Rh1BG409000

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000119
Physical Location & Seq
Reverse (-)
53151056 .. 53164894
13839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG409000.1

Sequence Viewer

Length: 1902 bp
ATGTATCCTACTTCATTGTCAGAGCTCCATACTTCGCTCTTAGCTGCCAGTACTACAAGTTGTCTACTTGATCACCATTTCCTGAAGACTGCGGTTGGGAAAATTGCTGGAGTACCCTGCTACGATGATGAGAGCATCATCGATTTCAGCGGTTCATTTGAAATAGGTTATGATTTCAACTGTCCAGTACCGCGGACACGCCGCGAACTTGGAGAAGCTCAAGCAAGCAACAAAGGGAAAAGGCCAACAGTTGCGGAAATTCTCTCAGTTTTGAACCCACGGTGGAGTACGATACTATTAACTTCATGGGTGATTGCAGTTTTATCTGATCCTTTGTTCTTTTACATTCCATACATCAAAGAGGAAGAAAAGTGCATGGGAATCGATAAAAAAGTGCGGACTGCAGCTCTGGTTTTTCGATCAGTCACGGACATCACTCTCCTAGTGCATATCATATACCAACTTCGCGAAGCTATCAAATTTGCAGCCTCAAAGGTTCCAAGGGATACAAATTCATATTATTGGGAACAGAAATCGGTATCCCGAGCTCAGATGATAAAGTTTGCGAAGGAATTTTCTCGCAAATTGTCATGGCGCTCTTTCCTAACTGATGTTTTCGCTATTTTCCCCATGCCACAAGTTCTAATAGTGATTGTCTTCTTCGGAAAGAGGGACTTTGGATATTTGGATAAAAAAGTTCTAAATATCTTTCTTCTCATCCAATATTGGCCAAGGATTTGTCTACTGCGCCGATCGTTCAAGGAACTTAGCACTGGGATATTGGCCCGTGTTGCATTTAATTTCTTTTTGTACCTCTATGCCGGTTATGTACTTGGAGCATTGTGGTATTTTATTTCTATTCAACGAGAAATGTCATGTTGGTACCGCACTTGTATAAAGTACAGTAATGCATGCAATACTTTTCATTGCGATGATGATAGTTCAAAAAATATTATATTGATAGATGAATCTTGCCCAATGAATCCACCGAATGCTACTGTGTTTGATTTTGGAATATTTACTAATTCCCTTCAATCGAGTAGTACAGGATCGGTAAACTTTTCAACAAAGATGTTTTATTCGTTCTGGTGGGGCTTACGGAATCTAAGTAATTTTGCCACTAATCTCGAAACAAGTAATTATTTGTGGGAGAACTGCTTTGCCATTGTACTCTCCATCACTGGCTTGATATCATTTTTATATCTCATCGGATATAATGTGCAGAAGGCTATGGAGAAATATAAGGAAAAGGAAGTGGAAGTACTGGAGCAGAGAAGAGAGAGGATTCAAAAGAAAAAGCAAGATATAGAAAATTGGATGGTAAAAAAAGGTCTCCAAAATGACATGAGGGAAGAGATCATGAAAAACATCAAGCCAAAATTGGAAGAGGACATAAATGCAGATCTGGACGATCTATCGATTCTATTCTCTATTCTTCCGTGGCATACCAAGAAAGCTCTAAAGCGCGTACTCTGCATGAGTGCGCTAAGAAAAATGGGAGAACCAGTTGATCGAATGGTCTTCATTACAGAAGGGCTTATGTGGACTTACACGACTGCTACTGAGAGTAGTCATTATGGAAAAGCAACAAAACCGGCTACTTCTCCATCCATGGATACCAACTTCCTCAAGAAGGGTGATTCTTATGGACACGCGCTTCTGCAGTTTGCATCATCATCTCTTGCGGCACTCCCTGCCTCGAACGCAAATGTCCGGTGTCACACAAGGGTTGAGGCGTTTGTTCTCATGGCCAAGGACTTGAAAAACATAGTAACTAAATACGAACATTTGTGGTCTTTCGACTACAATACTTCTAAAGATGAGGCGGCGGATAAGGTGGCACCACTGGGGCAGTTGCCAAAGAAGTGTGTATCAACATCGACCACTGGCAACCGTGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

633

Amino Acids

72.5

Weight (kDa)

8.97

Isoelectric Point (pI)

42.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 882
AccB1I GGYRCC 2 cut(s) 882, 1840
AccI GTMKAC 2 cut(s) 64, 742
AccII CGCG 5 cut(s) 193, 204, 468, 1467, 1655
AclWI GGATC 2 cut(s) 323, 1057
AcoI YGGCCR 2 cut(s) 728, 1749
AcsI RAATTY 4 cut(s) 258, 479, 511, 572
AcuI CTGAAG 1 cut(s) 104
AfiI CCNNNNNNNGG 1 cut(s) 1633
AluBI AGCT 7 cut(s) 25, 44, 218, 407, 473, 548, 1457
AluI AGCT 7 cut(s) 25, 44, 218, 407, 473, 548, 1457
Alw21I GWGCWC 2 cut(s) 27, 550
Alw26I GTCTC 1 cut(s) 1337
AlwI GGATC 2 cut(s) 323, 1057
Ama87I CYCGRG 1 cut(s) 543
AoxI GGCC 4 cut(s) 242, 728, 783, 1749
ApeKI GCWGC 3 cut(s) 44, 404, 485
ApoI RAATTY 4 cut(s) 258, 479, 511, 572
Asp718I GGTACC 1 cut(s) 882
AspLEI GCGC 5 cut(s) 597, 750, 1467, 1486, 1657
AspS9I GGNCC 1 cut(s) 784
AsuHPI GGTGA 3 cut(s) 65, 322, 1649
AvaI CYCGRG 1 cut(s) 543
BalI TGGCCA 2 cut(s) 730, 1751
BanI GGYRCC 2 cut(s) 882, 1840
BanII GRGCYC 2 cut(s) 27, 550
BarI GAAGNNNNNNTAC 2 cut(s) 1245, 1277
BbsI GAAGAC 3 cut(s) 92, 649, 1513
Bbv12I GWGCWC 2 cut(s) 27, 550
BbvI GCAGC 3 cut(s) 31, 416, 497
BccI CCATC 3 cut(s) 1184, 1312, 1615
BcgI CGANNNNNNTGC 2 cut(s) 364, 398
BciVI GTATCC 4 cut(s) 15, 499, 550, 1609
BclI TGATCA 1 cut(s) 70
BcoDI GTCTC 1 cut(s) 1337
BfaI CTAG 1 cut(s) 443
BfmI CTRYAG 2 cut(s) 402, 1661
BfoI RGCGCY 1 cut(s) 598
BfuI GTATCC 4 cut(s) 15, 499, 550, 1609
BglII AGATCT 1 cut(s) 1402
BisI GCNGC 6 cut(s) 45, 202, 405, 486, 1686, 1827
BlsI GCNGC 6 cut(s) 46, 203, 406, 487, 1687, 1828
BmcAI AGTACT 2 cut(s) 52, 1263
BmeT110I CYCGRG 1 cut(s) 543
BmgT120I GGNCC 1 cut(s) 784
BmiI GGNNCC 3 cut(s) 498, 884, 1842
BmrI ACTGGG 2 cut(s) 783, 1856
BmsI GCATC 2 cut(s) 144, 1679
BmuI ACTGGG 2 cut(s) 783, 1856
BpiI GAAGAC 3 cut(s) 92, 649, 1513
BpmI CTGGAG 2 cut(s) 129, 1286
BpuEI CTTGAG 2 cut(s) 204, 1613
Bsa29I ATCGAT 3 cut(s) 141, 384, 1418
BsaI GGTCTC 1 cut(s) 1337
BsaJI CCNNGG 8 cut(s) 191, 278, 500, 731, 1439, 1611, 1752, 1894
BsaWI WCCGGW 1 cut(s) 1713
BsaXI ACNNNNNCTCC 2 cut(s) 1491, 1521
Bsc4I CCNNNNNNNGG 1 cut(s) 1633
Bse118I RCCGGY 2 cut(s) 821, 1594
Bse1I ACTGG 8 cut(s) 48, 185, 778, 1186, 1269, 1505, 1851, 1891
Bse3DI GCAATG 1 cut(s) 925
BseCI ATCGAT 3 cut(s) 141, 384, 1418
BseDI CCNNGG 8 cut(s) 191, 278, 500, 731, 1439, 1611, 1752, 1894
BseGI GGATG 3 cut(s) 717, 1323, 1607
BseLI CCNNNNNNNGG 1 cut(s) 1633
BseMI GCAATG 1 cut(s) 925
BseMII CTCAG 3 cut(s) 279, 563, 1554
BseNI ACTGG 8 cut(s) 48, 185, 778, 1186, 1269, 1505, 1851, 1891
BseXI GCAGC 3 cut(s) 31, 416, 497
BsgI GTGCAG 1 cut(s) 1241
Bsh1236I CGCG 5 cut(s) 193, 204, 468, 1467, 1655
Bsh1285I CGRYCG 1 cut(s) 755
BshFI GGCC 4 cut(s) 244, 730, 785, 1751
BshNI GGYRCC 2 cut(s) 882, 1840
BshVI ATCGAT 3 cut(s) 141, 384, 1418
BsiEI CGRYCG 1 cut(s) 755
BsiHKAI GWGCWC 2 cut(s) 27, 550
BsiHKCI CYCGRG 1 cut(s) 543
BsiSI CCGG 3 cut(s) 822, 1595, 1714
BslFI GGGAC 1 cut(s) 686
BslI CCNNNNNNNGG 1 cut(s) 1633
BsmAI GTCTC 1 cut(s) 1337
BsmFI GGGAC 1 cut(s) 686
BsmI GAATGC 1 cut(s) 997
BsnI GGCC 4 cut(s) 244, 730, 785, 1751
Bso31I GGTCTC 1 cut(s) 1337
BsoBI CYCGRG 1 cut(s) 543
Bsp1286I GDGCHC 2 cut(s) 27, 550
Bsp143I GATC 9 cut(s) 70, 328, 419, 752, 1049, 1356, 1402, 1411, 1510
Bsp19I CCATGG 1 cut(s) 1611
Bsp68I TCGCGA 1 cut(s) 468
BspANI GGCC 4 cut(s) 244, 730, 785, 1751
BspCNI CTCAG 3 cut(s) 278, 562, 1555
BspDI ATCGAT 3 cut(s) 141, 384, 1418
BspFNI CGCG 5 cut(s) 193, 204, 468, 1467, 1655
BspHI TCATGA 1 cut(s) 1359
BspLI GGNNCC 3 cut(s) 498, 884, 1842
BspMAI CTGCAG 2 cut(s) 406, 1665
BspPI GGATC 2 cut(s) 323, 1057
BspT107I GGYRCC 2 cut(s) 882, 1840
BspTNI GGTCTC 1 cut(s) 1337
BsrDI GCAATG 1 cut(s) 925
BsrFI RCCGGY 2 cut(s) 821, 1594
BsrI ACTGG 8 cut(s) 48, 185, 778, 1186, 1269, 1505, 1851, 1891
BssAI RCCGGY 2 cut(s) 821, 1594
BssECI CCNNGG 8 cut(s) 191, 278, 500, 731, 1439, 1611, 1752, 1894
BssMI GATC 9 cut(s) 70, 328, 419, 752, 1049, 1356, 1402, 1411, 1510
BssT1I CCWWGG 4 cut(s) 500, 731, 1611, 1752
Bst4CI ACNGT 6 cut(s) 182, 250, 282, 905, 1000, 1895
Bst6I CTCTTC 3 cut(s) 1270, 1347, 1380
BstAPI GCANNNNNTGC 1 cut(s) 1694
BstC8I GCNNGC 2 cut(s) 226, 913
BstDEI CTNAG 7 cut(s) 40, 265, 549, 767, 1106, 1487, 1563
BstDSI CCRYGG 5 cut(s) 191, 278, 1439, 1611, 1894
BstENI CCTNNNNNAGG 1 cut(s) 1631
BstF5I GGATG 3 cut(s) 717, 1323, 1607
BstFNI CGCG 5 cut(s) 193, 204, 468, 1467, 1655
BstH2I RGCGCY 1 cut(s) 598
BstHHI GCGC 5 cut(s) 597, 750, 1467, 1486, 1657
BstKTI GATC 9 cut(s) 73, 331, 422, 755, 1052, 1359, 1405, 1414, 1513
BstMAI GTCTC 1 cut(s) 1337
BstMBI GATC 9 cut(s) 70, 328, 419, 752, 1049, 1356, 1402, 1411, 1510
BstMCI CGRYCG 1 cut(s) 755
BstMWI GCNNNNNNNGC 4 cut(s) 791, 1473, 1694, 1703
BstNSI RCATGY 1 cut(s) 915
BstSFI CTRYAG 2 cut(s) 402, 1661
BstUI CGCG 5 cut(s) 193, 204, 468, 1467, 1655
BstV1I GCAGC 3 cut(s) 31, 416, 497
BstV2I GAAGAC 3 cut(s) 92, 649, 1513
BstX2I RGATCY 1 cut(s) 1402
BstYI RGATCY 1 cut(s) 1402
Bsu15I ATCGAT 3 cut(s) 141, 384, 1418
BsuI GTATCC 4 cut(s) 15, 499, 550, 1609
BsuRI GGCC 4 cut(s) 244, 730, 785, 1751
BsuTUI ATCGAT 3 cut(s) 141, 384, 1418
BtgI CCRYGG 5 cut(s) 191, 278, 1439, 1611, 1894
BtgZI GCGATG 1 cut(s) 945
BtsCI GGATG 3 cut(s) 717, 1323, 1607
BtsIMutI CAGTG 4 cut(s) 771, 1179, 1844, 1884
BtuMI TCGCGA 1 cut(s) 468
Cac8I GCNNGC 2 cut(s) 226, 913
CciI TCATGA 1 cut(s) 1359
CfoI GCGC 5 cut(s) 597, 750, 1467, 1486, 1657
Cfr10I RCCGGY 2 cut(s) 821, 1594
Cfr13I GGNCC 1 cut(s) 784
Cfr42I CCGCGG 1 cut(s) 194
ClaI ATCGAT 3 cut(s) 141, 384, 1418
DdeI CTNAG 7 cut(s) 40, 265, 549, 767, 1106, 1487, 1563
DpnI GATC 9 cut(s) 72, 330, 421, 754, 1051, 1358, 1404, 1413, 1512
DpnII GATC 9 cut(s) 70, 328, 419, 752, 1049, 1356, 1402, 1411, 1510
EaeI YGGCCR 2 cut(s) 728, 1749
Eam1104I CTCTTC 3 cut(s) 1270, 1347, 1380
EarI CTCTTC 3 cut(s) 1270, 1347, 1380
EciI GGCGGA 1 cut(s) 1844
Ecl136II GAGCTC 2 cut(s) 25, 548
Eco130I CCWWGG 4 cut(s) 500, 731, 1611, 1752
Eco24I GRGCYC 2 cut(s) 27, 550
Eco31I GGTCTC 1 cut(s) 1337
Eco32I GATATC 1 cut(s) 1191
Eco53kI GAGCTC 2 cut(s) 25, 548
Eco57I CTGAAG 1 cut(s) 104
Eco88I CYCGRG 1 cut(s) 543
EcoICRI GAGCTC 2 cut(s) 25, 548
EcoNI CCTNNNNNAGG 1 cut(s) 1631
EcoRV GATATC 1 cut(s) 1191
EcoT14I CCWWGG 4 cut(s) 500, 731, 1611, 1752
EcoT22I ATGCAT 1 cut(s) 913
EcoT38I GRGCYC 2 cut(s) 27, 550
ErhI CCWWGG 4 cut(s) 500, 731, 1611, 1752
FalI AAGNNNNNCTT 2 cut(s) 659, 691
FaqI GGGAC 1 cut(s) 686
FbaI TGATCA 1 cut(s) 70
FblI GTMKAC 2 cut(s) 64, 742
Fnu4HI GCNGC 6 cut(s) 45, 202, 405, 486, 1686, 1827
FokI GGATG 3 cut(s) 704, 1330, 1594
FriOI GRGCYC 2 cut(s) 27, 550
Fsp4HI GCNGC 6 cut(s) 45, 202, 405, 486, 1686, 1827
FspBI CTAG 1 cut(s) 443
GlaI GCGC 5 cut(s) 596, 749, 1466, 1485, 1656
GluI GCNGC 6 cut(s) 45, 202, 405, 486, 1686, 1827
GsuI CTGGAG 2 cut(s) 129, 1286
HaeII RGCGCY 1 cut(s) 598
HaeIII GGCC 4 cut(s) 244, 730, 785, 1751
HapII CCGG 3 cut(s) 822, 1595, 1714
HhaI GCGC 5 cut(s) 597, 750, 1467, 1486, 1657
Hin6I GCGC 5 cut(s) 595, 748, 1465, 1484, 1655
HinP1I GCGC 5 cut(s) 595, 748, 1465, 1484, 1655
HinfI GANTC 7 cut(s) 381, 968, 982, 1102, 1285, 1420, 1640
HpaII CCGG 3 cut(s) 822, 1595, 1714
HphI GGTGA 3 cut(s) 65, 322, 1649
Hpy166II GTNNAC 4 cut(s) 65, 743, 1057, 1545
Hpy188I TCNGA 5 cut(s) 22, 328, 552, 665, 1211
Hpy188III TCNNGA 7 cut(s) 82, 467, 543, 1127, 1360, 1406, 1630
Hpy8I GTNNAC 4 cut(s) 65, 743, 1057, 1545
HpyAV CCTTC 5 cut(s) 562, 1040, 1219, 1526, 1627
HpyCH4III ACNGT 6 cut(s) 182, 250, 282, 905, 1000, 1895
HpyF10VI GCNNNNNNNGC 4 cut(s) 791, 1473, 1694, 1703
HpyF3I CTNAG 7 cut(s) 40, 265, 549, 767, 1106, 1487, 1563
HspAI GCGC 5 cut(s) 595, 748, 1465, 1484, 1655
KpnI GGTACC 1 cut(s) 886
Ksp22I TGATCA 1 cut(s) 70
KspI CCGCGG 1 cut(s) 194
Kzo9I GATC 9 cut(s) 70, 328, 419, 752, 1049, 1356, 1402, 1411, 1510
LmnI GCTCC 3 cut(s) 30, 836, 1267
Lsp1109I GCAGC 3 cut(s) 31, 416, 497
LweI GCATC 2 cut(s) 144, 1679
MaeI CTAG 1 cut(s) 443
MaeIII GTNAC 3 cut(s) 424, 1718, 1771
MalI GATC 9 cut(s) 72, 330, 421, 754, 1051, 1358, 1404, 1413, 1512
MboI GATC 9 cut(s) 70, 328, 419, 752, 1049, 1356, 1402, 1411, 1510
MflI RGATCY 1 cut(s) 1402
MhlI GDGCHC 2 cut(s) 27, 550
MlsI TGGCCA 2 cut(s) 730, 1751
MluNI TGGCCA 2 cut(s) 730, 1751
Mox20I TGGCCA 2 cut(s) 730, 1751
Mph1103I ATGCAT 1 cut(s) 913
MscI TGGCCA 2 cut(s) 730, 1751
MseI TTAA 2 cut(s) 299, 798
MslI CAYNNNNRTG 1 cut(s) 930
Msp20I TGGCCA 2 cut(s) 730, 1751
MspA1I CMGCKG 2 cut(s) 150, 193
MspI CCGG 3 cut(s) 822, 1595, 1714
Mva1269I GAATGC 1 cut(s) 997
MvnI CGCG 5 cut(s) 193, 204, 468, 1467, 1655
MwoI GCNNNNNNNGC 4 cut(s) 791, 1473, 1694, 1703
NcoI CCATGG 1 cut(s) 1611
NdeII GATC 9 cut(s) 70, 328, 419, 752, 1049, 1356, 1402, 1411, 1510
NlaIV GGNNCC 3 cut(s) 498, 884, 1842
NmuCI GTSAC 2 cut(s) 424, 1718
NruI TCGCGA 1 cut(s) 468
NsiI ATGCAT 1 cut(s) 913
NspI RCATGY 1 cut(s) 915
PaeI GCATGC 1 cut(s) 915
PagI TCATGA 1 cut(s) 1359
PctI GAATGC 1 cut(s) 997
PfeI GAWTC 7 cut(s) 381, 968, 982, 1102, 1285, 1420, 1640
PkrI GCNGC 6 cut(s) 46, 203, 406, 487, 1687, 1828
Ple19I CGATCG 1 cut(s) 755
Psp124BI GAGCTC 2 cut(s) 27, 550
PspN4I GGNNCC 3 cut(s) 498, 884, 1842
PspPI GGNCC 1 cut(s) 784
PstI CTGCAG 2 cut(s) 406, 1665
PsuI RGATCY 1 cut(s) 1402
PvuI CGATCG 1 cut(s) 755
RruI TCGCGA 1 cut(s) 468
RseI CAYNNNNRTG 1 cut(s) 930
SacI GAGCTC 2 cut(s) 27, 550
SacII CCGCGG 1 cut(s) 194
SaqAI TTAA 2 cut(s) 299, 798
SatI GCNGC 6 cut(s) 45, 202, 405, 486, 1686, 1827
Sau3AI GATC 9 cut(s) 70, 328, 419, 752, 1049, 1356, 1402, 1411, 1510
Sau96I GGNCC 1 cut(s) 784
ScaI AGTACT 2 cut(s) 52, 1263
SduI GDGCHC 2 cut(s) 27, 550
SfaNI GCATC 2 cut(s) 144, 1679
SfcI CTRYAG 2 cut(s) 402, 1661
Sfr303I CCGCGG 1 cut(s) 194
SgrBI CCGCGG 1 cut(s) 194
SmiMI CAYNNNNRTG 1 cut(s) 930
SmlI CTYRAG 2 cut(s) 219, 1628
SmoI CTYRAG 2 cut(s) 219, 1628
SphI GCATGC 1 cut(s) 915
SspI AATATT 3 cut(s) 725, 952, 1017
SspMI CTAG 1 cut(s) 443
SstI GAGCTC 2 cut(s) 27, 550
StyI CCWWGG 4 cut(s) 500, 731, 1611, 1752
TaaI ACNGT 6 cut(s) 182, 250, 282, 905, 1000, 1895
TatI WGTACW 6 cut(s) 50, 829, 900, 1043, 1168, 1261
TauI GCSGC 3 cut(s) 204, 1688, 1829
TfiI GAWTC 7 cut(s) 381, 968, 982, 1102, 1285, 1420, 1640
Tru1I TTAA 2 cut(s) 299, 798
Tru9I TTAA 2 cut(s) 299, 798
TscAI CASTG 4 cut(s) 778, 1186, 1851, 1891
TseFI GTSAC 2 cut(s) 424, 1718
TseI GCWGC 3 cut(s) 44, 404, 485
Tsp45I GTSAC 2 cut(s) 424, 1718
TspDTI ATGAA 8 cut(s) 144, 294, 504, 914, 981, 995, 1376, 1513
TspGWI ACGGA 3 cut(s) 443, 1114, 1428
TspRI CASTG 4 cut(s) 778, 1186, 1851, 1891
XagI CCTNNNNNAGG 1 cut(s) 1631
XapI RAATTY 4 cut(s) 258, 479, 511, 572
XceI RCATGY 1 cut(s) 915
XmiI GTMKAC 2 cut(s) 64, 742
XspI CTAG 1 cut(s) 443
ZrmI AGTACT 2 cut(s) 52, 1263
Zsp2I ATGCAT 1 cut(s) 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.