RchiOBHm_Chr1g0381131

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000119
Physical Location & Seq
Reverse (-)
66494433 .. 66497190
2758 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60433

Sequence Viewer

Length: 1863 bp
ATGATTAACTCGATGGATGAAGCCCCAGAAGTAAGTCTCACAGGTTACACTACTCATTATGGATATGGTCGGAAACCATCAGAAATGAAAAAAACGAAAAGGAGATTTAGTTCGTGGTGGACTAGCTTTTCGGTTCGAGGTTCATGGTGGGATTCGATATTTGTAGCCTCGTGTGTTATCGCAGTCTCACTGGATCCATTGTTCTTTTACATTCCTATCATCGATAGGGAAAAGAAGTGCCTTGAAGCAGACATAAAACTGAGGAACGTAACTCTTCTTTTGCGATCACTCATGGATATCACTTTTATAGTGCATATTATCTATCAAATTCGTGAAGCTATGATTGCTGCAGCCTCGGATAAGATGGCTACCCAGGAAGAATCGAAATTTTTATGTTTCTTTGAATATGTTGATGCAATAGTTGACAATTTGTCACTGCGCTCTCTCATAACTGACATTCTAGCTGTTCTTCCTATCCCACAGGTGCTACTACTTGTTGTCTTCTTCAAAATGAGAGGCTCTGGATATTTGGACCACAGGAAGATTTTGAACTTCTTTCTTCTCGCTCAATATTTGGCAAGAATTTATCGTATGCACCTATCTTCGAAAAAACTTACAAAGAGTCATGGAATATGGATTAAAGGACTATTCAATTTCTTTCTCTATATCTTTGCAAGTCACGTACTTGGAGCCTTTTGGTATTTCTTTTCGATTCAACGAGAGACATCATGTTGGCATCGAAGTTGTGGTCACAACTGTACAAGTACCTTTTATTGTGATGAGTACAAACATTCAGACGATATGGTGACACTTATAACATCTCTGAATGCATCGTGCCCTATCAATGCTACTGGACCATTTGATTTTGGAATATTTCTTGATTCTCTGATGTCTAATAACACGGCATCAACCAACTTTCCACAAAAGTTGTGTTACTCTTTCTGGTGGGGTCTACGAAATTTGAGTAATTTTGGCACGAATCTTGTAACAAGTAACTATGTATGGGAGAATTTATTCGCAATTCTTATTTCTATCATTGGCTTGTTACTGTTTTTGTACCTCATCGGAAATGTGCAGACATTTATGTCTATGGAAACTGAGAAGTCAGAGGAGATAAGAAGGAAGATCAAATCAAAAGAGCAAGATATGAAAGTGTGGATGGAGAAAAACTGCCTCCCTGCTAATTTGAGGAAAGAAATCATGGCAAATATAAGAGAAAAATTAGAACAAGACAAGCATGCTGACATGGAGAATCTGTTCTCCATTCTTCCCTGGTCAACCAAAAAATCTCTAAAGCGTGTTCTCTGCATGAGTACTCTGAGAAAAGTACCAATGCTTGAAGGTATGAATCCAAAAGTTTTGAAAATGATATGTGACTATCTGAAGCCTGTGATATACCCTGAGCATAGCTATGTTGCCAAGGTGGATGAACCAGTTGATCGGATGGTGCTTGTCACCGAAGGAACTATGTGGATCTACTCGTCGAATACTAGTACTCCATCTAAGATCCACAGGACGGTTGAGAACGGTGACATTTATGGAGATGAACAACTTCTGAGTTGGGCGTCGAAGGACATGCAACACGTCTCGTTTGCAACCCTCCCGATCTCAAAAGAAAATGTGAAATGTCATACAAGAGTGGAAGGGTTTGCTATCACGGCCAAGGACTTGAAAGCAGTCGCCACCAAGTGCAAAATGTATTGGAATTACGATGATCCTCGAGAGAAGGAGAGGGTGGCGAGCTCTACCATAGGAACGTCATTCCGTCGAAACCGCAATAACCCAAATAGGCCGGCTACCGTAGGAGTAGGAGCTGCGACCTCGCCAAGAACACGAATTGAGTATCTGCAGAAGAGAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

620

Amino Acids

71.67

Weight (kDa)

9.12

Isoelectric Point (pI)

39.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 48 - 369 6.3e-09 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 815
AasI GACNNNNNNGTC 1 cut(s) 1084
AccI GTMKAC 1 cut(s) 952
AciI CCGC 1 cut(s) 1774
AclWI GGATC 5 cut(s) 188, 201, 1481, 1501, 1709
AcoI YGGCCR 1 cut(s) 1659
AcsI RAATTY 5 cut(s) 327, 386, 582, 958, 1009
AcuI CTGAAG 1 cut(s) 1403
AcyI GRCGYC 1 cut(s) 1565
AdeI CACNNNGTG 1 cut(s) 1689
AfaI GTAC 8 cut(s) 684, 760, 766, 785, 1058, 1315, 1329, 1495
AfiI CCNNNNNNNGG 1 cut(s) 1516
AflIII ACRYGT 1 cut(s) 1582
AgsI TTSAA 9 cut(s) 245, 404, 508, 550, 652, 716, 1340, 1363, 1672
AhdI GACNNNNNGTC 1 cut(s) 430
AhlI ACTAGT 1 cut(s) 1490
AjiI CACGTC 1 cut(s) 1585
AjnI CCWGG 2 cut(s) 372, 1271
AloI GAACNNNNNNTCC 6 cut(s) 94, 126, 185, 217, 1241, 1273
AluBI AGCT 6 cut(s) 126, 338, 464, 1410, 1743, 1814
AluI AGCT 6 cut(s) 126, 338, 464, 1410, 1743, 1814
Alw21I GWGCWC 1 cut(s) 1745
Alw26I GTCTC 4 cut(s) 41, 190, 716, 1591
AlwI GGATC 5 cut(s) 188, 201, 1481, 1501, 1709
Ama87I CYCGRG 1 cut(s) 1719
AoxI GGCC 2 cut(s) 1659, 1790
ApeKI GCWGC 3 cut(s) 347, 350, 1814
ApoI RAATTY 5 cut(s) 327, 386, 582, 958, 1009
ArsI GACNNNNNNTTYG 4 cut(s) 112, 144, 733, 765
Asp700I GAANNNNTTC 3 cut(s) 1013, 1256, 1551
AspLEI GCGC 1 cut(s) 441
AspS9I GGNCC 2 cut(s) 532, 854
AsuHPI GGTGA 3 cut(s) 817, 1447, 1541
AsuII TTCGAA 1 cut(s) 605
AvaI CYCGRG 1 cut(s) 1719
AvaII GGWCC 2 cut(s) 532, 854
BaeGI GKGCMC 1 cut(s) 839
BamHI GGATCC 1 cut(s) 193
BanII GRGCYC 1 cut(s) 1745
BauI CACGAG 1 cut(s) 169
BbsI GAAGAC 1 cut(s) 493
Bbv12I GWGCWC 1 cut(s) 1745
BbvI GCAGC 3 cut(s) 334, 362, 1801
BccI CCATC 6 cut(s) 7, 85, 358, 1153, 1438, 1507
BceAI ACGGC 2 cut(s) 918, 1674
BcgI CGANNNNNNTGC 2 cut(s) 1558, 1592
BciT130I CCWGG 2 cut(s) 374, 1273
BcoDI GTCTC 4 cut(s) 41, 190, 716, 1591
BcuI ACTAGT 1 cut(s) 1490
BfaI CTAG 3 cut(s) 123, 461, 1491
BfmI CTRYAG 2 cut(s) 348, 1847
BisI GCNGC 3 cut(s) 348, 351, 1815
BlsI GCNGC 3 cut(s) 349, 352, 1816
BmcAI AGTACT 2 cut(s) 1315, 1495
Bme1390I CCNGG 2 cut(s) 374, 1273
Bme18I GGWCC 2 cut(s) 532, 854
BmeRI GACNNNNNGTC 1 cut(s) 430
BmeT110I CYCGRG 1 cut(s) 1719
BmgBI CACGTC 1 cut(s) 1585
BmgT120I GGNCC 2 cut(s) 532, 854
BmiI GGNNCC 2 cut(s) 195, 691
BmrFI CCNGG 2 cut(s) 374, 1273
BmsI GCATC 4 cut(s) 403, 745, 839, 914
BpiI GAAGAC 1 cut(s) 493
Bpu10I CCTNAGC 1 cut(s) 1401
Bpu14I TTCGAA 1 cut(s) 605
Bsa29I ATCGAT 1 cut(s) 222
BsaAI YACGTR 1 cut(s) 682
BsaHI GRCGYC 1 cut(s) 1565
BsaJI CCNNGG 5 cut(s) 354, 372, 1271, 1419, 1662
BsaXI ACNNNNNCTCC 6 cut(s) 94, 124, 1241, 1271, 1480, 1510
Bsc4I CCNNNNNNNGG 1 cut(s) 1516
Bse118I RCCGGY 1 cut(s) 1792
Bse1I ACTGG 3 cut(s) 195, 856, 1433
BseBI CCWGG 2 cut(s) 374, 1273
BseCI ATCGAT 1 cut(s) 222
BseDI CCNNGG 5 cut(s) 354, 372, 1271, 1419, 1662
BseGI GGATG 4 cut(s) 22, 1164, 1432, 1449
BseLI CCNNNNNNNGG 1 cut(s) 1516
BseMII CTCAG 5 cut(s) 251, 1089, 1310, 1392, 1547
BseNI ACTGG 3 cut(s) 195, 856, 1433
BseRI GAGGAG 1 cut(s) 1124
BseSI GKGCMC 1 cut(s) 839
BseXI GCAGC 3 cut(s) 334, 362, 1801
BsgI GTGCAG 1 cut(s) 1094
BshFI GGCC 2 cut(s) 1661, 1792
BshVI ATCGAT 1 cut(s) 222
BsiHKAI GWGCWC 1 cut(s) 1745
BsiHKCI CYCGRG 1 cut(s) 1719
BsiSI CCGG 1 cut(s) 1793
BslI CCNNNNNNNGG 1 cut(s) 1516
BsmAI GTCTC 4 cut(s) 41, 190, 716, 1591
BsmBI CGTCTC 1 cut(s) 1591
BsmI GAATGC 1 cut(s) 832
BsnI GGCC 2 cut(s) 1661, 1792
BsoBI CYCGRG 1 cut(s) 1719
Bsp119I TTCGAA 1 cut(s) 605
Bsp1286I GDGCHC 2 cut(s) 839, 1745
Bsp1407I TGTACA 1 cut(s) 758
Bsp143I GATC 8 cut(s) 193, 284, 1125, 1438, 1473, 1506, 1605, 1714
BspACI CCGC 1 cut(s) 1774
BspANI GGCC 2 cut(s) 1661, 1792
BspCNI CTCAG 5 cut(s) 252, 1090, 1311, 1393, 1548
BspDI ATCGAT 1 cut(s) 222
BspLI GGNNCC 2 cut(s) 195, 691
BspMAI CTGCAG 2 cut(s) 352, 1851
BspPI GGATC 5 cut(s) 188, 201, 1481, 1501, 1709
BspT104I TTCGAA 1 cut(s) 605
BsrFI RCCGGY 1 cut(s) 1792
BsrGI TGTACA 1 cut(s) 758
BsrI ACTGG 3 cut(s) 195, 856, 1433
BssAI RCCGGY 1 cut(s) 1792
BssECI CCNNGG 5 cut(s) 354, 372, 1271, 1419, 1662
BssMI GATC 8 cut(s) 193, 284, 1125, 1438, 1473, 1506, 1605, 1714
BssNI GRCGYC 1 cut(s) 1565
BssSI CACGAG 1 cut(s) 169
BssT1I CCWWGG 2 cut(s) 1419, 1662
Bst2BI CACGAG 1 cut(s) 169
Bst2UI CCWGG 2 cut(s) 374, 1273
Bst4CI ACNGT 5 cut(s) 758, 1050, 1519, 1529, 1801
Bst6I CTCTTC 2 cut(s) 279, 1847
BstACI GRCGYC 1 cut(s) 1565
BstAUI TGTACA 1 cut(s) 758
BstBAI YACGTR 1 cut(s) 682
BstBI TTCGAA 1 cut(s) 605
BstC8I GCNNGC 3 cut(s) 1239, 1741, 1794
BstDEI CTNAG 6 cut(s) 260, 1098, 1319, 1401, 1503, 1556
BstF5I GGATG 4 cut(s) 22, 1164, 1432, 1449
BstHHI GCGC 1 cut(s) 441
BstKTI GATC 8 cut(s) 196, 287, 1128, 1441, 1476, 1509, 1608, 1717
BstMAI GTCTC 4 cut(s) 41, 190, 716, 1591
BstMBI GATC 8 cut(s) 193, 284, 1125, 1438, 1473, 1506, 1605, 1714
BstMWI GCNNNNNNNGC 2 cut(s) 344, 1658
BstNI CCWGG 2 cut(s) 374, 1273
BstNSI RCATGY 2 cut(s) 1241, 1579
BstSCI CCNGG 2 cut(s) 372, 1271
BstSFI CTRYAG 2 cut(s) 348, 1847
BstSLI GKGCMC 1 cut(s) 839
BstV1I GCAGC 3 cut(s) 334, 362, 1801
BstV2I GAAGAC 1 cut(s) 493
BstX2I RGATCY 3 cut(s) 193, 1473, 1506
BstYI RGATCY 3 cut(s) 193, 1473, 1506
Bsu15I ATCGAT 1 cut(s) 222
BsuRI GGCC 2 cut(s) 1661, 1792
BsuTUI ATCGAT 1 cut(s) 222
BtrI CACGTC 1 cut(s) 1585
BtsCI GGATG 4 cut(s) 22, 1164, 1432, 1449
BtsI GCAGTG 1 cut(s) 434
BtsIMutI CAGTG 2 cut(s) 188, 434
Cac8I GCNNGC 3 cut(s) 1239, 1741, 1794
CfoI GCGC 1 cut(s) 441
Cfr10I RCCGGY 1 cut(s) 1792
Cfr13I GGNCC 2 cut(s) 532, 854
ClaI ATCGAT 1 cut(s) 222
CseI GACGC 1 cut(s) 1554
Csp6I GTAC 8 cut(s) 683, 759, 765, 784, 1057, 1314, 1328, 1494
CspCI CAANNNNNGTGG 2 cut(s) 909, 944
CviAII CATG 9 cut(s) 144, 292, 626, 729, 1201, 1238, 1246, 1309, 1576
CviQI GTAC 8 cut(s) 683, 759, 765, 784, 1057, 1314, 1328, 1494
DdeI CTNAG 6 cut(s) 260, 1098, 1319, 1401, 1503, 1556
DpnI GATC 8 cut(s) 195, 286, 1127, 1440, 1475, 1508, 1607, 1716
DpnII GATC 8 cut(s) 193, 284, 1125, 1438, 1473, 1506, 1605, 1714
DraIII CACNNNGTG 1 cut(s) 1689
DrdI GACNNNNNNGTC 1 cut(s) 1084
DriI GACNNNNNGTC 1 cut(s) 430
DseDI GACNNNNNNGTC 1 cut(s) 1084
EaeI YGGCCR 1 cut(s) 1659
Eam1104I CTCTTC 2 cut(s) 279, 1847
Eam1105I GACNNNNNGTC 1 cut(s) 430
EarI CTCTTC 2 cut(s) 279, 1847
Ecl136II GAGCTC 1 cut(s) 1743
Eco130I CCWWGG 2 cut(s) 1419, 1662
Eco24I GRGCYC 1 cut(s) 1745
Eco32I GATATC 1 cut(s) 298
Eco47I GGWCC 2 cut(s) 532, 854
Eco53kI GAGCTC 1 cut(s) 1743
Eco57I CTGAAG 1 cut(s) 1403
Eco88I CYCGRG 1 cut(s) 1719
EcoICRI GAGCTC 1 cut(s) 1743
EcoRII CCWGG 2 cut(s) 372, 1271
EcoRV GATATC 1 cut(s) 298
EcoT14I CCWWGG 2 cut(s) 1419, 1662
EcoT22I ATGCAT 1 cut(s) 832
EcoT38I GRGCYC 1 cut(s) 1745
ErhI CCWWGG 2 cut(s) 1419, 1662
Esp3I CGTCTC 1 cut(s) 1591
FaeI CATG 9 cut(s) 147, 295, 629, 732, 1204, 1241, 1249, 1312, 1579
FatI CATG 9 cut(s) 143, 291, 625, 728, 1200, 1237, 1245, 1308, 1575
FblI GTMKAC 1 cut(s) 952
Fnu4HI GCNGC 3 cut(s) 348, 351, 1815
FokI GGATG 4 cut(s) 29, 1171, 1439, 1456
FriOI GRGCYC 1 cut(s) 1745
Fsp4HI GCNGC 3 cut(s) 348, 351, 1815
FspBI CTAG 3 cut(s) 123, 461, 1491
GlaI GCGC 1 cut(s) 440
GluI GCNGC 3 cut(s) 348, 351, 1815
HaeIII GGCC 2 cut(s) 1661, 1792
HapII CCGG 1 cut(s) 1793
HgaI GACGC 1 cut(s) 1554
HhaI GCGC 1 cut(s) 441
Hin1I GRCGYC 1 cut(s) 1565
Hin1II CATG 9 cut(s) 147, 295, 629, 732, 1204, 1241, 1249, 1312, 1579
Hin6I GCGC 1 cut(s) 439
HinP1I GCGC 1 cut(s) 439
HincII GTYRAC 2 cut(s) 424, 1278
HindII GTYRAC 2 cut(s) 424, 1278
HinfI GANTC 8 cut(s) 152, 380, 622, 712, 881, 979, 1252, 1348
HpaII CCGG 1 cut(s) 1793
HphI GGTGA 3 cut(s) 817, 1447, 1541
Hpy166II GTNNAC 4 cut(s) 120, 424, 953, 1278
Hpy188III TCNNGA 5 cut(s) 332, 522, 878, 1603, 1721
Hpy8I GTNNAC 4 cut(s) 120, 424, 953, 1278
Hpy99I CGWCG 3 cut(s) 1486, 1570, 1770
HpyAV CCTTC 6 cut(s) 1113, 1334, 1454, 1564, 1637, 1720
HpyCH4III ACNGT 5 cut(s) 758, 1050, 1519, 1529, 1801
HpyCH4IV ACGT 4 cut(s) 267, 681, 1584, 1757
HpyF10VI GCNNNNNNNGC 2 cut(s) 344, 1658
HpyF3I CTNAG 6 cut(s) 260, 1098, 1319, 1401, 1503, 1556
HpySE526I ACGT 4 cut(s) 267, 681, 1584, 1757
Hsp92I GRCGYC 1 cut(s) 1565
Hsp92II CATG 9 cut(s) 147, 295, 629, 732, 1204, 1241, 1249, 1312, 1579
HspAI GCGC 1 cut(s) 439
KroI GCCGGC 1 cut(s) 1792
KroNI GCCGGC 1 cut(s) 1794
Kzo9I GATC 8 cut(s) 193, 284, 1125, 1438, 1473, 1506, 1605, 1714
LmnI GCTCC 2 cut(s) 689, 1811
Lsp1109I GCAGC 3 cut(s) 334, 362, 1801
LweI GCATC 4 cut(s) 403, 745, 839, 914
MaeI CTAG 3 cut(s) 123, 461, 1491
MaeII ACGT 4 cut(s) 267, 681, 1584, 1757
MalI GATC 8 cut(s) 195, 286, 1127, 1440, 1475, 1508, 1607, 1716
MboI GATC 8 cut(s) 193, 284, 1125, 1438, 1473, 1506, 1605, 1714
MflI RGATCY 3 cut(s) 193, 1473, 1506
MhlI GDGCHC 2 cut(s) 839, 1745
MlyI GAGTC 1 cut(s) 631
MmeI TCCRAC 1 cut(s) 50
Mph1103I ATGCAT 1 cut(s) 832
MroNI GCCGGC 1 cut(s) 1792
MroXI GAANNNNTTC 3 cut(s) 1013, 1256, 1551
MseI TTAA 2 cut(s) 6, 639
MslI CAYNNNNRTG 1 cut(s) 1410
MspI CCGG 1 cut(s) 1793
MspR9I CCNGG 2 cut(s) 374, 1273
Mva1269I GAATGC 1 cut(s) 832
MvaI CCWGG 2 cut(s) 374, 1273
MwoI GCNNNNNNNGC 2 cut(s) 344, 1658
NaeI GCCGGC 1 cut(s) 1794
NdeII GATC 8 cut(s) 193, 284, 1125, 1438, 1473, 1506, 1605, 1714
NgoMIV GCCGGC 1 cut(s) 1792
NlaIII CATG 9 cut(s) 147, 295, 629, 732, 1204, 1241, 1249, 1312, 1579
NlaIV GGNNCC 2 cut(s) 195, 691
NmuCI GTSAC 7 cut(s) 432, 677, 749, 805, 1373, 1453, 1529
NsiI ATGCAT 1 cut(s) 832
NspI RCATGY 2 cut(s) 1241, 1579
NspV TTCGAA 1 cut(s) 605
PaeI GCATGC 1 cut(s) 1241
PaeR7I CTCGAG 1 cut(s) 1719
PctI GAATGC 1 cut(s) 832
PdiI GCCGGC 1 cut(s) 1794
PdmI GAANNNNTTC 3 cut(s) 1013, 1256, 1551
PfeI GAWTC 7 cut(s) 152, 380, 712, 881, 979, 1252, 1348
PkrI GCNGC 3 cut(s) 349, 352, 1816
PleI GAGTC 1 cut(s) 630
PpsI GAGTC 1 cut(s) 630
Ppu21I YACGTR 1 cut(s) 682
PsiI TTATAA 1 cut(s) 815
Psp124BI GAGCTC 1 cut(s) 1745
Psp6I CCWGG 2 cut(s) 372, 1271
PspGI CCWGG 2 cut(s) 372, 1271
PspN4I GGNNCC 2 cut(s) 195, 691
PspPI GGNCC 2 cut(s) 532, 854
PstI CTGCAG 2 cut(s) 352, 1851
PsuI RGATCY 3 cut(s) 193, 1473, 1506
RsaI GTAC 8 cut(s) 684, 760, 766, 785, 1058, 1315, 1329, 1495
RsaNI GTAC 8 cut(s) 683, 759, 765, 784, 1057, 1314, 1328, 1494
RseI CAYNNNNRTG 1 cut(s) 1410
SacI GAGCTC 1 cut(s) 1745
SaqAI TTAA 2 cut(s) 6, 639
SatI GCNGC 3 cut(s) 348, 351, 1815
Sau3AI GATC 8 cut(s) 193, 284, 1125, 1438, 1473, 1506, 1605, 1714
Sau96I GGNCC 2 cut(s) 532, 854
ScaI AGTACT 2 cut(s) 1315, 1495
SchI GAGTC 1 cut(s) 631
ScrFI CCNGG 2 cut(s) 374, 1273
SduI GDGCHC 2 cut(s) 839, 1745
SfaNI GCATC 4 cut(s) 403, 745, 839, 914
SfcI CTRYAG 2 cut(s) 348, 1847
Sfr274I CTCGAG 1 cut(s) 1719
SfuI TTCGAA 1 cut(s) 605
SinI GGWCC 2 cut(s) 532, 854
SlaI CTCGAG 1 cut(s) 1719
SmiMI CAYNNNNRTG 1 cut(s) 1410
SmlI CTYRAG 1 cut(s) 1719
SmoI CTYRAG 1 cut(s) 1719
SpeI ACTAGT 1 cut(s) 1490
SphI GCATGC 1 cut(s) 1241
SsiI CCGC 1 cut(s) 1774
SspI AATATT 2 cut(s) 572, 873
SspMI CTAG 3 cut(s) 123, 461, 1491
SstI GAGCTC 1 cut(s) 1745
StyD4I CCNGG 2 cut(s) 372, 1271
StyI CCWWGG 2 cut(s) 1419, 1662
TaaI ACNGT 5 cut(s) 758, 1050, 1519, 1529, 1801
TaiI ACGT 4 cut(s) 270, 684, 1587, 1760
TatI WGTACW 4 cut(s) 758, 783, 1313, 1493
TfiI GAWTC 7 cut(s) 152, 380, 712, 881, 979, 1252, 1348
Tru1I TTAA 2 cut(s) 6, 639
Tru9I TTAA 2 cut(s) 6, 639
TscAI CASTG 2 cut(s) 195, 441
TseFI GTSAC 7 cut(s) 432, 677, 749, 805, 1373, 1453, 1529
TseI GCWGC 3 cut(s) 347, 350, 1814
Tsp45I GTSAC 7 cut(s) 432, 677, 749, 805, 1373, 1453, 1529
TspDTI ATGAA 7 cut(s) 33, 101, 132, 1163, 1361, 1443, 1560
TspGWI ACGGA 1 cut(s) 1754
TspRI CASTG 2 cut(s) 195, 441
VpaK11BI GGWCC 2 cut(s) 532, 854
XapI RAATTY 5 cut(s) 327, 386, 582, 958, 1009
XceI RCATGY 2 cut(s) 1241, 1579
XhoI CTCGAG 1 cut(s) 1719
XmiI GTMKAC 1 cut(s) 952
XmnI GAANNNNTTC 3 cut(s) 1013, 1256, 1551
XspI CTAG 3 cut(s) 123, 461, 1491
ZrmI AGTACT 2 cut(s) 1315, 1495
Zsp2I ATGCAT 1 cut(s) 832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.