Rorug07G0337500

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000129
Physical Location & Seq
Forward (+)
37101603 .. 37103735
2133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0337500.1

Sequence Viewer

Length: 2133 bp
ATGAAACGCTCCGTCGATGGTGTCGCCGCCATCTCTTCGTCGTTGCCGCCGAAGAAACCTGTCTTCTTAACCAAAGGCGAACGCGAGAAGTTAGCTCTCCAACGCCGCCAAGAAGAACACGAGGAACAGAAACGCCGCCAGCACCAGCTTCTCTCCAATCTCCGCTCTTCCTCCGATTCGGTCCCCAACAACTCCAATTCCAATTCCGACCGGGACCGGGACCGGGACCGCGATAGGGACCGGGACCGCGACCGATACTCCCGAAGCGATCGAGACCGTGAGCGTGAATTGGAGCGGCGCAACCGTGACCGTGACCGTGACAACCGTGAGAGGGAGCGCGAAGAGGAGGCCAAGGCCCGAGAGCGTGCTCGATTGGACAAATTAGCGGACCGCGAGCGTGATAAGGAGCTTGACGCAATCAAAGAGCAGTATCTGGGCTCGAAGAAGCCGAAGAAGCGTGTTATTAAACCTAGCGAGAAGTTCCGATTCTCTTTCGATTGGGAGAATACAGAGGACACTTCGCGTGATATGAATGCTTTGTACCAAAACCCTCACGAGGCACAGCTCCTGTTTGGGAGAGGGTTTCGTGCCGGAATGGACCGCCGGGAGCAGAAGAAGCTTGCGGTGAAGCAGGAGAGGGAGCTTAGGGATGAGATTCGGAAGAAGGACGGCGTGGAGGAGAGGCCCGAGGAGGCTGCGGCGCAGAGGCTCAAGGAGGAGGCTGCTGAGCTATATGATACTTTTGATATGAGAGTGGATCGGCATTGGACTGATAAGAAGCTGGAGGAGATGACTGAGAGGGACTGGAGGATATTCCGAGAAGACTTCAATATATCCTACAAAGGGTCTAGGATTCCTCGCCCTATGAGGAGTTGGGTTGAGAGTAGATTGAGTACGGAGCTGCTCAAGGCTGTGGAGAGGGCTGGTTATAAGAAGCCTTCTCCCATTCAGATGGCTGCCATTCCTCTGGGCCTGCAACAGCGTGATGTTATCGGCATTGCAGAGACTGGTTCTGGTAAGACTGCTGCCTTTGTTCTTCCTATGTTGACCTATATTTCTAGGTTGCCTCCTATTAGTGAGGAGAATGAGGCTGAAGGTCCTTATGCTGTTGTCATGGCACCTACTCGTGAGCTTGCGCAGCAGATTGAGGAAGAGACTGTCAAGTTTGCGCATTACTTGGGTATTAAAGTGGTTTCTATTGTTGGTGGGCAGTCAATTGAAGAACAGGGTTTTAAAATTAGGCAAGGATGTGAGGTTGTTATTGCTACGCCAGGGCGGTTGATTGATTGTTTGGAGAGGCGTTATGCTGTTTTGAATCAGTGCAATTATGTTGTTCTTGATGAGGCTGATAGGATGATTGATATGGGGTTTGAGCCGCAGGTTATAGGTGTTTTGGATGCAATGCCTTCCAGCAATTTCAAACCTGAGAATGAGGATGAAGAGCTTGATGACAAGAAGATTTACAGAACCACTTATATGTTTAGTGCGACCATGCCTCCTGCGGTGGAGCGCCTTGCTCGGAAGTATTTGAGGAATCCTGTTGTGGTTACAATTGGCACAGCTGGAAAGACTACTGATTTGATCACTCAGAATGTGGTCTGGAGTAAGGATGCAGAGAAGTTTGAGAGGTTAAAGAGATTGCTTGATGAACTTGGTGATAAGACTGCTATTGTGTTTGTTAACACCAAGAAAACTGCTGATTATGTAGCCAAGAGTTTGGATAAGAATGGATATCGTGTGACCACTTTGCATGGGGGGAAATCACAAGACCAGAGAGAAATTAGTCTTGAAGGTTTCAGGACCAGGAGGTACAATGTCCTTGTTGCAACGGATGTTGCTGGACGTGGTATTGATATACCTGATGTGGCCCATGTAATTAATTATGATATGCCCTCAAGTATTGAAACGTACACCCATCGTATTGGACGTACTGGACGTGCAGGGAAGACTGGTGTAGCCACATCATTGTTGACAATTCACGACACTGATGTCTTCTATGATCTCAAGCAGATGCTCATTCAGAGTAACAGTCATGTTCCTCCTGAATTGGCAAAACATGAAGCCTCAAAGTTCAAGCCTGGTTCTATTCCTGATAGGCCACCTAGACGTAATGACACTATCTTTACGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

710

Amino Acids

82.06

Weight (kDa)

8.85

Isoelectric Point (pI)

42.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DDX23 PF25430 163 - 244 2.9e-22 DDX23-like domain
DEAD PF00270 314 - 504 2.4e-46 DEAD/DEAH box helicase
Helicase_C PF00271 539 - 648 1.2e-34 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000129)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_2g02050 FvH4_5g38500 FvH4_5g38520 FvH4_5g38540 FvH4_5g38540 FvH4_5g38540 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38561 FvH4_5g38600 FvH4_5g38620 FvH4_5g38630 FvH4_5g38660 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38680 FvH4_5g38760
malus_domestica MD05G1002100.v1.1 MD05G1002200.v1.1 MD05G1002300.v1.1 MD05G1002400.v1.1 MD07G1123900.v1.1 MD17G1192900.v1.1
prunus_persica Prupe.2G059400_v2.0.a1 Prupe.8G005400_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005500_v2.0.a1 Prupe.8G005600_v2.0.a1 Prupe.8G102900_v2.0.a1
pyrus_communis pycom05g00210 pycom05g00220 pycom05g00230 pycom07g11690
rosa_chinensis RchiOBHm_Chr6g0250791 RchiOBHm_Chr7g0223661 RchiOBHm_Chr7g0240571 RchiOBHm_Chr7g0240581 RchiOBHm_Chr7g0240591 RchiOBHm_Chr7g0240641 RchiOBHm_Chr7g0240681
rosa_laevigata RLG00000000629 RLG00000000630 RLG00000000632 RLG00000000636 RLG00000000637 RLG00000000638 RLG00000000639 RLG00000000640 RLG00000000648 RLG00000000657 RLG00000000661 RLG00000000664 RLG00000000666 RLG00000000669 RLG00000000672 RLG00000000673 RLG00000001954 RLG00000001970 RLG00000007791 RLG00000012997 RLG00000018666
rosa_multiflora Rmu_co8160218.1_g000001 Rmu_co8184794.1_g000001 Rmu_co8275571.1_g000001 Rmu_co8344485.1_g000001 Rmu_co8381261.1_g000001 Rmu_co8395583.1_g000001 Rmu_sc0001070.1_g000010 Rmu_sc0001070.1_g000016 Rmu_sc0001070.1_g000024 Rmu_sc0001070.1_g000025 Rmu_sc0001070.1_g000031 Rmu_sc0001209.1_g000012 Rmu_sc0001483.1_g000003 Rmu_sc0001483.1_g000013 Rmu_sc0001483.1_g000015 Rmu_sc0001921.1_g000013 Rmu_sc0001921.1_g000015 Rmu_sc0001921.1_g000019 Rmu_sc0001921.1_g000027 Rmu_sc0001921.1_g000028 Rmu_sc0001921.1_g000030 Rmu_sc0001924.1_g000001 Rmu_sc0001924.1_g000004 Rmu_sc0002517.1_g000003 Rmu_sc0002517.1_g000014 Rmu_sc0002551.1_g000001 Rmu_sc0002551.1_g000010 Rmu_sc0002551.1_g000031 Rmu_sc0002551.1_g000039 Rmu_sc0002551.1_g000040 Rmu_sc0004799.1_g000007 Rmu_sc0005071.1_g000006 Rmu_sc0005071.1_g000013 Rmu_sc0005071.1_g000019 Rmu_sc0005327.1_g000001 Rmu_sc0005327.1_g000002 Rmu_sc0009028.1_g000001 Rmu_sc0013246.1_g000001 Rmu_sc0014401.1_g000001 Rmu_sc0019569.1_g000001 Rmu_sc0019569.1_g000003 Rmu_sc0019569.1_g000004 Rmu_sc0020672.1_g000001 Rmu_sc0023716.1_g000001 Rmu_sc0037115.1_g000001 Rmu_sc0038364.1_g000001 Rmu_ssc0000011.1_g000037
rosa_roxburghii Rroxscaffold_2G00121840 Rroxscaffold_2G00121850 Rroxscaffold_2G00121870 Rroxscaffold_3G00219670 Rroxscaffold_3G00219690 Rroxscaffold_3G00219710 Rroxscaffold_3G00219770 Rroxscaffold_3G00219810 Rroxscaffold_3G00219820 Rroxscaffold_3G00219850 Rroxscaffold_3G00219870 Rroxscaffold_3G00231380 Rroxscaffold_3G00235440 Rroxscaffold_3G00236130 Rroxscaffold_3G00236140 Rroxscaffold_3G00236270 Rroxscaffold_3G00236280 Rroxscaffold_3G00240810
rosa_rugosa Rorug02G0237100 Rorug07G0218500 Rorug07G0218600 Rorug07G0218600 Rorug07G0218700 Rorug07G0323600 Rorug07G0337100 Rorug07G0337200 Rorug07G0337500 Rorug07G0337700 Rorug07G0337800 Rorug07G0337800 Rorug07G0338000 Rorug07G0338100 Rorug07G0338200 Rorug07G0338300
rosa_samantha Rh1BG151400 Rh2CG282500 Rh2DG318800 Rh2DG318900 Rh2DG319100 Rh5BG508500 Rh6BG254000 Rh6DG245200 Rh7AG361400 Rh7AG491500 Rh7AG492000 Rh7AG492300 Rh7AG492400 Rh7AG492500 Rh7AG492800 Rh7BG464100 Rh7BG464500 Rh7BG464700 Rh7BG464800 Rh7CG379900 Rh7CG507500 Rh7CG508000 Rh7CG508700 Rh7CG508900 Rh7CG509900 Rh7CG510400 Rh7CG510500 Rh7CG510600 Rh7CG510700 Rh7CG511000 Rh7CG511200
rosa_wichuraiana Rw0G005770 Rw7G041180 Rw7G041190 Rw7G041250 Rw7G041270 Rw7G041280 Rw7G041300 Rw7G041330 Rw7G041410 Rw7G041420 Rw7G041440 Rw7G041460 Rw7G041470 Rw7G041480 Rw7G041500 Rw7G041530 Rw7G041540 Rw7G041570 Rw7G041580 Rw7G041600 Rw7G041630 Rw7G041660 Rw7G041680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 930
AasI GACNNNNNNGTC 1 cut(s) 1988
Acc16I TGCGCA 2 cut(s) 1137, 1170
Acc36I ACCTGC 1 cut(s) 1369
AccB1I GGYRCC 1 cut(s) 1117
AccBSI CCGCTC 2 cut(s) 165, 295
AccII CGCG 6 cut(s) 84, 231, 249, 339, 393, 523
AclWI GGATC 1 cut(s) 765
AcuI CTGAAG 1 cut(s) 1113
AfaI GTAC 5 cut(s) 542, 895, 1811, 1910, 1930
AfiI CCNNNNNNNGG 6 cut(s) 217, 223, 235, 331, 556, 843
AgsI TTSAA 7 cut(s) 829, 1220, 1315, 1420, 1790, 1904, 2074
AjiI CACGTC 2 cut(s) 1844, 1937
AjnI CCWGG 3 cut(s) 1270, 1802, 2077
Alw21I GWGCWC 1 cut(s) 370
Alw26I GTCTC 3 cut(s) 267, 998, 1148
AlwI GGATC 1 cut(s) 765
AlwNI CAGNNNCTG 3 cut(s) 433, 568, 1007
Ama87I CYCGRG 2 cut(s) 357, 686
AoxI GGCC 6 cut(s) 348, 354, 683, 970, 1866, 2096
ApeKI GCWGC 6 cut(s) 695, 722, 901, 956, 1025, 1138
ArsI GACNNNNNNTTYG 2 cut(s) 1561, 1593
AseI ATTAAT 1 cut(s) 1878
AspLEI GCGC 6 cut(s) 300, 339, 703, 1138, 1171, 1512
AsuC2I CCSGG 5 cut(s) 212, 218, 224, 242, 605
AsuHPI GGTGA 2 cut(s) 637, 1667
AvaI CYCGRG 2 cut(s) 357, 686
BanI GGYRCC 1 cut(s) 1117
BanII GRGCYC 1 cut(s) 440
BauI CACGAG 3 cut(s) 119, 554, 1125
BbsI GAAGAC 4 cut(s) 55, 828, 1952, 1984
Bbv12I GWGCWC 1 cut(s) 370
BbvI GCAGC 6 cut(s) 682, 709, 888, 943, 1012, 1150
BccI CCATC 4 cut(s) 11, 38, 946, 1923
BceAI ACGGC 1 cut(s) 685
BcgI CGANNNNNNTGC 2 cut(s) 677, 711
BciT130I CCWGG 3 cut(s) 1272, 1804, 2079
BclI TGATCA 1 cut(s) 1581
BcnI CCSGG 5 cut(s) 212, 218, 224, 242, 605
BcoDI GTCTC 3 cut(s) 267, 998, 1148
BfaI CTAG 4 cut(s) 471, 849, 1059, 2103
BfoI RGCGCY 1 cut(s) 1513
BfuAI ACCTGC 1 cut(s) 1369
BlpI GCTNAGC 1 cut(s) 726
Bme1390I CCNGG 8 cut(s) 212, 218, 224, 242, 605, 1272, 1804, 2079
BmeT110I CYCGRG 2 cut(s) 357, 686
BmgBI CACGTC 2 cut(s) 1844, 1937
BmiI GGNNCC 7 cut(s) 183, 215, 221, 227, 239, 245, 1119
BmrFI CCNGG 8 cut(s) 212, 218, 224, 242, 605, 1272, 1804, 2079
BmsI GCATC 3 cut(s) 1387, 1600, 2001
BpiI GAAGAC 4 cut(s) 55, 828, 1952, 1984
BpmI CTGGAG 3 cut(s) 803, 826, 1621
Bpu10I CCTNAGC 1 cut(s) 644
Bpu1102I GCTNAGC 1 cut(s) 726
BpuEI CTTGAG 4 cut(s) 695, 890, 1879, 1988
BpuMI CCSGG 5 cut(s) 212, 218, 224, 242, 605
BsaI GGTCTC 1 cut(s) 267
BsaJI CCNNGG 3 cut(s) 351, 687, 1271
BsaXI ACNNNNNCTCC 4 cut(s) 242, 272, 1480, 1510
Bsc4I CCNNNNNNNGG 6 cut(s) 217, 223, 235, 331, 556, 843
Bse1I ACTGG 4 cut(s) 809, 1012, 1936, 1954
Bse3DI GCAATG 2 cut(s) 996, 1407
BseBI CCWGG 3 cut(s) 1272, 1804, 2079
BseDI CCNNGG 3 cut(s) 351, 687, 1271
BseGI GGATG 7 cut(s) 655, 1253, 1359, 1402, 1441, 1615, 1837
BseLI CCNNNNNNNGG 6 cut(s) 217, 223, 235, 331, 556, 843
BseMI GCAATG 2 cut(s) 996, 1407
BseMII CTCAG 4 cut(s) 717, 786, 1416, 1601
BseNI ACTGG 4 cut(s) 809, 1012, 1936, 1954
BseRI GAGGAG 7 cut(s) 359, 692, 704, 731, 800, 883, 1094
BseXI GCAGC 6 cut(s) 682, 709, 888, 943, 1012, 1150
BsgI GTGCAG 1 cut(s) 1959
Bsh1236I CGCG 6 cut(s) 84, 231, 249, 339, 393, 523
Bsh1285I CGRYCG 3 cut(s) 211, 253, 271
BshFI GGCC 6 cut(s) 350, 356, 685, 972, 1868, 2098
BshNI GGYRCC 1 cut(s) 1117
BsiEI CGRYCG 3 cut(s) 211, 253, 271
BsiHKAI GWGCWC 1 cut(s) 370
BsiHKCI CYCGRG 2 cut(s) 357, 686
BsiSI CCGG 6 cut(s) 211, 217, 223, 241, 591, 604
BslFI GGGAC 7 cut(s) 167, 227, 233, 239, 251, 257, 815
BslI CCNNNNNNNGG 6 cut(s) 217, 223, 235, 331, 556, 843
BsmAI GTCTC 3 cut(s) 267, 998, 1148
BsmFI GGGAC 7 cut(s) 167, 227, 233, 239, 251, 257, 815
BsmI GAATGC 1 cut(s) 538
BsnI GGCC 6 cut(s) 350, 356, 685, 972, 1868, 2098
Bso31I GGTCTC 1 cut(s) 267
BsoBI CYCGRG 2 cut(s) 357, 686
Bsp1286I GDGCHC 2 cut(s) 370, 440
Bsp143I GATC 4 cut(s) 268, 757, 1581, 1999
Bsp1720I GCTNAGC 1 cut(s) 726
BspANI GGCC 6 cut(s) 350, 356, 685, 972, 1868, 2098
BspCNI CTCAG 4 cut(s) 718, 787, 1417, 1600
BspFNI CGCG 6 cut(s) 84, 231, 249, 339, 393, 523
BspLI GGNNCC 7 cut(s) 183, 215, 221, 227, 239, 245, 1119
BspMI ACCTGC 1 cut(s) 1369
BspPI GGATC 1 cut(s) 765
BspQI GCTCTTC 2 cut(s) 172, 1434
BspT107I GGYRCC 1 cut(s) 1117
BspTNI GGTCTC 1 cut(s) 267
BsrBI CCGCTC 2 cut(s) 165, 295
BsrDI GCAATG 2 cut(s) 996, 1407
BsrI ACTGG 4 cut(s) 809, 1012, 1936, 1954
BssECI CCNNGG 3 cut(s) 351, 687, 1271
BssMI GATC 4 cut(s) 268, 757, 1581, 1999
BssSI CACGAG 3 cut(s) 119, 554, 1125
BssT1I CCWWGG 1 cut(s) 351
Bst2BI CACGAG 3 cut(s) 119, 554, 1125
Bst2UI CCWGG 3 cut(s) 1272, 1804, 2079
Bst4CI ACNGT 7 cut(s) 278, 305, 311, 317, 326, 1159, 2030
Bst6I CTCTTC 5 cut(s) 40, 172, 336, 1146, 1434
BstC8I GCNNGC 6 cut(s) 140, 366, 395, 621, 974, 1134
BstDEI CTNAG 5 cut(s) 644, 726, 795, 1425, 1587
BstF5I GGATG 7 cut(s) 655, 1253, 1359, 1402, 1441, 1615, 1837
BstFNI CGCG 6 cut(s) 84, 231, 249, 339, 393, 523
BstH2I RGCGCY 1 cut(s) 1513
BstHHI GCGC 6 cut(s) 300, 339, 703, 1138, 1171, 1512
BstKTI GATC 4 cut(s) 271, 760, 1584, 2002
BstMAI GTCTC 3 cut(s) 267, 998, 1148
BstMBI GATC 4 cut(s) 268, 757, 1581, 1999
BstMCI CGRYCG 3 cut(s) 211, 253, 271
BstMWI GCNNNNNNNGC 3 cut(s) 454, 616, 1138
BstNI CCWGG 3 cut(s) 1272, 1804, 2079
BstSCI CCNGG 8 cut(s) 210, 216, 222, 240, 603, 1270, 1802, 2077
BstUI CGCG 6 cut(s) 84, 231, 249, 339, 393, 523
BstV1I GCAGC 6 cut(s) 682, 709, 888, 943, 1012, 1150
BstV2I GAAGAC 4 cut(s) 55, 828, 1952, 1984
BstXI CCANNNNNNTGG 4 cut(s) 952, 967, 1717, 1922
BsuRI GGCC 6 cut(s) 350, 356, 685, 972, 1868, 2098
BtrI CACGTC 2 cut(s) 1844, 1937
BtsCI GGATG 7 cut(s) 655, 1253, 1359, 1402, 1441, 1615, 1837
BtsIMutI CAGTG 2 cut(s) 1325, 1983
BveI ACCTGC 1 cut(s) 1369
Cac8I GCNNGC 6 cut(s) 140, 366, 395, 621, 974, 1134
CaiI CAGNNNCTG 3 cut(s) 433, 568, 1007
CfoI GCGC 6 cut(s) 300, 339, 703, 1138, 1171, 1512
CpoI CGGWCCG 1 cut(s) 388
CseI GACGC 1 cut(s) 422
Csp6I GTAC 5 cut(s) 541, 894, 1810, 1909, 1929
CspI CGGWCCG 1 cut(s) 388
CviAII CATG 6 cut(s) 1114, 1492, 1751, 1871, 2033, 2057
CviQI GTAC 5 cut(s) 541, 894, 1810, 1909, 1929
DdeI CTNAG 5 cut(s) 644, 726, 795, 1425, 1587
DpnI GATC 4 cut(s) 270, 759, 1583, 2001
DpnII GATC 4 cut(s) 268, 757, 1581, 1999
DraI TTTAAA 1 cut(s) 1234
DrdI GACNNNNNNGTC 1 cut(s) 1988
DseDI GACNNNNNNGTC 1 cut(s) 1988
Eam1104I CTCTTC 5 cut(s) 40, 172, 336, 1146, 1434
EarI CTCTTC 5 cut(s) 40, 172, 336, 1146, 1434
Eco130I CCWWGG 1 cut(s) 351
Eco24I GRGCYC 1 cut(s) 440
Eco31I GGTCTC 1 cut(s) 267
Eco32I GATATC 1 cut(s) 1733
Eco57I CTGAAG 1 cut(s) 1113
Eco88I CYCGRG 2 cut(s) 357, 686
EcoO109I RGGNCCY 1 cut(s) 1097
EcoRII CCWGG 3 cut(s) 1270, 1802, 2077
EcoRV GATATC 1 cut(s) 1733
EcoT14I CCWWGG 1 cut(s) 351
EcoT38I GRGCYC 1 cut(s) 440
ErhI CCWWGG 1 cut(s) 351
FaeI CATG 6 cut(s) 1117, 1495, 1754, 1874, 2036, 2060
FaqI GGGAC 7 cut(s) 167, 227, 233, 239, 251, 257, 815
FatI CATG 6 cut(s) 1113, 1491, 1750, 1870, 2032, 2056
FbaI TGATCA 1 cut(s) 1581
FokI GGATG 7 cut(s) 662, 1260, 1366, 1409, 1448, 1622, 1844
FriOI GRGCYC 1 cut(s) 440
FspBI CTAG 4 cut(s) 471, 849, 1059, 2103
FspI TGCGCA 2 cut(s) 1137, 1170
GlaI GCGC 6 cut(s) 299, 338, 702, 1137, 1170, 1511
GsuI CTGGAG 3 cut(s) 803, 826, 1621
HaeII RGCGCY 1 cut(s) 1513
HaeIII GGCC 6 cut(s) 350, 356, 685, 972, 1868, 2098
HapII CCGG 6 cut(s) 211, 217, 223, 241, 591, 604
HgaI GACGC 1 cut(s) 422
HhaI GCGC 6 cut(s) 300, 339, 703, 1138, 1171, 1512
Hin1II CATG 6 cut(s) 1117, 1495, 1754, 1874, 2036, 2060
Hin6I GCGC 6 cut(s) 298, 337, 701, 1136, 1169, 1510
HinP1I GCGC 6 cut(s) 298, 337, 701, 1136, 1169, 1510
HincII GTYRAC 3 cut(s) 1047, 1681, 1971
HindII GTYRAC 3 cut(s) 1047, 1681, 1971
HindIII AAGCTT 1 cut(s) 617
HinfI GANTC 6 cut(s) 176, 486, 655, 853, 1315, 1534
HpaI GTTAAC 1 cut(s) 1681
HpaII CCGG 6 cut(s) 211, 217, 223, 241, 591, 604
HphI GGTGA 2 cut(s) 637, 1667
Hpy166II GTNNAC 4 cut(s) 1047, 1681, 1911, 1971
Hpy188I TCNGA 9 cut(s) 175, 208, 485, 660, 818, 951, 1521, 1590, 2022
Hpy8I GTNNAC 4 cut(s) 1047, 1681, 1911, 1971
Hpy99I CGWCG 2 cut(s) 17, 43
HpyAV CCTTC 5 cut(s) 658, 948, 1088, 1416, 1784
HpyCH4III ACNGT 7 cut(s) 278, 305, 311, 317, 326, 1159, 2030
HpyCH4IV ACGT 5 cut(s) 1843, 1907, 1927, 1936, 2107
HpyCH4V TGCA 8 cut(s) 976, 1001, 1323, 1400, 1613, 1750, 1826, 1940
HpyF10VI GCNNNNNNNGC 3 cut(s) 454, 616, 1138
HpyF3I CTNAG 5 cut(s) 644, 726, 795, 1425, 1587
HpySE526I ACGT 5 cut(s) 1843, 1907, 1927, 1936, 2107
Hsp92II CATG 6 cut(s) 1117, 1495, 1754, 1874, 2036, 2060
HspAI GCGC 6 cut(s) 298, 337, 701, 1136, 1169, 1510
Ksp22I TGATCA 1 cut(s) 1581
KspAI GTTAAC 1 cut(s) 1681
Kzo9I GATC 4 cut(s) 268, 757, 1581, 1999
LguI GCTCTTC 2 cut(s) 172, 1434
LmnI GCTCC 9 cut(s) 14, 292, 334, 406, 570, 607, 640, 898, 1507
Lsp1109I GCAGC 6 cut(s) 682, 709, 888, 943, 1012, 1150
LweI GCATC 3 cut(s) 1387, 1600, 2001
MaeI CTAG 4 cut(s) 471, 849, 1059, 2103
MaeII ACGT 5 cut(s) 1843, 1907, 1927, 1936, 2107
MaeIII GTNAC 6 cut(s) 305, 311, 317, 1546, 1738, 2024
MalI GATC 4 cut(s) 270, 759, 1583, 2001
MbiI CCGCTC 2 cut(s) 165, 295
MboI GATC 4 cut(s) 268, 757, 1581, 1999
MfeI CAATTG 2 cut(s) 1215, 1551
MhlI GDGCHC 2 cut(s) 370, 440
MmeI TCCRAC 2 cut(s) 124, 231
MseI TTAA 7 cut(s) 68, 465, 1185, 1233, 1631, 1680, 1878
MslI CAYNNNNRTG 2 cut(s) 950, 1475
MspA1I CMGCKG 1 cut(s) 1562
MspI CCGG 6 cut(s) 211, 217, 223, 241, 591, 604
MspR9I CCNGG 8 cut(s) 212, 218, 224, 242, 605, 1272, 1804, 2079
MunI CAATTG 2 cut(s) 1215, 1551
Mva1269I GAATGC 1 cut(s) 538
MvaI CCWGG 3 cut(s) 1272, 1804, 2079
MvnI CGCG 6 cut(s) 84, 231, 249, 339, 393, 523
MwoI GCNNNNNNNGC 3 cut(s) 454, 616, 1138
NciI CCSGG 5 cut(s) 212, 218, 224, 242, 605
NdeII GATC 4 cut(s) 268, 757, 1581, 1999
NlaIII CATG 6 cut(s) 1117, 1495, 1754, 1874, 2036, 2060
NlaIV GGNNCC 7 cut(s) 183, 215, 221, 227, 239, 245, 1119
NmuCI GTSAC 4 cut(s) 305, 311, 317, 1738
NsbI TGCGCA 2 cut(s) 1137, 1170
PciSI GCTCTTC 2 cut(s) 172, 1434
PcsI WCGNNNNNNNCGW 4 cut(s) 47, 446, 1924, 1933
PctI GAATGC 1 cut(s) 538
PfeI GAWTC 6 cut(s) 176, 486, 655, 853, 1315, 1534
Ple19I CGATCG 1 cut(s) 271
PpuMI RGGWCCY 1 cut(s) 1097
PshBI ATTAAT 1 cut(s) 1878
PsiI TTATAA 1 cut(s) 930
Psp5II RGGWCCY 1 cut(s) 1097
Psp6I CCWGG 3 cut(s) 1270, 1802, 2077
PspGI CCWGG 3 cut(s) 1270, 1802, 2077
PspN4I GGNNCC 7 cut(s) 183, 215, 221, 227, 239, 245, 1119
PspPPI RGGWCCY 1 cut(s) 1097
PstNI CAGNNNCTG 3 cut(s) 433, 568, 1007
PvuI CGATCG 1 cut(s) 271
PvuII CAGCTG 1 cut(s) 1562
RsaI GTAC 5 cut(s) 542, 895, 1811, 1910, 1930
RsaNI GTAC 5 cut(s) 541, 894, 1810, 1909, 1929
RseI CAYNNNNRTG 2 cut(s) 950, 1475
Rsr2I CGGWCCG 1 cut(s) 388
RsrII CGGWCCG 1 cut(s) 388
SapI GCTCTTC 2 cut(s) 172, 1434
SaqAI TTAA 7 cut(s) 68, 465, 1185, 1233, 1631, 1680, 1878
Sau3AI GATC 4 cut(s) 268, 757, 1581, 1999
ScrFI CCNGG 8 cut(s) 212, 218, 224, 242, 605, 1272, 1804, 2079
SduI GDGCHC 2 cut(s) 370, 440
SfaNI GCATC 3 cut(s) 1387, 1600, 2001
SmiMI CAYNNNNRTG 2 cut(s) 950, 1475
SmlI CTYRAG 4 cut(s) 710, 905, 1894, 2003
SmoI CTYRAG 4 cut(s) 710, 905, 1894, 2003
SspMI CTAG 4 cut(s) 471, 849, 1059, 2103
StyD4I CCNGG 8 cut(s) 210, 216, 222, 240, 603, 1270, 1802, 2077
StyI CCWWGG 1 cut(s) 351
TaaI ACNGT 7 cut(s) 278, 305, 311, 317, 326, 1159, 2030
TaiI ACGT 5 cut(s) 1846, 1910, 1930, 1939, 2110
TaqI TCGA 5 cut(s) 15, 271, 370, 440, 495
TaqII GACCGA 2 cut(s) 169, 267
TauI GCSGC 7 cut(s) 29, 49, 108, 138, 298, 701, 1378
TfiI GAWTC 6 cut(s) 176, 486, 655, 853, 1315, 1534
Tru1I TTAA 7 cut(s) 68, 465, 1185, 1233, 1631, 1680, 1878
Tru9I TTAA 7 cut(s) 68, 465, 1185, 1233, 1631, 1680, 1878
TscAI CASTG 2 cut(s) 1325, 1990
TseFI GTSAC 4 cut(s) 305, 311, 317, 1738
TseI GCWGC 6 cut(s) 695, 722, 901, 956, 1025, 1138
Tsp45I GTSAC 4 cut(s) 305, 311, 317, 1738
TspDTI ATGAA 5 cut(s) 17, 545, 1452, 1662, 2073
TspGWI ACGGA 2 cut(s) 911, 1844
TspRI CASTG 2 cut(s) 1325, 1990
VspI ATTAAT 1 cut(s) 1878
XspI CTAG 4 cut(s) 471, 849, 1059, 2103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.