Rh5AG320900

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
47603934 .. 47610605
6672 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG320900.1

Sequence Viewer

Length: 1896 bp
ATGATTCAAAGCTCCGTATATGATGTCATTGCGAAAGCTGCACTATCACACCCGAGAGAAATGGAAAGGACAGCGACTAAAGGACTTCTTGCAAATTTGAAATCGACTAATGGACTTCTTGCAATTTTGAAATCACATCGGACTCTCATACTTACAATTTCATGTGTGATTGCAGTCATAGTGGATCCATTGTTCTTTTACCTTCCAATAATTGATGGGAAAAGAAAGTGCATTGGAATGGACACAATATTGAGGAATGTGGCACTTATTTTCCGATCACTCACCGATATCGGTTTCATAGTGAATATTATACATAAAATTCGTGAAGCTGTGAATAAAACAAGAGCAGATTGTCTTAAAAACATTGAAAAAATGATTGCTGAAGAACGAAATCGAGGTGAGAGCGGAAATAAGTTTGCTAAGTCATTAGCTCGTAACTTGTCGTGGCAGACCATCTTAATCGACTTTTTGGCTGTTCTTCCCATCCCCCAAGTGATAATAGTAGCTGTTAGAAGCTCTAGATGTTTGGATAAAAGAAAGATTCTAAACTTTCTTCTTCTCGCCCAGTATCTGCCGAGGGTTTATCGAATGCGTCATTCATCTATACAACTTAGATCAAGAACTGGAATATGGGTTAAAGGTTCATTCTATTTTTTCTTGTACATCCTTGCCAGCCATGTACTTGGTGCCTTTTGGTATTATTTTTCTATTCAACAAGAGACATCTTGTTGGCATCGGGCTTGCAAAAAGCATGGTGGAGTAAAATGTAATTTTTACTGCCATGAAAACATGACTCCAAGAAATTTGACATTCCCCATCAATTCTATAGATAAATATTGCCTTGTAGATGTTCCGGCAAATGAAACTGCACCATTTGATTTTGGAATCTTTCTTGATTCTCTTAAGAATAAGAACACGGCATCAATACAATTTCCAAAGAAGTTTTTCTACTCTTTTTGGTGGGGACTTCGAAATCTGAGTAATTTTGGCACAAATTTGCAAACAAGTACTTATGTGTGGGAAAACTGCTTTGCAATTCTGATTTCAATCATTGGCCTGCTATTATTCTTATATCTCATTGGAAAAGTACAGACATTTATTTCGATGAGAACTGCGAATTCCGAGGAGAGAAGAAAAAAATTCAAATCAAAAGAGCTAGATATACAAATGTGGATGAAAAGCAATGATCTCAAGAGAGATATGATGGAAGACATCAGAGTACATACAAATGAAAAGTGGGAAGAAATACGAGATGCAAATATAGAGAACCTCATCTCTATTCTTCCCGTGCAATCTCGGAAAAATCTTAAACATTCTCTTTGCATGGAAATGCTGAGCAAGGTGCCAAAGCTTAAAACTCTGAAAGGTGAAGCTTTGACGTTGATCTGCGATCGTCTGAAGCCAGTGGTCTATCAGGATAATAGCTTTGTTTTCCAAGAAGGAGAACCACTTGATCGCATTCTTTTCATTACGGAAGGCTTAATATGGACATACCAGGCGGCGGGCACTACCGATAGTAGTAGCACTTGTCAAAATGGAATAGGAAAAACAGGTTTCAGTTTTCTTGAGAAAGGTGGATTTTACGGAGACGATCAACTTCTGAGTTGGGCTATAGCATCACACAAGAATGATCTTTCCTTTAGCAACCTGCCAATCTCCAAAGTGAATGTGAAATGCCATGCAAAAGTAGAAGGCTTTGTACTCATGGCCAAGGACTTGAAAACTGTAGTCTCCGCTAATTACATAGTTTATTGGGGTTTCCACGATTCTTCTCAGGAAAGAGAGGAGGCAGCAATTCAAGCCATAAAGAAAGTATGGGATCGTCGTAACAAAGATAGACCAAAGGGAAATCCAATGATGTCACTCCCAGCCGGGCCACTGGCTACAATATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

631

Amino Acids

72.24

Weight (kDa)

9.48

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1656
AccB1I GGYRCC 2 cut(s) 686, 1342
AccBSI CCGCTC 1 cut(s) 405
AciI CCGC 4 cut(s) 405, 1499, 1502, 1734
AclWI GGATC 3 cut(s) 179, 192, 1827
AcoI YGGCCR 1 cut(s) 1707
AcsI RAATTY 6 cut(s) 94, 318, 802, 994, 1117, 1139
AcuI CTGAAG 2 cut(s) 402, 1418
AfaI GTAC 6 cut(s) 662, 681, 1009, 1089, 1221, 1701
AfiI CCNNNNNNNGG 1 cut(s) 1501
AflII CTTAAG 1 cut(s) 902
AgsI TTSAA 9 cut(s) 8, 100, 130, 368, 713, 1047, 1144, 1720, 1799
AjnI CCWGG 1 cut(s) 1494
AloI GAACNNNNNNTCC 2 cut(s) 176, 208
Alw26I GTCTC 3 cut(s) 713, 1581, 1735
AlwI GGATC 3 cut(s) 179, 192, 1827
AlwNI CAGNNNCTG 1 cut(s) 571
Ama87I CYCGRG 1 cut(s) 52
AoxI GGCC 3 cut(s) 1054, 1707, 1874
ApeKI GCWGC 2 cut(s) 38, 1790
ApoI RAATTY 6 cut(s) 94, 318, 802, 994, 1117, 1139
ArsI GACNNNNNNTTYG 2 cut(s) 1084, 1116
Asp700I GAANNNNTTC 1 cut(s) 944
AspS9I GGNCC 1 cut(s) 1874
AsuC2I CCSGG 1 cut(s) 1873
AsuHPI GGTGA 3 cut(s) 274, 410, 1379
AsuII TTCGAA 1 cut(s) 970
AvaI CYCGRG 1 cut(s) 52
BaeGI GKGCMC 1 cut(s) 1508
BalI TGGCCA 1 cut(s) 1709
BamHI GGATCC 1 cut(s) 184
BanI GGYRCC 2 cut(s) 686, 1342
BarI GAAGNNNNNNTAC 4 cut(s) 932, 964, 1683, 1715
BbsI GAAGAC 1 cut(s) 1215
BbvI GCAGC 2 cut(s) 25, 1802
BccI CCATC 5 cut(s) 209, 461, 491, 824, 1198
BceAI ACGGC 1 cut(s) 933
BciT130I CCWGG 1 cut(s) 1496
BcnI CCSGG 1 cut(s) 1873
BcoDI GTCTC 3 cut(s) 713, 1581, 1735
BfaI CTAG 2 cut(s) 519, 1157
BfmI CTRYAG 3 cut(s) 825, 1611, 1725
BfrI CTTAAG 1 cut(s) 902
BfuAI ACCTGC 1 cut(s) 1656
BisI GCNGC 3 cut(s) 39, 1500, 1791
BlpI GCTNAGC 1 cut(s) 1334
BlsI GCNGC 3 cut(s) 40, 1501, 1792
BmcAI AGTACT 1 cut(s) 1009
Bme1390I CCNGG 2 cut(s) 1496, 1873
BmeT110I CYCGRG 1 cut(s) 52
BmgT120I GGNCC 1 cut(s) 1874
BmiI GGNNCC 3 cut(s) 186, 688, 1344
BmrFI CCNGG 2 cut(s) 1496, 1873
BmrI ACTGGG 1 cut(s) 559
BmsI GCATC 4 cut(s) 742, 929, 1243, 1625
BmuI ACTGGG 1 cut(s) 559
BpiI GAAGAC 1 cut(s) 1215
Bpu1102I GCTNAGC 1 cut(s) 1334
Bpu14I TTCGAA 1 cut(s) 970
BpuEI CTTGAG 2 cut(s) 1175, 1586
BpuMI CCSGG 1 cut(s) 1873
BsaBI GATNNNNATC 1 cut(s) 1046
BsaJI CCNNGG 3 cut(s) 575, 1122, 1710
Bsc4I CCNNNNNNNGG 1 cut(s) 1501
Bse1I ACTGG 4 cut(s) 565, 628, 1403, 1884
Bse3DI GCAATG 2 cut(s) 27, 1189
Bse8I GATNNNNATC 1 cut(s) 1046
BseBI CCWGG 1 cut(s) 1496
BseDI CCNNGG 3 cut(s) 575, 1122, 1710
BseGI GGATG 3 cut(s) 483, 663, 1179
BseJI GATNNNNATC 1 cut(s) 1046
BseLI CCNNNNNNNGG 1 cut(s) 1501
BseMI GCAATG 2 cut(s) 27, 1189
BseMII CTCAG 4 cut(s) 968, 1325, 1592, 1787
BseNI ACTGG 4 cut(s) 565, 628, 1403, 1884
BseRI GAGGAG 2 cut(s) 1139, 1799
BseSI GKGCMC 1 cut(s) 1508
BseXI GCAGC 2 cut(s) 25, 1802
BseYI CCCAGC 1 cut(s) 1867
BsgI GTGCAG 2 cut(s) 24, 852
Bsh1285I CGRYCG 1 cut(s) 1393
BshFI GGCC 3 cut(s) 1056, 1709, 1876
BshNI GGYRCC 2 cut(s) 686, 1342
BsiEI CGRYCG 1 cut(s) 1393
BsiHKCI CYCGRG 1 cut(s) 52
BsiSI CCGG 2 cut(s) 854, 1872
BslFI GGGAC 1 cut(s) 978
BslI CCNNNNNNNGG 1 cut(s) 1501
BsmAI GTCTC 3 cut(s) 713, 1581, 1735
BsmBI CGTCTC 1 cut(s) 1581
BsmFI GGGAC 1 cut(s) 978
BsmI GAATGC 2 cut(s) 594, 1458
BsnI GGCC 3 cut(s) 1056, 1709, 1876
BsoBI CYCGRG 1 cut(s) 52
Bsp119I TTCGAA 1 cut(s) 970
Bsp1286I GDGCHC 1 cut(s) 1508
Bsp1407I TGTACA 1 cut(s) 660
Bsp1720I GCTNAGC 1 cut(s) 1334
BspACI CCGC 4 cut(s) 405, 1499, 1502, 1734
BspANI GGCC 3 cut(s) 1056, 1709, 1876
BspCNI CTCAG 4 cut(s) 969, 1326, 1593, 1786
BspLI GGNNCC 3 cut(s) 186, 688, 1344
BspMI ACCTGC 1 cut(s) 1656
BspPI GGATC 3 cut(s) 179, 192, 1827
BspT104I TTCGAA 1 cut(s) 970
BspT107I GGYRCC 2 cut(s) 686, 1342
BspTI CTTAAG 1 cut(s) 902
BsrBI CCGCTC 1 cut(s) 405
BsrDI GCAATG 2 cut(s) 27, 1189
BsrGI TGTACA 1 cut(s) 660
BsrI ACTGG 4 cut(s) 565, 628, 1403, 1884
BssECI CCNNGG 3 cut(s) 575, 1122, 1710
BssT1I CCWWGG 1 cut(s) 1710
Bst2UI CCWGG 1 cut(s) 1496
Bst4CI ACNGT 1 cut(s) 1726
BstAFI CTTAAG 1 cut(s) 902
BstAUI TGTACA 1 cut(s) 660
BstBI TTCGAA 1 cut(s) 970
BstC8I GCNNGC 4 cut(s) 673, 742, 1058, 1504
BstDEI CTNAG 6 cut(s) 420, 611, 977, 1334, 1601, 1773
BstF5I GGATG 3 cut(s) 483, 663, 1179
BstMAI GTCTC 3 cut(s) 713, 1581, 1735
BstMCI CGRYCG 1 cut(s) 1393
BstMWI GCNNNNNNNGC 2 cut(s) 38, 1799
BstNI CCWGG 1 cut(s) 1496
BstSCI CCNGG 2 cut(s) 1494, 1871
BstSFI CTRYAG 3 cut(s) 825, 1611, 1725
BstSLI GKGCMC 1 cut(s) 1508
BstV1I GCAGC 2 cut(s) 25, 1802
BstV2I GAAGAC 1 cut(s) 1215
BstX2I RGATCY 1 cut(s) 184
BstXI CCANNNNNNTGG 1 cut(s) 683
BstYI RGATCY 1 cut(s) 184
BsuRI GGCC 3 cut(s) 1056, 1709, 1876
BtsCI GGATG 3 cut(s) 483, 663, 1179
BtsIMutI CAGTG 2 cut(s) 1410, 1877
BveI ACCTGC 1 cut(s) 1656
Cac8I GCNNGC 4 cut(s) 673, 742, 1058, 1504
CaiI CAGNNNCTG 1 cut(s) 571
Cfr13I GGNCC 1 cut(s) 1874
CseI GACGC 1 cut(s) 581
Csp6I GTAC 6 cut(s) 661, 680, 1008, 1088, 1220, 1700
CviAII CATG 8 cut(s) 162, 677, 752, 782, 790, 1324, 1679, 1705
CviQI GTAC 6 cut(s) 661, 680, 1008, 1088, 1220, 1700
DdeI CTNAG 6 cut(s) 420, 611, 977, 1334, 1601, 1773
EaeI YGGCCR 1 cut(s) 1707
Eco130I CCWWGG 1 cut(s) 1710
Eco32I GATATC 1 cut(s) 289
Eco57I CTGAAG 2 cut(s) 402, 1418
Eco88I CYCGRG 1 cut(s) 52
EcoRI GAATTC 1 cut(s) 1117
EcoRII CCWGG 1 cut(s) 1494
EcoRV GATATC 1 cut(s) 289
EcoT14I CCWWGG 1 cut(s) 1710
ErhI CCWWGG 1 cut(s) 1710
Esp3I CGTCTC 1 cut(s) 1581
FaeI CATG 8 cut(s) 165, 680, 755, 785, 793, 1327, 1682, 1708
FalI AAGNNNNNCTT 2 cut(s) 72, 104
FaqI GGGAC 1 cut(s) 978
FatI CATG 8 cut(s) 161, 676, 751, 781, 789, 1323, 1678, 1704
FauI CCCGC 1 cut(s) 1495
Fnu4HI GCNGC 3 cut(s) 39, 1500, 1791
FokI GGATG 3 cut(s) 470, 650, 1186
Fsp4HI GCNGC 3 cut(s) 39, 1500, 1791
FspBI CTAG 2 cut(s) 519, 1157
GluI GCNGC 3 cut(s) 39, 1500, 1791
GsaI CCCAGC 1 cut(s) 1871
HaeIII GGCC 3 cut(s) 1056, 1709, 1876
HapII CCGG 2 cut(s) 854, 1872
HgaI GACGC 1 cut(s) 581
Hin1II CATG 8 cut(s) 165, 680, 755, 785, 793, 1327, 1682, 1708
HindIII AAGCTT 2 cut(s) 1349, 1371
HinfI GANTC 7 cut(s) 4, 142, 541, 793, 885, 896, 1766
HpaII CCGG 2 cut(s) 854, 1872
HphI GGTGA 3 cut(s) 274, 410, 1379
Hpy188III TCNNGA 8 cut(s) 323, 519, 618, 893, 1192, 1415, 1565, 1775
Hpy99I CGWCG 1 cut(s) 1827
HpyAV CCTTC 4 cut(s) 212, 1433, 1469, 1685
HpyCH4III ACNGT 1 cut(s) 1726
HpyCH4IV ACGT 1 cut(s) 1379
HpyF10VI GCNNNNNNNGC 2 cut(s) 38, 1799
HpyF3I CTNAG 6 cut(s) 420, 611, 977, 1334, 1601, 1773
HpySE526I ACGT 1 cut(s) 1379
Hsp92II CATG 8 cut(s) 165, 680, 755, 785, 793, 1327, 1682, 1708
LmnI GCTCC 1 cut(s) 17
Lsp1109I GCAGC 2 cut(s) 25, 1802
LweI GCATC 4 cut(s) 742, 929, 1243, 1625
MaeI CTAG 2 cut(s) 519, 1157
MaeII ACGT 1 cut(s) 1379
MaeIII GTNAC 3 cut(s) 434, 1826, 1860
MbiI CCGCTC 1 cut(s) 405
MboII GAAGA 9 cut(s) 395, 470, 545, 548, 1143, 1220, 1253, 1274, 1761
MflI RGATCY 1 cut(s) 184
MhlI GDGCHC 1 cut(s) 1508
MlsI TGGCCA 1 cut(s) 1709
MluNI TGGCCA 1 cut(s) 1709
MlyI GAGTC 2 cut(s) 136, 787
MnlI CCTC 7 cut(s) 246, 389, 570, 1117, 1280, 1777, 1780
Mox20I TGGCCA 1 cut(s) 1709
MroXI GAANNNNTTC 1 cut(s) 944
MscI TGGCCA 1 cut(s) 1709
MseI TTAA 7 cut(s) 357, 458, 636, 903, 1308, 1353, 1481
MslI CAYNNNNRTG 4 cut(s) 236, 1227, 1328, 1626
Msp20I TGGCCA 1 cut(s) 1709
MspCI CTTAAG 1 cut(s) 902
MspI CCGG 2 cut(s) 854, 1872
MspR9I CCNGG 2 cut(s) 1496, 1873
Mva1269I GAATGC 2 cut(s) 594, 1458
MvaI CCWGG 1 cut(s) 1496
MwoI GCNNNNNNNGC 2 cut(s) 38, 1799
NciI CCSGG 1 cut(s) 1873
NlaIII CATG 8 cut(s) 165, 680, 755, 785, 793, 1327, 1682, 1708
NlaIV GGNNCC 3 cut(s) 186, 688, 1344
NmeAIII GCCGAG 1 cut(s) 600
NmuCI GTSAC 1 cut(s) 1860
NspV TTCGAA 1 cut(s) 970
PctI GAATGC 2 cut(s) 594, 1458
PdmI GAANNNNTTC 1 cut(s) 944
PfeI GAWTC 5 cut(s) 4, 541, 885, 896, 1766
PkrI GCNGC 3 cut(s) 40, 1501, 1792
Ple19I CGATCG 1 cut(s) 1393
PleI GAGTC 2 cut(s) 136, 787
PpsI GAGTC 2 cut(s) 136, 787
Psp6I CCWGG 1 cut(s) 1494
PspFI CCCAGC 1 cut(s) 1867
PspGI CCWGG 1 cut(s) 1494
PspN4I GGNNCC 3 cut(s) 186, 688, 1344
PspPI GGNCC 1 cut(s) 1874
PstNI CAGNNNCTG 1 cut(s) 571
PsuI RGATCY 1 cut(s) 184
PvuI CGATCG 1 cut(s) 1393
RsaI GTAC 6 cut(s) 662, 681, 1009, 1089, 1221, 1701
RsaNI GTAC 6 cut(s) 661, 680, 1008, 1088, 1220, 1700
RseI CAYNNNNRTG 4 cut(s) 236, 1227, 1328, 1626
SaqAI TTAA 7 cut(s) 357, 458, 636, 903, 1308, 1353, 1481
SatI GCNGC 3 cut(s) 39, 1500, 1791
Sau96I GGNCC 1 cut(s) 1874
ScaI AGTACT 1 cut(s) 1009
SchI GAGTC 2 cut(s) 136, 787
ScrFI CCNGG 2 cut(s) 1496, 1873
SduI GDGCHC 1 cut(s) 1508
SfaNI GCATC 4 cut(s) 742, 929, 1243, 1625
SfcI CTRYAG 3 cut(s) 825, 1611, 1725
SfuI TTCGAA 1 cut(s) 970
SmiMI CAYNNNNRTG 4 cut(s) 236, 1227, 1328, 1626
SmlI CTYRAG 3 cut(s) 902, 1190, 1565
SmoI CTYRAG 3 cut(s) 902, 1190, 1565
SsiI CCGC 4 cut(s) 405, 1499, 1502, 1734
SspI AATATT 3 cut(s) 249, 307, 836
SspMI CTAG 2 cut(s) 519, 1157
StyD4I CCNGG 2 cut(s) 1494, 1871
StyI CCWWGG 1 cut(s) 1710
TaaI ACNGT 1 cut(s) 1726
TaiI ACGT 1 cut(s) 1382
TaqI TCGA 6 cut(s) 104, 394, 462, 586, 970, 1103
TatI WGTACW 6 cut(s) 660, 679, 1007, 1087, 1219, 1699
TauI GCSGC 1 cut(s) 1502
TfiI GAWTC 5 cut(s) 4, 541, 885, 896, 1766
Tru1I TTAA 7 cut(s) 357, 458, 636, 903, 1308, 1353, 1481
Tru9I TTAA 7 cut(s) 357, 458, 636, 903, 1308, 1353, 1481
TscAI CASTG 2 cut(s) 1410, 1884
TseFI GTSAC 1 cut(s) 1860
TseI GCWGC 2 cut(s) 38, 1790
Tsp45I GTSAC 1 cut(s) 1860
TspDTI ATGAA 9 cut(s) 150, 286, 588, 633, 798, 876, 1190, 1245, 1456
TspGWI ACGGA 3 cut(s) 4, 1487, 1599
TspRI CASTG 2 cut(s) 1410, 1884
Vha464I CTTAAG 1 cut(s) 902
XapI RAATTY 6 cut(s) 94, 318, 802, 994, 1117, 1139
XbaI TCTAGA 1 cut(s) 518
XmnI GAANNNNTTC 1 cut(s) 944
XspI CTAG 2 cut(s) 519, 1157
ZrmI AGTACT 1 cut(s) 1009
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.