrI ACTGG 3 cut(s) 355, 1116, 1362
BssECI CCNNGG 3 cut(s) 204, 511, 1242
BssMI GATC 5 cut(s) 70, 367, 622, 1033, 1324
BssNI GRCGYC 1 cut(s) 1365
BssT1I CCWWGG 2 cut(s) 204, 1242
Bst4CI ACNGT 4 cut(s) 498, 904, 1207, 1375
BstACI GRCGYC 1 cut(s) 1365
BstAFI CTTAAG 1 cut(s) 643
BstBAI YACGTR 2 cut(s) 787, 981
BstBI TTCGAA 1 cut(s) 1172
BstDEI CTNAG 5 cut(s) 20, 82, 402, 626, 994
BstDSI CCRYGG 1 cut(s) 1242
BstF5I GGATG 7 cut(s) 310, 521, 610, 1238, 1298, 1327, 1357
BstKTI GATC 5 cut(s) 73, 370, 625, 1036, 1327
BstMAI GTCTC 3 cut(s) 154, 710, 910
BstMBI GATC 5 cut(s) 70, 367, 622, 1033, 1324
BstMWI GCNNNNNNNGC 3 cut(s) 751, 763, 983
BstSCI CCNGG 1 cut(s) 845
BstV1I GCAGC 2 cut(s) 642, 741
BstV2I GAAGAC 1 cut(s) 834
BstX2I RGATCY 2 cut(s) 367, 1033
BstXI CCANNNNNNTGG 2 cut(s) 1104, 1259
BstYI RGATCY 2 cut(s) 367, 1033
BtgI CCRYGG 1 cut(s) 1242
BtsCI GGATG 7 cut(s) 310, 521, 610, 1238, 1298, 1327, 1357
BtsIMutI CAGTG 4 cut(s) 348, 809, 900, 1371
Cfr13I GGNCC 2 cut(s) 309, 1249
CseI GACGC 2 cut(s) 1076, 1373
Csp6I GTAC 1 cut(s) 804
CviAII CATG 4 cut(s) 361, 484, 540, 1243
CviQI GTAC 1 cut(s) 804
DdeI CTNAG 5 cut(s) 20, 82, 402, 626, 994
DpnI GATC 5 cut(s) 72, 369, 624, 1035, 1326
DpnII GATC 5 cut(s) 70, 367, 622, 1033, 1324
DraI TTTAAA 1 cut(s) 1194
DriI GACNNNNNGTC 1 cut(s) 729
Eam1105I GACNNNNNGTC 1 cut(s) 729
Eco130I CCWWGG 2 cut(s) 204, 1242
Eco47I GGWCC 2 cut(s) 309, 1249
Eco57I CTGAAG 1 cut(s) 158
Eco72I CACGTG 2 cut(s) 787, 981
Eco88I CYCGRG 1 cut(s) 713
EcoRI GAATTC 1 cut(s) 1263
EcoT14I CCWWGG 2 cut(s) 204, 1242
ErhI CCWWGG 2 cut(s) 204, 1242
FaeI CATG 4 cut(s) 364, 487, 543, 1246
FaqI GGGAC 1 cut(s) 322
FatI CATG 4 cut(s) 360, 483, 539, 1242
FblI GTMKAC 1 cut(s) 44
Fnu4HI GCNGC 3 cut(s) 631, 755, 1368
FokI GGATG 7 cut(s) 317, 528, 617, 1225, 1305, 1334, 1364
Fsp4HI GCNGC 3 cut(s) 631, 755, 1368
FspBI CTAG 4 cut(s) 102, 527, 578, 1271
GluI GCNGC 3 cut(s) 631, 755, 1368
GsuI CTGGAG 3 cut(s) 33, 449, 1379
HapII CCGG 1 cut(s) 847
HgaI GACGC 2 cut(s) 1076, 1373
Hin1I GRCGYC 1 cut(s) 1365
Hin1II CATG 4 cut(s) 364, 487, 543, 1246
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HindIII AAGCTT 2 cut(s) 293, 764
HpaII CCGG 1 cut(s) 847
HphI GGTGA 4 cut(s) 21, 110, 301, 1222
Hpy166II GTNNAC 3 cut(s) 29, 45, 521
Hpy8I GTNNAC 3 cut(s) 29, 45, 521
HpyAV CCTTC 5 cut(s) 224, 263, 473, 961, 1168
HpyCH4III ACNGT 4 cut(s) 498, 904, 1207, 1375
HpyCH4IV ACGT 3 cut(s) 523, 786, 980
HpyCH4V TGCA 6 cut(s) 99, 171, 543, 594, 738, 794
HpyF10VI GCNNNNNNNGC 3 cut(s) 751, 763, 983
HpyF3I CTNAG 5 cut(s) 20, 82, 402, 626, 994
HpySE526I ACGT 3 cut(s) 523, 786, 980
Hsp92I GRCGYC 1 cut(s) 1365
Hsp92II CATG 4 cut(s) 364, 487, 543, 1246
Kzo9I GATC 5 cut(s) 70, 367, 622, 1033, 1324
LmnI GCTCC 3 cut(s) 386, 608, 1127
Lsp1109I GCAGC 2 cut(s) 642, 741
LweI GCATC 2 cut(s) 423, 1276
MaeI CTAG 4 cut(s) 102, 527, 578, 1271
MaeII ACGT 3 cut(s) 523, 786, 980
MaeIII GTNAC 1 cut(s) 587
MalI GATC 5 cut(s) 72, 369, 624, 1035, 1326
MboI GATC 5 cut(s) 70, 367, 622, 1033, 1324
MboII GAAGA 3 cut(s) 151, 499, 834
MfeI CAATTG 2 cut(s) 336, 749
MflI RGATCY 2 cut(s) 367, 1033
MhlI GDGCHC 1 cut(s) 786
MlyI GAGTC 4 cut(s) 40, 240, 712, 739
MmeI TCCRAC 1 cut(s) 345
MnlI CCTC 8 cut(s) 33, 55, 219, 339, 506, 948, 1206, 1354
MroXI GAANNNNTTC 1 cut(s) 213
MseI TTAA 9 cut(s) 180, 318, 644, 659, 773, 873, 1133, 1193, 1347
MslI CAYNNNNRTG 3 cut(s) 303, 789, 1146
MspCI CTTAAG 1 cut(s) 643
MspI CCGG 1 cut(s) 847
MspR9I CCNGG 1 cut(s) 847
MunI CAATTG 2 cut(s) 336, 749
Mva1269I GAATGC 2 cut(s) 186, 1297
MwoI GCNNNNNNNGC 3 cut(s) 751, 763, 983
NciI CCSGG 1 cut(s) 847
NcoI CCATGG 1 cut(s) 1242
NdeII GATC 5 cut(s) 70, 367, 622, 1033, 1324
NlaIII CATG 4 cut(s) 364, 487, 543, 1246
NlaIV GGNNCC 5 cut(s) 66, 310, 1035, 1123, 1179
NmeAIII GCCGAG 1 cut(s) 536
NspV TTCGAA 1 cut(s) 1172
PaeR7I CTCGAG 1 cut(s) 713
PctI GAATGC 2 cut(s) 186, 1297
PdmI GAANNNNTTC 1 cut(s) 213
PfeI GAWTC 6 cut(s) 115, 209, 345, 406, 490, 1028
PflMI CCANNNNNTGG 1 cut(s) 128
PkrI GCNGC 3 cut(s) 632, 756, 1369
PleI GAGTC 4 cut(s) 40, 240, 712, 738
PmaCI CACGTG 2 cut(s) 787, 981
PmlI CACGTG 2 cut(s) 787, 981
PpsI GAGTC 4 cut(s) 40, 240, 712, 738
Ppu21I YACGTR 2 cut(s) 787, 981
PsiI TTATAA 1 cut(s) 14
PspCI CACGTG 2 cut(s) 787, 981
PspN4I GGNNCC 5 cut(s) 66, 310, 1035, 1123, 1179
PspPI GGNCC 2 cut(s) 309, 1249
PsuI RGATCY 2 cut(s) 367, 1033
RsaI GTAC 1 cut(s) 805
RsaNI GTAC 1 cut(s) 804
RseI CAYNNNNRTG 3 cut(s) 303, 789, 1146
SalI GTCGAC 1 cut(s) 43
SaqAI TTAA 9 cut(s) 180, 318, 644, 659, 773, 873, 1133, 1193, 1347
SatI GCNGC 3 cut(s) 631, 755, 1368
Sau3AI GATC 5 cut(s) 70, 367, 622, 1033, 1324
Sau96I GGNCC 2 cut(s) 309, 1249
SchI GAGTC 4 cut(s) 40, 240, 712, 739
ScrFI CCNGG 1 cut(s) 847
SduI GDGCHC 1 cut(s) 786
SfaNI GCATC 2 cut(s) 423, 1276
Sfr274I CTCGAG 1 cut(s) 713
SfuI TTCGAA 1 cut(s) 1172
SinI GGWCC 2 cut(s) 309, 1249
SlaI CTCGAG 1 cut(s) 713
SmiMI CAYNNNNRTG 3 cut(s) 303, 789, 1146
SmlI CTYRAG 7 cut(s) 37, 248, 583, 643, 713, 727, 779
SmoI CTYRAG 7 cut(s) 37, 248, 583, 643, 713, 727, 779
SpeI ACTAGT 1 cut(s) 101
SsiI CCGC 1 cut(s) 1368
SspI AATATT 2 cut(s) 222, 1308
SspMI CTAG 4 cut(s) 102, 527, 578, 1271
StyD4I CCNGG 1 cut(s) 845
StyI CCWWGG 2 cut(s) 204, 1242
TaaI ACNGT 4 cut(s) 498, 904, 1207, 1375
TaiI ACGT 3 cut(s) 526, 789, 983
TaqI TCGA 5 cut(s) 44, 563, 714, 932, 1172
TatI WGTACW 1 cut(s) 803
TauI GCSGC 1 cut(s) 1370
TfiI GAWTC 6 cut(s) 115, 209, 345, 406, 490, 1028
Tru1I TTAA 9 cut(s) 180, 318, 644, 659, 773, 873, 1133, 1193, 1347
Tru9I TTAA 9 cut(s) 180, 318, 644, 659, 773, 873, 1133, 1193, 1347
TscAI CASTG 4 cut(s) 355, 816, 907, 1378
TseI GCWGC 2 cut(s) 630, 754
TspDTI ATGAA 8 cut(s) 187, 287, 293, 434, 500, 894, 1356, 1368
TspGWI ACGGA 4 cut(s) 74, 321, 759, 830
TspRI CASTG 4 cut(s) 355, 816, 907, 1378
Van91I CCANNNNNTGG 1 cut(s) 128
Vha464I CTTAAG 1 cut(s) 643
VpaK11BI GGWCC 2 cut(s) 309, 1249
XapI RAATTY 3 cut(s) 565, 882, 1263
XhoI CTCGAG 1 cut(s) 713
XmiI GTMKAC 1 cut(s) 44
XmnI GAANNNNTTC 1 cut(s) 213
XspI CTAG 4 cut(s) 102, 527, 578, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.