RchiOBHm_Chr1g0381121

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000119
Physical Location & Seq
Reverse (-)
66490372 .. 66492403
2032 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60432

Sequence Viewer

Length: 1596 bp
ATGAACAGTGGAGGACATTCAATATTGTCAGAGACAAAATGGCCTACCTTTAAGGAATTTTTTGACCCCCAGGGGGCCTTCATTGCAATGTGGTATAAGATATCTGTGATTTCATGTCTGATTTTAGTAACCGCAGATCCTTTGTTCTCCTACATCCCCTACATCAACAAAGATAAAAAGGGCATTGATGGGGACAAGAGGGTGAGAACTGCAGCTCTAGCCCTCCGATCACTCACCGAAATGACTTTCATAATGCATATTATACATGAAATTCGTGTTAGTACCAACACTGTGGTGTCAGAGATATCAAAAAGAGGAAAGCCAGGTTGGCCATGGAAAAAGGCAGAGTTACTTGGCTTTGCCAAGGCAATATCTCAGAAGATGTCCTGGTTATCTATCTCCATCATTAGACTTTATAGCCATTCTTCCGATCCCACAACTAATATATTCAATTCATCAATTCTGTGTCTTGTGAAGGTGGCGCTGTTGGTATTCTTTCTGAAAATGGATGGCTCAGATTACAGAAAGAAGATTTTAAACGGGTTCCTGCTCTTTCAATATATGCCAAAGATTTATAGAATCTACCTTTCGTGTAAAGAACTTAAACAAACCGGAATATGGGCTAGAGGTGCATTCAGTATTTTTCTCTACATCCTCGCTAGTCATGTACTTGGAGCCTTTTGGTGTTTCATTTCTATTCAACGAGAGACATCATGCTGGCACAGGGCTTGTGAAGGACATCCTAATATTATAGAATGTATGTCAACTTACTACTGTGATGACACACCTAGAAATCAACAATATATCACACTCCTCAGCAAAAATTGCTCGGCTGCAATTCCATCAAATGCAGCACAATTTAATTTTGGAATCTTCCTTAATGCCCTTGAGCCCGATTTGTCTGATTTTCCCAAGAAGTTCTTTTACTCTTTCTGGTGGGGTCTGCGAAATCTAAGTTCTCTTGGTCAAAATTTGGAAACGAGTACCTATGTGTGCGAAAACTGCTTCGCAATCGTTATATCTCTAATTGGTTTGCTACTATTTTGTATCTTATTGGAAATGTACAGGTTGACGTATATACAGTTGGCAACTACGAAATCGGAAGAGATAAGACAGAAGATGATAATGAAAGAGCTTGAGATACAATGGTGGATGTCCAGAAATCATCTCCCTAACGATATGAAGACAGTGATCATCGAAAACGTAAGACAGAAATTGGAAGAAAACAAAGATGTTCATGTGGAGAATCTACTCTCTATTCTTCCCGGGAAGGACAGAAGGTCCATACAGCGCCTTCTCTGCATGGACTCACTTAAGAAAGTACCGATGCTTCGATATATGGATGAAAGTGTGTTAAAACTCGTCTGCGACAATCTGAAACCAGTAATCTACACGGAGAACAGTTATGTAATTCGAGCAGGAGAACCACTTGATCTAATGCTCTTCAACGCAGAAGGCATTATATGGACTTACACAACAAGTACTGATGGTTCAATAAAATTGGGTTCCTCAATCACACTGTGTCTTGGTAAAGGTGATTTCTATCGAGAAGAACTTTTGAGTTGGGCTTCCTCATGTTGGGCCATCCCTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

531

Amino Acids

61.06

Weight (kDa)

8.76

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 132
AclWI GGATC 2 cut(s) 131, 425
AcoI YGGCCR 1 cut(s) 329
AcsI RAATTY 3 cut(s) 56, 270, 970
AdeI CACNNNGTG 1 cut(s) 1521
AfaI GTAC 6 cut(s) 283, 669, 985, 1064, 1323, 1483
AfiI CCNNNNNNNGG 3 cut(s) 73, 618, 1578
AflII CTTAAG 1 cut(s) 1313
AgsI TTSAA 6 cut(s) 21, 451, 557, 701, 1447, 1494
AhdI GACNNNNNGTC 1 cut(s) 1279
AjnI CCWGG 3 cut(s) 69, 322, 386
AjuI GAANNNNNNNTTGG 2 cut(s) 310, 342
AleI CACNNNNGTG 1 cut(s) 293
AluBI AGCT 2 cut(s) 215, 1135
AluI AGCT 2 cut(s) 215, 1135
Alw26I GTCTC 2 cut(s) 26, 701
AlwI GGATC 2 cut(s) 131, 425
Ama87I CYCGRG 1 cut(s) 1265
AoxI GGCC 4 cut(s) 41, 75, 329, 1581
ApeKI GCWGC 3 cut(s) 212, 833, 851
ApoI RAATTY 3 cut(s) 56, 270, 970
AspLEI GCGC 2 cut(s) 484, 1293
AspS9I GGNCC 3 cut(s) 75, 1281, 1581
AsuC2I CCSGG 2 cut(s) 1266, 1267
AsuHPI GGTGA 3 cut(s) 214, 226, 1547
AvaI CYCGRG 1 cut(s) 1265
AvaII GGWCC 1 cut(s) 1281
BaeI ACNNNNGTAYC 2 cut(s) 1133, 1166
BalI TGGCCA 1 cut(s) 331
BanII GRGCYC 1 cut(s) 894
BarI GAAGNNNNNNTAC 4 cut(s) 908, 940, 1314, 1346
BbsI GAAGAC 1 cut(s) 1190
BbvCI CCTCAGC 1 cut(s) 815
BbvI GCAGC 3 cut(s) 224, 820, 863
BccI CCATC 6 cut(s) 182, 410, 503, 850, 1481, 1592
BciT130I CCWGG 3 cut(s) 71, 324, 388
BclI TGATCA 1 cut(s) 1191
BcnI CCSGG 2 cut(s) 1266, 1267
BcoDI GTCTC 2 cut(s) 26, 701
BfaI CTAG 4 cut(s) 218, 624, 660, 789
BfmI CTRYAG 1 cut(s) 210
BfoI RGCGCY 2 cut(s) 485, 1294
BfrI CTTAAG 1 cut(s) 1313
BglI GCCNNNNNGGC 1 cut(s) 328
BisI GCNGC 3 cut(s) 213, 834, 852
BlsI GCNGC 3 cut(s) 214, 835, 853
BmcAI AGTACT 1 cut(s) 1483
Bme1390I CCNGG 5 cut(s) 71, 324, 388, 1266, 1267
Bme18I GGWCC 1 cut(s) 1281
BmeRI GACNNNNNGTC 1 cut(s) 1279
BmeT110I CYCGRG 1 cut(s) 1265
BmgT120I GGNCC 3 cut(s) 75, 1281, 1581
BmiI GGNNCC 4 cut(s) 76, 545, 676, 1507
BmrFI CCNGG 5 cut(s) 71, 324, 388, 1266, 1267
BmsI GCATC 1 cut(s) 1317
BpiI GAAGAC 1 cut(s) 1190
Bpu10I CCTNAGC 1 cut(s) 815
BpuEI CTTGAG 2 cut(s) 908, 1157
BpuMI CCSGG 2 cut(s) 1266, 1267
BsaBI GATNNNNATC 1 cut(s) 1542
BsaJI CCNNGG 5 cut(s) 69, 70, 332, 363, 1265
BsaWI WCCGGW 1 cut(s) 611
Bsc4I CCNNNNNNNGG 3 cut(s) 73, 618, 1578
Bse1I ACTGG 1 cut(s) 1382
Bse3DI GCAATG 2 cut(s) 81, 93
Bse8I GATNNNNATC 1 cut(s) 1542
BseBI CCWGG 3 cut(s) 71, 324, 388
BseDI CCNNGG 5 cut(s) 69, 70, 332, 363, 1265
BseGI GGATG 7 cut(s) 153, 514, 651, 739, 1158, 1348, 1584
BseJI GATNNNNATC 1 cut(s) 1542
BseLI CCNNNNNNNGG 3 cut(s) 73, 618, 1578
BseMI GCAATG 2 cut(s) 81, 93
BseMII CTCAG 3 cut(s) 389, 528, 829
BseNI ACTGG 1 cut(s) 1382
BseRI GAGGAG 1 cut(s) 803
BseXI GCAGC 3 cut(s) 224, 820, 863
BshFI GGCC 4 cut(s) 43, 77, 331, 1583
BsiHKCI CYCGRG 1 cut(s) 1265
BsiSI CCGG 2 cut(s) 612, 1266
BslFI GGGAC 1 cut(s) 206
BslI CCNNNNNNNGG 3 cut(s) 73, 618, 1578
BsmAI GTCTC 2 cut(s) 26, 701
BsmFI GGGAC 1 cut(s) 206
BsmI GAATGC 1 cut(s) 632
BsnI GGCC 4 cut(s) 43, 77, 331, 1583
BsoBI CYCGRG 1 cut(s) 1265
Bsp1286I GDGCHC 1 cut(s) 894
Bsp1407I TGTACA 1 cut(s) 1062
Bsp143I GATC 5 cut(s) 136, 227, 430, 1191, 1432
Bsp19I CCATGG 1 cut(s) 332
BspACI CCGC 1 cut(s) 132
BspANI GGCC 4 cut(s) 43, 77, 331, 1583
BspCNI CTCAG 3 cut(s) 388, 527, 828
BspLI GGNNCC 4 cut(s) 76, 545, 676, 1507
BspMAI CTGCAG 1 cut(s) 214
BspPI GGATC 2 cut(s) 131, 425
BspQI GCTCTTC 1 cut(s) 1448
BspTI CTTAAG 1 cut(s) 1313
BsrDI GCAATG 2 cut(s) 81, 93
BsrGI TGTACA 1 cut(s) 1062
BsrI ACTGG 1 cut(s) 1382
BssECI CCNNGG 5 cut(s) 69, 70, 332, 363, 1265
BssMI GATC 5 cut(s) 136, 227, 430, 1191, 1432
BssT1I CCWWGG 2 cut(s) 332, 363
Bst2UI CCWGG 3 cut(s) 71, 324, 388
Bst4CI ACNGT 7 cut(s) 8, 292, 776, 1083, 1189, 1403, 1521
Bst6I CTCTTC 2 cut(s) 1098, 1448
BstAFI CTTAAG 1 cut(s) 1313
BstAPI GCANNNNNTGC 1 cut(s) 825
BstAUI TGTACA 1 cut(s) 1062
BstC8I GCNNGC 1 cut(s) 719
BstDEI CTNAG 4 cut(s) 375, 514, 815, 953
BstDSI CCRYGG 1 cut(s) 332
BstF5I GGATG 7 cut(s) 153, 514, 651, 739, 1158, 1348, 1584
BstH2I RGCGCY 2 cut(s) 485, 1294
BstHHI GCGC 2 cut(s) 484, 1293
BstKTI GATC 5 cut(s) 139, 230, 433, 1194, 1435
BstMAI GTCTC 2 cut(s) 26, 701
BstMBI GATC 5 cut(s) 136, 227, 430, 1191, 1432
BstMWI GCNNNNNNNGC 7 cut(s) 83, 218, 328, 629, 825, 1002, 1299
BstNI CCWGG 3 cut(s) 71, 324, 388
BstSCI CCNGG 5 cut(s) 69, 322, 386, 1264, 1265
BstSFI CTRYAG 1 cut(s) 210
BstV1I GCAGC 3 cut(s) 224, 820, 863
BstV2I GAAGAC 1 cut(s) 1190
BstX2I RGATCY 1 cut(s) 136
BstXI CCANNNNNNTGG 1 cut(s) 292
BstYI RGATCY 1 cut(s) 136
BsuRI GGCC 4 cut(s) 43, 77, 331, 1583
BtgI CCRYGG 1 cut(s) 332
BtsCI GGATG 7 cut(s) 153, 514, 651, 739, 1158, 1348, 1584
BtsIMutI CAGTG 4 cut(s) 13, 288, 1194, 1517
Cac8I GCNNGC 1 cut(s) 719
CfoI GCGC 2 cut(s) 484, 1293
Cfr13I GGNCC 3 cut(s) 75, 1281, 1581
Cfr9I CCCGGG 1 cut(s) 1265
Csp6I GTAC 6 cut(s) 282, 668, 984, 1063, 1322, 1482
CviAII CATG 8 cut(s) 114, 266, 333, 665, 714, 1238, 1303, 1575
CviQI GTAC 6 cut(s) 282, 668, 984, 1063, 1322, 1482
DdeI CTNAG 4 cut(s) 375, 514, 815, 953
DpnI GATC 5 cut(s) 138, 229, 432, 1193, 1434
DpnII GATC 5 cut(s) 136, 227, 430, 1191, 1432
DraI TTTAAA 1 cut(s) 537
DraIII CACNNNGTG 1 cut(s) 1521
DriI GACNNNNNGTC 1 cut(s) 1279
EaeI YGGCCR 1 cut(s) 329
Eam1104I CTCTTC 2 cut(s) 1098, 1448
Eam1105I GACNNNNNGTC 1 cut(s) 1279
EarI CTCTTC 2 cut(s) 1098, 1448
Eco130I CCWWGG 2 cut(s) 332, 363
Eco24I GRGCYC 1 cut(s) 894
Eco32I GATATC 2 cut(s) 102, 306
Eco47I GGWCC 1 cut(s) 1281
Eco88I CYCGRG 1 cut(s) 1265
EcoO109I RGGNCCY 1 cut(s) 75
EcoRII CCWGG 3 cut(s) 69, 322, 386
EcoRV GATATC 2 cut(s) 102, 306
EcoT14I CCWWGG 2 cut(s) 332, 363
EcoT22I ATGCAT 1 cut(s) 258
EcoT38I GRGCYC 1 cut(s) 894
ErhI CCWWGG 2 cut(s) 332, 363
FaeI CATG 8 cut(s) 117, 269, 336, 668, 717, 1241, 1306, 1578
FalI AAGNNNNNCTT 2 cut(s) 905, 937
FaqI GGGAC 1 cut(s) 206
FatI CATG 8 cut(s) 113, 265, 332, 664, 713, 1237, 1302, 1574
FbaI TGATCA 1 cut(s) 1191
Fnu4HI GCNGC 3 cut(s) 213, 834, 852
FokI GGATG 7 cut(s) 140, 521, 638, 726, 1165, 1355, 1571
FriOI GRGCYC 1 cut(s) 894
Fsp4HI GCNGC 3 cut(s) 213, 834, 852
FspBI CTAG 4 cut(s) 218, 624, 660, 789
GlaI GCGC 2 cut(s) 483, 1292
GluI GCNGC 3 cut(s) 213, 834, 852
HaeII RGCGCY 2 cut(s) 485, 1294
HaeIII GGCC 4 cut(s) 43, 77, 331, 1583
HapII CCGG 2 cut(s) 612, 1266
HhaI GCGC 2 cut(s) 484, 1293
Hin1II CATG 8 cut(s) 117, 269, 336, 668, 717, 1241, 1306, 1578
Hin6I GCGC 2 cut(s) 482, 1291
HinP1I GCGC 2 cut(s) 482, 1291
HincII GTYRAC 2 cut(s) 765, 1071
HindII GTYRAC 2 cut(s) 765, 1071
HinfI GANTC 4 cut(s) 579, 870, 1246, 1307
HpaII CCGG 2 cut(s) 612, 1266
HphI GGTGA 3 cut(s) 214, 226, 1547
Hpy166II GTNNAC 2 cut(s) 765, 1071
Hpy188III TCNNGA 2 cut(s) 1158, 1547
Hpy8I GTNNAC 2 cut(s) 765, 1071
HpyAV CCTTC 7 cut(s) 88, 469, 728, 1264, 1272, 1304, 1448
HpyCH4III ACNGT 7 cut(s) 8, 292, 776, 1083, 1189, 1403, 1521
HpyCH4IV ACGT 2 cut(s) 1073, 1203
HpyCH4V TGCA 7 cut(s) 86, 212, 256, 632, 836, 851, 1302
HpyF10VI GCNNNNNNNGC 7 cut(s) 83, 218, 328, 629, 825, 1002, 1299
HpyF3I CTNAG 4 cut(s) 375, 514, 815, 953
HpySE526I ACGT 2 cut(s) 1073, 1203
Hsp92II CATG 8 cut(s) 117, 269, 336, 668, 717, 1241, 1306, 1578
HspAI GCGC 2 cut(s) 482, 1291
Ksp22I TGATCA 1 cut(s) 1191
Kzo9I GATC 5 cut(s) 136, 227, 430, 1191, 1432
LguI GCTCTTC 1 cut(s) 1448
LmnI GCTCC 1 cut(s) 674
Lsp1109I GCAGC 3 cut(s) 224, 820, 863
LweI GCATC 1 cut(s) 1317
MaeI CTAG 4 cut(s) 218, 624, 660, 789
MaeII ACGT 2 cut(s) 1073, 1203
MaeIII GTNAC 2 cut(s) 127, 348
MalI GATC 5 cut(s) 138, 229, 432, 1193, 1434
MboI GATC 5 cut(s) 136, 227, 430, 1191, 1432
MflI RGATCY 1 cut(s) 136
MhlI GDGCHC 1 cut(s) 894
MlsI TGGCCA 1 cut(s) 331
MluNI TGGCCA 1 cut(s) 331
MlyI GAGTC 1 cut(s) 1301
MnlI CCTC 9 cut(s) 5, 192, 233, 308, 620, 665, 824, 1519, 1582
Mox20I TGGCCA 1 cut(s) 331
Mph1103I ATGCAT 1 cut(s) 258
MscI TGGCCA 1 cut(s) 331
MseI TTAA 8 cut(s) 51, 536, 603, 861, 879, 1314, 1355, 1594
MslI CAYNNNNRTG 3 cut(s) 86, 239, 293
Msp20I TGGCCA 1 cut(s) 331
MspCI CTTAAG 1 cut(s) 1313
MspI CCGG 2 cut(s) 612, 1266
MspR9I CCNGG 5 cut(s) 71, 324, 388, 1266, 1267
Mva1269I GAATGC 1 cut(s) 632
MvaI CCWGG 3 cut(s) 71, 324, 388
MwoI GCNNNNNNNGC 7 cut(s) 83, 218, 328, 629, 825, 1002, 1299
NciI CCSGG 2 cut(s) 1266, 1267
NcoI CCATGG 1 cut(s) 332
NdeII GATC 5 cut(s) 136, 227, 430, 1191, 1432
NlaIII CATG 8 cut(s) 117, 269, 336, 668, 717, 1241, 1306, 1578
NlaIV GGNNCC 4 cut(s) 76, 545, 676, 1507
NmeAIII GCCGAG 1 cut(s) 809
NsiI ATGCAT 1 cut(s) 258
OliI CACNNNNGTG 1 cut(s) 293
PasI CCCWGGG 1 cut(s) 70
PciSI GCTCTTC 1 cut(s) 1448
PctI GAATGC 1 cut(s) 632
PfeI GAWTC 3 cut(s) 579, 870, 1246
PkrI GCNGC 3 cut(s) 214, 835, 853
PleI GAGTC 1 cut(s) 1301
PpsI GAGTC 1 cut(s) 1301
Psp6I CCWGG 3 cut(s) 69, 322, 386
PspGI CCWGG 3 cut(s) 69, 322, 386
PspN4I GGNNCC 4 cut(s) 76, 545, 676, 1507
PspPI GGNCC 3 cut(s) 75, 1281, 1581
PsrI GAACNNNNNNTAC 2 cut(s) 1474, 1506
PstI CTGCAG 1 cut(s) 214
PsuI RGATCY 1 cut(s) 136
RsaI GTAC 6 cut(s) 283, 669, 985, 1064, 1323, 1483
RsaNI GTAC 6 cut(s) 282, 668, 984, 1063, 1322, 1482
RseI CAYNNNNRTG 3 cut(s) 86, 239, 293
SapI GCTCTTC 1 cut(s) 1448
SaqAI TTAA 8 cut(s) 51, 536, 603, 861, 879, 1314, 1355, 1594
SatI GCNGC 3 cut(s) 213, 834, 852
Sau3AI GATC 5 cut(s) 136, 227, 430, 1191, 1432
Sau96I GGNCC 3 cut(s) 75, 1281, 1581
ScaI AGTACT 1 cut(s) 1483
SchI GAGTC 1 cut(s) 1301
ScrFI CCNGG 5 cut(s) 71, 324, 388, 1266, 1267
SduI GDGCHC 1 cut(s) 894
SfaNI GCATC 1 cut(s) 1317
SfcI CTRYAG 1 cut(s) 210
SinI GGWCC 1 cut(s) 1281
SmaI CCCGGG 1 cut(s) 1267
SmiMI CAYNNNNRTG 3 cut(s) 86, 239, 293
SmlI CTYRAG 3 cut(s) 887, 1136, 1313
SmoI CTYRAG 3 cut(s) 887, 1136, 1313
SsiI CCGC 1 cut(s) 132
SspI AATATT 2 cut(s) 24, 748
SspMI CTAG 4 cut(s) 218, 624, 660, 789
StyD4I CCNGG 5 cut(s) 69, 322, 386, 1264, 1265
StyI CCWWGG 2 cut(s) 332, 363
TaaI ACNGT 7 cut(s) 8, 292, 776, 1083, 1189, 1403, 1521
TaiI ACGT 2 cut(s) 1076, 1206
TaqI TCGA 4 cut(s) 1197, 1333, 1414, 1546
TatI WGTACW 3 cut(s) 667, 1062, 1481
TfiI GAWTC 3 cut(s) 579, 870, 1246
Tru1I TTAA 8 cut(s) 51, 536, 603, 861, 879, 1314, 1355, 1594
Tru9I TTAA 8 cut(s) 51, 536, 603, 861, 879, 1314, 1355, 1594
TscAI CASTG 4 cut(s) 13, 295, 1194, 1524
TseI GCWGC 3 cut(s) 212, 833, 851
TspGWI ACGGA 1 cut(s) 1409
TspMI CCCGGG 1 cut(s) 1265
TspRI CASTG 4 cut(s) 13, 295, 1194, 1524
Vha464I CTTAAG 1 cut(s) 1313
VpaK11BI GGWCC 1 cut(s) 1281
XapI RAATTY 3 cut(s) 56, 270, 970
XcmI CCANNNNNNNNNTGG 1 cut(s) 330
XmaI CCCGGG 1 cut(s) 1265
XspI CTAG 4 cut(s) 218, 624, 660, 789
ZrmI AGTACT 1 cut(s) 1483
Zsp2I ATGCAT 1 cut(s) 258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.