FvH4_4g36390

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000119
Physical Location & Seq
Reverse (-)
33348795 .. 33351587
2793 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g36390.t1

Sequence Viewer

Length: 1209 bp
ATGTCTAGTATGGTGAATGACGTCAATAGTCCTGAGGCGCAAGGACGTCCAATGCTTGGGAAACAAGAACTTGGAGAACTTCAAGCAAGCAACAAATGGAAATGGCCAGAAGTTGAGGAAATTCTTTCATATTTGAACCCGTGGTGGAATACGATACTGGTATCTTCTTGCGTGATTGCAGTTTTATTTGATCCTTTGTTCTTTTACATTCCACTCATCAAAGAGGAAGAGAAGTGCATGGGAATCGATAACCAAGCGAGGACTGCAGCTCTGGTTTTACGATCAGTCACGGACATCCCTTTCCTAGTGCATATCATATACAAACTTAATGATGCTATCACTGCAGCCTCAAAGGTTCCAAGGGATACAAATCCGAATTCGGAATCCGGATTAGTATCCCGTGTCCAGAATCTTCAGATGGTTCAGTTTGTTAAGGCATGCTCTCGCAAGTTGTCCTGGCGATCTTTCCTAACTGATGTTCTCGCAGTTTTCCCCATACCACAAATATATATAGCGAACGCAACTACCAAAGCGGAGGAGGCCAAAGCGGAGGAGGTAAGAGAGAAGTTTGAGACCAAAAGGCACGATATAGAAAACTGGATGACACAAAATGGTCTCGAGGAAGACATGAAGGCAGAGATCAGGAGAAACATCAAGCAAAAACTGGAAGAGGACATAAGTGTAGATCTGGATGATATTATTTCTATTCTTCCCTGGTATACCAGGAAACCTCTAAAGCGCGCTCTTTGCATGAATACGCTAAGAAGAGTACCCATGCTTAACAATATGGATGAGAAAGTCCTGAAATTGATGTGCGACTATCTGAAGCCGATGAAGTACCAAGAGAATCACCTGGTTTTTAAAATGGGAGACCCACTTGATCGAATGGTCTTCATTACAGAAGGGGTTATGTGGACTTACAAAGCTGCTACTGAGAGTACTGGAGAAGCAATAGGACTGCCTACTTCTGCATCCATCGACACCAACGTCCTCAAGAAGGGTGATTCTTATGGACACGAGCTTCTGCTTTATGCATCATCATATTATAAGATTCCTACCTCACCCAAAAATTTACTGTGTCACACAAAGGTAGAGGCGTTTGTTCTCATGGCCAACGACTTGACAGACATAGTAAATAAATGCAAAAGCAAAAAGTTGTGGTCTTTGGACAATGATGCTTCTAACGATGAGGCGAGGGATCGGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

403

Amino Acids

46.05

Weight (kDa)

5.9

Isoelectric Point (pI)

46.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1047
AasI GACNNNNNNGTC 1 cut(s) 986
AatII GACGTC 2 cut(s) 24, 49
AccB7I CCANNNNNTGG 1 cut(s) 56
AccI GTMKAC 1 cut(s) 719
AccII CGCG 1 cut(s) 741
AccIII TCCGGA 1 cut(s) 386
AciI CCGC 2 cut(s) 533, 548
AclWI GGATC 2 cut(s) 185, 1206
AcoI YGGCCR 2 cut(s) 104, 1110
AcsI RAATTY 3 cut(s) 120, 376, 1069
AcuI CTGAAG 2 cut(s) 398, 845
AcyI GRCGYC 2 cut(s) 21, 46
AfaI GTAC 3 cut(s) 771, 839, 940
AfiI CCNNNNNNNGG 2 cut(s) 56, 997
AgsI TTSAA 2 cut(s) 83, 136
AjnI CCWGG 4 cut(s) 455, 713, 722, 852
AluBI AGCT 3 cut(s) 269, 926, 1021
AluI AGCT 3 cut(s) 269, 926, 1021
Alw26I GTCTC 3 cut(s) 566, 620, 864
AlwI GGATC 2 cut(s) 185, 1206
Ama87I CYCGRG 1 cut(s) 617
Aor13HI TCCGGA 1 cut(s) 386
AoxI GGCC 3 cut(s) 104, 540, 1110
ApeKI GCWGC 3 cut(s) 266, 344, 926
ApoI RAATTY 3 cut(s) 120, 376, 1069
AspLEI GCGC 3 cut(s) 40, 741, 743
AsuHPI GGTGA 4 cut(s) 25, 842, 1013, 1053
AvaI CYCGRG 1 cut(s) 617
AxyI CCTNAGG 1 cut(s) 33
BalI TGGCCA 2 cut(s) 106, 1112
BauI CACGAG 1 cut(s) 1016
BbsI GAAGAC 2 cut(s) 630, 883
BbvI GCAGC 3 cut(s) 278, 356, 913
BccI CCATC 2 cut(s) 412, 983
BcgI CGANNNNNNTGC 2 cut(s) 226, 260
BciT130I CCWGG 4 cut(s) 457, 715, 724, 854
BciVI GTATCC 2 cut(s) 358, 406
BcoDI GTCTC 3 cut(s) 566, 620, 864
BfaI CTAG 2 cut(s) 6, 305
BfmI CTRYAG 2 cut(s) 264, 342
BfuI GTATCC 2 cut(s) 358, 406
BglII AGATCT 1 cut(s) 685
BisI GCNGC 3 cut(s) 267, 345, 927
BlsI GCNGC 3 cut(s) 268, 346, 928
BmcAI AGTACT 1 cut(s) 940
Bme1390I CCNGG 4 cut(s) 457, 715, 724, 854
BmeT110I CYCGRG 1 cut(s) 617
BmiI GGNNCC 1 cut(s) 357
BmrFI CCNGG 4 cut(s) 457, 715, 724, 854
BmsI GCATC 4 cut(s) 322, 980, 1043, 1165
BpiI GAAGAC 2 cut(s) 630, 883
BpmI CTGGAG 1 cut(s) 963
BpuEI CTTGAG 1 cut(s) 977
Bsa29I ATCGAT 1 cut(s) 246
BsaBI GATNNNNATC 2 cut(s) 369, 394
BsaHI GRCGYC 2 cut(s) 21, 46
BsaI GGTCTC 3 cut(s) 566, 620, 864
BsaJI CCNNGG 3 cut(s) 140, 359, 713
BsaWI WCCGGW 1 cut(s) 386
Bsc4I CCNNNNNNNGG 2 cut(s) 56, 997
Bse1I ACTGG 4 cut(s) 162, 602, 669, 946
Bse21I CCTNAGG 1 cut(s) 33
Bse8I GATNNNNATC 2 cut(s) 369, 394
BseAI TCCGGA 1 cut(s) 386
BseBI CCWGG 4 cut(s) 457, 715, 724, 854
BseCI ATCGAT 1 cut(s) 246
BseDI CCNNGG 3 cut(s) 140, 359, 713
BseGI GGATG 5 cut(s) 294, 606, 697, 796, 971
BseJI GATNNNNATC 2 cut(s) 369, 394
BseLI CCNNNNNNNGG 2 cut(s) 56, 997
BseMII CTCAG 2 cut(s) 24, 924
BseNI ACTGG 4 cut(s) 162, 602, 669, 946
BsePI GCGCGC 1 cut(s) 739
BseRI GAGGAG 2 cut(s) 551, 566
BseXI GCAGC 3 cut(s) 278, 356, 913
Bsh1236I CGCG 1 cut(s) 741
BshFI GGCC 3 cut(s) 106, 542, 1112
BshVI ATCGAT 1 cut(s) 246
BsiHKCI CYCGRG 1 cut(s) 617
BsiSI CCGG 1 cut(s) 387
BslI CCNNNNNNNGG 2 cut(s) 56, 997
BsmAI GTCTC 3 cut(s) 566, 620, 864
BsnI GGCC 3 cut(s) 106, 542, 1112
Bso31I GGTCTC 3 cut(s) 566, 620, 864
BsoBI CYCGRG 1 cut(s) 617
Bsp13I TCCGGA 1 cut(s) 386
Bsp143I GATC 7 cut(s) 190, 281, 461, 639, 685, 880, 1198
BspACI CCGC 2 cut(s) 533, 548
BspANI GGCC 3 cut(s) 106, 542, 1112
BspCNI CTCAG 2 cut(s) 25, 925
BspDI ATCGAT 1 cut(s) 246
BspEI TCCGGA 1 cut(s) 386
BspFNI CGCG 1 cut(s) 741
BspLI GGNNCC 1 cut(s) 357
BspMAI CTGCAG 2 cut(s) 268, 346
BspPI GGATC 2 cut(s) 185, 1206
BspTNI GGTCTC 3 cut(s) 566, 620, 864
BsrI ACTGG 4 cut(s) 162, 602, 669, 946
BssECI CCNNGG 3 cut(s) 140, 359, 713
BssHII GCGCGC 1 cut(s) 739
BssMI GATC 7 cut(s) 190, 281, 461, 639, 685, 880, 1198
BssNAI GTATAC 1 cut(s) 720
BssNI GRCGYC 2 cut(s) 21, 46
BssSI CACGAG 1 cut(s) 1016
BssT1I CCWWGG 1 cut(s) 359
Bst1107I GTATAC 1 cut(s) 720
Bst2BI CACGAG 1 cut(s) 1016
Bst2UI CCWGG 4 cut(s) 457, 715, 724, 854
Bst4CI ACNGT 1 cut(s) 1077
Bst6I CTCTTC 3 cut(s) 222, 663, 760
BstACI GRCGYC 2 cut(s) 21, 46
BstC8I GCNNGC 3 cut(s) 88, 439, 741
BstDEI CTNAG 3 cut(s) 33, 761, 933
BstDSI CCRYGG 1 cut(s) 140
BstENI CCTNNNNNAGG 1 cut(s) 995
BstF5I GGATG 5 cut(s) 294, 606, 697, 796, 971
BstFNI CGCG 1 cut(s) 741
BstHHI GCGC 3 cut(s) 40, 741, 743
BstKTI GATC 7 cut(s) 193, 284, 464, 642, 688, 883, 1201
BstMAI GTCTC 3 cut(s) 566, 620, 864
BstMBI GATC 7 cut(s) 190, 281, 461, 639, 685, 880, 1198
BstMWI GCNNNNNNNGC 4 cut(s) 263, 341, 539, 747
BstNI CCWGG 4 cut(s) 457, 715, 724, 854
BstNSI RCATGY 1 cut(s) 441
BstSCI CCNGG 4 cut(s) 455, 713, 722, 852
BstSFI CTRYAG 2 cut(s) 264, 342
BstUI CGCG 1 cut(s) 741
BstV1I GCAGC 3 cut(s) 278, 356, 913
BstV2I GAAGAC 2 cut(s) 630, 883
BstX2I RGATCY 1 cut(s) 685
BstYI RGATCY 1 cut(s) 685
BstZ17I GTATAC 1 cut(s) 720
Bsu15I ATCGAT 1 cut(s) 246
Bsu36I CCTNAGG 1 cut(s) 33
BsuI GTATCC 2 cut(s) 358, 406
BsuRI GGCC 3 cut(s) 106, 542, 1112
BsuTUI ATCGAT 1 cut(s) 246
BtgI CCRYGG 1 cut(s) 140
BtsCI GGATG 5 cut(s) 294, 606, 697, 796, 971
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 1 cut(s) 339
Cac8I GCNNGC 3 cut(s) 88, 439, 741
CfoI GCGC 3 cut(s) 40, 741, 743
ClaI ATCGAT 1 cut(s) 246
CsiI ACCWGGT 1 cut(s) 852
Csp6I GTAC 3 cut(s) 770, 838, 939
CviAII CATG 6 cut(s) 238, 438, 628, 751, 775, 1108
CviJI RGCY 8 cut(s) 106, 269, 347, 542, 829, 926, 1021, 1112
CviKI_1 RGCY 8 cut(s) 106, 269, 347, 542, 829, 926, 1021, 1112
CviQI GTAC 3 cut(s) 770, 838, 939
DdeI CTNAG 3 cut(s) 33, 761, 933
DpnI GATC 7 cut(s) 192, 283, 463, 641, 687, 882, 1200
DpnII GATC 7 cut(s) 190, 281, 461, 639, 685, 880, 1198
DraI TTTAAA 1 cut(s) 862
DrdI GACNNNNNNGTC 1 cut(s) 986
DseDI GACNNNNNNGTC 1 cut(s) 986
EaeI YGGCCR 2 cut(s) 104, 1110
Eam1104I CTCTTC 3 cut(s) 222, 663, 760
EarI CTCTTC 3 cut(s) 222, 663, 760
Eco130I CCWWGG 1 cut(s) 359
Eco31I GGTCTC 3 cut(s) 566, 620, 864
Eco57I CTGAAG 2 cut(s) 398, 845
Eco81I CCTNAGG 1 cut(s) 33
Eco88I CYCGRG 1 cut(s) 617
EcoNI CCTNNNNNAGG 1 cut(s) 995
EcoRI GAATTC 1 cut(s) 376
EcoRII CCWGG 4 cut(s) 455, 713, 722, 852
EcoT14I CCWWGG 1 cut(s) 359
EcoT22I ATGCAT 1 cut(s) 1036
ErhI CCWWGG 1 cut(s) 359
FaeI CATG 6 cut(s) 241, 441, 631, 754, 778, 1111
FatI CATG 6 cut(s) 237, 437, 627, 750, 774, 1107
FblI GTMKAC 1 cut(s) 719
Fnu4HI GCNGC 3 cut(s) 267, 345, 927
FokI GGATG 5 cut(s) 281, 613, 704, 803, 958
Fsp4HI GCNGC 3 cut(s) 267, 345, 927
FspBI CTAG 2 cut(s) 6, 305
GlaI GCGC 3 cut(s) 39, 740, 742
GluI GCNGC 3 cut(s) 267, 345, 927
GsuI CTGGAG 1 cut(s) 963
HaeIII GGCC 3 cut(s) 106, 542, 1112
HapII CCGG 1 cut(s) 387
HhaI GCGC 3 cut(s) 40, 741, 743
Hin1I GRCGYC 2 cut(s) 21, 46
Hin1II CATG 6 cut(s) 241, 441, 631, 754, 778, 1111
Hin6I GCGC 3 cut(s) 38, 739, 741
HinP1I GCGC 3 cut(s) 38, 739, 741
HinfI GANTC 6 cut(s) 243, 383, 409, 847, 1004, 1051
HpaII CCGG 1 cut(s) 387
HphI GGTGA 4 cut(s) 25, 842, 1013, 1053
Hpy166II GTNNAC 2 cut(s) 720, 915
Hpy188I TCNGA 4 cut(s) 375, 382, 417, 825
Hpy188III TCNNGA 8 cut(s) 32, 387, 406, 617, 643, 689, 802, 994
Hpy8I GTNNAC 2 cut(s) 720, 915
HpyAV CCTTC 3 cut(s) 625, 896, 991
HpyCH4III ACNGT 1 cut(s) 1077
HpyCH4IV ACGT 3 cut(s) 21, 46, 987
HpyCH4V TGCA 9 cut(s) 179, 237, 266, 310, 344, 750, 971, 1034, 1143
HpyF10VI GCNNNNNNNGC 4 cut(s) 263, 341, 539, 747
HpyF3I CTNAG 3 cut(s) 33, 761, 933
HpySE526I ACGT 3 cut(s) 21, 46, 987
Hsp92I GRCGYC 2 cut(s) 21, 46
Hsp92II CATG 6 cut(s) 241, 441, 631, 754, 778, 1111
HspAI GCGC 3 cut(s) 38, 739, 741
Kpn2I TCCGGA 1 cut(s) 386
Kzo9I GATC 7 cut(s) 190, 281, 461, 639, 685, 880, 1198
Lsp1109I GCAGC 3 cut(s) 278, 356, 913
LweI GCATC 4 cut(s) 322, 980, 1043, 1165
MabI ACCWGGT 1 cut(s) 852
MaeI CTAG 2 cut(s) 6, 305
MaeII ACGT 3 cut(s) 21, 46, 987
MaeIII GTNAC 2 cut(s) 286, 1079
MalI GATC 7 cut(s) 192, 283, 463, 641, 687, 882, 1200
MboI GATC 7 cut(s) 190, 281, 461, 639, 685, 880, 1198
MboII GAAGA 8 cut(s) 156, 239, 404, 635, 680, 701, 777, 883
MflI RGATCY 1 cut(s) 685
MlsI TGGCCA 2 cut(s) 106, 1112
MluCI AATT 4 cut(s) 120, 376, 806, 1069
MluNI TGGCCA 2 cut(s) 106, 1112
Mox20I TGGCCA 2 cut(s) 106, 1112
Mph1103I ATGCAT 1 cut(s) 1036
MroI TCCGGA 1 cut(s) 386
MscI TGGCCA 2 cut(s) 106, 1112
MseI TTAA 4 cut(s) 327, 432, 780, 861
Msp20I TGGCCA 2 cut(s) 106, 1112
MspI CCGG 1 cut(s) 387
MspR9I CCNGG 4 cut(s) 457, 715, 724, 854
MvaI CCWGG 4 cut(s) 457, 715, 724, 854
MvnI CGCG 1 cut(s) 741
MwoI GCNNNNNNNGC 4 cut(s) 263, 341, 539, 747
NdeII GATC 7 cut(s) 190, 281, 461, 639, 685, 880, 1198
NlaIII CATG 6 cut(s) 241, 441, 631, 754, 778, 1111
NlaIV GGNNCC 1 cut(s) 357
NmuCI GTSAC 2 cut(s) 286, 1079
NsiI ATGCAT 1 cut(s) 1036
NspI RCATGY 1 cut(s) 441
PaeI GCATGC 1 cut(s) 441
PaeR7I CTCGAG 1 cut(s) 617
PauI GCGCGC 1 cut(s) 739
PcsI WCGNNNNNNNCGW 1 cut(s) 984
PfeI GAWTC 6 cut(s) 243, 383, 409, 847, 1004, 1051
PflMI CCANNNNNTGG 1 cut(s) 56
PkrI GCNGC 3 cut(s) 268, 346, 928
PsiI TTATAA 1 cut(s) 1047
Psp6I CCWGG 4 cut(s) 455, 713, 722, 852
PspGI CCWGG 4 cut(s) 455, 713, 722, 852
PspN4I GGNNCC 1 cut(s) 357
PstI CTGCAG 2 cut(s) 268, 346
PsuI RGATCY 1 cut(s) 685
PteI GCGCGC 1 cut(s) 739
RsaI GTAC 3 cut(s) 771, 839, 940
RsaNI GTAC 3 cut(s) 770, 838, 939
SaqAI TTAA 4 cut(s) 327, 432, 780, 861
SatI GCNGC 3 cut(s) 267, 345, 927
Sau3AI GATC 7 cut(s) 190, 281, 461, 639, 685, 880, 1198
ScaI AGTACT 1 cut(s) 940
ScrFI CCNGG 4 cut(s) 457, 715, 724, 854
SexAI ACCWGGT 1 cut(s) 852
SfaNI GCATC 4 cut(s) 322, 980, 1043, 1165
SfcI CTRYAG 2 cut(s) 264, 342
Sfr274I CTCGAG 1 cut(s) 617
SlaI CTCGAG 1 cut(s) 617
SmlI CTYRAG 2 cut(s) 617, 992
SmoI CTYRAG 2 cut(s) 617, 992
SphI GCATGC 1 cut(s) 441
Sse9I AATT 4 cut(s) 120, 376, 806, 1069
SsiI CCGC 2 cut(s) 533, 548
SspMI CTAG 2 cut(s) 6, 305
StyD4I CCNGG 4 cut(s) 455, 713, 722, 852
StyI CCWWGG 1 cut(s) 359
TaaI ACNGT 1 cut(s) 1077
TaiI ACGT 3 cut(s) 24, 49, 990
TaqI TCGA 4 cut(s) 246, 618, 883, 978
TasI AATT 4 cut(s) 120, 376, 806, 1069
TatI WGTACW 1 cut(s) 938
TfiI GAWTC 6 cut(s) 243, 383, 409, 847, 1004, 1051
Tru1I TTAA 4 cut(s) 327, 432, 780, 861
Tru9I TTAA 4 cut(s) 327, 432, 780, 861
TscAI CASTG 1 cut(s) 346
TseFI GTSAC 2 cut(s) 286, 1079
TseI GCWGC 3 cut(s) 266, 344, 926
Tsp45I GTSAC 2 cut(s) 286, 1079
TspDTI ATGAA 5 cut(s) 117, 644, 767, 848, 883
TspGWI ACGGA 1 cut(s) 305
TspRI CASTG 1 cut(s) 346
Van91I CCANNNNNTGG 1 cut(s) 56
XagI CCTNNNNNAGG 1 cut(s) 995
XapI RAATTY 3 cut(s) 120, 376, 1069
XceI RCATGY 1 cut(s) 441
XhoI CTCGAG 1 cut(s) 617
XmiI GTMKAC 1 cut(s) 719
XspI CTAG 2 cut(s) 6, 305
ZraI GACGTC 2 cut(s) 22, 47
ZrmI AGTACT 1 cut(s) 940
Zsp2I ATGCAT 1 cut(s) 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.