RLG00000030189

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000119
Physical Location & Seq
Reverse (-)
57276992 .. 57280831
3840 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030189

Sequence Viewer

Length: 1842 bp
ATGTATAAGCAGCGTGTCCCCGTTGAGAACGATGATACCTATATGATGAGCACAACACGAGGTACGAACTATGATTTCGAAAGTGTTGAGGAGCAAGGGCGAGATGGTTCATCGAAAACCGTAGATGCACTTTCAACCAAGAAAAAATTGAAAATTGCACTTCTTTCCGTTTCATTGTGGAACAAGCTATTCCTAATCGCATGTGTGATTGCAATCTCATTAGACCCCTTGTTCTTTTACATTCCAATCATCAATGAAGATGAAAAGTGTCTTGGAATAGACAAAGAGTTGAGGACTATAGCTCTCATTTTGCGATCCCTCAGTGATATCATTTTCATAGTGCATATTGTATATCAAATTTGCGAAGCTGCTATGGCGGCCTACAAAGTACACATAAAAGGAAAGTCGGAATTGGAATTGGATTGGTCATATTCGAAGATATCAAAGGGTGAGATAATTCCATTTGCTAAATTAGTTGCTGGGAAGCTAGCATGGCGCTCCACGCTAACTGATATTTTGGCTGTTCTTCCCATGCCACAATTTCTAGTGGTCTTTGGTTTCTTCAAAATGAGAGGCCGTGGATATTTGGAACGCAAGAAGATTGTCAATGTCTTTCTCCTGGGTCAATATTTGCCAAGGATTTATCGAATTTACTTATCATCTAAGGAACTTAGACAAACTACAGGAATTTGGGTTAAGGCTCTGTTCAACTTTTTTCTATATATACTAGCCAGTCATGTCATTGGAGCTTTTTGGTACTTCTTTTCTATTCAACGTGAGACATCATGCTGGCATCATGCTTGTATAAAGAATAGTACAAATGTCGAAGGATGTATGAGTACTTTCTACTGTGATGGTCGCAATACTACCGCTAGAAATGTCACTTTTTTCAATCAGTTTTGCCACATCAATGTTGAAGACAATGCTACAGCGCTTTTTGATTTTGGAATATTTCTTAATTCTCTCAAGAATGGTAACACGGGCCATATAAATTTTGCAACAAAGTTGTCCTACTCATTTTGGTGGGGATTGCGGAATCTGAGTTTGTGTAGTATATATGTGATATACCTTGTAGCTAAGATAGAATTTCAGACCTTTATGTCCATGGAAGCTCAAAGATGGGAGGTTATAAGAAACAAGATGCTTTTGAAAGAGAAAGATATAGAAAGATGGATGGACAGGAATGAACTGCCCGATGATATGAAGAAAGAAATCAAGAAAAACATTACGCAAAAATTGGAAGAAAACAAAGATTCAGATCTGGAGAACCTTTTCAATATTCTTCCCTGGTACACCAAAAAGTACCTAAAGCGAGTTCTCTGCATGGACATACTAAAGAAAGTACCTAAACTGGAAAGAATGGACGAGAAAGTGTTGAAAATGATCTGCGACTATCTAAAGCCAGAGATGTATGCTGAGGGCACCATGGTTTTTCACATGGGAGAACCGCTTGATAGCATGCTATTCATTACAGAAGGCACTATACTGACCTACAAAACTACCAGTACTGATAGTCAAGCTCATGAAAACGCAAAATTGCGTCATCCTGCATCCCCATCAATCGGCACCCTTGAGAAAGGCTACTTCTATGGCGAACAACTGCTGCACTGGGCATCACAAAAAAACGTGAATTTAACGGAGGTCCCTAGCTCTGCCGACAATGTGAAGTGCCATACAAAAGTAGAAGGCTTTGTTCTCATGGCCAAGGACTTAAGAACTGTAGTCTCCAAATGTGAGTACTGGTGGAAATTAAGCATTAGTAATCCTAGAGTGGGTGGTACTCGGACCACACCAAATGCTAGGAATGTGCAGCAGAAACCTGGAGTGGATCCCCAGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

614

Amino Acids

71.0

Weight (kDa)

8.97

Isoelectric Point (pI)

41.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 59 - 348 1.4e-06 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1130
AasI GACNNNNNNGTC 1 cut(s) 1099
AccB1I GGYRCC 2 cut(s) 1421, 1565
AciI CCGC 4 cut(s) 377, 870, 1033, 1448
AclWI GGATC 3 cut(s) 309, 1823, 1836
AcoI YGGCCR 1 cut(s) 1701
AcsI RAATTY 6 cut(s) 357, 648, 687, 991, 1085, 1630
AfeI AGCGCT 1 cut(s) 933
AfiI CCNNNNNNNGG 2 cut(s) 1562, 1772
AflII CTTAAG 1 cut(s) 1711
AjnI CCWGG 3 cut(s) 618, 1286, 1819
AjuI GAANNNNNNNTTGG 2 cut(s) 255, 287
AluBI AGCT 9 cut(s) 187, 302, 368, 487, 749, 1076, 1112, 1520, 1650
AluI AGCT 9 cut(s) 187, 302, 368, 487, 749, 1076, 1112, 1520, 1650
Alw21I GWGCWC 1 cut(s) 53
Alw26I GTCTC 2 cut(s) 773, 1729
AlwI GGATC 3 cut(s) 309, 1823, 1836
Aor51HI AGCGCT 1 cut(s) 933
AoxI GGCC 4 cut(s) 378, 574, 982, 1701
ApeKI GCWGC 4 cut(s) 10, 368, 1603, 1810
ApoI RAATTY 6 cut(s) 357, 648, 687, 991, 1085, 1630
Asp700I GAANNNNTTC 1 cut(s) 1271
AspLEI GCGC 2 cut(s) 498, 934
AspS9I GGNCC 3 cut(s) 982, 1642, 1785
AsuHPI GGTGA 1 cut(s) 461
AsuII TTCGAA 2 cut(s) 78, 434
AsuNHI GCTAGC 1 cut(s) 487
AvaII GGWCC 2 cut(s) 1642, 1785
BaeGI GKGCMC 1 cut(s) 1424
BalI TGGCCA 1 cut(s) 1703
BamHI GGATCC 1 cut(s) 1828
BanI GGYRCC 2 cut(s) 1421, 1565
BarI GAAGNNNNNNTAC 2 cut(s) 1467, 1499
BauI CACGAG 1 cut(s) 57
BbsI GAAGAC 1 cut(s) 924
Bbv12I GWGCWC 1 cut(s) 53
BbvCI CCTCAGC 1 cut(s) 1416
BbvI GCAGC 4 cut(s) 22, 355, 1590, 1822
BccI CCATC 6 cut(s) 98, 848, 1113, 1164, 1168, 1564
BceAI ACGGC 1 cut(s) 561
BcgI CGANNNNNNTGC 2 cut(s) 1302, 1336
BciT130I CCWGG 3 cut(s) 620, 1288, 1821
BcoDI GTCTC 2 cut(s) 773, 1729
BfaI CTAG 8 cut(s) 488, 545, 728, 873, 1647, 1767, 1800, 1840
BfmI CTRYAG 4 cut(s) 297, 681, 927, 1719
BfoI RGCGCY 2 cut(s) 499, 935
BfrI CTTAAG 1 cut(s) 1711
BglII AGATCT 1 cut(s) 1258
BisI GCNGC 5 cut(s) 11, 369, 378, 1604, 1811
BlsI GCNGC 5 cut(s) 12, 370, 379, 1605, 1812
BmcAI AGTACT 4 cut(s) 841, 1507, 1739, 1838
Bme1390I CCNGG 3 cut(s) 620, 1288, 1821
Bme18I GGWCC 2 cut(s) 1642, 1785
BmgT120I GGNCC 3 cut(s) 982, 1642, 1785
BmiI GGNNCC 4 cut(s) 1423, 1567, 1644, 1830
BmrFI CCNGG 3 cut(s) 620, 1288, 1821
BmrI ACTGGG 2 cut(s) 1618, 1828
BmsI GCATC 5 cut(s) 115, 802, 1131, 1559, 1622
BmtI GCTAGC 1 cut(s) 491
BmuI ACTGGG 2 cut(s) 1618, 1828
BpiI GAAGAC 1 cut(s) 924
BpmI CTGGAG 2 cut(s) 1283, 1842
Bpu10I CCTNAGC 1 cut(s) 1416
Bpu14I TTCGAA 2 cut(s) 78, 434
BpuEI CTTGAG 2 cut(s) 950, 1592
BsaBI GATNNNNATC 2 cut(s) 212, 1257
BsaJI CCNNGG 7 cut(s) 577, 619, 635, 1104, 1286, 1425, 1704
Bsc4I CCNNNNNNNGG 2 cut(s) 1562, 1772
Bse1I ACTGG 6 cut(s) 732, 1356, 1503, 1613, 1745, 1834
Bse8I GATNNNNATC 2 cut(s) 212, 1257
BseBI CCWGG 3 cut(s) 620, 1288, 1821
BseDI CCNNGG 7 cut(s) 577, 619, 635, 1104, 1286, 1425, 1704
BseGI GGATG 4 cut(s) 836, 1179, 1543, 1550
BseJI GATNNNNATC 2 cut(s) 212, 1257
BseLI CCNNNNNNNGG 2 cut(s) 1562, 1772
BseMII CTCAG 3 cut(s) 334, 1031, 1407
BseNI ACTGG 6 cut(s) 732, 1356, 1503, 1613, 1745, 1834
BseRI GAGGAG 1 cut(s) 104
BseSI GKGCMC 1 cut(s) 1424
BseXI GCAGC 4 cut(s) 22, 355, 1590, 1822
BseYI CCCAGC 1 cut(s) 479
BsgI GTGCAG 2 cut(s) 1589, 1829
BshFI GGCC 4 cut(s) 380, 576, 984, 1703
BshNI GGYRCC 2 cut(s) 1421, 1565
BsiHKAI GWGCWC 1 cut(s) 53
BslFI GGGAC 2 cut(s) 2, 1628
BslI CCNNNNNNNGG 2 cut(s) 1562, 1772
BsmAI GTCTC 2 cut(s) 773, 1729
BsmFI GGGAC 2 cut(s) 2, 1628
BsnI GGCC 4 cut(s) 380, 576, 984, 1703
Bsp119I TTCGAA 2 cut(s) 78, 434
Bsp1286I GDGCHC 2 cut(s) 53, 1424
Bsp143I GATC 4 cut(s) 314, 1258, 1383, 1828
Bsp19I CCATGG 2 cut(s) 1104, 1425
BspACI CCGC 4 cut(s) 377, 870, 1033, 1448
BspANI GGCC 4 cut(s) 380, 576, 984, 1703
BspCNI CTCAG 3 cut(s) 333, 1032, 1408
BspHI TCATGA 1 cut(s) 1522
BspLI GGNNCC 4 cut(s) 1423, 1567, 1644, 1830
BspOI GCTAGC 1 cut(s) 491
BspPI GGATC 3 cut(s) 309, 1823, 1836
BspT104I TTCGAA 2 cut(s) 78, 434
BspT107I GGYRCC 2 cut(s) 1421, 1565
BspTI CTTAAG 1 cut(s) 1711
BsrI ACTGG 6 cut(s) 732, 1356, 1503, 1613, 1745, 1834
BssECI CCNNGG 7 cut(s) 577, 619, 635, 1104, 1286, 1425, 1704
BssMI GATC 4 cut(s) 314, 1258, 1383, 1828
BssSI CACGAG 1 cut(s) 57
BssT1I CCWWGG 4 cut(s) 635, 1104, 1425, 1704
Bst2BI CACGAG 1 cut(s) 57
Bst2UI CCWGG 3 cut(s) 620, 1288, 1821
Bst4CI ACNGT 3 cut(s) 121, 851, 1720
BstAFI CTTAAG 1 cut(s) 1711
BstBI TTCGAA 2 cut(s) 78, 434
BstC8I GCNNGC 3 cut(s) 489, 791, 1460
BstDEI CTNAG 6 cut(s) 320, 663, 671, 1040, 1077, 1416
BstDSI CCRYGG 3 cut(s) 577, 1104, 1425
BstF5I GGATG 4 cut(s) 836, 1179, 1543, 1550
BstH2I RGCGCY 2 cut(s) 499, 935
BstHHI GCGC 2 cut(s) 498, 934
BstKTI GATC 4 cut(s) 317, 1261, 1386, 1831
BstMAI GTCTC 2 cut(s) 773, 1729
BstMBI GATC 4 cut(s) 314, 1258, 1383, 1828
BstMWI GCNNNNNNNGC 4 cut(s) 374, 377, 493, 502
BstNI CCWGG 3 cut(s) 620, 1288, 1821
BstNSI RCATGY 2 cut(s) 204, 1462
BstSCI CCNGG 3 cut(s) 618, 1286, 1819
BstSFI CTRYAG 4 cut(s) 297, 681, 927, 1719
BstSLI GKGCMC 1 cut(s) 1424
BstV1I GCAGC 4 cut(s) 22, 355, 1590, 1822
BstV2I GAAGAC 1 cut(s) 924
BstX2I RGATCY 2 cut(s) 1258, 1828
BstYI RGATCY 2 cut(s) 1258, 1828
BsuRI GGCC 4 cut(s) 380, 576, 984, 1703
BtgI CCRYGG 3 cut(s) 577, 1104, 1425
BtsCI GGATG 4 cut(s) 836, 1179, 1543, 1550
BtsIMutI CAGTG 2 cut(s) 328, 1606
Cac8I GCNNGC 3 cut(s) 489, 791, 1460
CciI TCATGA 1 cut(s) 1522
CfoI GCGC 2 cut(s) 498, 934
Cfr13I GGNCC 3 cut(s) 982, 1642, 1785
CseI GACGC 1 cut(s) 1529
DdeI CTNAG 6 cut(s) 320, 663, 671, 1040, 1077, 1416
DpnI GATC 4 cut(s) 316, 1260, 1385, 1830
DpnII GATC 4 cut(s) 314, 1258, 1383, 1828
DrdI GACNNNNNNGTC 1 cut(s) 1099
DseDI GACNNNNNNGTC 1 cut(s) 1099
EaeI YGGCCR 1 cut(s) 1701
Eco130I CCWWGG 4 cut(s) 635, 1104, 1425, 1704
Eco32I GATATC 2 cut(s) 328, 441
Eco47I GGWCC 2 cut(s) 1642, 1785
Eco47III AGCGCT 1 cut(s) 933
EcoO109I RGGNCCY 1 cut(s) 1642
EcoRII CCWGG 3 cut(s) 618, 1286, 1819
EcoRV GATATC 2 cut(s) 328, 441
EcoT14I CCWWGG 4 cut(s) 635, 1104, 1425, 1704
ErhI CCWWGG 4 cut(s) 635, 1104, 1425, 1704
FaqI GGGAC 2 cut(s) 2, 1628
Fnu4HI GCNGC 5 cut(s) 11, 369, 378, 1604, 1811
FokI GGATG 4 cut(s) 843, 1186, 1530, 1537
Fsp4HI GCNGC 5 cut(s) 11, 369, 378, 1604, 1811
FspBI CTAG 8 cut(s) 488, 545, 728, 873, 1647, 1767, 1800, 1840
GlaI GCGC 2 cut(s) 497, 933
GluI GCNGC 5 cut(s) 11, 369, 378, 1604, 1811
GsaI CCCAGC 1 cut(s) 483
GsuI CTGGAG 2 cut(s) 1283, 1842
HaeII RGCGCY 2 cut(s) 499, 935
HaeIII GGCC 4 cut(s) 380, 576, 984, 1703
HgaI GACGC 1 cut(s) 1529
HhaI GCGC 2 cut(s) 498, 934
Hin6I GCGC 2 cut(s) 496, 932
HinP1I GCGC 2 cut(s) 496, 932
HinfI GANTC 2 cut(s) 1036, 1253
HphI GGTGA 1 cut(s) 461
Hpy166II GTNNAC 2 cut(s) 391, 1293
Hpy188I TCNGA 5 cut(s) 409, 1041, 1092, 1258, 1785
Hpy188III TCNNGA 4 cut(s) 967, 1216, 1262, 1523
Hpy8I GTNNAC 2 cut(s) 391, 1293
HpyAV CCTTC 3 cut(s) 821, 1469, 1679
HpyCH4III ACNGT 3 cut(s) 121, 851, 1720
HpyCH4IV ACGT 2 cut(s) 775, 1626
HpyCH4V TGCA 9 cut(s) 128, 158, 212, 343, 998, 1323, 1550, 1606, 1810
HpyF10VI GCNNNNNNNGC 4 cut(s) 374, 377, 493, 502
HpyF3I CTNAG 6 cut(s) 320, 663, 671, 1040, 1077, 1416
HpySE526I ACGT 2 cut(s) 775, 1626
HspAI GCGC 2 cut(s) 496, 932
Kzo9I GATC 4 cut(s) 314, 1258, 1383, 1828
LmnI GCTCC 3 cut(s) 91, 503, 746
Lsp1109I GCAGC 4 cut(s) 22, 355, 1590, 1822
LweI GCATC 5 cut(s) 115, 802, 1131, 1559, 1622
MaeI CTAG 8 cut(s) 488, 545, 728, 873, 1647, 1767, 1800, 1840
MaeII ACGT 2 cut(s) 775, 1626
MaeIII GTNAC 2 cut(s) 880, 974
MalI GATC 4 cut(s) 316, 1260, 1385, 1830
MboI GATC 4 cut(s) 314, 1258, 1383, 1828
MboII GAAGA 9 cut(s) 269, 448, 518, 553, 610, 929, 1216, 1253, 1274
MflI RGATCY 2 cut(s) 1258, 1828
MhlI GDGCHC 2 cut(s) 53, 1424
MlsI TGGCCA 1 cut(s) 1703
MluNI TGGCCA 1 cut(s) 1703
MmeI TCCRAC 1 cut(s) 387
MnlI CCTC 8 cut(s) 53, 82, 285, 329, 566, 1117, 1411, 1633
Mox20I TGGCCA 1 cut(s) 1703
MroXI GAANNNNTTC 1 cut(s) 1271
MscI TGGCCA 1 cut(s) 1703
MseI TTAA 5 cut(s) 696, 957, 1634, 1712, 1751
MslI CAYNNNNRTG 2 cut(s) 909, 1021
Msp20I TGGCCA 1 cut(s) 1703
MspCI CTTAAG 1 cut(s) 1711
MspR9I CCNGG 3 cut(s) 620, 1288, 1821
MvaI CCWGG 3 cut(s) 620, 1288, 1821
MwoI GCNNNNNNNGC 4 cut(s) 374, 377, 493, 502
NcoI CCATGG 2 cut(s) 1104, 1425
NdeII GATC 4 cut(s) 314, 1258, 1383, 1828
NheI GCTAGC 1 cut(s) 487
NlaIV GGNNCC 4 cut(s) 1423, 1567, 1644, 1830
NmuCI GTSAC 1 cut(s) 880
NspI RCATGY 2 cut(s) 204, 1462
NspV TTCGAA 2 cut(s) 78, 434
PaeI GCATGC 1 cut(s) 1462
PagI TCATGA 1 cut(s) 1522
PdmI GAANNNNTTC 1 cut(s) 1271
PfeI GAWTC 2 cut(s) 1036, 1253
PkrI GCNGC 5 cut(s) 12, 370, 379, 1605, 1812
PpuMI RGGWCCY 1 cut(s) 1642
PsiI TTATAA 1 cut(s) 1130
Psp5II RGGWCCY 1 cut(s) 1642
Psp6I CCWGG 3 cut(s) 618, 1286, 1819
PspFI CCCAGC 1 cut(s) 479
PspGI CCWGG 3 cut(s) 618, 1286, 1819
PspN4I GGNNCC 4 cut(s) 1423, 1567, 1644, 1830
PspPI GGNCC 3 cut(s) 982, 1642, 1785
PspPPI RGGWCCY 1 cut(s) 1642
PsuI RGATCY 2 cut(s) 1258, 1828
RseI CAYNNNNRTG 2 cut(s) 909, 1021
SaqAI TTAA 5 cut(s) 696, 957, 1634, 1712, 1751
SatI GCNGC 5 cut(s) 11, 369, 378, 1604, 1811
Sau3AI GATC 4 cut(s) 314, 1258, 1383, 1828
Sau96I GGNCC 3 cut(s) 982, 1642, 1785
ScaI AGTACT 4 cut(s) 841, 1507, 1739, 1838
ScrFI CCNGG 3 cut(s) 620, 1288, 1821
SduI GDGCHC 2 cut(s) 53, 1424
SfaNI GCATC 5 cut(s) 115, 802, 1131, 1559, 1622
SfcI CTRYAG 4 cut(s) 297, 681, 927, 1719
SfuI TTCGAA 2 cut(s) 78, 434
SinI GGWCC 2 cut(s) 1642, 1785
SmiMI CAYNNNNRTG 2 cut(s) 909, 1021
SmlI CTYRAG 3 cut(s) 965, 1571, 1711
SmoI CTYRAG 3 cut(s) 965, 1571, 1711
SphI GCATGC 1 cut(s) 1462
SsiI CCGC 4 cut(s) 377, 870, 1033, 1448
SspI AATATT 3 cut(s) 629, 951, 1279
SspMI CTAG 8 cut(s) 488, 545, 728, 873, 1647, 1767, 1800, 1840
StyD4I CCNGG 3 cut(s) 618, 1286, 1819
StyI CCWWGG 4 cut(s) 635, 1104, 1425, 1704
TaaI ACNGT 3 cut(s) 121, 851, 1720
TaiI ACGT 2 cut(s) 778, 1629
TaqI TCGA 5 cut(s) 78, 113, 434, 646, 825
TatI WGTACW 6 cut(s) 388, 815, 839, 1505, 1737, 1836
TauI GCSGC 1 cut(s) 380
TfiI GAWTC 2 cut(s) 1036, 1253
Tru1I TTAA 5 cut(s) 696, 957, 1634, 1712, 1751
Tru9I TTAA 5 cut(s) 696, 957, 1634, 1712, 1751
TscAI CASTG 2 cut(s) 328, 1613
TseFI GTSAC 1 cut(s) 880
TseI GCWGC 4 cut(s) 10, 368, 1603, 1810
Tsp45I GTSAC 1 cut(s) 880
TspDTI ATGAA 9 cut(s) 99, 162, 270, 276, 325, 1200, 1217, 1456, 1539
TspGWI ACGGA 2 cut(s) 157, 1652
TspRI CASTG 2 cut(s) 328, 1613
Vha464I CTTAAG 1 cut(s) 1711
VpaK11BI GGWCC 2 cut(s) 1642, 1785
XapI RAATTY 6 cut(s) 357, 648, 687, 991, 1085, 1630
XceI RCATGY 2 cut(s) 204, 1462
XmnI GAANNNNTTC 1 cut(s) 1271
XspI CTAG 8 cut(s) 488, 545, 728, 873, 1647, 1767, 1800, 1840
ZrmI AGTACT 4 cut(s) 841, 1507, 1739, 1838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.