RchiOBHm_Chr1g0381211

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000119
Physical Location & Seq
Reverse (-)
66609395 .. 66611880
2486 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60441

Sequence Viewer

Length: 1422 bp
ATGGGAATCGATAAACAAGTGCGGACTGCAGCTCTGGTTTTCCGATCAGTCACGGACATCACTTTCCTAGTGCATATCATATACCAACTTCGTGAAGCTATCAAATTTGCAGCCTCAAAGGTTCCAAGGGATACAAATTCAAAAAATTGGGAATGTGAATCGGTATCCCGAGCTCAGATGATTAAGTTTGCGACGGAATTTTCTCGCAAATTGTCATGGCGCTCTTTCCTAACTGATGTTTTCGCTATTTTCCCCATGCCACAACTGCTAATACTAGGGTTCTTTTTCGAAATGGGAGGCAGTAACTATTTGGAGAGAAGAAAGATTCTGAGTGGTTTTGTTCTAATCCAATATGTGCCAAGAATTTATCGAATTTATCTATCGTATACTGTGGTTACACATTCCGTATTATGGGTTAAAGGTGCATTCAATTTTTTTCTCTACATCCTTGCGAGTCATGTACTGGGAGCTTTTTGGTACTTTTTTTCTATTTTTCGAGAGACATCATGTTGTAATTTTGGCACAAGTTTGGAAACAAGTACCTATCTGTGGGAAAACAGCTTTGCAATTCTTATTTCTATCATCGGCTTGCTATTGTTTTTATATCTCATTGGAAATGTTCAGTTATATATGGCGAGGGCAACTACAAGAGCGGAGGAGGTAGGAGAGAAGATTCAGACCAAAAAGAACGATATAGAAAAGTGGATGGAAAAAAATGGCCTCCAAGATGACATGAAGGAAGAGATCATGAAAAACATTAAGCAGAAATTGGAAGAGGACATAAATGCAGATCTGGAGAATCTATTCTCTGTTCTTCCCTGGTATACCAAGAAAGCTCTAAAGCGAGTTCTTTGCATGAGTACGCTAAGAAAAGTACCAATGCTTAGCCAGATGGATGAAAAAGTTTTGAAAATGATGTGCGACTATCTGAAGCCGGTGAATTACCCAGAGAATACCTTGGTTTTTCAGATGGGAGAACCATTTGATCGAATGGTCTTCATTACAGAAGGGCTTATGTGGACTTACACGACTGCTACTGAGAGAAGTCATTACGGAAAAGCAACAGAACCGGCTACTTCTCCATCCATGGATACCAACTTCCTCAAGACGGGTGATTCTTATGGACACGCGCTTCTGCAGTTTGGATCATCATCTCTTGCGGCACTTCCTACCTCGAACGCAAATGTCCGGTGTCACACAAAGGTTGAGGCGTTTGTTCTCATGGCCAAGGACTTGAAAAACATAGTAACTAAATGCGAACATTTGTGGCCTTTCGACTACAATGCGTCTAAAGATGAGGCGGCGGATCATGTGCCACTACTGGGAAGTCTCAGCAACAAGAAGAGCCAAAGAAGCGTGTATCAACATCGACCACTGGCAACCGTGGGTGATGCGAAGCTGAAGCCTGAAAATCGCCCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

473

Amino Acids

54.43

Weight (kDa)

8.97

Isoelectric Point (pI)

39.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 653
AccI GTMKAC 2 cut(s) 386, 824
AccII CGCG 1 cut(s) 1130
AciI CCGC 5 cut(s) 22, 653, 1160, 1301, 1304
AclWI GGATC 2 cut(s) 1153, 1314
AcoI YGGCCR 1 cut(s) 1224
AcsI RAATTY 5 cut(s) 104, 136, 197, 363, 372
AcuI CTGAAG 2 cut(s) 950, 1421
AfaI GTAC 5 cut(s) 462, 479, 541, 862, 876
AfiI CCNNNNNNNGG 4 cut(s) 411, 549, 1108, 1322
AgsI TTSAA 4 cut(s) 141, 430, 910, 1237
AjnI CCWGG 1 cut(s) 818
AluBI AGCT 7 cut(s) 32, 98, 173, 470, 561, 836, 1399
AluI AGCT 7 cut(s) 32, 98, 173, 470, 561, 836, 1399
Alw21I GWGCWC 1 cut(s) 175
Alw26I GTCTC 2 cut(s) 494, 1334
AlwI GGATC 2 cut(s) 1153, 1314
Ama87I CYCGRG 1 cut(s) 168
AoxI GGCC 3 cut(s) 718, 1224, 1268
ApeKI GCWGC 2 cut(s) 29, 110
ApoI RAATTY 5 cut(s) 104, 136, 197, 363, 372
Asp700I GAANNNNTTC 1 cut(s) 803
AspLEI GCGC 2 cut(s) 222, 1132
AsuHPI GGTGA 3 cut(s) 949, 1124, 1400
AsuII TTCGAA 1 cut(s) 288
AvaI CYCGRG 1 cut(s) 168
BalI TGGCCA 1 cut(s) 1226
BanII GRGCYC 1 cut(s) 175
BbsI GAAGAC 1 cut(s) 988
Bbv12I GWGCWC 1 cut(s) 175
BbvI GCAGC 2 cut(s) 41, 122
BccI CCATC 4 cut(s) 700, 886, 964, 1090
BcgI CGANNNNNNTGC 4 cut(s) 834, 868, 1265, 1299
BciT130I CCWGG 1 cut(s) 820
BciVI GTATCC 3 cut(s) 124, 175, 1084
BcoDI GTCTC 2 cut(s) 494, 1334
BfaI CTAG 3 cut(s) 68, 275, 1420
BfmI CTRYAG 2 cut(s) 27, 1136
BfoI RGCGCY 1 cut(s) 223
BfuI GTATCC 3 cut(s) 124, 175, 1084
BglII AGATCT 1 cut(s) 790
BisI GCNGC 4 cut(s) 30, 111, 1161, 1302
BlpI GCTNAGC 1 cut(s) 884
BlsI GCNGC 4 cut(s) 31, 112, 1162, 1303
Bme1390I CCNGG 1 cut(s) 820
BmeT110I CYCGRG 1 cut(s) 168
BmiI GGNNCC 1 cut(s) 123
BmrFI CCNGG 1 cut(s) 820
BmrI ACTGGG 2 cut(s) 473, 1331
BmsI GCATC 1 cut(s) 1381
BmuI ACTGGG 2 cut(s) 473, 1331
BpiI GAAGAC 1 cut(s) 988
BpmI CTGGAG 1 cut(s) 815
Bpu1102I GCTNAGC 1 cut(s) 884
Bpu14I TTCGAA 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 1088
Bsa29I ATCGAT 1 cut(s) 9
BsaBI GATNNNNATC 1 cut(s) 1150
BsaJI CCNNGG 6 cut(s) 125, 818, 957, 1086, 1227, 1383
BsaWI WCCGGW 1 cut(s) 1188
Bsc4I CCNNNNNNNGG 4 cut(s) 411, 549, 1108, 1322
Bse118I RCCGGY 2 cut(s) 934, 1069
Bse1I ACTGG 3 cut(s) 468, 1326, 1380
Bse8I GATNNNNATC 1 cut(s) 1150
BseBI CCWGG 1 cut(s) 820
BseCI ATCGAT 1 cut(s) 9
BseDI CCNNGG 6 cut(s) 125, 818, 957, 1086, 1227, 1383
BseGI GGATG 4 cut(s) 444, 711, 901, 1082
BseJI GATNNNNATC 1 cut(s) 1150
BseLI CCNNNNNNNGG 4 cut(s) 411, 549, 1108, 1322
BseMII CTCAG 4 cut(s) 188, 320, 1029, 1345
BseNI ACTGG 3 cut(s) 468, 1326, 1380
BseRI GAGGAG 1 cut(s) 671
BseXI GCAGC 2 cut(s) 41, 122
Bsh1236I CGCG 1 cut(s) 1130
BshFI GGCC 3 cut(s) 720, 1226, 1270
BshVI ATCGAT 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 175
BsiHKCI CYCGRG 1 cut(s) 168
BsiSI CCGG 3 cut(s) 935, 1070, 1189
BslI CCNNNNNNNGG 4 cut(s) 411, 549, 1108, 1322
BsmAI GTCTC 2 cut(s) 494, 1334
BsmI GAATGC 1 cut(s) 425
BsnI GGCC 3 cut(s) 720, 1226, 1270
BsoBI CYCGRG 1 cut(s) 168
Bsp119I TTCGAA 1 cut(s) 288
Bsp1286I GDGCHC 1 cut(s) 175
Bsp143I GATC 6 cut(s) 44, 744, 790, 985, 1145, 1306
Bsp1720I GCTNAGC 1 cut(s) 884
Bsp19I CCATGG 1 cut(s) 1086
BspACI CCGC 5 cut(s) 22, 653, 1160, 1301, 1304
BspANI GGCC 3 cut(s) 720, 1226, 1270
BspCNI CTCAG 4 cut(s) 187, 321, 1030, 1344
BspDI ATCGAT 1 cut(s) 9
BspFNI CGCG 1 cut(s) 1130
BspHI TCATGA 1 cut(s) 747
BspLI GGNNCC 1 cut(s) 123
BspMAI CTGCAG 2 cut(s) 31, 1140
BspPI GGATC 2 cut(s) 1153, 1314
BspQI GCTCTTC 1 cut(s) 1337
BspT104I TTCGAA 1 cut(s) 288
BsrBI CCGCTC 1 cut(s) 653
BsrFI RCCGGY 2 cut(s) 934, 1069
BsrI ACTGG 3 cut(s) 468, 1326, 1380
BssAI RCCGGY 2 cut(s) 934, 1069
BssECI CCNNGG 6 cut(s) 125, 818, 957, 1086, 1227, 1383
BssMI GATC 6 cut(s) 44, 744, 790, 985, 1145, 1306
BssNAI GTATAC 2 cut(s) 387, 825
BssT1I CCWWGG 4 cut(s) 125, 957, 1086, 1227
Bst1107I GTATAC 2 cut(s) 387, 825
Bst2UI CCWGG 1 cut(s) 820
Bst4CI ACNGT 2 cut(s) 391, 1384
Bst6I CTCTTC 3 cut(s) 735, 768, 1337
BstBI TTCGAA 1 cut(s) 288
BstC8I GCNNGC 1 cut(s) 590
BstDEI CTNAG 6 cut(s) 174, 329, 866, 884, 1038, 1331
BstDSI CCRYGG 2 cut(s) 1086, 1383
BstF5I GGATG 4 cut(s) 444, 711, 901, 1082
BstFNI CGCG 1 cut(s) 1130
BstH2I RGCGCY 1 cut(s) 223
BstHHI GCGC 2 cut(s) 222, 1132
BstKTI GATC 6 cut(s) 47, 747, 793, 988, 1148, 1309
BstMAI GTCTC 2 cut(s) 494, 1334
BstMBI GATC 6 cut(s) 44, 744, 790, 985, 1145, 1306
BstMWI GCNNNNNNNGC 2 cut(s) 265, 1353
BstNI CCWGG 1 cut(s) 820
BstSCI CCNGG 1 cut(s) 818
BstSFI CTRYAG 2 cut(s) 27, 1136
BstUI CGCG 1 cut(s) 1130
BstV1I GCAGC 2 cut(s) 41, 122
BstV2I GAAGAC 1 cut(s) 988
BstX2I RGATCY 1 cut(s) 790
BstYI RGATCY 1 cut(s) 790
BstZ17I GTATAC 2 cut(s) 387, 825
Bsu15I ATCGAT 1 cut(s) 9
BsuI GTATCC 3 cut(s) 124, 175, 1084
BsuRI GGCC 3 cut(s) 720, 1226, 1270
BsuTUI ATCGAT 1 cut(s) 9
BtgI CCRYGG 2 cut(s) 1086, 1383
BtsCI GGATG 4 cut(s) 444, 711, 901, 1082
BtsIMutI CAGTG 1 cut(s) 1373
Cac8I GCNNGC 1 cut(s) 590
CciI TCATGA 1 cut(s) 747
CfoI GCGC 2 cut(s) 222, 1132
Cfr10I RCCGGY 2 cut(s) 934, 1069
ClaI ATCGAT 1 cut(s) 9
CseI GACGC 1 cut(s) 1275
Csp6I GTAC 5 cut(s) 461, 478, 540, 861, 875
CviQI GTAC 5 cut(s) 461, 478, 540, 861, 875
DdeI CTNAG 6 cut(s) 174, 329, 866, 884, 1038, 1331
DpnI GATC 6 cut(s) 46, 746, 792, 987, 1147, 1308
DpnII GATC 6 cut(s) 44, 744, 790, 985, 1145, 1306
EaeI YGGCCR 1 cut(s) 1224
Eam1104I CTCTTC 3 cut(s) 735, 768, 1337
EarI CTCTTC 3 cut(s) 735, 768, 1337
EciI GGCGGA 1 cut(s) 1319
Ecl136II GAGCTC 1 cut(s) 173
Eco130I CCWWGG 4 cut(s) 125, 957, 1086, 1227
Eco24I GRGCYC 1 cut(s) 175
Eco53kI GAGCTC 1 cut(s) 173
Eco57I CTGAAG 2 cut(s) 950, 1421
Eco88I CYCGRG 1 cut(s) 168
EcoICRI GAGCTC 1 cut(s) 173
EcoRII CCWGG 1 cut(s) 818
EcoT14I CCWWGG 4 cut(s) 125, 957, 1086, 1227
EcoT38I GRGCYC 1 cut(s) 175
ErhI CCWWGG 4 cut(s) 125, 957, 1086, 1227
FblI GTMKAC 2 cut(s) 386, 824
Fnu4HI GCNGC 4 cut(s) 30, 111, 1161, 1302
FokI GGATG 4 cut(s) 431, 718, 908, 1069
FriOI GRGCYC 1 cut(s) 175
Fsp4HI GCNGC 4 cut(s) 30, 111, 1161, 1302
FspBI CTAG 3 cut(s) 68, 275, 1420
GlaI GCGC 2 cut(s) 221, 1131
GluI GCNGC 4 cut(s) 30, 111, 1161, 1302
GsuI CTGGAG 1 cut(s) 815
HaeII RGCGCY 1 cut(s) 223
HaeIII GGCC 3 cut(s) 720, 1226, 1270
HapII CCGG 3 cut(s) 935, 1070, 1189
HgaI GACGC 1 cut(s) 1275
HhaI GCGC 2 cut(s) 222, 1132
Hin6I GCGC 2 cut(s) 220, 1130
HinP1I GCGC 2 cut(s) 220, 1130
HinfI GANTC 7 cut(s) 6, 158, 325, 454, 673, 799, 1115
HpaII CCGG 3 cut(s) 935, 1070, 1189
HphI GGTGA 3 cut(s) 949, 1124, 1400
Hpy166II GTNNAC 3 cut(s) 387, 825, 1020
Hpy188I TCNGA 6 cut(s) 44, 177, 330, 678, 930, 969
Hpy188III TCNNGA 6 cut(s) 92, 168, 497, 748, 794, 1105
Hpy8I GTNNAC 3 cut(s) 387, 825, 1020
Hpy99I CGWCG 1 cut(s) 196
HpyAV CCTTC 2 cut(s) 730, 1001
HpyCH4III ACNGT 2 cut(s) 391, 1384
HpyCH4V TGCA 8 cut(s) 29, 73, 110, 425, 566, 788, 855, 1138
HpyF10VI GCNNNNNNNGC 2 cut(s) 265, 1353
HpyF3I CTNAG 6 cut(s) 174, 329, 866, 884, 1038, 1331
HspAI GCGC 2 cut(s) 220, 1130
Kzo9I GATC 6 cut(s) 44, 744, 790, 985, 1145, 1306
LguI GCTCTTC 1 cut(s) 1337
LmnI GCTCC 1 cut(s) 467
Lsp1109I GCAGC 2 cut(s) 41, 122
LweI GCATC 1 cut(s) 1381
MaeI CTAG 3 cut(s) 68, 275, 1420
MaeIII GTNAC 5 cut(s) 49, 302, 394, 1193, 1246
MalI GATC 6 cut(s) 46, 746, 792, 987, 1147, 1308
MbiI CCGCTC 1 cut(s) 653
MboI GATC 6 cut(s) 44, 744, 790, 985, 1145, 1306
MboII GAAGA 7 cut(s) 330, 682, 752, 785, 806, 988, 1354
MflI RGATCY 1 cut(s) 790
MhlI GDGCHC 1 cut(s) 175
MlsI TGGCCA 1 cut(s) 1226
MluNI TGGCCA 1 cut(s) 1226
MlyI GAGTC 1 cut(s) 463
Mox20I TGGCCA 1 cut(s) 1226
MroXI GAANNNNTTC 1 cut(s) 803
MscI TGGCCA 1 cut(s) 1226
MseI TTAA 3 cut(s) 183, 417, 759
Msp20I TGGCCA 1 cut(s) 1226
MspI CCGG 3 cut(s) 935, 1070, 1189
MspR9I CCNGG 1 cut(s) 820
Mva1269I GAATGC 1 cut(s) 425
MvaI CCWGG 1 cut(s) 820
MvnI CGCG 1 cut(s) 1130
MwoI GCNNNNNNNGC 2 cut(s) 265, 1353
NcoI CCATGG 1 cut(s) 1086
NdeII GATC 6 cut(s) 44, 744, 790, 985, 1145, 1306
NlaIV GGNNCC 1 cut(s) 123
NmuCI GTSAC 2 cut(s) 49, 1193
NspV TTCGAA 1 cut(s) 288
PagI TCATGA 1 cut(s) 747
PciSI GCTCTTC 1 cut(s) 1337
PctI GAATGC 1 cut(s) 425
PdmI GAANNNNTTC 1 cut(s) 803
PfeI GAWTC 6 cut(s) 6, 158, 325, 673, 799, 1115
PkrI GCNGC 4 cut(s) 31, 112, 1162, 1303
PleI GAGTC 1 cut(s) 462
PpsI GAGTC 1 cut(s) 462
Psp124BI GAGCTC 1 cut(s) 175
Psp6I CCWGG 1 cut(s) 818
PspGI CCWGG 1 cut(s) 818
PspN4I GGNNCC 1 cut(s) 123
PstI CTGCAG 2 cut(s) 31, 1140
PsuI RGATCY 1 cut(s) 790
RsaI GTAC 5 cut(s) 462, 479, 541, 862, 876
RsaNI GTAC 5 cut(s) 461, 478, 540, 861, 875
SacI GAGCTC 1 cut(s) 175
SapI GCTCTTC 1 cut(s) 1337
SaqAI TTAA 3 cut(s) 183, 417, 759
SatI GCNGC 4 cut(s) 30, 111, 1161, 1302
Sau3AI GATC 6 cut(s) 44, 744, 790, 985, 1145, 1306
SchI GAGTC 1 cut(s) 463
ScrFI CCNGG 1 cut(s) 820
SduI GDGCHC 1 cut(s) 175
SfaNI GCATC 1 cut(s) 1381
SfcI CTRYAG 2 cut(s) 27, 1136
SfuI TTCGAA 1 cut(s) 288
SmlI CTYRAG 1 cut(s) 1103
SmoI CTYRAG 1 cut(s) 1103
SsiI CCGC 5 cut(s) 22, 653, 1160, 1301, 1304
SspMI CTAG 3 cut(s) 68, 275, 1420
SstI GAGCTC 1 cut(s) 175
StyD4I CCNGG 1 cut(s) 818
StyI CCWWGG 4 cut(s) 125, 957, 1086, 1227
TaaI ACNGT 2 cut(s) 391, 1384
TaqI TCGA 8 cut(s) 9, 288, 370, 496, 988, 1175, 1275, 1369
TatI WGTACW 1 cut(s) 460
TauI GCSGC 2 cut(s) 1163, 1304
TfiI GAWTC 6 cut(s) 6, 158, 325, 673, 799, 1115
Tru1I TTAA 3 cut(s) 183, 417, 759
Tru9I TTAA 3 cut(s) 183, 417, 759
TscAI CASTG 1 cut(s) 1380
TseFI GTSAC 2 cut(s) 49, 1193
TseI GCWGC 2 cut(s) 29, 110
Tsp45I GTSAC 2 cut(s) 49, 1193
TspDTI ATGAA 4 cut(s) 749, 764, 912, 988
TspGWI ACGGA 4 cut(s) 68, 209, 394, 1068
TspRI CASTG 1 cut(s) 1380
XapI RAATTY 5 cut(s) 104, 136, 197, 363, 372
XmiI GTMKAC 2 cut(s) 386, 824
XmnI GAANNNNTTC 1 cut(s) 803
XspI CTAG 3 cut(s) 68, 275, 1420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.