FvH4_3g10570

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000119
Physical Location & Seq
Reverse (-)
6304860 .. 6309353
4494 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10570.t1

Sequence Viewer

Length: 1602 bp
ATGACGCCTGCATCGCCCGACGCGCTAGGAAGGAACGTTTCATGCACGAACCAACCGCAGCGACGTGCTAAGCGCTTGACTCCACCGACAAGGAGACAGGGACCAAGCCTGAGGGCGCTCGCCTCCCTTTCTTCGACGCCGGAGGAGGCCTGGTCCACTCGCTGCAGAGGTGGCGCAAGGCAGGGGGGCTGTGCGTGCATGCAGAGCTGCTGGGCGTGCTCGCCGTCAGAAGGTTCGCCGTCGGCCGTCAAGAGCAGAATCGACTGGGTGCCCAGAGCAGAATCGATTGGCGTCACACGGAGAAGGATGTACAATTTTGACAATATTGAGAAGGAATCGCAAGATCCCCCATGGAGAGACCGAGATTCTTTTTCAACAAAACAAAATTTGGAAGGAAAACTTCTTTCAGTTTCATTCTGGAATAAGATGTTCGTAATCGCATGTGTGATTGCAGTCTCACTAGACCCATTGTTCTTCTACATTCCCATCATCGATGGAGAAGAAAAGTGCCTTGGAGTAGACAAAGAGTTGAGGACTATAGCTCTCATTCTGCGATCTCTCACTGATGTTACTATCGTTGTGAATATCATATATCATGTTTGCATCGCCATTAACGCTGCTTACAAAGCACACAAAGGAAATAAGAATGAATTAGAATGGGATTGGGAATTTTCAAAGGTATCGGCAGCTGAGATAATTCCATTTGCTAAATTAGTTGCTTGGAAGCTAGCATGGCACTATACGCTAACCAGCATTTTAGCTGTTTTTCCAATGCCACAGTTTCTTTTAGTATTTGTCTTCTACAACATGAGAGGCCGTGGTTACTTGGAGCGTAGAAAAATTCTCAATGTCTTTCTCCTCGCTCAATACCTGCCAAGGATTTATCGAATTTACCGATCATCTCAGAATCTCAGACAAACTACTGGAATATGGGCTAAAGCATTGTTTAATTTTTTCTTATATCTCCTTGCAAGTCATACATTTATATCCATGGAAACTCAAAGATGGGAGGAGATAAGAAACAAGATACAGTTAAAGGAGAGAGATATATTAGGATGGATGGAAAGAAATGACCTCCCAGACGATATGAAGAAACAAATTATGAAGAACATAAACGATAAACTGGAAGAGAACAAAGATGCTGATCTTGAGAATATATTCTCTATTCTTCCGCTAATTCTGCGATCCATTATTCCGTACGTACCAAAGCTTGAAAGGATGGATGAAATAGTGTTGCAAATGATGTGCGACAATCTAAAGCCGGTGATATACGCCGAGGACACCCCGCTATTTCAAATTGGAGATCCGATACGTAGCATGCTACTCATTACAGAAGGTACATTATTCATATACAGAACTACCAGTAATGATAGTTGTGTCGCATCTGAGAACGCAAAAAGGGGTAGTATTTCAAGTTCCCCATCAGGTAGCAACCTTGGCAAAGGTGACTTCTACGGCGTGGAAGAACTGATCGAGTGGGTAACACAAGACAAGGATTTTAGCCAGCTTCCCCAACTCTGCCTTCAATGTGAAATGCGATTCAAAAGTAGAAGGCTTTGTTCTGACGGCCAAGGACTTGAAAAGTGTAGTTGCCAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

534

Amino Acids

61.14

Weight (kDa)

8.74

Isoelectric Point (pI)

61.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 879
AccB1I GGYRCC 1 cut(s) 268
AccI GTMKAC 1 cut(s) 519
AccII CGCG 1 cut(s) 23
AciI CCGC 3 cut(s) 56, 1172, 1286
AclI AACGTT 1 cut(s) 36
AclWI GGATC 3 cut(s) 338, 1179, 1298
AcoI YGGCCR 2 cut(s) 243, 1567
AcsI RAATTY 4 cut(s) 385, 668, 840, 888
AcyI GRCGYC 3 cut(s) 5, 137, 291
AfaI GTAC 4 cut(s) 311, 1199, 1203, 1339
AfeI AGCGCT 1 cut(s) 74
AfiI CCNNNNNNNGG 1 cut(s) 230
AgsI TTSAA 8 cut(s) 375, 675, 1214, 1295, 1413, 1526, 1543, 1580
AjiI CACGTC 1 cut(s) 65
AjnI CCWGG 1 cut(s) 149
AjuI GAANNNNNNNTTGG 4 cut(s) 495, 527, 1506, 1538
AluBI AGCT 7 cut(s) 207, 542, 689, 727, 761, 1210, 1507
AluI AGCT 7 cut(s) 207, 542, 689, 727, 761, 1210, 1507
Alw21I GWGCWC 1 cut(s) 221
Alw26I GTCTC 3 cut(s) 88, 351, 460
AlwI GGATC 3 cut(s) 338, 1179, 1298
Aor51HI AGCGCT 1 cut(s) 74
AoxI GGCC 4 cut(s) 147, 243, 814, 1567
ApeKI GCWGC 5 cut(s) 58, 162, 207, 617, 686
ApoI RAATTY 4 cut(s) 385, 668, 840, 888
Asp700I GAANNNNTTC 1 cut(s) 1157
AspLEI GCGC 4 cut(s) 25, 75, 118, 176
AspS9I GGNCC 2 cut(s) 101, 153
AsuHPI GGTGA 2 cut(s) 1276, 1457
AsuNHI GCTAGC 1 cut(s) 727
AvaII GGWCC 2 cut(s) 101, 153
AxyI CCTNAGG 1 cut(s) 110
BaeGI GKGCMC 1 cut(s) 273
BanI GGYRCC 1 cut(s) 268
BbsI GAAGAC 1 cut(s) 790
Bbv12I GWGCWC 1 cut(s) 221
BbvI GCAGC 5 cut(s) 70, 149, 194, 604, 698
BccI CCATC 7 cut(s) 488, 494, 999, 1050, 1054, 1213, 1429
BceAI ACGGC 6 cut(s) 208, 223, 230, 801, 1471, 1582
BciT130I CCWGG 1 cut(s) 151
BcoDI GTCTC 3 cut(s) 88, 351, 460
BfaI CTAG 3 cut(s) 26, 461, 728
BfmI CTRYAG 2 cut(s) 163, 537
BfoI RGCGCY 2 cut(s) 76, 119
BfuAI ACCTGC 1 cut(s) 879
BisI GCNGC 5 cut(s) 59, 163, 208, 618, 687
BlpI GCTNAGC 1 cut(s) 69
BlsI GCNGC 5 cut(s) 60, 164, 209, 619, 688
Bme1390I CCNGG 1 cut(s) 151
Bme18I GGWCC 2 cut(s) 101, 153
BmgBI CACGTC 1 cut(s) 65
BmgT120I GGNCC 2 cut(s) 101, 153
BmiI GGNNCC 2 cut(s) 102, 270
BmrFI CCNGG 1 cut(s) 151
BmrI ACTGGG 1 cut(s) 274
BmsI GCATC 4 cut(s) 20, 612, 1129, 1391
BmtI GCTAGC 1 cut(s) 731
BmuI ACTGGG 1 cut(s) 274
BpiI GAAGAC 1 cut(s) 790
Bpu1102I GCTNAGC 1 cut(s) 69
BpuEI CTTGAG 1 cut(s) 1169
Bsa29I ATCGAT 2 cut(s) 284, 492
BsaAI YACGTR 2 cut(s) 1201, 1313
BsaBI GATNNNNATC 1 cut(s) 1143
BsaHI GRCGYC 3 cut(s) 5, 137, 291
BsaI GGTCTC 1 cut(s) 351
BsaJI CCNNGG 8 cut(s) 350, 511, 817, 875, 990, 1275, 1435, 1570
BsaXI ACNNNNNCTCC 2 cut(s) 137, 167
Bsc4I CCNNNNNNNGG 1 cut(s) 230
Bse118I RCCGGY 1 cut(s) 1261
Bse1I ACTGG 4 cut(s) 269, 928, 1128, 1362
Bse21I CCTNAGG 1 cut(s) 110
Bse8I GATNNNNATC 1 cut(s) 1143
BseBI CCWGG 1 cut(s) 151
BseCI ATCGAT 2 cut(s) 284, 492
BseDI CCNNGG 8 cut(s) 350, 511, 817, 875, 990, 1275, 1435, 1570
BseGI GGATG 5 cut(s) 312, 1061, 1065, 1224, 1228
BseJI GATNNNNATC 1 cut(s) 1143
BseLI CCNNNNNNNGG 1 cut(s) 230
BseMII CTCAG 5 cut(s) 101, 681, 917, 925, 1377
BseNI ACTGG 4 cut(s) 269, 928, 1128, 1362
BseRI GAGGAG 3 cut(s) 158, 848, 1025
BseSI GKGCMC 1 cut(s) 273
BseX3I CGGCCG 1 cut(s) 243
BseXI GCAGC 5 cut(s) 70, 149, 194, 604, 698
BseYI CCCAGC 1 cut(s) 210
Bsh1236I CGCG 1 cut(s) 23
Bsh1285I CGRYCG 1 cut(s) 246
BshFI GGCC 4 cut(s) 149, 245, 816, 1569
BshNI GGYRCC 1 cut(s) 268
BshVI ATCGAT 2 cut(s) 284, 492
BsiEI CGRYCG 1 cut(s) 246
BsiHKAI GWGCWC 1 cut(s) 221
BsiSI CCGG 2 cut(s) 140, 1262
BsiWI CGTACG 1 cut(s) 1197
BslFI GGGAC 1 cut(s) 114
BslI CCNNNNNNNGG 1 cut(s) 230
BsmAI GTCTC 3 cut(s) 88, 351, 460
BsmFI GGGAC 1 cut(s) 114
BsnI GGCC 4 cut(s) 149, 245, 816, 1569
Bso31I GGTCTC 1 cut(s) 351
Bsp1286I GDGCHC 2 cut(s) 221, 273
Bsp1407I TGTACA 1 cut(s) 309
Bsp143I GATC 7 cut(s) 343, 554, 896, 1144, 1184, 1303, 1470
Bsp1720I GCTNAGC 1 cut(s) 69
Bsp19I CCATGG 2 cut(s) 350, 990
BspACI CCGC 3 cut(s) 56, 1172, 1286
BspANI GGCC 4 cut(s) 149, 245, 816, 1569
BspCNI CTCAG 5 cut(s) 102, 682, 916, 924, 1378
BspDI ATCGAT 2 cut(s) 284, 492
BspFNI CGCG 1 cut(s) 23
BspLI GGNNCC 2 cut(s) 102, 270
BspMAI CTGCAG 1 cut(s) 167
BspMI ACCTGC 1 cut(s) 879
BspOI GCTAGC 1 cut(s) 731
BspPI GGATC 3 cut(s) 338, 1179, 1298
BspT107I GGYRCC 1 cut(s) 268
BspTNI GGTCTC 1 cut(s) 351
BsrFI RCCGGY 1 cut(s) 1261
BsrGI TGTACA 1 cut(s) 309
BsrI ACTGG 4 cut(s) 269, 928, 1128, 1362
BssAI RCCGGY 1 cut(s) 1261
BssECI CCNNGG 8 cut(s) 350, 511, 817, 875, 990, 1275, 1435, 1570
BssMI GATC 7 cut(s) 343, 554, 896, 1144, 1184, 1303, 1470
BssNI GRCGYC 3 cut(s) 5, 137, 291
BssT1I CCWWGG 6 cut(s) 350, 511, 875, 990, 1435, 1570
Bst2UI CCWGG 1 cut(s) 151
Bst4CI ACNGT 2 cut(s) 780, 1032
Bst6I CTCTTC 1 cut(s) 1122
BstACI GRCGYC 3 cut(s) 5, 137, 291
BstAUI TGTACA 1 cut(s) 309
BstBAI YACGTR 2 cut(s) 1201, 1313
BstC8I GCNNGC 9 cut(s) 9, 120, 196, 200, 217, 221, 729, 1319, 1505
BstDEI CTNAG 6 cut(s) 69, 110, 690, 903, 911, 1386
BstDSI CCRYGG 3 cut(s) 350, 817, 990
BstF5I GGATG 5 cut(s) 312, 1061, 1065, 1224, 1228
BstFNI CGCG 1 cut(s) 23
BstH2I RGCGCY 2 cut(s) 76, 119
BstHHI GCGC 4 cut(s) 25, 75, 118, 176
BstKTI GATC 7 cut(s) 346, 557, 899, 1147, 1187, 1306, 1473
BstMAI GTCTC 3 cut(s) 88, 351, 460
BstMBI GATC 7 cut(s) 343, 554, 896, 1144, 1184, 1303, 1470
BstMCI CGRYCG 1 cut(s) 246
BstNI CCWGG 1 cut(s) 151
BstNSI RCATGY 3 cut(s) 202, 444, 1321
BstSCI CCNGG 1 cut(s) 149
BstSFI CTRYAG 2 cut(s) 163, 537
BstSLI GKGCMC 1 cut(s) 273
BstSNI TACGTA 2 cut(s) 1201, 1313
BstUI CGCG 1 cut(s) 23
BstV1I GCAGC 5 cut(s) 70, 149, 194, 604, 698
BstV2I GAAGAC 1 cut(s) 790
BstX2I RGATCY 2 cut(s) 343, 1303
BstYI RGATCY 2 cut(s) 343, 1303
BstZI CGGCCG 1 cut(s) 243
Bsu15I ATCGAT 2 cut(s) 284, 492
Bsu36I CCTNAGG 1 cut(s) 110
BsuRI GGCC 4 cut(s) 149, 245, 816, 1569
BsuTUI ATCGAT 2 cut(s) 284, 492
BtgI CCRYGG 3 cut(s) 350, 817, 990
BtgZI GCGATG 1 cut(s) 589
BtrI CACGTC 1 cut(s) 65
BtsCI GGATG 5 cut(s) 312, 1061, 1065, 1224, 1228
BtsIMutI CAGTG 1 cut(s) 561
BveI ACCTGC 1 cut(s) 879
Cac8I GCNNGC 9 cut(s) 9, 120, 196, 200, 217, 221, 729, 1319, 1505
CfoI GCGC 4 cut(s) 25, 75, 118, 176
Cfr10I RCCGGY 1 cut(s) 1261
Cfr13I GGNCC 2 cut(s) 101, 153
ClaI ATCGAT 2 cut(s) 284, 492
CseI GACGC 4 cut(s) 13, 29, 145, 280
Csp6I GTAC 4 cut(s) 310, 1198, 1202, 1338
CviAII CATG 9 cut(s) 42, 199, 351, 441, 596, 732, 808, 991, 1318
CviQI GTAC 4 cut(s) 310, 1198, 1202, 1338
DdeI CTNAG 6 cut(s) 69, 110, 690, 903, 911, 1386
DpnI GATC 7 cut(s) 345, 556, 898, 1146, 1186, 1305, 1472
DpnII GATC 7 cut(s) 343, 554, 896, 1144, 1184, 1303, 1470
EaeI YGGCCR 2 cut(s) 243, 1567
EagI CGGCCG 1 cut(s) 243
Eam1104I CTCTTC 1 cut(s) 1122
EarI CTCTTC 1 cut(s) 1122
EclXI CGGCCG 1 cut(s) 243
Eco105I TACGTA 2 cut(s) 1201, 1313
Eco130I CCWWGG 6 cut(s) 350, 511, 875, 990, 1435, 1570
Eco147I AGGCCT 1 cut(s) 149
Eco31I GGTCTC 1 cut(s) 351
Eco47I GGWCC 2 cut(s) 101, 153
Eco47III AGCGCT 1 cut(s) 74
Eco52I CGGCCG 1 cut(s) 243
Eco81I CCTNAGG 1 cut(s) 110
EcoRII CCWGG 1 cut(s) 149
EcoT14I CCWWGG 6 cut(s) 350, 511, 875, 990, 1435, 1570
ErhI CCWWGG 6 cut(s) 350, 511, 875, 990, 1435, 1570
FaeI CATG 9 cut(s) 45, 202, 354, 444, 599, 735, 811, 994, 1321
FalI AAGNNNNNCTT 2 cut(s) 384, 416
FaqI GGGAC 1 cut(s) 114
FatI CATG 9 cut(s) 41, 198, 350, 440, 595, 731, 807, 990, 1317
FauI CCCGC 1 cut(s) 1293
FblI GTMKAC 1 cut(s) 519
Fnu4HI GCNGC 5 cut(s) 59, 163, 208, 618, 687
FokI GGATG 5 cut(s) 319, 1068, 1072, 1231, 1235
Fsp4HI GCNGC 5 cut(s) 59, 163, 208, 618, 687
FspBI CTAG 3 cut(s) 26, 461, 728
GlaI GCGC 4 cut(s) 24, 74, 117, 175
GluI GCNGC 5 cut(s) 59, 163, 208, 618, 687
GsaI CCCAGC 1 cut(s) 214
HaeII RGCGCY 2 cut(s) 76, 119
HaeIII GGCC 4 cut(s) 149, 245, 816, 1569
HapII CCGG 2 cut(s) 140, 1262
HgaI GACGC 4 cut(s) 13, 29, 145, 280
HhaI GCGC 4 cut(s) 25, 75, 118, 176
Hin1I GRCGYC 3 cut(s) 5, 137, 291
Hin1II CATG 9 cut(s) 45, 202, 354, 444, 599, 735, 811, 994, 1321
Hin6I GCGC 4 cut(s) 23, 73, 116, 174
HinP1I GCGC 4 cut(s) 23, 73, 116, 174
HindIII AAGCTT 1 cut(s) 1208
HinfI GANTC 7 cut(s) 79, 258, 281, 335, 365, 907, 1539
HpaII CCGG 2 cut(s) 140, 1262
HphI GGTGA 2 cut(s) 1276, 1457
Hpy166II GTNNAC 2 cut(s) 156, 520
Hpy188I TCNGA 6 cut(s) 229, 906, 914, 1308, 1387, 1564
Hpy188III TCNNGA 3 cut(s) 250, 418, 1148
Hpy8I GTNNAC 2 cut(s) 156, 520
Hpy99I CGWCG 4 cut(s) 23, 66, 139, 244
HpyAV CCTTC 8 cut(s) 24, 224, 297, 325, 386, 1328, 1532, 1545
HpyCH4III ACNGT 2 cut(s) 780, 1032
HpyCH4IV ACGT 4 cut(s) 36, 64, 1200, 1312
HpyCH4V TGCA 9 cut(s) 11, 45, 165, 198, 202, 452, 603, 971, 1237
HpyF3I CTNAG 6 cut(s) 69, 110, 690, 903, 911, 1386
HpySE526I ACGT 4 cut(s) 36, 64, 1200, 1312
Hsp92I GRCGYC 3 cut(s) 5, 137, 291
Hsp92II CATG 9 cut(s) 45, 202, 354, 444, 599, 735, 811, 994, 1321
HspAI GCGC 4 cut(s) 23, 73, 116, 174
Kzo9I GATC 7 cut(s) 343, 554, 896, 1144, 1184, 1303, 1470
LmnI GCTCC 1 cut(s) 829
Lsp1109I GCAGC 5 cut(s) 70, 149, 194, 604, 698
LweI GCATC 4 cut(s) 20, 612, 1129, 1391
MaeI CTAG 3 cut(s) 26, 461, 728
MaeII ACGT 4 cut(s) 36, 64, 1200, 1312
MaeIII GTNAC 5 cut(s) 292, 568, 821, 1445, 1480
MalI GATC 7 cut(s) 345, 556, 898, 1146, 1186, 1305, 1472
MboI GATC 7 cut(s) 343, 554, 896, 1144, 1184, 1303, 1470
MboII GAAGA 9 cut(s) 123, 466, 512, 790, 1102, 1117, 1139, 1160, 1475
MflI RGATCY 2 cut(s) 343, 1303
MhlI GDGCHC 2 cut(s) 221, 273
MlyI GAGTC 1 cut(s) 73
MroXI GAANNNNTTC 1 cut(s) 1157
MseI TTAA 3 cut(s) 612, 948, 1034
MspA1I CMGCKG 1 cut(s) 689
MspI CCGG 2 cut(s) 140, 1262
MspR9I CCNGG 1 cut(s) 151
MvaI CCWGG 1 cut(s) 151
MvnI CGCG 1 cut(s) 23
NcoI CCATGG 2 cut(s) 350, 990
NdeII GATC 7 cut(s) 343, 554, 896, 1144, 1184, 1303, 1470
NheI GCTAGC 1 cut(s) 727
NlaIII CATG 9 cut(s) 45, 202, 354, 444, 599, 735, 811, 994, 1321
NlaIV GGNNCC 2 cut(s) 102, 270
NmeAIII GCCGAG 1 cut(s) 1300
NmuCI GTSAC 2 cut(s) 292, 1445
NspI RCATGY 3 cut(s) 202, 444, 1321
PaeI GCATGC 2 cut(s) 202, 1321
PceI AGGCCT 1 cut(s) 149
PcsI WCGNNNNNNNCGW 1 cut(s) 892
PdmI GAANNNNTTC 1 cut(s) 1157
PfeI GAWTC 6 cut(s) 258, 281, 335, 365, 907, 1539
Pfl23II CGTACG 1 cut(s) 1197
PkrI GCNGC 5 cut(s) 60, 164, 209, 619, 688
PleI GAGTC 1 cut(s) 73
PpsI GAGTC 1 cut(s) 73
Ppu21I YACGTR 2 cut(s) 1201, 1313
Psp1406I AACGTT 1 cut(s) 36
Psp6I CCWGG 1 cut(s) 149
PspFI CCCAGC 1 cut(s) 210
PspGI CCWGG 1 cut(s) 149
PspLI CGTACG 1 cut(s) 1197
PspN4I GGNNCC 2 cut(s) 102, 270
PspPI GGNCC 2 cut(s) 101, 153
PsrI GAACNNNNNNTAC 2 cut(s) 1399, 1431
PstI CTGCAG 1 cut(s) 167
PsuI RGATCY 2 cut(s) 343, 1303
PvuII CAGCTG 1 cut(s) 689
RsaI GTAC 4 cut(s) 311, 1199, 1203, 1339
RsaNI GTAC 4 cut(s) 310, 1198, 1202, 1338
SaqAI TTAA 3 cut(s) 612, 948, 1034
SatI GCNGC 5 cut(s) 59, 163, 208, 618, 687
Sau3AI GATC 7 cut(s) 343, 554, 896, 1144, 1184, 1303, 1470
Sau96I GGNCC 2 cut(s) 101, 153
SchI GAGTC 1 cut(s) 73
ScrFI CCNGG 1 cut(s) 151
SduI GDGCHC 2 cut(s) 221, 273
SfaNI GCATC 4 cut(s) 20, 612, 1129, 1391
SfcI CTRYAG 2 cut(s) 163, 537
SinI GGWCC 2 cut(s) 101, 153
SmlI CTYRAG 1 cut(s) 1148
SmoI CTYRAG 1 cut(s) 1148
SnaBI TACGTA 2 cut(s) 1201, 1313
SphI GCATGC 2 cut(s) 202, 1321
SseBI AGGCCT 1 cut(s) 149
SsiI CCGC 3 cut(s) 56, 1172, 1286
SspI AATATT 1 cut(s) 325
SspMI CTAG 3 cut(s) 26, 461, 728
StuI AGGCCT 1 cut(s) 149
StyD4I CCNGG 1 cut(s) 149
StyI CCWWGG 6 cut(s) 350, 511, 875, 990, 1435, 1570
TaaI ACNGT 2 cut(s) 780, 1032
TaiI ACGT 4 cut(s) 39, 67, 1203, 1315
TaqI TCGA 6 cut(s) 134, 261, 284, 492, 886, 1473
TaqII GACCGA 1 cut(s) 375
TatI WGTACW 1 cut(s) 309
TfiI GAWTC 6 cut(s) 258, 281, 335, 365, 907, 1539
Tru1I TTAA 3 cut(s) 612, 948, 1034
Tru9I TTAA 3 cut(s) 612, 948, 1034
TscAI CASTG 1 cut(s) 568
TseFI GTSAC 2 cut(s) 292, 1445
TseI GCWGC 5 cut(s) 58, 162, 207, 617, 686
Tsp45I GTSAC 2 cut(s) 292, 1445
TspDTI ATGAA 7 cut(s) 30, 402, 663, 1103, 1118, 1239, 1336
TspGWI ACGGA 2 cut(s) 313, 1185
TspRI CASTG 1 cut(s) 568
VpaK11BI GGWCC 2 cut(s) 101, 153
XapI RAATTY 4 cut(s) 385, 668, 840, 888
XceI RCATGY 3 cut(s) 202, 444, 1321
XmiI GTMKAC 1 cut(s) 519
XmnI GAANNNNTTC 1 cut(s) 1157
XspI CTAG 3 cut(s) 26, 461, 728
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.