Rmu_sc0005842.1_g000004

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005842.1
OG0000119
Physical Location & Seq
Reverse (-)
13152 .. 16298
3147 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005842.1_g000004.1.cds

Sequence Viewer

Length: 1284 bp
atgtcgatagctctcactttgcgatcgctcactgatgtcactttcgtagtgaatatcatatatcatgtttgcaaagccattaacgctgcctgcaaagaacacaaaggaaaaaagtctgaactggcatcggattgggaattttcgaaggtatcagcagcggagataattccatttgctaaattagttgctgggaagctagcatggcgctctacgctaaccagcattttagctgtttttcccatgccacaagcatgtgtaaacaatagtacaaatgttgaaggatgtatcagaaccctattctgcgaggttcacaatcacgatagtactgctgcacgaaatgccacattccttaatcaattctgccctataagtgctgaagaaaatgctaaggcccatattgattttggaatatttctggattcccacaaaaatggtatcacaggggatatagatttcggaacaaagttatcttactctttttggtggggattacgtaatctaagtaattttggtacaaatctcgaaacaagcgcctatgtgtgggaaaattgctttgcaatttttatttctgtcattggcttgttactatttctatatctcattggaaatgtacagagatttatgtccatggaagctgaaaaacgggaggatataagaaacaagatacaattgaaaaaggaagatataagaggatggatggacagaaatcatctcccagaccatttgaagaaagaaattatggagaacattgagcaaaaactgaaaaagaacaaagatactgatcttgagaatcttttctttactattccgatgaaaagtcttaggcctttccgcggcatggacctgctaaagacagtaccgaagcttgcaaggatggatgatagagtgttgaaaatgatgtgtgaccgtctaaagccagtcaagtataagaacggcgacggggttttccaaattggagttcaactagatagaatgctactcattacagaaggcacattaaagacctacggagattgtcatgctgcaactgaaaacgcagaaacgagtagtaattcaggttgccaccaccgtaacaaaggtgactgttacggcgccgaagaactgatcgagtgggtatcacaaaataaggatttagaccagcttcccgcctctttcttcaatgtgaaatgcactttgaaagtggaaggctttgaactgatggccaaggacttgagcaatgtagtttccgaaaacgaaaaccggttcaaaattggcattagcgagtcagacgacagcatagtctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

427

Amino Acids

48.38

Weight (kDa)

6.61

Isoelectric Point (pI)

35.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1277
Acc36I ACCTGC 1 cut(s) 852
AccB1I GGYRCC 1 cut(s) 1091
AccII CGCG 1 cut(s) 834
AciI CCGC 4 cut(s) 158, 832, 834, 1146
AcoI YGGCCR 1 cut(s) 1200
AcsI RAATTY 1 cut(s) 137
AcuI CTGAAG 1 cut(s) 396
AcyI GRCGYC 1 cut(s) 1092
AfaI GTAC 5 cut(s) 268, 325, 514, 612, 858
AfiI CCNNNNNNNGG 3 cut(s) 540, 833, 838
AgeI ACCGGT 1 cut(s) 1239
AgsI TTSAA 9 cut(s) 278, 673, 727, 892, 962, 1159, 1177, 1193, 1246
AjuI GAANNNNNNNTTGG 2 cut(s) 942, 974
AluBI AGCT 6 cut(s) 11, 196, 230, 635, 865, 1141
AluI AGCT 6 cut(s) 11, 196, 230, 635, 865, 1141
AoxI GGCC 3 cut(s) 390, 824, 1200
ApeKI GCWGC 4 cut(s) 86, 155, 329, 1022
ApoI RAATTY 1 cut(s) 137
AsiGI ACCGGT 1 cut(s) 1239
AsiSI GCGATCGC 1 cut(s) 26
Asp700I GAANNNNTTC 1 cut(s) 794
AspLEI GCGC 3 cut(s) 207, 533, 1094
AspS9I GGNCC 2 cut(s) 391, 841
AsuHPI GGTGA 1 cut(s) 1091
AsuII TTCGAA 1 cut(s) 143
AsuNHI GCTAGC 1 cut(s) 196
AvaII GGWCC 1 cut(s) 841
BalI TGGCCA 1 cut(s) 1202
BanI GGYRCC 1 cut(s) 1091
BbvI GCAGC 4 cut(s) 73, 167, 316, 1009
BccI CCATC 4 cut(s) 687, 691, 868, 1192
BceAI ACGGC 2 cut(s) 949, 1105
BcgI CGANNNNNNTGC 2 cut(s) 308, 342
BfaI CTAG 3 cut(s) 197, 965, 1282
BfoI RGCGCY 3 cut(s) 208, 534, 1095
BfuAI ACCTGC 1 cut(s) 852
BisI GCNGC 5 cut(s) 87, 156, 330, 835, 1023
BlsI GCNGC 5 cut(s) 88, 157, 331, 836, 1024
BmcAI AGTACT 1 cut(s) 325
Bme18I GGWCC 1 cut(s) 841
BmgT120I GGNCC 2 cut(s) 391, 841
BmiI GGNNCC 1 cut(s) 1093
BmsI GCATC 1 cut(s) 134
BmtI GCTAGC 1 cut(s) 200
Bpu10I CCTNAGC 1 cut(s) 387
Bpu14I TTCGAA 1 cut(s) 143
BpuEI CTTGAG 2 cut(s) 806, 1231
BsaAI YACGTR 1 cut(s) 494
BsaBI GATNNNNATC 1 cut(s) 780
BsaHI GRCGYC 1 cut(s) 1092
BsaJI CCNNGG 3 cut(s) 627, 832, 1203
BsaWI WCCGGW 1 cut(s) 1239
Bsc4I CCNNNNNNNGG 3 cut(s) 540, 833, 838
Bse118I RCCGGY 1 cut(s) 1239
Bse1I ACTGG 2 cut(s) 126, 917
Bse3DI GCAATG 1 cut(s) 1222
Bse8I GATNNNNATC 1 cut(s) 780
BseDI CCNNGG 3 cut(s) 627, 832, 1203
BseGI GGATG 5 cut(s) 287, 698, 702, 879, 883
BseJI GATNNNNATC 1 cut(s) 780
BseLI CCNNNNNNNGG 3 cut(s) 540, 833, 838
BseMI GCAATG 1 cut(s) 1222
BseNI ACTGG 2 cut(s) 126, 917
BseXI GCAGC 4 cut(s) 73, 167, 316, 1009
BseYI CCCAGC 1 cut(s) 188
BsgI GTGCAG 1 cut(s) 315
Bsh1236I CGCG 1 cut(s) 834
Bsh1285I CGRYCG 1 cut(s) 26
BshFI GGCC 3 cut(s) 392, 826, 1202
BshNI GGYRCC 1 cut(s) 1091
BshTI ACCGGT 1 cut(s) 1239
BsiEI CGRYCG 1 cut(s) 26
BsiSI CCGG 1 cut(s) 1240
BslI CCNNNNNNNGG 3 cut(s) 540, 833, 838
BsmI GAATGC 1 cut(s) 978
BsnI GGCC 3 cut(s) 392, 826, 1202
Bsp119I TTCGAA 1 cut(s) 143
Bsp1407I TGTACA 1 cut(s) 610
Bsp143I GATC 3 cut(s) 23, 781, 1104
Bsp19I CCATGG 1 cut(s) 627
BspACI CCGC 4 cut(s) 158, 832, 834, 1146
BspANI GGCC 3 cut(s) 392, 826, 1202
BspFNI CGCG 1 cut(s) 834
BspLI GGNNCC 1 cut(s) 1093
BspMI ACCTGC 1 cut(s) 852
BspOI GCTAGC 1 cut(s) 200
BspT104I TTCGAA 1 cut(s) 143
BspT107I GGYRCC 1 cut(s) 1091
BsrDI GCAATG 1 cut(s) 1222
BsrFI RCCGGY 1 cut(s) 1239
BsrGI TGTACA 1 cut(s) 610
BsrI ACTGG 2 cut(s) 126, 917
BssAI RCCGGY 1 cut(s) 1239
BssECI CCNNGG 3 cut(s) 627, 832, 1203
BssMI GATC 3 cut(s) 23, 781, 1104
BssNI GRCGYC 1 cut(s) 1092
BssT1I CCWWGG 2 cut(s) 627, 1203
Bst4CI ACNGT 4 cut(s) 856, 908, 1070, 1085
BstACI GRCGYC 1 cut(s) 1092
BstAPI GCANNNNNTGC 1 cut(s) 338
BstAUI TGTACA 1 cut(s) 610
BstBAI YACGTR 1 cut(s) 494
BstBI TTCGAA 1 cut(s) 143
BstC8I GCNNGC 3 cut(s) 91, 198, 867
BstDEI CTNAG 3 cut(s) 387, 500, 821
BstDSI CCRYGG 2 cut(s) 627, 832
BstF5I GGATG 5 cut(s) 287, 698, 702, 879, 883
BstFNI CGCG 1 cut(s) 834
BstH2I RGCGCY 3 cut(s) 208, 534, 1095
BstHHI GCGC 3 cut(s) 207, 533, 1094
BstKTI GATC 3 cut(s) 26, 784, 1107
BstMBI GATC 3 cut(s) 23, 781, 1104
BstMCI CGRYCG 1 cut(s) 26
BstMWI GCNNNNNNNGC 4 cut(s) 83, 202, 211, 338
BstNSI RCATGY 1 cut(s) 255
BstSNI TACGTA 1 cut(s) 494
BstUI CGCG 1 cut(s) 834
BstV1I GCAGC 4 cut(s) 73, 167, 316, 1009
BstXI CCANNNNNNTGG 1 cut(s) 431
BsuRI GGCC 3 cut(s) 392, 826, 1202
BtgI CCRYGG 2 cut(s) 627, 832
BtsCI GGATG 5 cut(s) 287, 698, 702, 879, 883
BtsIMutI CAGTG 1 cut(s) 30
BveI ACCTGC 1 cut(s) 852
Cac8I GCNNGC 3 cut(s) 91, 198, 867
CfoI GCGC 3 cut(s) 207, 533, 1094
Cfr10I RCCGGY 1 cut(s) 1239
Cfr13I GGNCC 2 cut(s) 391, 841
Cfr42I CCGCGG 1 cut(s) 835
Csp6I GTAC 5 cut(s) 267, 324, 513, 611, 857
CspAI ACCGGT 1 cut(s) 1239
CviAII CATG 7 cut(s) 65, 201, 241, 252, 628, 838, 1019
CviQI GTAC 5 cut(s) 267, 324, 513, 611, 857
DdeI CTNAG 3 cut(s) 387, 500, 821
DinI GGCGCC 1 cut(s) 1093
DpnI GATC 3 cut(s) 25, 783, 1106
DpnII GATC 3 cut(s) 23, 781, 1104
DrdI GACNNNNNNGTC 1 cut(s) 1277
DseDI GACNNNNNNGTC 1 cut(s) 1277
EaeI YGGCCR 1 cut(s) 1200
Eco105I TACGTA 1 cut(s) 494
Eco130I CCWWGG 2 cut(s) 627, 1203
Eco147I AGGCCT 1 cut(s) 826
Eco47I GGWCC 1 cut(s) 841
Eco57I CTGAAG 1 cut(s) 396
EcoT14I CCWWGG 2 cut(s) 627, 1203
EgeI GGCGCC 1 cut(s) 1093
EheI GGCGCC 1 cut(s) 1093
ErhI CCWWGG 2 cut(s) 627, 1203
FaeI CATG 7 cut(s) 68, 204, 244, 255, 631, 841, 1022
FatI CATG 7 cut(s) 64, 200, 240, 251, 627, 837, 1018
FauI CCCGC 1 cut(s) 1153
Fnu4HI GCNGC 5 cut(s) 87, 156, 330, 835, 1023
FokI GGATG 5 cut(s) 294, 705, 709, 886, 890
Fsp4HI GCNGC 5 cut(s) 87, 156, 330, 835, 1023
FspBI CTAG 3 cut(s) 197, 965, 1282
GlaI GCGC 3 cut(s) 206, 532, 1093
GluI GCNGC 5 cut(s) 87, 156, 330, 835, 1023
GsaI CCCAGC 1 cut(s) 192
HaeII RGCGCY 3 cut(s) 208, 534, 1095
HaeIII GGCC 3 cut(s) 392, 826, 1202
HapII CCGG 1 cut(s) 1240
HhaI GCGC 3 cut(s) 207, 533, 1094
Hin1I GRCGYC 1 cut(s) 1092
Hin1II CATG 7 cut(s) 68, 204, 244, 255, 631, 841, 1022
Hin6I GCGC 3 cut(s) 205, 531, 1092
HinP1I GCGC 3 cut(s) 205, 531, 1092
HindIII AAGCTT 1 cut(s) 863
HinfI GANTC 3 cut(s) 419, 790, 1262
HpaII CCGG 1 cut(s) 1240
HphI GGTGA 1 cut(s) 1091
Hpy166II GTNNAC 2 cut(s) 259, 310
Hpy188I TCNGA 7 cut(s) 118, 130, 290, 458, 810, 1228, 1267
Hpy188III TCNNGA 4 cut(s) 317, 416, 521, 785
Hpy8I GTNNAC 2 cut(s) 259, 310
Hpy99I CGWCG 1 cut(s) 941
HpyAV CCTTC 4 cut(s) 139, 272, 983, 1178
HpyCH4III ACNGT 4 cut(s) 856, 908, 1070, 1085
HpyCH4IV ACGT 1 cut(s) 493
HpyCH4V TGCA 7 cut(s) 72, 93, 332, 557, 869, 1025, 1170
HpyF10VI GCNNNNNNNGC 4 cut(s) 83, 202, 211, 338
HpyF3I CTNAG 3 cut(s) 387, 500, 821
HpySE526I ACGT 1 cut(s) 493
Hsp92I GRCGYC 1 cut(s) 1092
Hsp92II CATG 7 cut(s) 68, 204, 244, 255, 631, 841, 1022
HspAI GCGC 3 cut(s) 205, 531, 1092
KasI GGCGCC 1 cut(s) 1091
KspI CCGCGG 1 cut(s) 835
Kzo9I GATC 3 cut(s) 23, 781, 1104
Lsp1109I GCAGC 4 cut(s) 73, 167, 316, 1009
LweI GCATC 1 cut(s) 134
MaeI CTAG 3 cut(s) 197, 965, 1282
MaeII ACGT 1 cut(s) 493
MaeIII GTNAC 6 cut(s) 37, 582, 902, 1070, 1079, 1085
MalI GATC 3 cut(s) 25, 783, 1106
MboI GATC 3 cut(s) 23, 781, 1104
MboII GAAGA 5 cut(s) 389, 692, 739, 1109, 1147
MfeI CAATTG 1 cut(s) 668
MlsI TGGCCA 1 cut(s) 1202
MluNI TGGCCA 1 cut(s) 1202
Mly113I GGCGCC 1 cut(s) 1092
MlyI GAGTC 1 cut(s) 1271
MnlI CCTC 4 cut(s) 298, 640, 683, 1159
Mox20I TGGCCA 1 cut(s) 1202
MroXI GAANNNNTTC 1 cut(s) 794
MscI TGGCCA 1 cut(s) 1202
MseI TTAA 3 cut(s) 81, 351, 998
MslI CAYNNNNRTG 2 cut(s) 250, 429
Msp20I TGGCCA 1 cut(s) 1202
MspA1I CMGCKG 2 cut(s) 158, 834
MspI CCGG 1 cut(s) 1240
MunI CAATTG 1 cut(s) 668
Mva1269I GAATGC 1 cut(s) 978
MvnI CGCG 1 cut(s) 834
MwoI GCNNNNNNNGC 4 cut(s) 83, 202, 211, 338
NarI GGCGCC 1 cut(s) 1092
NcoI CCATGG 1 cut(s) 627
NdeII GATC 3 cut(s) 23, 781, 1104
NheI GCTAGC 1 cut(s) 196
NlaIII CATG 7 cut(s) 68, 204, 244, 255, 631, 841, 1022
NlaIV GGNNCC 1 cut(s) 1093
NmuCI GTSAC 3 cut(s) 37, 902, 1079
NspI RCATGY 1 cut(s) 255
NspV TTCGAA 1 cut(s) 143
PceI AGGCCT 1 cut(s) 826
PctI GAATGC 1 cut(s) 978
PdmI GAANNNNTTC 1 cut(s) 794
PfeI GAWTC 2 cut(s) 419, 790
PinAI ACCGGT 1 cut(s) 1239
PkrI GCNGC 5 cut(s) 88, 157, 331, 836, 1024
Ple19I CGATCG 1 cut(s) 26
PleI GAGTC 1 cut(s) 1270
PluTI GGCGCC 1 cut(s) 1095
PpsI GAGTC 1 cut(s) 1270
Ppu21I YACGTR 1 cut(s) 494
PspFI CCCAGC 1 cut(s) 188
PspN4I GGNNCC 1 cut(s) 1093
PspPI GGNCC 2 cut(s) 391, 841
PvuI CGATCG 1 cut(s) 26
RgaI GCGATCGC 1 cut(s) 26
RsaI GTAC 5 cut(s) 268, 325, 514, 612, 858
RsaNI GTAC 5 cut(s) 267, 324, 513, 611, 857
RseI CAYNNNNRTG 2 cut(s) 250, 429
SacII CCGCGG 1 cut(s) 835
SaqAI TTAA 3 cut(s) 81, 351, 998
SatI GCNGC 5 cut(s) 87, 156, 330, 835, 1023
Sau3AI GATC 3 cut(s) 23, 781, 1104
Sau96I GGNCC 2 cut(s) 391, 841
ScaI AGTACT 1 cut(s) 325
SchI GAGTC 1 cut(s) 1271
SfaAI GCGATCGC 1 cut(s) 26
SfaNI GCATC 1 cut(s) 134
SfoI GGCGCC 1 cut(s) 1093
Sfr303I CCGCGG 1 cut(s) 835
SfuI TTCGAA 1 cut(s) 143
SgfI GCGATCGC 1 cut(s) 26
SgrBI CCGCGG 1 cut(s) 835
SinI GGWCC 1 cut(s) 841
SmiMI CAYNNNNRTG 2 cut(s) 250, 429
SmlI CTYRAG 2 cut(s) 785, 1210
SmoI CTYRAG 2 cut(s) 785, 1210
SnaBI TACGTA 1 cut(s) 494
SseBI AGGCCT 1 cut(s) 826
SsiI CCGC 4 cut(s) 158, 832, 834, 1146
SspDI GGCGCC 1 cut(s) 1091
SspI AATATT 1 cut(s) 411
SspMI CTAG 3 cut(s) 197, 965, 1282
StuI AGGCCT 1 cut(s) 826
StyI CCWWGG 2 cut(s) 627, 1203
TaaI ACNGT 4 cut(s) 856, 908, 1070, 1085
TaiI ACGT 1 cut(s) 496
TaqI TCGA 4 cut(s) 5, 143, 522, 1107
TatI WGTACW 3 cut(s) 266, 323, 610
TauI GCSGC 1 cut(s) 837
TfiI GAWTC 2 cut(s) 419, 790
Tru1I TTAA 3 cut(s) 81, 351, 998
Tru9I TTAA 3 cut(s) 81, 351, 998
TscAI CASTG 1 cut(s) 37
TseFI GTSAC 3 cut(s) 37, 902, 1079
TseI GCWGC 4 cut(s) 86, 155, 329, 1022
Tsp45I GTSAC 3 cut(s) 37, 902, 1079
TspDTI ATGAA 1 cut(s) 827
TspGWI ACGGA 1 cut(s) 1023
TspRI CASTG 1 cut(s) 37
VpaK11BI GGWCC 1 cut(s) 841
XapI RAATTY 1 cut(s) 137
XceI RCATGY 1 cut(s) 255
XcmI CCANNNNNNNNNTGG 1 cut(s) 401
XmnI GAANNNNTTC 1 cut(s) 794
XspI CTAG 3 cut(s) 197, 965, 1282
ZrmI AGTACT 1 cut(s) 325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.