RLG00000026241

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000119
Physical Location & Seq
Forward (+)
1506502 .. 1509795
3294 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026241

Sequence Viewer

Length: 1896 bp
ATGTGGTTTGGGACGACCTCTGTTCGGAAAATTGCTGGAGTACGAAGAATTTCCTTGGCTTTGTTAGTAATTCAGAAATCATTTCATCATAAGAGAAGGCATAAAATAGTTATGTCTAACCGTCAGGTACCCTGCTACGATGACAGCATCATCGAAATGAGCGCTACAAAAGGAATAGGTTATGATTTCAATTGTCCTGAGGCTCTATTGCAACGTCCAGTACCGCGGACACGTGAAGTTGGAGAAGCTCAAGCAAGCAACAAGGGGAAAAGGCCAACAGTTGCGGAAATTCTTTCAGTTTTGGACCCATGGTGGAATACGATACTATTAACTTCATGTGTGATTGCAGTTATCTTTGATCCTTTGTTCGTTTACATTCCATACATCAGTGAGGAAAAAAAGTGCATGGGAATCGATAAACAAGTGCTGATTGCAGCTCTGGTTTTCCGATCAGTCACGGACATCACTTTCCTAGTGCATATCATATACCAACTTCGTGAAGCTATCAAATTTGCAGCCTCAAAGGTTCCAAGGGATACAAATCCGGATTGGGAACGGGTATCCCGAGTTCGGATGATTCAGTTTGCAAGGGAATTTTCTCGCAAATTGTCATGGCGCTCTTTCCTAACTGACGTTTTCGCTATTTTCCCCATGCCACAACTAATAGTAGGGTTGTTTTTCAAAATGGGAGGCAATAACTATTTGGAGAGAAGAAAGATTCTGAGCGGTTTTCTTCTAGTTCAATATGTGCCGAGAATTTATCGAATTTATCTATCGTATACTGCGGTTACACATTCCGCATTATGGGTTAAAGGTGCATTCAATCTTTTCCTCTACATCCTTGCCAGTCATGTACTGGGAGCCTTTTGGTACTTCTTTGCTATTCAGCGAGAGACATCATGTTGGTACCGAACTTGCATTGCTGATGAAAATCTATCAAAATCAAAATCAGGATGTACTTTTTACTGTCATGACAAAAATGCAAATATGACCGAACAATTCAATAATACTCTAGGAGAACTTTGCATTGTAAAAGTTCCATATAATGTGACTGATCCACCATTTGATTTTGGAATATTTTTTGATGCCCTCAAAAATGATATCCAGGGGCCAATAAATTTTCCACAAAAGATTGGTTACTGTTTTTGGTGGGGTTTGCGAAATTTAAGTATTTCACAATTACTTATCATTTATCAATTTCTTCCAGCGGAGGAGGTAAGAGAGAAGATTCAGACCAAAAAGAACGATATAGAAAAGTGGATGGAAAGAAATGGTCTTCAAGATGACATGAAGGAAGAGATCATGAAAAACATCAAGCAAAAATTGGAAGAGGACATAAATGCAGATCTGGAGGATCTATTCTCTATTCTTCCGTGGTATACCAAGAAAGCTCTAAAGCGCGTTCTCTGCATGAGTGCGCTAAGAAAAGTACCAATGCTCAGCAAGATGGATGAAAAAGTTTTGAAACTGATGTGCGACTATCTGAAGCCGGTGAATTACCCAGAGAATACCCTGGTTTTTCAGATGGGAGAACCACTTGATCGAATGGTCTTCATTACAGAAGGATTTATGTGGACTTACACGACTGCTACTGACAGTAGTCATTATCGAAAAGCAACAGAACCGGCTACTTCTCCATCCATGGATACCAACTTCCTCAAGAAGGGTGATTCTTATGGACACGCGCTTCTGCAGTTTGCATCGTCATCTCTTGCGGCCCTTCCTACCTCGAACGCAAATGTCCGTTGTCACACAAAGGTAGAGGCGTTTGTTCTCATGGCCAAGGACTTGAAAAACATAGTAGCTAAATGCGAAAATTTGTGGCCTTTCGACTACAATGCTTCTAAAGATGAGGCGGCGGATCAGGTGGCACCACTGAAGCAGTTTCAGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

632

Amino Acids

72.93

Weight (kDa)

9.02

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 127, 906
AccB1I GGYRCC 3 cut(s) 127, 906, 1870
AccBSI CCGCTC 1 cut(s) 726
AccI GTMKAC 2 cut(s) 779, 1379
AccII CGCG 3 cut(s) 226, 1401, 1685
AccIII TCCGGA 1 cut(s) 544
AclWI GGATC 4 cut(s) 353, 1049, 1362, 1869
AcoI YGGCCR 1 cut(s) 1779
AcsI RAATTY 9 cut(s) 48, 288, 509, 593, 756, 765, 1117, 1162, 1816
AcuI CTGAAG 1 cut(s) 1505
AcvI CACGTG 1 cut(s) 233
AfaI GTAC 8 cut(s) 42, 129, 222, 855, 872, 908, 958, 1431
AfeI AGCGCT 1 cut(s) 163
AfiI CCNNNNNNNGG 4 cut(s) 24, 570, 804, 1663
AflIII ACRYGT 1 cut(s) 230
AgsI TTSAA 8 cut(s) 190, 682, 743, 823, 1003, 1280, 1465, 1792
AjnI CCWGG 2 cut(s) 1104, 1512
AluBI AGCT 5 cut(s) 248, 437, 503, 1391, 1805
AluI AGCT 5 cut(s) 248, 437, 503, 1391, 1805
Alw26I GTCTC 1 cut(s) 887
AlwI GGATC 4 cut(s) 353, 1049, 1362, 1869
Ama87I CYCGRG 1 cut(s) 564
Aor13HI TCCGGA 1 cut(s) 544
Aor51HI AGCGCT 1 cut(s) 163
AoxI GGCC 5 cut(s) 272, 1109, 1716, 1779, 1823
ApeKI GCWGC 2 cut(s) 434, 515
ApoI RAATTY 9 cut(s) 48, 288, 509, 593, 756, 765, 1117, 1162, 1816
Asp700I GAANNNNTTC 1 cut(s) 49
Asp718I GGTACC 2 cut(s) 127, 906
AspLEI GCGC 5 cut(s) 164, 618, 1401, 1420, 1687
AspS9I GGNCC 3 cut(s) 304, 1109, 1717
AsuHPI GGTGA 2 cut(s) 1504, 1679
AvaI CYCGRG 1 cut(s) 564
AvaII GGWCC 1 cut(s) 304
AxyI CCTNAGG 1 cut(s) 198
BalI TGGCCA 1 cut(s) 1781
BanI GGYRCC 3 cut(s) 127, 906, 1870
BbrPI CACGTG 1 cut(s) 233
BbsI GAAGAC 2 cut(s) 1268, 1543
BbvI GCAGC 2 cut(s) 446, 527
BccI CCATC 4 cut(s) 1255, 1441, 1519, 1645
BcgI CGANNNNNNTGC 4 cut(s) 394, 428, 1820, 1854
BciT130I CCWGG 2 cut(s) 1106, 1514
BciVI GTATCC 3 cut(s) 529, 571, 1639
BcoDI GTCTC 1 cut(s) 887
BfaI CTAG 3 cut(s) 473, 737, 1013
BfmI CTRYAG 1 cut(s) 1691
BfoI RGCGCY 2 cut(s) 165, 619
BfuI GTATCC 3 cut(s) 529, 571, 1639
BglII AGATCT 1 cut(s) 1345
BisI GCNGC 4 cut(s) 435, 516, 1716, 1857
BlpI GCTNAGC 1 cut(s) 1439
BlsI GCNGC 4 cut(s) 436, 517, 1717, 1858
Bme1390I CCNGG 2 cut(s) 1106, 1514
Bme18I GGWCC 1 cut(s) 304
BmeT110I CYCGRG 1 cut(s) 564
BmgT120I GGNCC 3 cut(s) 304, 1109, 1717
BmiI GGNNCC 7 cut(s) 129, 306, 528, 862, 908, 1110, 1872
BmrFI CCNGG 2 cut(s) 1106, 1514
BmrI ACTGGG 1 cut(s) 866
BmsI GCATC 3 cut(s) 156, 1075, 1709
BmuI ACTGGG 1 cut(s) 866
BoxI GACNNNNGTC 1 cut(s) 1599
BpiI GAAGAC 2 cut(s) 1268, 1543
BpmI CTGGAG 2 cut(s) 57, 1370
Bpu1102I GCTNAGC 1 cut(s) 1439
BpuEI CTTGAG 2 cut(s) 234, 1643
Bsa29I ATCGAT 1 cut(s) 414
BsaAI YACGTR 1 cut(s) 233
BsaBI GATNNNNATC 2 cut(s) 540, 930
BsaJI CCNNGG 9 cut(s) 54, 224, 308, 530, 1105, 1373, 1512, 1641, 1782
BsaWI WCCGGW 1 cut(s) 544
Bsc4I CCNNNNNNNGG 4 cut(s) 24, 570, 804, 1663
Bse118I RCCGGY 2 cut(s) 1489, 1624
Bse1I ACTGG 3 cut(s) 218, 846, 861
Bse21I CCTNAGG 1 cut(s) 198
Bse3DI GCAATG 1 cut(s) 918
Bse8I GATNNNNATC 2 cut(s) 540, 930
BseAI TCCGGA 1 cut(s) 544
BseBI CCWGG 2 cut(s) 1106, 1514
BseCI ATCGAT 1 cut(s) 414
BseDI CCNNGG 9 cut(s) 54, 224, 308, 530, 1105, 1373, 1512, 1641, 1782
BseGI GGATG 6 cut(s) 579, 837, 959, 1266, 1456, 1637
BseJI GATNNNNATC 2 cut(s) 540, 930
BseLI CCNNNNNNNGG 4 cut(s) 24, 570, 804, 1663
BseMI GCAATG 1 cut(s) 918
BseMII CTCAG 3 cut(s) 189, 713, 1453
BseNI ACTGG 3 cut(s) 218, 846, 861
BseRI GAGGAG 1 cut(s) 1226
BseXI GCAGC 2 cut(s) 446, 527
Bsh1236I CGCG 3 cut(s) 226, 1401, 1685
BshFI GGCC 5 cut(s) 274, 1111, 1718, 1781, 1825
BshNI GGYRCC 3 cut(s) 127, 906, 1870
BshVI ATCGAT 1 cut(s) 414
BsiHKCI CYCGRG 1 cut(s) 564
BsiSI CCGG 3 cut(s) 545, 1490, 1625
BslFI GGGAC 1 cut(s) 25
BslI CCNNNNNNNGG 4 cut(s) 24, 570, 804, 1663
BsmAI GTCTC 1 cut(s) 887
BsmFI GGGAC 1 cut(s) 25
BsmI GAATGC 1 cut(s) 818
BsnI GGCC 5 cut(s) 274, 1111, 1718, 1781, 1825
BsoBI CYCGRG 1 cut(s) 564
Bsp13I TCCGGA 1 cut(s) 544
Bsp143I GATC 8 cut(s) 358, 449, 1054, 1299, 1345, 1354, 1540, 1861
Bsp1720I GCTNAGC 1 cut(s) 1439
Bsp19I CCATGG 2 cut(s) 308, 1641
BspANI GGCC 5 cut(s) 274, 1111, 1718, 1781, 1825
BspCNI CTCAG 3 cut(s) 190, 714, 1452
BspDI ATCGAT 1 cut(s) 414
BspEI TCCGGA 1 cut(s) 544
BspFNI CGCG 3 cut(s) 226, 1401, 1685
BspHI TCATGA 2 cut(s) 970, 1302
BspLI GGNNCC 7 cut(s) 129, 306, 528, 862, 908, 1110, 1872
BspMAI CTGCAG 1 cut(s) 1695
BspPI GGATC 4 cut(s) 353, 1049, 1362, 1869
BspT107I GGYRCC 3 cut(s) 127, 906, 1870
BsrBI CCGCTC 1 cut(s) 726
BsrDI GCAATG 1 cut(s) 918
BsrFI RCCGGY 2 cut(s) 1489, 1624
BsrI ACTGG 3 cut(s) 218, 846, 861
BssAI RCCGGY 2 cut(s) 1489, 1624
BssECI CCNNGG 9 cut(s) 54, 224, 308, 530, 1105, 1373, 1512, 1641, 1782
BssMI GATC 8 cut(s) 358, 449, 1054, 1299, 1345, 1354, 1540, 1861
BssNAI GTATAC 2 cut(s) 780, 1380
BssT1I CCWWGG 5 cut(s) 54, 308, 530, 1641, 1782
Bst1107I GTATAC 2 cut(s) 780, 1380
Bst2UI CCWGG 2 cut(s) 1106, 1514
Bst4CI ACNGT 5 cut(s) 122, 280, 968, 1142, 1598
Bst6I CTCTTC 2 cut(s) 1290, 1323
BstBAI YACGTR 1 cut(s) 233
BstC8I GCNNGC 1 cut(s) 256
BstDEI CTNAG 4 cut(s) 198, 722, 1421, 1439
BstDSI CCRYGG 4 cut(s) 224, 308, 1373, 1641
BstENI CCTNNNNNAGG 1 cut(s) 1661
BstF5I GGATG 6 cut(s) 579, 837, 959, 1266, 1456, 1637
BstFNI CGCG 3 cut(s) 226, 1401, 1685
BstH2I RGCGCY 2 cut(s) 165, 619
BstHHI GCGC 5 cut(s) 164, 618, 1401, 1420, 1687
BstKTI GATC 8 cut(s) 361, 452, 1057, 1302, 1348, 1357, 1543, 1864
BstMAI GTCTC 1 cut(s) 887
BstMBI GATC 8 cut(s) 358, 449, 1054, 1299, 1345, 1354, 1540, 1861
BstMWI GCNNNNNNNGC 2 cut(s) 1407, 1888
BstNI CCWGG 2 cut(s) 1106, 1514
BstPAI GACNNNNGTC 1 cut(s) 1599
BstSCI CCNGG 2 cut(s) 1104, 1512
BstSFI CTRYAG 1 cut(s) 1691
BstUI CGCG 3 cut(s) 226, 1401, 1685
BstV1I GCAGC 2 cut(s) 446, 527
BstV2I GAAGAC 2 cut(s) 1268, 1543
BstX2I RGATCY 2 cut(s) 1345, 1354
BstYI RGATCY 2 cut(s) 1345, 1354
BstZ17I GTATAC 2 cut(s) 780, 1380
Bsu15I ATCGAT 1 cut(s) 414
Bsu36I CCTNAGG 1 cut(s) 198
BsuI GTATCC 3 cut(s) 529, 571, 1639
BsuRI GGCC 5 cut(s) 274, 1111, 1718, 1781, 1825
BsuTUI ATCGAT 1 cut(s) 414
BtgI CCRYGG 4 cut(s) 224, 308, 1373, 1641
BtsCI GGATG 6 cut(s) 579, 837, 959, 1266, 1456, 1637
BtsIMutI CAGTG 2 cut(s) 394, 1874
Cac8I GCNNGC 1 cut(s) 256
CciI TCATGA 2 cut(s) 970, 1302
CfoI GCGC 5 cut(s) 164, 618, 1401, 1420, 1687
Cfr10I RCCGGY 2 cut(s) 1489, 1624
Cfr13I GGNCC 3 cut(s) 304, 1109, 1717
Cfr42I CCGCGG 1 cut(s) 227
ClaI ATCGAT 1 cut(s) 414
Csp6I GTAC 8 cut(s) 41, 128, 221, 854, 871, 907, 957, 1430
CviQI GTAC 8 cut(s) 41, 128, 221, 854, 871, 907, 957, 1430
DdeI CTNAG 4 cut(s) 198, 722, 1421, 1439
DpnI GATC 8 cut(s) 360, 451, 1056, 1301, 1347, 1356, 1542, 1863
DpnII GATC 8 cut(s) 358, 449, 1054, 1299, 1345, 1354, 1540, 1861
EaeI YGGCCR 1 cut(s) 1779
Eam1104I CTCTTC 2 cut(s) 1290, 1323
EarI CTCTTC 2 cut(s) 1290, 1323
EciI GGCGGA 1 cut(s) 1874
Eco130I CCWWGG 5 cut(s) 54, 308, 530, 1641, 1782
Eco32I GATATC 1 cut(s) 1102
Eco47I GGWCC 1 cut(s) 304
Eco47III AGCGCT 1 cut(s) 163
Eco57I CTGAAG 1 cut(s) 1505
Eco72I CACGTG 1 cut(s) 233
Eco81I CCTNAGG 1 cut(s) 198
Eco88I CYCGRG 1 cut(s) 564
EcoNI CCTNNNNNAGG 1 cut(s) 1661
EcoRII CCWGG 2 cut(s) 1104, 1512
EcoRV GATATC 1 cut(s) 1102
EcoT14I CCWWGG 5 cut(s) 54, 308, 530, 1641, 1782
ErhI CCWWGG 5 cut(s) 54, 308, 530, 1641, 1782
FaqI GGGAC 1 cut(s) 25
FblI GTMKAC 2 cut(s) 779, 1379
Fnu4HI GCNGC 4 cut(s) 435, 516, 1716, 1857
FokI GGATG 6 cut(s) 586, 824, 966, 1273, 1463, 1624
Fsp4HI GCNGC 4 cut(s) 435, 516, 1716, 1857
FspBI CTAG 3 cut(s) 473, 737, 1013
GlaI GCGC 5 cut(s) 163, 617, 1400, 1419, 1686
GluI GCNGC 4 cut(s) 435, 516, 1716, 1857
GsuI CTGGAG 2 cut(s) 57, 1370
HaeII RGCGCY 2 cut(s) 165, 619
HaeIII GGCC 5 cut(s) 274, 1111, 1718, 1781, 1825
HapII CCGG 3 cut(s) 545, 1490, 1625
HhaI GCGC 5 cut(s) 164, 618, 1401, 1420, 1687
Hin6I GCGC 5 cut(s) 162, 616, 1399, 1418, 1685
HinP1I GCGC 5 cut(s) 162, 616, 1399, 1418, 1685
HinfI GANTC 5 cut(s) 411, 577, 718, 1228, 1670
HpaII CCGG 3 cut(s) 545, 1490, 1625
HphI GGTGA 2 cut(s) 1504, 1679
Hpy166II GTNNAC 4 cut(s) 373, 780, 1380, 1575
Hpy188I TCNGA 8 cut(s) 27, 75, 449, 573, 723, 1233, 1485, 1524
Hpy8I GTNNAC 4 cut(s) 373, 780, 1380, 1575
HpyAV CCTTC 5 cut(s) 90, 1285, 1556, 1657, 1730
HpyCH4III ACNGT 5 cut(s) 122, 280, 968, 1142, 1598
HpyCH4IV ACGT 3 cut(s) 214, 232, 633
HpyF10VI GCNNNNNNNGC 2 cut(s) 1407, 1888
HpyF3I CTNAG 4 cut(s) 198, 722, 1421, 1439
HpySE526I ACGT 3 cut(s) 214, 232, 633
HspAI GCGC 5 cut(s) 162, 616, 1399, 1418, 1685
Kpn2I TCCGGA 1 cut(s) 544
KpnI GGTACC 2 cut(s) 131, 910
KspI CCGCGG 1 cut(s) 227
Kzo9I GATC 8 cut(s) 358, 449, 1054, 1299, 1345, 1354, 1540, 1861
LmnI GCTCC 1 cut(s) 860
Lsp1109I GCAGC 2 cut(s) 446, 527
LweI GCATC 3 cut(s) 156, 1075, 1709
MaeI CTAG 3 cut(s) 473, 737, 1013
MaeII ACGT 3 cut(s) 214, 232, 633
MaeIII GTNAC 5 cut(s) 454, 787, 1048, 1136, 1748
MalI GATC 8 cut(s) 360, 451, 1056, 1301, 1347, 1356, 1542, 1863
MbiI CCGCTC 1 cut(s) 726
MboI GATC 8 cut(s) 358, 449, 1054, 1299, 1345, 1354, 1540, 1861
MfeI CAATTG 1 cut(s) 190
MflI RGATCY 2 cut(s) 1345, 1354
MlsI TGGCCA 1 cut(s) 1781
MluNI TGGCCA 1 cut(s) 1781
MmeI TCCRAC 1 cut(s) 220
Mox20I TGGCCA 1 cut(s) 1781
MroI TCCGGA 1 cut(s) 544
MroXI GAANNNNTTC 1 cut(s) 49
MscI TGGCCA 1 cut(s) 1781
MseI TTAA 3 cut(s) 329, 810, 1166
MslI CAYNNNNRTG 1 cut(s) 155
Msp20I TGGCCA 1 cut(s) 1781
MspA1I CMGCKG 2 cut(s) 226, 1208
MspI CCGG 3 cut(s) 545, 1490, 1625
MspR9I CCNGG 2 cut(s) 1106, 1514
MunI CAATTG 1 cut(s) 190
Mva1269I GAATGC 1 cut(s) 818
MvaI CCWGG 2 cut(s) 1106, 1514
MvnI CGCG 3 cut(s) 226, 1401, 1685
MwoI GCNNNNNNNGC 2 cut(s) 1407, 1888
NcoI CCATGG 2 cut(s) 308, 1641
NdeII GATC 8 cut(s) 358, 449, 1054, 1299, 1345, 1354, 1540, 1861
NlaIV GGNNCC 7 cut(s) 129, 306, 528, 862, 908, 1110, 1872
NmeAIII GCCGAG 1 cut(s) 777
NmuCI GTSAC 3 cut(s) 454, 1048, 1748
PagI TCATGA 2 cut(s) 970, 1302
PcsI WCGNNNNNNNCGW 1 cut(s) 562
PctI GAATGC 1 cut(s) 818
PdmI GAANNNNTTC 1 cut(s) 49
PfeI GAWTC 5 cut(s) 411, 577, 718, 1228, 1670
PkrI GCNGC 4 cut(s) 436, 517, 1717, 1858
PmaCI CACGTG 1 cut(s) 233
PmlI CACGTG 1 cut(s) 233
Ppu21I YACGTR 1 cut(s) 233
PshAI GACNNNNGTC 1 cut(s) 1599
Psp6I CCWGG 2 cut(s) 1104, 1512
PspCI CACGTG 1 cut(s) 233
PspGI CCWGG 2 cut(s) 1104, 1512
PspN4I GGNNCC 7 cut(s) 129, 306, 528, 862, 908, 1110, 1872
PspPI GGNCC 3 cut(s) 304, 1109, 1717
PsrI GAACNNNNNNTAC 2 cut(s) 552, 584
PstI CTGCAG 1 cut(s) 1695
PsuI RGATCY 2 cut(s) 1345, 1354
RsaI GTAC 8 cut(s) 42, 129, 222, 855, 872, 908, 958, 1431
RsaNI GTAC 8 cut(s) 41, 128, 221, 854, 871, 907, 957, 1430
RseI CAYNNNNRTG 1 cut(s) 155
SacII CCGCGG 1 cut(s) 227
SaqAI TTAA 3 cut(s) 329, 810, 1166
SatI GCNGC 4 cut(s) 435, 516, 1716, 1857
Sau3AI GATC 8 cut(s) 358, 449, 1054, 1299, 1345, 1354, 1540, 1861
Sau96I GGNCC 3 cut(s) 304, 1109, 1717
ScrFI CCNGG 2 cut(s) 1106, 1514
SfaNI GCATC 3 cut(s) 156, 1075, 1709
SfcI CTRYAG 1 cut(s) 1691
Sfr303I CCGCGG 1 cut(s) 227
SgrBI CCGCGG 1 cut(s) 227
SinI GGWCC 1 cut(s) 304
SmiMI CAYNNNNRTG 1 cut(s) 155
SmlI CTYRAG 2 cut(s) 249, 1658
SmoI CTYRAG 2 cut(s) 249, 1658
SspI AATATT 1 cut(s) 1077
SspMI CTAG 3 cut(s) 473, 737, 1013
StyD4I CCNGG 2 cut(s) 1104, 1512
StyI CCWWGG 5 cut(s) 54, 308, 530, 1641, 1782
TaaI ACNGT 5 cut(s) 122, 280, 968, 1142, 1598
TaiI ACGT 3 cut(s) 217, 235, 636
TaqI TCGA 7 cut(s) 153, 414, 763, 1543, 1609, 1730, 1830
TaqII GACCGA 1 cut(s) 1007
TatI WGTACW 2 cut(s) 853, 956
TauI GCSGC 2 cut(s) 1718, 1859
TfiI GAWTC 5 cut(s) 411, 577, 718, 1228, 1670
Tru1I TTAA 3 cut(s) 329, 810, 1166
Tru9I TTAA 3 cut(s) 329, 810, 1166
TscAI CASTG 2 cut(s) 394, 1881
TseFI GTSAC 3 cut(s) 454, 1048, 1748
TseI GCWGC 2 cut(s) 434, 515
Tsp45I GTSAC 3 cut(s) 454, 1048, 1748
TspDTI ATGAA 7 cut(s) 74, 324, 942, 1304, 1319, 1467, 1543
TspGWI ACGGA 3 cut(s) 473, 1362, 1733
TspRI CASTG 2 cut(s) 394, 1881
VpaK11BI GGWCC 1 cut(s) 304
XagI CCTNNNNNAGG 1 cut(s) 1661
XapI RAATTY 9 cut(s) 48, 288, 509, 593, 756, 765, 1117, 1162, 1816
XcmI CCANNNNNNNNNTGG 1 cut(s) 853
XmiI GTMKAC 2 cut(s) 779, 1379
XmnI GAANNNNTTC 1 cut(s) 49
XspI CTAG 3 cut(s) 473, 737, 1013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.