Rmu_sc0002183.1_g000013

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002183.1
OG0000119
Physical Location & Seq
Reverse (-)
54383 .. 60078
5696 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002183.1_g000013.1.cds

Sequence Viewer

Length: 1728 bp
atgcctgatgatgataacaacgtgattcctagtctcctcgcgacccgactgtcagcctcaccagatcaacccagcgaccgtacttccagtcccagtctccccaggagccgactgcgagcgcaaccgccactgttacttccagcgaagctagagtcacgctttagcaaacccgtgttcctctccaacttcccagtgattgctctgctcggcaagaagtccttttccggaaggcaagaaaagaaccctgtgacgaggttgatgctctcctcgtccacaacgcttgaagaagaagtcaggtcacgggactaccccaacgactgcaccccgcggtgctggcacgcctgcgcaaccactcgctcaaaagagactgtttgcacaccaactggttttggagccaaacagctgtcaaatataaactatcattgcagtaattgtggaattggttatgatttcaactgtcctgaggctctatggcaacatccaatacggaaacgtgaacctgaagaaactcaagcaagcaacaaagggaaaaggccaacagttgcggaagttctttcagtttttaacccatggtggaatacgatactattaacttcatgtgtgattgcagttttatttgatcctttgttcttttacattccatacatcaatgagaaagaaaagtgcatgggaatcgataaacaagtgcggactgcagctctggttttccgatcagtcacggacatcactttcctagtgcatatcatataccaacttcgtgaagctatcaaatttgcagcctcaaaggttccaagggatacaaattcaaaaaattgggaatgtgaatcggtatcccgagctcagatgattaagtttgcgacggagttttctcgcaaattgtcatggcgctctttcctaactgatgttttcgctattttccccatgccacaattatatatggcgagggcaactacaagagcggaggaggtaggagagaagattcagaccaaaaagaacgatatagaaaagtggatggaaaaaaatggcctccaagatgacatgaaggaagagatcatgaaaaacattaagcagaaattggaagaggacataaatgcagatctggagaatctattctctgttcttccctggtataccaagaaagctctaaagcgagttctttgcatgagtacgctaagaaaagtaccaatgcttagccagatggatgaaaaagttttgaaaatgatgtgcgactatctgaagccggtgaattacccagagaataccttggtttttcagatgggagaaccatttgatcgaatggtcttcattacagaagggcttatgtggacttacacgactgctactgagagaagtcattacggaaaagcaacagaaccggctacttctccatccatggataccaacttcctcaagacgggtgattcttatggacacgcgcttctgcagtttggatcatcatctcttgcggcacttcctacctcgaacgcaaatgtccggtgtcacacaaaggttgaggcgtttgttctcatggccaaggacttgaaaaacatagtaactaaatgcgaacatttgtggcctttcgactacaatgcgtctaaagatgaggcggcggatcatgtgccactactgggaagtctcagcaacaagaagagccaaagaagcgtgtatcaacatcgaccactggcaaccgtgggtgatgcgaagctgaagcctgaaaatcgcccctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

575

Amino Acids

65.45

Weight (kDa)

8.92

Isoelectric Point (pI)

53.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 49
Acc16I TGCGCA 1 cut(s) 346
AccBSI CCGCTC 1 cut(s) 959
AccI GTMKAC 1 cut(s) 1130
AccII CGCG 3 cut(s) 41, 328, 1436
AccIII TCCGGA 1 cut(s) 224
AciI CCGC 9 cut(s) 125, 326, 328, 545, 688, 959, 1466, 1607, 1610
AclWI GGATC 3 cut(s) 614, 1459, 1620
AcoI YGGCCR 1 cut(s) 1530
AcsI RAATTY 2 cut(s) 770, 802
AcuI CTGAAG 3 cut(s) 522, 1256, 1727
AfaI GTAC 3 cut(s) 82, 1168, 1182
AfiI CCNNNNNNNGG 2 cut(s) 1414, 1628
AgsI TTSAA 5 cut(s) 284, 454, 807, 1216, 1543
AjnI CCWGG 2 cut(s) 101, 1124
AluBI AGCT 7 cut(s) 148, 403, 698, 764, 839, 1142, 1705
AluI AGCT 7 cut(s) 148, 403, 698, 764, 839, 1142, 1705
Alw21I GWGCWC 1 cut(s) 841
Alw26I GTCTC 4 cut(s) 38, 101, 359, 1640
AlwI GGATC 3 cut(s) 614, 1459, 1620
Ama87I CYCGRG 1 cut(s) 834
Aor13HI TCCGGA 1 cut(s) 224
AoxI GGCC 4 cut(s) 533, 1024, 1530, 1574
ApeKI GCWGC 2 cut(s) 695, 776
ApoI RAATTY 2 cut(s) 770, 802
ArsI GACNNNNNNTTYG 2 cut(s) 137, 169
Asp700I GAANNNNTTC 1 cut(s) 1109
AspLEI GCGC 4 cut(s) 121, 347, 888, 1438
AsuHPI GGTGA 4 cut(s) 51, 1255, 1430, 1706
AvaI CYCGRG 1 cut(s) 834
AxyI CCTNAGG 1 cut(s) 462
BalI TGGCCA 1 cut(s) 1532
BanII GRGCYC 1 cut(s) 841
BbsI GAAGAC 1 cut(s) 1294
Bbv12I GWGCWC 1 cut(s) 841
BbvI GCAGC 2 cut(s) 707, 788
BccI CCATC 4 cut(s) 1006, 1192, 1270, 1396
BcgI CGANNNNNNTGC 8 cut(s) 241, 275, 655, 689, 1140, 1174, 1571, 1605
BciT130I CCWGG 2 cut(s) 103, 1126
BciVI GTATCC 3 cut(s) 790, 841, 1390
BcoDI GTCTC 4 cut(s) 38, 101, 359, 1640
BfaI CTAG 4 cut(s) 30, 149, 734, 1726
BfmI CTRYAG 2 cut(s) 693, 1442
BfoI RGCGCY 1 cut(s) 889
BfuI GTATCC 3 cut(s) 790, 841, 1390
BglII AGATCT 1 cut(s) 1096
BisI GCNGC 4 cut(s) 696, 777, 1467, 1608
BlpI GCTNAGC 1 cut(s) 1190
BlsI GCNGC 4 cut(s) 697, 778, 1468, 1609
Bme1390I CCNGG 2 cut(s) 103, 1126
BmeT110I CYCGRG 1 cut(s) 834
BmiI GGNNCC 3 cut(s) 107, 394, 789
BmrFI CCNGG 2 cut(s) 103, 1126
BmrI ACTGGG 3 cut(s) 87, 185, 1637
BmsI GCATC 2 cut(s) 249, 1687
BmuI ACTGGG 3 cut(s) 87, 185, 1637
BpiI GAAGAC 1 cut(s) 1294
BpmI CTGGAG 1 cut(s) 1121
Bpu1102I GCTNAGC 1 cut(s) 1190
BpuEI CTTGAG 2 cut(s) 495, 1394
Bsa29I ATCGAT 1 cut(s) 675
BsaBI GATNNNNATC 1 cut(s) 1456
BsaJI CCNNGG 9 cut(s) 101, 326, 569, 791, 1124, 1263, 1392, 1533, 1689
BsaWI WCCGGW 2 cut(s) 224, 1494
Bsc4I CCNNNNNNNGG 2 cut(s) 1414, 1628
Bse118I RCCGGY 2 cut(s) 1240, 1375
Bse1I ACTGG 6 cut(s) 87, 93, 191, 388, 1632, 1686
Bse21I CCTNAGG 1 cut(s) 462
Bse3DI GCAATG 1 cut(s) 421
Bse8I GATNNNNATC 1 cut(s) 1456
BseAI TCCGGA 1 cut(s) 224
BseBI CCWGG 2 cut(s) 103, 1126
BseCI ATCGAT 1 cut(s) 675
BseDI CCNNGG 9 cut(s) 101, 326, 569, 791, 1124, 1263, 1392, 1533, 1689
BseGI GGATG 4 cut(s) 478, 1017, 1207, 1388
BseJI GATNNNNATC 1 cut(s) 1456
BseLI CCNNNNNNNGG 2 cut(s) 1414, 1628
BseMI GCAATG 1 cut(s) 421
BseMII CTCAG 4 cut(s) 453, 854, 1335, 1651
BseNI ACTGG 6 cut(s) 87, 93, 191, 388, 1632, 1686
BseRI GAGGAG 3 cut(s) 26, 256, 977
BseXI GCAGC 2 cut(s) 707, 788
BseYI CCCAGC 1 cut(s) 71
BsgI GTGCAG 1 cut(s) 304
Bsh1236I CGCG 3 cut(s) 41, 328, 1436
Bsh1285I CGRYCG 1 cut(s) 79
BshFI GGCC 4 cut(s) 535, 1026, 1532, 1576
BshVI ATCGAT 1 cut(s) 675
BsiEI CGRYCG 1 cut(s) 79
BsiHKAI GWGCWC 1 cut(s) 841
BsiHKCI CYCGRG 1 cut(s) 834
BsiSI CCGG 4 cut(s) 225, 1241, 1376, 1495
BslFI GGGAC 2 cut(s) 75, 317
BslI CCNNNNNNNGG 2 cut(s) 1414, 1628
BsmAI GTCTC 4 cut(s) 38, 101, 359, 1640
BsmFI GGGAC 2 cut(s) 75, 317
BsnI GGCC 4 cut(s) 535, 1026, 1532, 1576
BsoBI CYCGRG 1 cut(s) 834
Bsp1286I GDGCHC 1 cut(s) 841
Bsp13I TCCGGA 1 cut(s) 224
Bsp143I GATC 8 cut(s) 64, 619, 710, 1050, 1096, 1291, 1451, 1612
Bsp1720I GCTNAGC 1 cut(s) 1190
Bsp19I CCATGG 2 cut(s) 569, 1392
Bsp68I TCGCGA 1 cut(s) 41
BspACI CCGC 9 cut(s) 125, 326, 328, 545, 688, 959, 1466, 1607, 1610
BspANI GGCC 4 cut(s) 535, 1026, 1532, 1576
BspCNI CTCAG 4 cut(s) 454, 853, 1336, 1650
BspDI ATCGAT 1 cut(s) 675
BspEI TCCGGA 1 cut(s) 224
BspFNI CGCG 3 cut(s) 41, 328, 1436
BspHI TCATGA 1 cut(s) 1053
BspLI GGNNCC 3 cut(s) 107, 394, 789
BspMAI CTGCAG 2 cut(s) 697, 1446
BspPI GGATC 3 cut(s) 614, 1459, 1620
BspQI GCTCTTC 1 cut(s) 1643
BsrBI CCGCTC 1 cut(s) 959
BsrDI GCAATG 1 cut(s) 421
BsrFI RCCGGY 2 cut(s) 1240, 1375
BsrI ACTGG 6 cut(s) 87, 93, 191, 388, 1632, 1686
BssAI RCCGGY 2 cut(s) 1240, 1375
BssECI CCNNGG 9 cut(s) 101, 326, 569, 791, 1124, 1263, 1392, 1533, 1689
BssMI GATC 8 cut(s) 64, 619, 710, 1050, 1096, 1291, 1451, 1612
BssNAI GTATAC 1 cut(s) 1131
BssT1I CCWWGG 5 cut(s) 569, 791, 1263, 1392, 1533
Bst1107I GTATAC 1 cut(s) 1131
Bst2UI CCWGG 2 cut(s) 103, 1126
Bst4CI ACNGT 7 cut(s) 51, 80, 132, 370, 458, 541, 1690
Bst6I CTCTTC 3 cut(s) 1041, 1074, 1643
BstC8I GCNNGC 5 cut(s) 117, 335, 339, 343, 517
BstDEI CTNAG 6 cut(s) 462, 840, 1172, 1190, 1344, 1637
BstDSI CCRYGG 4 cut(s) 326, 569, 1392, 1689
BstF5I GGATG 4 cut(s) 478, 1017, 1207, 1388
BstFNI CGCG 3 cut(s) 41, 328, 1436
BstH2I RGCGCY 1 cut(s) 889
BstHHI GCGC 4 cut(s) 121, 347, 888, 1438
BstKTI GATC 8 cut(s) 67, 622, 713, 1053, 1099, 1294, 1454, 1615
BstMAI GTCTC 4 cut(s) 38, 101, 359, 1640
BstMBI GATC 8 cut(s) 64, 619, 710, 1050, 1096, 1291, 1451, 1612
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 2 cut(s) 334, 1659
BstNI CCWGG 2 cut(s) 103, 1126
BstSCI CCNGG 2 cut(s) 101, 1124
BstSFI CTRYAG 2 cut(s) 693, 1442
BstUI CGCG 3 cut(s) 41, 328, 1436
BstV1I GCAGC 2 cut(s) 707, 788
BstV2I GAAGAC 1 cut(s) 1294
BstX2I RGATCY 1 cut(s) 1096
BstYI RGATCY 1 cut(s) 1096
BstZ17I GTATAC 1 cut(s) 1131
Bsu15I ATCGAT 1 cut(s) 675
Bsu36I CCTNAGG 1 cut(s) 462
BsuI GTATCC 3 cut(s) 790, 841, 1390
BsuRI GGCC 4 cut(s) 535, 1026, 1532, 1576
BsuTUI ATCGAT 1 cut(s) 675
BtgI CCRYGG 4 cut(s) 326, 569, 1392, 1689
BtsCI GGATG 4 cut(s) 478, 1017, 1207, 1388
BtsIMutI CAGTG 3 cut(s) 128, 198, 1679
BtuMI TCGCGA 1 cut(s) 41
Cac8I GCNNGC 5 cut(s) 117, 335, 339, 343, 517
CciI TCATGA 1 cut(s) 1053
CfoI GCGC 4 cut(s) 121, 347, 888, 1438
Cfr10I RCCGGY 2 cut(s) 1240, 1375
Cfr42I CCGCGG 1 cut(s) 329
ClaI ATCGAT 1 cut(s) 675
CseI GACGC 1 cut(s) 1581
Csp6I GTAC 3 cut(s) 81, 1167, 1181
CspCI CAANNNNNGTGG 2 cut(s) 262, 297
CviQI GTAC 3 cut(s) 81, 1167, 1181
DdeI CTNAG 6 cut(s) 462, 840, 1172, 1190, 1344, 1637
DpnI GATC 8 cut(s) 66, 621, 712, 1052, 1098, 1293, 1453, 1614
DpnII GATC 8 cut(s) 64, 619, 710, 1050, 1096, 1291, 1451, 1612
DrdI GACNNNNNNGTC 1 cut(s) 49
DseDI GACNNNNNNGTC 1 cut(s) 49
EaeI YGGCCR 1 cut(s) 1530
Eam1104I CTCTTC 3 cut(s) 1041, 1074, 1643
EarI CTCTTC 3 cut(s) 1041, 1074, 1643
EciI GGCGGA 1 cut(s) 1625
Ecl136II GAGCTC 1 cut(s) 839
Eco130I CCWWGG 5 cut(s) 569, 791, 1263, 1392, 1533
Eco24I GRGCYC 1 cut(s) 841
Eco53kI GAGCTC 1 cut(s) 839
Eco57I CTGAAG 3 cut(s) 522, 1256, 1727
Eco81I CCTNAGG 1 cut(s) 462
Eco88I CYCGRG 1 cut(s) 834
EcoICRI GAGCTC 1 cut(s) 839
EcoRII CCWGG 2 cut(s) 101, 1124
EcoT14I CCWWGG 5 cut(s) 569, 791, 1263, 1392, 1533
EcoT38I GRGCYC 1 cut(s) 841
ErhI CCWWGG 5 cut(s) 569, 791, 1263, 1392, 1533
FalI AAGNNNNNCTT 2 cut(s) 203, 235
FaqI GGGAC 2 cut(s) 75, 317
FauI CCCGC 1 cut(s) 333
FblI GTMKAC 1 cut(s) 1130
Fnu4HI GCNGC 4 cut(s) 696, 777, 1467, 1608
FokI GGATG 4 cut(s) 465, 1024, 1214, 1375
FriOI GRGCYC 1 cut(s) 841
Fsp4HI GCNGC 4 cut(s) 696, 777, 1467, 1608
FspBI CTAG 4 cut(s) 30, 149, 734, 1726
FspI TGCGCA 1 cut(s) 346
GlaI GCGC 4 cut(s) 120, 346, 887, 1437
GluI GCNGC 4 cut(s) 696, 777, 1467, 1608
GsaI CCCAGC 1 cut(s) 75
GsuI CTGGAG 1 cut(s) 1121
HaeII RGCGCY 1 cut(s) 889
HaeIII GGCC 4 cut(s) 535, 1026, 1532, 1576
HapII CCGG 4 cut(s) 225, 1241, 1376, 1495
HgaI GACGC 1 cut(s) 1581
HhaI GCGC 4 cut(s) 121, 347, 888, 1438
Hin6I GCGC 4 cut(s) 119, 345, 886, 1436
HinP1I GCGC 4 cut(s) 119, 345, 886, 1436
HinfI GANTC 7 cut(s) 25, 152, 672, 824, 979, 1105, 1421
HpaII CCGG 4 cut(s) 225, 1241, 1376, 1495
HphI GGTGA 4 cut(s) 51, 1255, 1430, 1706
Hpy166II GTNNAC 4 cut(s) 273, 497, 1131, 1326
Hpy188I TCNGA 5 cut(s) 710, 843, 984, 1236, 1275
Hpy188III TCNNGA 8 cut(s) 40, 225, 461, 758, 834, 1054, 1100, 1411
Hpy8I GTNNAC 4 cut(s) 273, 497, 1131, 1326
Hpy99I CGWCG 1 cut(s) 862
HpyAV CCTTC 3 cut(s) 222, 1036, 1307
HpyCH4III ACNGT 7 cut(s) 51, 80, 132, 370, 458, 541, 1690
HpyCH4IV ACGT 2 cut(s) 21, 493
HpyF10VI GCNNNNNNNGC 2 cut(s) 334, 1659
HpyF3I CTNAG 6 cut(s) 462, 840, 1172, 1190, 1344, 1637
HpySE526I ACGT 2 cut(s) 21, 493
HspAI GCGC 4 cut(s) 119, 345, 886, 1436
Kpn2I TCCGGA 1 cut(s) 224
KspI CCGCGG 1 cut(s) 329
Kzo9I GATC 8 cut(s) 64, 619, 710, 1050, 1096, 1291, 1451, 1612
LguI GCTCTTC 1 cut(s) 1643
LmnI GCTCC 2 cut(s) 105, 392
Lsp1109I GCAGC 2 cut(s) 707, 788
LweI GCATC 2 cut(s) 249, 1687
MaeI CTAG 4 cut(s) 30, 149, 734, 1726
MaeII ACGT 2 cut(s) 21, 493
MaeIII GTNAC 7 cut(s) 132, 153, 247, 297, 715, 1499, 1552
MalI GATC 8 cut(s) 66, 621, 712, 1052, 1098, 1293, 1453, 1614
MbiI CCGCTC 1 cut(s) 959
MboI GATC 8 cut(s) 64, 619, 710, 1050, 1096, 1291, 1451, 1612
MboII GAAGA 9 cut(s) 296, 299, 515, 988, 1058, 1091, 1112, 1294, 1660
MflI RGATCY 1 cut(s) 1096
MhlI GDGCHC 1 cut(s) 841
MlsI TGGCCA 1 cut(s) 1532
MluCI AATT 9 cut(s) 430, 438, 770, 802, 811, 875, 929, 1073, 1246
MluNI TGGCCA 1 cut(s) 1532
MlyI GAGTC 1 cut(s) 161
MmeI TCCRAC 1 cut(s) 207
Mox20I TGGCCA 1 cut(s) 1532
MroI TCCGGA 1 cut(s) 224
MroXI GAANNNNTTC 1 cut(s) 1109
MscI TGGCCA 1 cut(s) 1532
MseI TTAA 4 cut(s) 564, 590, 849, 1065
Msp20I TGGCCA 1 cut(s) 1532
MspA1I CMGCKG 2 cut(s) 328, 403
MspI CCGG 4 cut(s) 225, 1241, 1376, 1495
MspR9I CCNGG 2 cut(s) 103, 1126
MvaI CCWGG 2 cut(s) 103, 1126
MvnI CGCG 3 cut(s) 41, 328, 1436
MwoI GCNNNNNNNGC 2 cut(s) 334, 1659
NcoI CCATGG 2 cut(s) 569, 1392
NdeII GATC 8 cut(s) 64, 619, 710, 1050, 1096, 1291, 1451, 1612
NlaIV GGNNCC 3 cut(s) 107, 394, 789
NmeAIII GCCGAG 1 cut(s) 186
NmuCI GTSAC 5 cut(s) 153, 247, 297, 715, 1499
NruI TCGCGA 1 cut(s) 41
NsbI TGCGCA 1 cut(s) 346
PagI TCATGA 1 cut(s) 1053
PciSI GCTCTTC 1 cut(s) 1643
PdmI GAANNNNTTC 1 cut(s) 1109
PfeI GAWTC 6 cut(s) 25, 672, 824, 979, 1105, 1421
PkrI GCNGC 4 cut(s) 697, 778, 1468, 1609
PleI GAGTC 1 cut(s) 160
PpsI GAGTC 1 cut(s) 160
Psp124BI GAGCTC 1 cut(s) 841
Psp6I CCWGG 2 cut(s) 101, 1124
PspFI CCCAGC 1 cut(s) 71
PspGI CCWGG 2 cut(s) 101, 1124
PspN4I GGNNCC 3 cut(s) 107, 394, 789
PstI CTGCAG 2 cut(s) 697, 1446
PsuI RGATCY 1 cut(s) 1096
PvuII CAGCTG 1 cut(s) 403
RruI TCGCGA 1 cut(s) 41
RsaI GTAC 3 cut(s) 82, 1168, 1182
RsaNI GTAC 3 cut(s) 81, 1167, 1181
SacI GAGCTC 1 cut(s) 841
SacII CCGCGG 1 cut(s) 329
SapI GCTCTTC 1 cut(s) 1643
SaqAI TTAA 4 cut(s) 564, 590, 849, 1065
SatI GCNGC 4 cut(s) 696, 777, 1467, 1608
Sau3AI GATC 8 cut(s) 64, 619, 710, 1050, 1096, 1291, 1451, 1612
SchI GAGTC 1 cut(s) 161
ScrFI CCNGG 2 cut(s) 103, 1126
SduI GDGCHC 1 cut(s) 841
SfaNI GCATC 2 cut(s) 249, 1687
SfcI CTRYAG 2 cut(s) 693, 1442
Sfr303I CCGCGG 1 cut(s) 329
SgrBI CCGCGG 1 cut(s) 329
SmlI CTYRAG 2 cut(s) 510, 1409
SmoI CTYRAG 2 cut(s) 510, 1409
Sse9I AATT 9 cut(s) 430, 438, 770, 802, 811, 875, 929, 1073, 1246
SsiI CCGC 9 cut(s) 125, 326, 328, 545, 688, 959, 1466, 1607, 1610
SspMI CTAG 4 cut(s) 30, 149, 734, 1726
SstI GAGCTC 1 cut(s) 841
StyD4I CCNGG 2 cut(s) 101, 1124
StyI CCWWGG 5 cut(s) 569, 791, 1263, 1392, 1533
TaaI ACNGT 7 cut(s) 51, 80, 132, 370, 458, 541, 1690
TaiI ACGT 2 cut(s) 24, 496
TaqI TCGA 5 cut(s) 675, 1294, 1481, 1581, 1675
TasI AATT 9 cut(s) 430, 438, 770, 802, 811, 875, 929, 1073, 1246
TauI GCSGC 2 cut(s) 1469, 1610
TfiI GAWTC 6 cut(s) 25, 672, 824, 979, 1105, 1421
Tru1I TTAA 4 cut(s) 564, 590, 849, 1065
Tru9I TTAA 4 cut(s) 564, 590, 849, 1065
TscAI CASTG 3 cut(s) 135, 198, 1686
TseFI GTSAC 5 cut(s) 153, 247, 297, 715, 1499
TseI GCWGC 2 cut(s) 695, 776
Tsp45I GTSAC 5 cut(s) 153, 247, 297, 715, 1499
TspDTI ATGAA 5 cut(s) 585, 1055, 1070, 1218, 1294
TspGWI ACGGA 4 cut(s) 502, 734, 875, 1374
TspRI CASTG 3 cut(s) 135, 198, 1686
XapI RAATTY 2 cut(s) 770, 802
XmiI GTMKAC 1 cut(s) 1130
XmnI GAANNNNTTC 1 cut(s) 1109
XspI CTAG 4 cut(s) 30, 149, 734, 1726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.