Prupe.1G162800_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000119
Physical Location & Seq
Forward (+)
13085454 .. 13089053
3600 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G162800.1

Sequence Viewer

Length: 1887 bp
ATGGACCGGTCGGTACAGGGACACTTGGGGTTCGTAATCAGTCCAAAAAACAAAGTCTTGAAAAGAACCCTTTCCATTCAGTTTCTGCCTCACAGATTATCCTTATTTCTTGAAGGTTCTTCTTCTCTTCTAATCTATCTATTCACTCCTAACCAACATATAAAAAGGCTAGTTATGGCTGGACAGCATCCTGAAGATGGTGATTCGATCGTTTTCCTAAGCACTACACCAGGGGCTTTCAATACGGAAAATGCTAATCCCACATCCCAAAGTGGAGGACTTGGACCAAAGAAAAAATGGGAAACAAAACTTCTTTCAGCTTCACTGTGGAATAAGATAATTGTAATTTCATGTGTTATTGGAGTTTCCCTAGATCCCTTGTTCTTTTACATTCCATTCATCGATAAGGAAAAGAAATGTCTTGGAATGGACAAAAAGTTGAGGAATGTGGCTCTTATTTTGCGATTTCTCACAGACATCACGTTCTTAGTGCATATTGGATATCAAACTTGGGAAGCTGGCAATAAGGCCTATAAGGGAGAAGATTGGCAACAAACGTTGAAATATAATGAGATAATTCCATTTGCTAAGAGGTTTGCTGGGTATTTGTCATGGCTCTCTTTCTTAACTGACCTTCTCGCTGTTCTTCCCGTGCCACAAATTTTAGTAGTAGTGCTTTTCTTCAAAATTAAAGGGCCGGAATATTTGGGACACAGAAAGGTTTTGAACCTTTTTCTACTCAGTCAGTATTTGCCGAGAATTTTTCGAATTATCTTATCGGCCAAGAAACTTACAAAGACTGGAATATGGGTCAAAGCCATATTCAATTTTTTTCTGTACATAATTGCGAGCCATGTACTTGGAGCCTTTTGGTATTTCTTTTCCATTCAACGAGAGACATCATGTTGGCACCGAGCTTGTACAAATACTACAGATTATACAGGATGCATGAGTACCTTTTATTGTGATGATCGCAGTACTACTTTAAGAAATATTACATTTTTCAATGAACATTGTGGTGTAGAATTTCCAGGGGACAAGCAGCCATTTAATTATGGAATATTTCTTGATTCCCTTAAGAATGATGGTAACACGGGGAATATAGATTTTCCAACCAAGTTATGCTTCTCTTTCTGGTGGGGCTTGAGAAATCTAAGCAACTTTGGCACGAATCTCACAACAAGTAATTATGTATGGGAAAACTTCTTTGCAATCCTTATTTCTGTCACTGGTGTGCTACTGTTTGTATATCTCATTGGAAATGTGCAGACATTCATTCAGTTGACAACCACAAAATCGGAGGAAATAAGGCAAAAGATTAAAAAAAGAGAGCAAGTGTGGGGAACATGGATGGAGGAAAATCGTGTTCCTGAAGATTTGAAGAAAGAAATCATGAAAAACATACATAAAAAATTGGGAAAAGACAAAGATGCCAATCTGGAGAATCTATTCAATGTTCTTCCCTGGAATACGAAAAAATTTCTGAAGCGTCGTCTTTTCTTCGATATTCTATCAGAAGTAAAACTCCTTAAGGATATGGATCACAAAGTGCTGAATATGATTTGCGACCATGCGACGCCAGTGACGTTCCCCGAAGATAAAATCATATTTCAAAGTGGGCACCCACTTGATCGCATGCTCTTCATTCTAGAAGGCACCGCCTCCACATCAATTCCCACCAAGCAACTTGTGAGAGGGCAGACTTATGGAGAAGAGCTTCTGATGTGGGCATCGCCCAACTACAAACCTAGGGTTAACAAGCTTCCTACCTCCACCGAAATTGTGAAATCTCGTACAAAACTAGAAGGCTTTGCTCTCTCAGCCACGGACTTGGTAAAAGTAGCCTCCAAATACCGACGCTTGTGGAACTTAAACAATGACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

629

Amino Acids

72.38

Weight (kDa)

9.47

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 909, 1620, 1655
AciI CCGC 1 cut(s) 1659
AclI AACGTT 1 cut(s) 557
AclWI GGATC 2 cut(s) 368, 1548
AcoI YGGCCR 1 cut(s) 780
AcsI RAATTY 4 cut(s) 660, 759, 1025, 1478
AcuI CTGAAG 3 cut(s) 213, 1392, 1505
AcyI GRCGYC 1 cut(s) 1577
AdeI CACNNNGTG 1 cut(s) 1549
AfaI GTAC 7 cut(s) 15, 839, 858, 922, 955, 979, 1795
AfiI CCNNNNNNNGG 1 cut(s) 197
AflII CTTAAG 2 cut(s) 1076, 1529
AgeI ACCGGT 1 cut(s) 6
AjnI CCWGG 3 cut(s) 229, 1030, 1463
AjuI GAANNNNNNNTTGG 2 cut(s) 1109, 1141
AleI CACNNNNGTG 1 cut(s) 1232
AluBI AGCT 5 cut(s) 320, 518, 917, 1717, 1762
AluI AGCT 5 cut(s) 320, 518, 917, 1717, 1762
Alw26I GTCTC 1 cut(s) 890
AlwI GGATC 2 cut(s) 368, 1548
AlwNI CAGNNNCTG 1 cut(s) 85
AoxI GGCC 3 cut(s) 528, 695, 780
ApeKI GCWGC 1 cut(s) 1042
ApoI RAATTY 4 cut(s) 660, 759, 1025, 1478
AsiGI ACCGGT 1 cut(s) 6
Asp700I GAANNNNTTC 3 cut(s) 70, 1448, 1716
AspA2I CCTAGG 1 cut(s) 1748
AspS9I GGNCC 3 cut(s) 4, 284, 695
AsuHPI GGTGA 1 cut(s) 212
AsuII TTCGAA 1 cut(s) 766
AvaII GGWCC 2 cut(s) 4, 284
AvrII CCTAGG 1 cut(s) 1748
BaeGI GKGCMC 1 cut(s) 1623
BanI GGYRCC 3 cut(s) 909, 1620, 1655
BbvI GCAGC 1 cut(s) 1054
BccI CCATC 3 cut(s) 191, 1079, 1345
BciT130I CCWGG 3 cut(s) 231, 1032, 1465
BcoDI GTCTC 1 cut(s) 890
BfaI CTAG 5 cut(s) 170, 371, 1649, 1749, 1802
BfmI CTRYAG 1 cut(s) 930
BfrI CTTAAG 2 cut(s) 1076, 1529
BisI GCNGC 1 cut(s) 1043
BlnI CCTAGG 1 cut(s) 1748
BlsI GCNGC 1 cut(s) 1044
BmcAI AGTACT 1 cut(s) 979
Bme1390I CCNGG 3 cut(s) 231, 1032, 1465
Bme18I GGWCC 2 cut(s) 4, 284
BmgT120I GGNCC 3 cut(s) 4, 284, 695
BmiI GGNNCC 4 cut(s) 865, 911, 1622, 1657
BmrFI CCNGG 3 cut(s) 231, 1032, 1465
BmsI GCATC 4 cut(s) 196, 935, 1420, 1739
BpmI CTGGAG 1 cut(s) 1460
Bpu10I CCTNAGC 1 cut(s) 218
Bpu14I TTCGAA 1 cut(s) 766
BpuEI CTTGAG 1 cut(s) 1165
Bsa29I ATCGAT 1 cut(s) 402
BsaBI GATNNNNATC 2 cut(s) 1434, 1539
BsaHI GRCGYC 1 cut(s) 1577
BsaJI CCNNGG 5 cut(s) 230, 1031, 1463, 1748, 1824
BsaWI WCCGGW 1 cut(s) 6
Bsc4I CCNNNNNNNGG 1 cut(s) 197
Bse118I RCCGGY 1 cut(s) 6
Bse1I ACTGG 3 cut(s) 805, 1234, 1580
Bse8I GATNNNNATC 2 cut(s) 1434, 1539
BseBI CCWGG 3 cut(s) 231, 1032, 1465
BseCI ATCGAT 1 cut(s) 402
BseDI CCNNGG 5 cut(s) 230, 1031, 1463, 1748, 1824
BseGI GGATG 4 cut(s) 187, 263, 950, 1356
BseJI GATNNNNATC 2 cut(s) 1434, 1539
BseLI CCNNNNNNNGG 1 cut(s) 197
BseMII CTCAG 2 cut(s) 754, 1833
BseNI ACTGG 3 cut(s) 805, 1234, 1580
BseSI GKGCMC 1 cut(s) 1623
BseXI GCAGC 1 cut(s) 1054
BseYI CCCAGC 1 cut(s) 599
BsgI GTGCAG 1 cut(s) 1286
Bsh1285I CGRYCG 2 cut(s) 11, 210
BshFI GGCC 3 cut(s) 530, 697, 782
BshNI GGYRCC 3 cut(s) 909, 1620, 1655
BshTI ACCGGT 1 cut(s) 6
BshVI ATCGAT 1 cut(s) 402
BsiEI CGRYCG 2 cut(s) 11, 210
BsiSI CCGG 2 cut(s) 7, 698
BslFI GGGAC 3 cut(s) 33, 723, 1049
BslI CCNNNNNNNGG 1 cut(s) 197
BsmAI GTCTC 1 cut(s) 890
BsmFI GGGAC 3 cut(s) 33, 723, 1049
BsnI GGCC 3 cut(s) 530, 697, 782
Bsp119I TTCGAA 1 cut(s) 766
Bsp1286I GDGCHC 1 cut(s) 1623
Bsp1407I TGTACA 2 cut(s) 837, 920
Bsp143I GATC 5 cut(s) 207, 373, 970, 1540, 1630
BspACI CCGC 1 cut(s) 1659
BspANI GGCC 3 cut(s) 530, 697, 782
BspCNI CTCAG 2 cut(s) 753, 1832
BspDI ATCGAT 1 cut(s) 402
BspHI TCATGA 1 cut(s) 1392
BspLI GGNNCC 4 cut(s) 865, 911, 1622, 1657
BspPI GGATC 2 cut(s) 368, 1548
BspQI GCTCTTC 2 cut(s) 1646, 1707
BspT104I TTCGAA 1 cut(s) 766
BspT107I GGYRCC 3 cut(s) 909, 1620, 1655
BspTI CTTAAG 2 cut(s) 1076, 1529
BsrFI RCCGGY 1 cut(s) 6
BsrGI TGTACA 2 cut(s) 837, 920
BsrI ACTGG 3 cut(s) 805, 1234, 1580
BssAI RCCGGY 1 cut(s) 6
BssECI CCNNGG 5 cut(s) 230, 1031, 1463, 1748, 1824
BssMI GATC 5 cut(s) 207, 373, 970, 1540, 1630
BssNI GRCGYC 1 cut(s) 1577
BssT1I CCWWGG 1 cut(s) 1748
Bst2UI CCWGG 3 cut(s) 231, 1032, 1465
Bst4CI ACNGT 2 cut(s) 327, 1242
Bst6I CTCTTC 3 cut(s) 132, 1646, 1707
BstACI GRCGYC 1 cut(s) 1577
BstAFI CTTAAG 2 cut(s) 1076, 1529
BstAUI TGTACA 2 cut(s) 837, 920
BstBI TTCGAA 1 cut(s) 766
BstC8I GCNNGC 3 cut(s) 520, 850, 1637
BstDEI CTNAG 6 cut(s) 218, 487, 588, 740, 1154, 1819
BstDSI CCRYGG 1 cut(s) 1824
BstF5I GGATG 4 cut(s) 187, 263, 950, 1356
BstKTI GATC 5 cut(s) 210, 376, 973, 1543, 1633
BstMAI GTCTC 1 cut(s) 890
BstMBI GATC 5 cut(s) 207, 373, 970, 1540, 1630
BstMCI CGRYCG 2 cut(s) 11, 210
BstMWI GCNNNNNNNGC 2 cut(s) 1164, 1820
BstNI CCWGG 3 cut(s) 231, 1032, 1465
BstNSI RCATGY 1 cut(s) 1639
BstSCI CCNGG 3 cut(s) 229, 1030, 1463
BstSFI CTRYAG 1 cut(s) 930
BstSLI GKGCMC 1 cut(s) 1623
BstV1I GCAGC 1 cut(s) 1054
BstX2I RGATCY 1 cut(s) 373
BstXI CCANNNNNNTGG 2 cut(s) 860, 1831
BstYI RGATCY 1 cut(s) 373
Bsu15I ATCGAT 1 cut(s) 402
BsuRI GGCC 3 cut(s) 530, 697, 782
BsuTUI ATCGAT 1 cut(s) 402
BtgI CCRYGG 1 cut(s) 1824
BtgZI GCGATG 1 cut(s) 1716
BtsCI GGATG 4 cut(s) 187, 263, 950, 1356
BtsIMutI CAGTG 3 cut(s) 323, 1227, 1587
Cac8I GCNNGC 3 cut(s) 520, 850, 1637
CaiI CAGNNNCTG 1 cut(s) 85
CciI TCATGA 1 cut(s) 1392
Cfr10I RCCGGY 1 cut(s) 6
Cfr13I GGNCC 3 cut(s) 4, 284, 695
ClaI ATCGAT 1 cut(s) 402
CseI GACGC 3 cut(s) 1478, 1585, 1866
Csp6I GTAC 7 cut(s) 14, 838, 857, 921, 954, 978, 1794
CspAI ACCGGT 1 cut(s) 6
CspCI CAANNNNNGTGG 2 cut(s) 1762, 1797
CviAII CATG 9 cut(s) 351, 612, 854, 903, 949, 1347, 1393, 1571, 1636
CviQI GTAC 7 cut(s) 14, 838, 857, 921, 954, 978, 1794
DdeI CTNAG 6 cut(s) 218, 487, 588, 740, 1154, 1819
DpnI GATC 5 cut(s) 209, 375, 972, 1542, 1632
DpnII GATC 5 cut(s) 207, 373, 970, 1540, 1630
DraIII CACNNNGTG 1 cut(s) 1549
EaeI YGGCCR 1 cut(s) 780
Eam1104I CTCTTC 3 cut(s) 132, 1646, 1707
EarI CTCTTC 3 cut(s) 132, 1646, 1707
Eco130I CCWWGG 1 cut(s) 1748
Eco147I AGGCCT 1 cut(s) 530
Eco32I GATATC 1 cut(s) 503
Eco47I GGWCC 2 cut(s) 4, 284
Eco57I CTGAAG 3 cut(s) 213, 1392, 1505
EcoRII CCWGG 3 cut(s) 229, 1030, 1463
EcoRV GATATC 1 cut(s) 503
EcoT14I CCWWGG 1 cut(s) 1748
EcoT22I ATGCAT 1 cut(s) 950
ErhI CCWWGG 1 cut(s) 1748
FaeI CATG 9 cut(s) 354, 615, 857, 906, 952, 1350, 1396, 1574, 1639
FalI AAGNNNNNCTT 2 cut(s) 1109, 1141
FaqI GGGAC 3 cut(s) 33, 723, 1049
FatI CATG 9 cut(s) 350, 611, 853, 902, 948, 1346, 1392, 1570, 1635
Fnu4HI GCNGC 1 cut(s) 1043
FokI GGATG 4 cut(s) 174, 250, 957, 1363
Fsp4HI GCNGC 1 cut(s) 1043
FspBI CTAG 5 cut(s) 170, 371, 1649, 1749, 1802
GluI GCNGC 1 cut(s) 1043
GsaI CCCAGC 1 cut(s) 603
GsuI CTGGAG 1 cut(s) 1460
HaeIII GGCC 3 cut(s) 530, 697, 782
HapII CCGG 2 cut(s) 7, 698
HgaI GACGC 3 cut(s) 1478, 1585, 1866
Hin1I GRCGYC 1 cut(s) 1577
Hin1II CATG 9 cut(s) 354, 615, 857, 906, 952, 1350, 1396, 1574, 1639
HincII GTYRAC 2 cut(s) 1284, 1756
HindII GTYRAC 2 cut(s) 1284, 1756
HindIII AAGCTT 1 cut(s) 1760
HinfI GANTC 4 cut(s) 203, 1070, 1171, 1444
HpaI GTTAAC 1 cut(s) 1756
HpaII CCGG 2 cut(s) 7, 698
HphI GGTGA 1 cut(s) 212
Hpy166II GTNNAC 2 cut(s) 1284, 1756
Hpy188I TCNGA 4 cut(s) 1300, 1485, 1516, 1722
Hpy188III TCNNGA 8 cut(s) 58, 110, 191, 1067, 1370, 1393, 1439, 1649
Hpy8I GTNNAC 2 cut(s) 1284, 1756
Hpy99I CGWCG 3 cut(s) 1494, 1579, 1860
HpyAV CCTTC 4 cut(s) 107, 644, 1646, 1799
HpyCH4III ACNGT 2 cut(s) 327, 1242
HpyCH4IV ACGT 3 cut(s) 482, 557, 1586
HpyCH4V TGCA 4 cut(s) 493, 948, 1211, 1267
HpyF10VI GCNNNNNNNGC 2 cut(s) 1164, 1820
HpyF3I CTNAG 6 cut(s) 218, 487, 588, 740, 1154, 1819
HpySE526I ACGT 3 cut(s) 482, 557, 1586
Hsp92I GRCGYC 1 cut(s) 1577
Hsp92II CATG 9 cut(s) 354, 615, 857, 906, 952, 1350, 1396, 1574, 1639
KspAI GTTAAC 1 cut(s) 1756
Kzo9I GATC 5 cut(s) 207, 373, 970, 1540, 1630
LguI GCTCTTC 2 cut(s) 1646, 1707
LmnI GCTCC 1 cut(s) 863
Lsp1109I GCAGC 1 cut(s) 1054
LweI GCATC 4 cut(s) 196, 935, 1420, 1739
MaeI CTAG 5 cut(s) 170, 371, 1649, 1749, 1802
MaeII ACGT 3 cut(s) 482, 557, 1586
MaeIII GTNAC 3 cut(s) 1088, 1225, 1582
MalI GATC 5 cut(s) 209, 375, 972, 1542, 1632
MboI GATC 5 cut(s) 207, 373, 970, 1540, 1630
MflI RGATCY 1 cut(s) 373
MhlI GDGCHC 1 cut(s) 1623
MmeI TCCRAC 1 cut(s) 1136
Mph1103I ATGCAT 1 cut(s) 950
MroXI GAANNNNTTC 3 cut(s) 70, 1448, 1716
MseI TTAA 9 cut(s) 626, 690, 986, 1050, 1077, 1320, 1530, 1755, 1871
MslI CAYNNNNRTG 2 cut(s) 1017, 1232
MspCI CTTAAG 2 cut(s) 1076, 1529
MspI CCGG 2 cut(s) 7, 698
MspR9I CCNGG 3 cut(s) 231, 1032, 1465
MvaI CCWGG 3 cut(s) 231, 1032, 1465
MwoI GCNNNNNNNGC 2 cut(s) 1164, 1820
NdeII GATC 5 cut(s) 207, 373, 970, 1540, 1630
NlaIII CATG 9 cut(s) 354, 615, 857, 906, 952, 1350, 1396, 1574, 1639
NlaIV GGNNCC 4 cut(s) 865, 911, 1622, 1657
NmeAIII GCCGAG 1 cut(s) 780
NmuCI GTSAC 2 cut(s) 1225, 1582
NsiI ATGCAT 1 cut(s) 950
NspI RCATGY 1 cut(s) 1639
NspV TTCGAA 1 cut(s) 766
OliI CACNNNNGTG 1 cut(s) 1232
PaeI GCATGC 1 cut(s) 1639
PagI TCATGA 1 cut(s) 1392
PceI AGGCCT 1 cut(s) 530
PciSI GCTCTTC 2 cut(s) 1646, 1707
PcsI WCGNNNNNNNCGW 1 cut(s) 1583
PdmI GAANNNNTTC 3 cut(s) 70, 1448, 1716
PfeI GAWTC 4 cut(s) 203, 1070, 1171, 1444
PinAI ACCGGT 1 cut(s) 6
PkrI GCNGC 1 cut(s) 1044
Ple19I CGATCG 1 cut(s) 210
Psp1406I AACGTT 1 cut(s) 557
Psp6I CCWGG 3 cut(s) 229, 1030, 1463
PspFI CCCAGC 1 cut(s) 599
PspGI CCWGG 3 cut(s) 229, 1030, 1463
PspN4I GGNNCC 4 cut(s) 865, 911, 1622, 1657
PspPI GGNCC 3 cut(s) 4, 284, 695
PstNI CAGNNNCTG 1 cut(s) 85
PsuI RGATCY 1 cut(s) 373
PvuI CGATCG 1 cut(s) 210
RsaI GTAC 7 cut(s) 15, 839, 858, 922, 955, 979, 1795
RsaNI GTAC 7 cut(s) 14, 838, 857, 921, 954, 978, 1794
RseI CAYNNNNRTG 2 cut(s) 1017, 1232
SapI GCTCTTC 2 cut(s) 1646, 1707
SaqAI TTAA 9 cut(s) 626, 690, 986, 1050, 1077, 1320, 1530, 1755, 1871
SatI GCNGC 1 cut(s) 1043
Sau3AI GATC 5 cut(s) 207, 373, 970, 1540, 1630
Sau96I GGNCC 3 cut(s) 4, 284, 695
ScaI AGTACT 1 cut(s) 979
ScrFI CCNGG 3 cut(s) 231, 1032, 1465
SduI GDGCHC 1 cut(s) 1623
SfaNI GCATC 4 cut(s) 196, 935, 1420, 1739
SfcI CTRYAG 1 cut(s) 930
SfuI TTCGAA 1 cut(s) 766
SinI GGWCC 2 cut(s) 4, 284
SmiMI CAYNNNNRTG 2 cut(s) 1017, 1232
SmlI CTYRAG 3 cut(s) 1076, 1144, 1529
SmoI CTYRAG 3 cut(s) 1076, 1144, 1529
SphI GCATGC 1 cut(s) 1639
SseBI AGGCCT 1 cut(s) 530
SsiI CCGC 1 cut(s) 1659
SspI AATATT 3 cut(s) 704, 994, 1062
SspMI CTAG 5 cut(s) 170, 371, 1649, 1749, 1802
StuI AGGCCT 1 cut(s) 530
StyD4I CCNGG 3 cut(s) 229, 1030, 1463
StyI CCWWGG 1 cut(s) 1748
TaaI ACNGT 2 cut(s) 327, 1242
TaiI ACGT 3 cut(s) 485, 560, 1589
TaqI TCGA 4 cut(s) 206, 402, 766, 1503
TatI WGTACW 4 cut(s) 837, 856, 920, 977
TfiI GAWTC 4 cut(s) 203, 1070, 1171, 1444
Tru1I TTAA 9 cut(s) 626, 690, 986, 1050, 1077, 1320, 1530, 1755, 1871
Tru9I TTAA 9 cut(s) 626, 690, 986, 1050, 1077, 1320, 1530, 1755, 1871
TscAI CASTG 3 cut(s) 330, 1234, 1587
TseFI GTSAC 2 cut(s) 1225, 1582
TseI GCWGC 1 cut(s) 1042
Tsp45I GTSAC 2 cut(s) 1225, 1582
TspDTI ATGAA 6 cut(s) 339, 388, 1023, 1264, 1409, 1633
TspGWI ACGGA 2 cut(s) 260, 1841
TspRI CASTG 3 cut(s) 330, 1234, 1587
Vha464I CTTAAG 2 cut(s) 1076, 1529
VpaK11BI GGWCC 2 cut(s) 4, 284
XapI RAATTY 4 cut(s) 660, 759, 1025, 1478
XbaI TCTAGA 1 cut(s) 1648
XceI RCATGY 1 cut(s) 1639
XcmI CCANNNNNNNNNTGG 1 cut(s) 294
XmaJI CCTAGG 1 cut(s) 1748
XmnI GAANNNNTTC 3 cut(s) 70, 1448, 1716
XspI CTAG 5 cut(s) 170, 371, 1649, 1749, 1802
ZrmI AGTACT 1 cut(s) 979
Zsp2I ATGCAT 1 cut(s) 950
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.