Rmu_sc0006872.1_g000005

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006872.1
OG0000119
Physical Location & Seq
Reverse (-)
33500 .. 36463
2964 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006872.1_g000005.1.cds

Sequence Viewer

Length: 1500 bp
atgtctaaacatcagggaccatacgatgagagcatcatcgaaatgagccttacgccaggtataggttatgatttcaacagtcctgaggctctattgcaacatccagtacggacacctcaacctggagaacctcaagcaagcaacaaatggaagaggccaacagttgcggaaattctttcagttatgaacccatggtggaatacgattcttgtaacttcatgtgtgattgcagttttatttgatcctttgttcttttacattccatacatcaaagaggaagaaaagtgcatgggaatcgataaacaagtgcggactgcagctctggtttttcgatcagtcacggacatcactttcctagtgcatatcatataccaactccgtgaagctatcaaatctgcagcctcaaagattccaagggataacaattcggattgggaatgggaatcggtaacccgagttcagatgattcagtttgcaaaagaattttctcgcaaattgtcatggcgctctttcctaactgacgtttttgctattttccctatgccacaagggccaataaactttccaacaaagattggttactgtttttggtggggcttgcgaaatttaagttcttttggcacaagtttggaaacaagtacctatctgtgggaaaacagctttgcaattcttatttctatcatcggcttgctattatttctatatctcattggaaatgttcagatatatatggagagggcaactaccagggtggaggaggtaagagagaagattctgataaaaaagaacgatatagaaaagtggatggaaaaaaatggtctccaagatgacatgaagaaagagatcatgaaaaacatcaagcaaaaattggaagaggacataaatgcagatctggaggatctagtctctattcttccctggtataccaagaaagctctaaagcgcgttctctgcatgagtgcgctaagaaaagtaccaatgcttagccagatggatgaaaaagttttgaaaatgatgtgcgactatctgaagcccgtgaattaccctgagaataccctggtttttcagatgggagaaccacttgatcgaatggtcttcattacagaagggtttatgtggacttacacgactcctactgagagtagtcattttggaaaagcagcaggactggctacttctccatccatggacaccaacttcctcaagaagggtgattcttatggacacgctcttctgcagtttgcatcatcatctcttgtggcactccctacctcagctgcaaatgtccggtgtcacacaaaggtagaggcgttcgttctcatggccaaggacctgaaaaacatagtaactaaatgcgaaaatttttggcctttcgactacaatgcttctaaagatgaggcggtgaatcaggtcacacccctgggccagtttcagcaacaacaaatgccaaagaagcgtgtatcaacatcgatcatcaaccccaccggctatagtggatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

499

Amino Acids

57.23

Weight (kDa)

8.0

Isoelectric Point (pI)

44.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 923
AccII CGCG 1 cut(s) 945
AciI CCGC 3 cut(s) 167, 310, 1400
AclWI GGATC 2 cut(s) 236, 906
AcoI YGGCCR 1 cut(s) 1323
AcsI RAATTY 4 cut(s) 171, 482, 604, 1360
AcuI CTGAAG 1 cut(s) 1049
AfaI GTAC 3 cut(s) 108, 640, 975
AfiI CCNNNNNNNGG 4 cut(s) 62, 122, 648, 1207
AgsI TTSAA 2 cut(s) 76, 1009
AjnI CCWGG 6 cut(s) 55, 121, 746, 917, 1056, 1419
AluBI AGCT 5 cut(s) 320, 386, 660, 935, 1277
AluI AGCT 5 cut(s) 320, 386, 660, 935, 1277
Alw26I GTCTC 2 cut(s) 824, 910
AlwI GGATC 2 cut(s) 236, 906
Ama87I CYCGRG 1 cut(s) 453
AoxI GGCC 5 cut(s) 155, 551, 1323, 1367, 1423
ApeKI GCWGC 4 cut(s) 317, 398, 1160, 1277
ApoI RAATTY 4 cut(s) 171, 482, 604, 1360
AspLEI GCGC 3 cut(s) 507, 945, 964
AspS9I GGNCC 4 cut(s) 17, 551, 1330, 1423
AsuHPI GGTGA 2 cut(s) 1223, 1414
AvaI CYCGRG 1 cut(s) 453
AvaII GGWCC 2 cut(s) 17, 1330
AxyI CCTNAGG 1 cut(s) 84
BalI TGGCCA 1 cut(s) 1325
BbsI GAAGAC 1 cut(s) 1087
BbvCI CCTCAGC 1 cut(s) 1273
BbvI GCAGC 4 cut(s) 329, 410, 1172, 1264
BccI CCATC 4 cut(s) 799, 985, 1063, 1189
BcgI CGANNNNNNTGC 4 cut(s) 277, 311, 1364, 1398
BciT130I CCWGG 6 cut(s) 57, 123, 748, 919, 1058, 1421
BcoDI GTCTC 2 cut(s) 824, 910
BfaI CTAG 2 cut(s) 356, 902
BfmI CTRYAG 4 cut(s) 315, 396, 1235, 1489
BfoI RGCGCY 1 cut(s) 508
BglI GCCNNNNNGGC 1 cut(s) 550
BglII AGATCT 1 cut(s) 889
BisI GCNGC 4 cut(s) 318, 399, 1161, 1278
BlpI GCTNAGC 1 cut(s) 983
BlsI GCNGC 4 cut(s) 319, 400, 1162, 1279
Bme1390I CCNGG 6 cut(s) 57, 123, 748, 919, 1058, 1421
Bme18I GGWCC 2 cut(s) 17, 1330
BmeT110I CYCGRG 1 cut(s) 453
BmgT120I GGNCC 4 cut(s) 17, 551, 1330, 1423
BmiI GGNNCC 1 cut(s) 18
BmrFI CCNGG 6 cut(s) 57, 123, 748, 919, 1058, 1421
BmsI GCATC 2 cut(s) 42, 1253
BpiI GAAGAC 1 cut(s) 1087
BpmI CTGGAG 2 cut(s) 144, 914
Bpu10I CCTNAGC 1 cut(s) 1273
Bpu1102I GCTNAGC 1 cut(s) 983
BpuEI CTTGAG 2 cut(s) 117, 1187
Bsa29I ATCGAT 2 cut(s) 297, 1469
BsaI GGTCTC 1 cut(s) 824
BsaJI CCNNGG 9 cut(s) 191, 413, 747, 917, 1056, 1185, 1326, 1419, 1420
BsaWI WCCGGW 1 cut(s) 1287
Bsc4I CCNNNNNNNGG 4 cut(s) 62, 122, 648, 1207
Bse118I RCCGGY 1 cut(s) 1484
Bse1I ACTGG 3 cut(s) 104, 1173, 1426
Bse21I CCTNAGG 1 cut(s) 84
BseBI CCWGG 6 cut(s) 57, 123, 748, 919, 1058, 1421
BseCI ATCGAT 2 cut(s) 297, 1469
BseDI CCNNGG 9 cut(s) 191, 413, 747, 917, 1056, 1185, 1326, 1419, 1420
BseGI GGATG 4 cut(s) 100, 810, 1000, 1181
BseLI CCNNNNNNNGG 4 cut(s) 62, 122, 648, 1207
BseMII CTCAG 4 cut(s) 75, 1038, 1128, 1287
BseNI ACTGG 3 cut(s) 104, 1173, 1426
BseRI GAGGAG 1 cut(s) 770
BseXI GCAGC 4 cut(s) 329, 410, 1172, 1264
Bsh1236I CGCG 1 cut(s) 945
BshFI GGCC 5 cut(s) 157, 553, 1325, 1369, 1425
BshVI ATCGAT 2 cut(s) 297, 1469
BsiHKCI CYCGRG 1 cut(s) 453
BsiSI CCGG 2 cut(s) 1288, 1485
BslFI GGGAC 1 cut(s) 30
BslI CCNNNNNNNGG 4 cut(s) 62, 122, 648, 1207
BsmAI GTCTC 2 cut(s) 824, 910
BsmFI GGGAC 1 cut(s) 30
BsnI GGCC 5 cut(s) 157, 553, 1325, 1369, 1425
Bso31I GGTCTC 1 cut(s) 824
BsoBI CYCGRG 1 cut(s) 453
Bsp143I GATC 7 cut(s) 241, 332, 843, 889, 898, 1084, 1470
Bsp1720I GCTNAGC 1 cut(s) 983
Bsp19I CCATGG 2 cut(s) 191, 1185
BspACI CCGC 3 cut(s) 167, 310, 1400
BspANI GGCC 5 cut(s) 157, 553, 1325, 1369, 1425
BspCNI CTCAG 4 cut(s) 76, 1039, 1129, 1286
BspDI ATCGAT 2 cut(s) 297, 1469
BspFNI CGCG 1 cut(s) 945
BspHI TCATGA 1 cut(s) 846
BspLI GGNNCC 1 cut(s) 18
BspMAI CTGCAG 3 cut(s) 319, 400, 1239
BspPI GGATC 2 cut(s) 236, 906
BspQI GCTCTTC 1 cut(s) 1236
BspTNI GGTCTC 1 cut(s) 824
BsrFI RCCGGY 1 cut(s) 1484
BsrI ACTGG 3 cut(s) 104, 1173, 1426
BssAI RCCGGY 1 cut(s) 1484
BssECI CCNNGG 9 cut(s) 191, 413, 747, 917, 1056, 1185, 1326, 1419, 1420
BssMI GATC 7 cut(s) 241, 332, 843, 889, 898, 1084, 1470
BssNAI GTATAC 1 cut(s) 924
BssT1I CCWWGG 4 cut(s) 191, 413, 1185, 1326
Bst1107I GTATAC 1 cut(s) 924
Bst2UI CCWGG 6 cut(s) 57, 123, 748, 919, 1058, 1421
Bst4CI ACNGT 3 cut(s) 80, 163, 584
Bst6I CTCTTC 3 cut(s) 146, 867, 1236
BstC8I GCNNGC 3 cut(s) 139, 599, 689
BstDEI CTNAG 6 cut(s) 84, 965, 983, 1047, 1137, 1273
BstDSI CCRYGG 2 cut(s) 191, 1185
BstEII GGTNACC 1 cut(s) 448
BstENI CCTNNNNNAGG 1 cut(s) 1205
BstF5I GGATG 4 cut(s) 100, 810, 1000, 1181
BstFNI CGCG 1 cut(s) 945
BstH2I RGCGCY 1 cut(s) 508
BstHHI GCGC 3 cut(s) 507, 945, 964
BstKTI GATC 7 cut(s) 244, 335, 846, 892, 901, 1087, 1473
BstMAI GTCTC 2 cut(s) 824, 910
BstMBI GATC 7 cut(s) 241, 332, 843, 889, 898, 1084, 1470
BstMWI GCNNNNNNNGC 4 cut(s) 550, 951, 1169, 1453
BstNI CCWGG 6 cut(s) 57, 123, 748, 919, 1058, 1421
BstPI GGTNACC 1 cut(s) 448
BstSCI CCNGG 6 cut(s) 55, 121, 746, 917, 1056, 1419
BstSFI CTRYAG 4 cut(s) 315, 396, 1235, 1489
BstUI CGCG 1 cut(s) 945
BstV1I GCAGC 4 cut(s) 329, 410, 1172, 1264
BstV2I GAAGAC 1 cut(s) 1087
BstX2I RGATCY 2 cut(s) 889, 898
BstYI RGATCY 2 cut(s) 889, 898
BstZ17I GTATAC 1 cut(s) 924
Bsu15I ATCGAT 2 cut(s) 297, 1469
Bsu36I CCTNAGG 1 cut(s) 84
BsuRI GGCC 5 cut(s) 157, 553, 1325, 1369, 1425
BsuTUI ATCGAT 2 cut(s) 297, 1469
BtgI CCRYGG 2 cut(s) 191, 1185
BtsCI GGATG 4 cut(s) 100, 810, 1000, 1181
Cac8I GCNNGC 3 cut(s) 139, 599, 689
CciI TCATGA 1 cut(s) 846
CfoI GCGC 3 cut(s) 507, 945, 964
Cfr10I RCCGGY 1 cut(s) 1484
Cfr13I GGNCC 4 cut(s) 17, 551, 1330, 1423
ClaI ATCGAT 2 cut(s) 297, 1469
Csp6I GTAC 3 cut(s) 107, 639, 974
CviAII CATG 9 cut(s) 192, 219, 289, 501, 832, 847, 955, 1186, 1321
CviQI GTAC 3 cut(s) 107, 639, 974
DdeI CTNAG 6 cut(s) 84, 965, 983, 1047, 1137, 1273
DpnI GATC 7 cut(s) 243, 334, 845, 891, 900, 1086, 1472
DpnII GATC 7 cut(s) 241, 332, 843, 889, 898, 1084, 1470
EaeI YGGCCR 1 cut(s) 1323
Eam1104I CTCTTC 3 cut(s) 146, 867, 1236
EarI CTCTTC 3 cut(s) 146, 867, 1236
Eco130I CCWWGG 4 cut(s) 191, 413, 1185, 1326
Eco31I GGTCTC 1 cut(s) 824
Eco47I GGWCC 2 cut(s) 17, 1330
Eco57I CTGAAG 1 cut(s) 1049
Eco81I CCTNAGG 1 cut(s) 84
Eco88I CYCGRG 1 cut(s) 453
Eco91I GGTNACC 1 cut(s) 448
EcoNI CCTNNNNNAGG 1 cut(s) 1205
EcoO109I RGGNCCY 1 cut(s) 1330
EcoO65I GGTNACC 1 cut(s) 448
EcoRII CCWGG 6 cut(s) 55, 121, 746, 917, 1056, 1419
EcoT14I CCWWGG 4 cut(s) 191, 413, 1185, 1326
ErhI CCWWGG 4 cut(s) 191, 413, 1185, 1326
FaeI CATG 9 cut(s) 195, 222, 292, 504, 835, 850, 958, 1189, 1324
FaqI GGGAC 1 cut(s) 30
FatI CATG 9 cut(s) 191, 218, 288, 500, 831, 846, 954, 1185, 1320
FblI GTMKAC 1 cut(s) 923
Fnu4HI GCNGC 4 cut(s) 318, 399, 1161, 1278
FokI GGATG 4 cut(s) 87, 817, 1007, 1168
Fsp4HI GCNGC 4 cut(s) 318, 399, 1161, 1278
FspBI CTAG 2 cut(s) 356, 902
GlaI GCGC 3 cut(s) 506, 944, 963
GluI GCNGC 4 cut(s) 318, 399, 1161, 1278
GsuI CTGGAG 2 cut(s) 144, 914
HaeII RGCGCY 1 cut(s) 508
HaeIII GGCC 5 cut(s) 157, 553, 1325, 1369, 1425
HapII CCGG 2 cut(s) 1288, 1485
HhaI GCGC 3 cut(s) 507, 945, 964
Hin1II CATG 9 cut(s) 195, 222, 292, 504, 835, 850, 958, 1189, 1324
Hin6I GCGC 3 cut(s) 505, 943, 962
HinP1I GCGC 3 cut(s) 505, 943, 962
HinfI GANTC 9 cut(s) 205, 294, 409, 443, 466, 772, 1129, 1214, 1405
HpaII CCGG 2 cut(s) 1288, 1485
HphI GGTGA 2 cut(s) 1223, 1414
Hpy166II GTNNAC 2 cut(s) 924, 1119
Hpy188I TCNGA 6 cut(s) 430, 462, 723, 777, 1029, 1068
Hpy188III TCNNGA 4 cut(s) 83, 847, 893, 1204
Hpy8I GTNNAC 2 cut(s) 924, 1119
HpyAV CCTTC 2 cut(s) 1100, 1201
HpyCH4III ACNGT 3 cut(s) 80, 163, 584
HpyCH4IV ACGT 1 cut(s) 522
HpyF10VI GCNNNNNNNGC 4 cut(s) 550, 951, 1169, 1453
HpyF3I CTNAG 6 cut(s) 84, 965, 983, 1047, 1137, 1273
HpySE526I ACGT 1 cut(s) 522
Hsp92II CATG 9 cut(s) 195, 222, 292, 504, 835, 850, 958, 1189, 1324
HspAI GCGC 3 cut(s) 505, 943, 962
Kzo9I GATC 7 cut(s) 241, 332, 843, 889, 898, 1084, 1470
LguI GCTCTTC 1 cut(s) 1236
Lsp1109I GCAGC 4 cut(s) 329, 410, 1172, 1264
LweI GCATC 2 cut(s) 42, 1253
MaeI CTAG 2 cut(s) 356, 902
MaeII ACGT 1 cut(s) 522
MaeIII GTNAC 7 cut(s) 211, 337, 448, 578, 1292, 1345, 1411
MalI GATC 7 cut(s) 243, 334, 845, 891, 900, 1086, 1472
MboI GATC 7 cut(s) 241, 332, 843, 889, 898, 1084, 1470
MboII GAAGA 8 cut(s) 163, 290, 781, 847, 884, 905, 1087, 1223
MflI RGATCY 2 cut(s) 889, 898
MlsI TGGCCA 1 cut(s) 1325
MluCI AATT 9 cut(s) 171, 424, 482, 494, 604, 666, 866, 1039, 1360
MluNI TGGCCA 1 cut(s) 1325
MlyI GAGTC 1 cut(s) 1123
MmeI TCCRAC 1 cut(s) 590
Mox20I TGGCCA 1 cut(s) 1325
MscI TGGCCA 1 cut(s) 1325
MseI TTAA 1 cut(s) 608
MslI CAYNNNNRTG 1 cut(s) 41
Msp20I TGGCCA 1 cut(s) 1325
MspA1I CMGCKG 1 cut(s) 1277
MspI CCGG 2 cut(s) 1288, 1485
MspR9I CCNGG 6 cut(s) 57, 123, 748, 919, 1058, 1421
MvaI CCWGG 6 cut(s) 57, 123, 748, 919, 1058, 1421
MvnI CGCG 1 cut(s) 945
MwoI GCNNNNNNNGC 4 cut(s) 550, 951, 1169, 1453
NcoI CCATGG 2 cut(s) 191, 1185
NdeII GATC 7 cut(s) 241, 332, 843, 889, 898, 1084, 1470
NlaIII CATG 9 cut(s) 195, 222, 292, 504, 835, 850, 958, 1189, 1324
NlaIV GGNNCC 1 cut(s) 18
NmuCI GTSAC 3 cut(s) 337, 1292, 1411
PagI TCATGA 1 cut(s) 846
PasI CCCWGGG 1 cut(s) 1420
PciSI GCTCTTC 1 cut(s) 1236
PfeI GAWTC 8 cut(s) 205, 294, 409, 443, 466, 772, 1214, 1405
PkrI GCNGC 4 cut(s) 319, 400, 1162, 1279
PleI GAGTC 1 cut(s) 1123
PpsI GAGTC 1 cut(s) 1123
PpuMI RGGWCCY 1 cut(s) 1330
Psp5II RGGWCCY 1 cut(s) 1330
Psp6I CCWGG 6 cut(s) 55, 121, 746, 917, 1056, 1419
PspEI GGTNACC 1 cut(s) 448
PspGI CCWGG 6 cut(s) 55, 121, 746, 917, 1056, 1419
PspN4I GGNNCC 1 cut(s) 18
PspPI GGNCC 4 cut(s) 17, 551, 1330, 1423
PspPPI RGGWCCY 1 cut(s) 1330
PsrI GAACNNNNNNTAC 2 cut(s) 441, 473
PstI CTGCAG 3 cut(s) 319, 400, 1239
PsuI RGATCY 2 cut(s) 889, 898
PvuII CAGCTG 1 cut(s) 1277
RsaI GTAC 3 cut(s) 108, 640, 975
RsaNI GTAC 3 cut(s) 107, 639, 974
RseI CAYNNNNRTG 1 cut(s) 41
SapI GCTCTTC 1 cut(s) 1236
SaqAI TTAA 1 cut(s) 608
SatI GCNGC 4 cut(s) 318, 399, 1161, 1278
Sau3AI GATC 7 cut(s) 241, 332, 843, 889, 898, 1084, 1470
Sau96I GGNCC 4 cut(s) 17, 551, 1330, 1423
SchI GAGTC 1 cut(s) 1123
ScrFI CCNGG 6 cut(s) 57, 123, 748, 919, 1058, 1421
SfaNI GCATC 2 cut(s) 42, 1253
SfcI CTRYAG 4 cut(s) 315, 396, 1235, 1489
SinI GGWCC 2 cut(s) 17, 1330
SmiMI CAYNNNNRTG 1 cut(s) 41
SmlI CTYRAG 2 cut(s) 132, 1202
SmoI CTYRAG 2 cut(s) 132, 1202
Sse9I AATT 9 cut(s) 171, 424, 482, 494, 604, 666, 866, 1039, 1360
SsiI CCGC 3 cut(s) 167, 310, 1400
SspMI CTAG 2 cut(s) 356, 902
StyD4I CCNGG 6 cut(s) 55, 121, 746, 917, 1056, 1419
StyI CCWWGG 4 cut(s) 191, 413, 1185, 1326
TaaI ACNGT 3 cut(s) 80, 163, 584
TaiI ACGT 1 cut(s) 525
TaqI TCGA 6 cut(s) 39, 297, 331, 1087, 1374, 1469
TasI AATT 9 cut(s) 171, 424, 482, 494, 604, 666, 866, 1039, 1360
TfiI GAWTC 8 cut(s) 205, 294, 409, 443, 466, 772, 1214, 1405
Tru1I TTAA 1 cut(s) 608
Tru9I TTAA 1 cut(s) 608
TseFI GTSAC 3 cut(s) 337, 1292, 1411
TseI GCWGC 4 cut(s) 317, 398, 1160, 1277
Tsp45I GTSAC 3 cut(s) 337, 1292, 1411
TspDTI ATGAA 6 cut(s) 200, 207, 848, 863, 1011, 1087
TspGWI ACGGA 3 cut(s) 124, 356, 368
VpaK11BI GGWCC 2 cut(s) 17, 1330
XagI CCTNNNNNAGG 1 cut(s) 1205
XapI RAATTY 4 cut(s) 171, 482, 604, 1360
XmiI GTMKAC 1 cut(s) 923
XspI CTAG 2 cut(s) 356, 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.