pycom01g23110

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
20545326 .. 20548425
3100 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g23110.2

Sequence Viewer

Length: 1956 bp
ATGGCCAACAGAAGAGAAGCTTTAGATGTGGAGAACCAGGGAGAGGGTCGGAAACCAGGGACTACAACGAGATATGCCCCAGCAATGCGAATTCGTGATGAACAGAGGAAATTCCTTCTCAGATGGAGCATGATATTTGTAATGTCCTGTGTGTTTGCCGTCACATTAGATCCTCTGTTCTTTTACATTTTAATCATTGATCAAGACAAGAAGTGCCTTCAAATGGACAAAACGCTGAGCACTACTGTTCTTGTTTTGCGATCACTCACGGATTTCATTTTCTTTGTGCATTTTATATATAAAATTTACGACGTCTTTATAGTTCAAAAGAACAAACAGTTGACGGCTAATGAGGCCGCAGATACCCTGCAACTTGTGGCTTCGAGTACCCTGCAAACTGGAGGAAATTTGGATCGGAAATCAAAAAGAATATTGTTGTGGTCATCTCTTTCCATTATAAATGATTTTCTTGCTCTTCTTCCCGTCCCACAACTGTTAATTGTAATTGCTTTTTACAAAATGAGAGCTGCTGGATATATGGAACATAAAAAGGCTCTGAATGTCTTCCTTCTTGGTCAATATCTACCAAGGATATTTCGAATTCACCAGTCATCCAAGGAACTTCGAGAGAATGCTGGACCATGGGTTAGAGGTCTATTCAATTTTTTTCTCTACATTCTTGCCAGTCATATACTTGGAGCTTTTTGGTATTTCTTTTCTATTCAACGAGAGACATCATGCTGGTACAGTGCATGTACAAATCATAATCTTGATCCTGCTGGATGTATGAATACTTTCTACTGCGGGCATCGAACTACTGCTTTGAGAAATATTACACTTCTAAACGAGCGTTGCAGGCTAGATACTCCAGATGGTGCTTCAGCACCATTTAATTTTGGAATATTTCTTGATTCTCTTAAGAATCATAACAAGCATATCCATTTTAGAAAGAAGTTCCTTTACTCTTTCTGGTGGGGCTTGCGAAATATAAGTAATTTTGGAACGAATCTGACAACAAGCACTTATGTCTGGGAAAACTTGTTTGCAATTCTTATCTCCATCATTGGCTTGCTACTGTTCTTATATCTTATCGGAAATGTGCAGAATTTAATGCTGAAAGAAGCTACAAAAACAAAAGAGGAAACACAGATAAATCAGGTGAAGATGCTGTTAGAAGCTACAAAGATAATTCAGGCGAAGATGCTGAAAGAAGCTACAAAAATAAAAGAGGAGGAAAGACAGATAATTCAGGTGAAGATGCTGGGTGTACGCAAGTGGATATTCGAAAATAAATTCCCTGATCATATTAAGAACGAAATCGTGAATAGCATTGAGCAAACATTGAGAAAAAACAAAGATGCTGATGTTGACAAGCCATTCCTTATTCTTCCCTGGCAAACCAAAAGATCTGTAAAACGCCATCTTTTCATGGATACACTAAAAACAGTAAACAAGCTTAAAGACATGGATGAAAGAGTGTTGACATTGATGTGCGACTACCTGAAGCCAGTGACATACATTGAGAACAGCTTTGTTTTCCGAATGGGAGATCCGCTCGATTGCATGTTGTTCATTATCGAAGGAACAATTTGGACCTACACGTCGAAGGATAGTCAAGTTGGGAATGGAATCTCATCAATGGTCACCAAGCCCCTCAGGAAAGGTCACTTTTACGGGGAAGAGCTTCTCGATTGGGCATCAGAGAGTTTCACCGAACTTCCTGTCTCCAGCAAACATGTCAAAAGTCAGACAAAAGTAGAAGCATTTGTGCTCATGGCGAAGGACTTGGAAACTGTAGTCTCCAGAAGCAAACCATCTTGGCATTTGCTCAAGTGTAACAATCCTGGAGAGGTGGCAATTTCTACCTTACGTCGTTTCCGACCACGCCCGCCCCTATTCCCGGCTGGAACAGCGGATGCCAATGGTGGGAGCTTGCCATCGGCAGCAGGCAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

652

Amino Acids

75.08

Weight (kDa)

9.48

Isoelectric Point (pI)

45.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 458
AasI GACNNNNNNGTC 1 cut(s) 1600
AatII GACGTC 1 cut(s) 315
AccBSI CCGCTC 1 cut(s) 1555
AciI CCGC 5 cut(s) 357, 804, 1553, 1889, 1913
AclWI GGATC 4 cut(s) 164, 420, 767, 1544
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 7 cut(s) 90, 110, 303, 406, 600, 1105, 1292
AcuI CTGAAG 2 cut(s) 864, 1523
AcyI GRCGYC 1 cut(s) 312
AfaI GTAC 4 cut(s) 388, 746, 757, 1269
AfiI CCNNNNNNNGG 4 cut(s) 43, 223, 1900, 1926
AflII CTTAAG 1 cut(s) 917
AflIII ACRYGT 2 cut(s) 1599, 1735
AgsI TTSAA 4 cut(s) 221, 326, 661, 725
AjiI CACGTC 1 cut(s) 1602
AjnI CCWGG 4 cut(s) 36, 55, 1391, 1843
Alw21I GWGCWC 2 cut(s) 242, 1773
Alw26I GTCTC 3 cut(s) 725, 1729, 1804
AlwI GGATC 4 cut(s) 164, 420, 767, 1544
AoxI GGCC 2 cut(s) 3, 354
ApeKI GCWGC 2 cut(s) 527, 1943
ApoI RAATTY 7 cut(s) 90, 110, 303, 406, 600, 1105, 1292
ArsI GACNNNNNNTTYG 2 cut(s) 1707, 1739
Asp700I GAANNNNTTC 3 cut(s) 563, 794, 1683
AspS9I GGNCC 2 cut(s) 638, 1593
AsuC2I CCSGG 1 cut(s) 1901
AsuHPI GGTGA 5 cut(s) 596, 1171, 1264, 1636, 1702
AsuII TTCGAA 2 cut(s) 598, 1284
AvaII GGWCC 2 cut(s) 638, 1593
AxyI CCTNAGG 1 cut(s) 1655
BalI TGGCCA 1 cut(s) 5
BarI GAAGNNNNNNTAC 2 cut(s) 944, 976
BbsI GAAGAC 1 cut(s) 556
Bbv12I GWGCWC 2 cut(s) 242, 1773
BbvI GCAGC 1 cut(s) 514
BccI CCATC 6 cut(s) 117, 866, 1067, 1428, 1822, 1945
BceAI ACGGC 2 cut(s) 143, 360
BcgI CGANNNNNNTGC 2 cut(s) 373, 407
BciT130I CCWGG 4 cut(s) 38, 57, 1393, 1845
BciVI GTATCC 1 cut(s) 1426
BclI TGATCA 2 cut(s) 199, 1300
BcnI CCSGG 1 cut(s) 1901
BcoDI GTCTC 3 cut(s) 725, 1729, 1804
BfaI CTAG 1 cut(s) 860
BfmI CTRYAG 1 cut(s) 1794
BfrI CTTAAG 1 cut(s) 917
BfuI GTATCC 1 cut(s) 1426
BglII AGATCT 1 cut(s) 1406
BisI GCNGC 3 cut(s) 357, 528, 1944
BlpI GCTNAGC 1 cut(s) 236
BlsI GCNGC 3 cut(s) 358, 529, 1945
Bme1390I CCNGG 5 cut(s) 38, 57, 1393, 1845, 1901
Bme18I GGWCC 2 cut(s) 638, 1593
BmgBI CACGTC 1 cut(s) 1602
BmgT120I GGNCC 2 cut(s) 638, 1593
BmrFI CCNGG 5 cut(s) 38, 57, 1393, 1845, 1901
BmsI GCATC 7 cut(s) 817, 1155, 1191, 1248, 1348, 1706, 1906
BpiI GAAGAC 1 cut(s) 556
BplI GAGNNNNNCTC 2 cut(s) 1539, 1571
BpmI CTGGAG 5 cut(s) 420, 852, 1711, 1786, 1866
Bpu1102I GCTNAGC 1 cut(s) 236
Bpu14I TTCGAA 2 cut(s) 598, 1284
BpuEI CTTGAG 1 cut(s) 1814
BpuMI CCSGG 1 cut(s) 1901
BsaHI GRCGYC 1 cut(s) 312
BsaJI CCNNGG 6 cut(s) 37, 56, 587, 615, 641, 1391
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 223, 1900, 1926
Bse1I ACTGG 4 cut(s) 403, 607, 684, 1508
Bse21I CCTNAGG 1 cut(s) 1655
Bse3DI GCAATG 1 cut(s) 90
BseBI CCWGG 4 cut(s) 38, 57, 1393, 1845
BseDI CCNNGG 6 cut(s) 37, 56, 587, 615, 641, 1391
BseGI GGATG 4 cut(s) 611, 788, 1474, 1921
BseLI CCNNNNNNNGG 4 cut(s) 43, 223, 1900, 1926
BseMI GCAATG 1 cut(s) 90
BseMII CTCAG 3 cut(s) 133, 227, 1669
BseNI ACTGG 4 cut(s) 403, 607, 684, 1508
BseRI GAGGAG 1 cut(s) 1244
BseXI GCAGC 1 cut(s) 514
BseYI CCCAGC 2 cut(s) 79, 1261
BsgI GTGCAG 1 cut(s) 1121
BshFI GGCC 2 cut(s) 5, 356
BsiHKAI GWGCWC 2 cut(s) 242, 1773
BsiSI CCGG 1 cut(s) 1901
BslFI GGGAC 2 cut(s) 73, 470
BslI CCNNNNNNNGG 4 cut(s) 43, 223, 1900, 1926
BsmAI GTCTC 3 cut(s) 725, 1729, 1804
BsmFI GGGAC 2 cut(s) 73, 470
BsmI GAATGC 1 cut(s) 637
BsnI GGCC 2 cut(s) 5, 356
Bsp119I TTCGAA 2 cut(s) 598, 1284
Bsp1286I GDGCHC 2 cut(s) 242, 1773
Bsp1407I TGTACA 1 cut(s) 755
Bsp143I GATC 8 cut(s) 169, 199, 260, 412, 772, 1300, 1406, 1549
Bsp1720I GCTNAGC 1 cut(s) 236
Bsp19I CCATGG 1 cut(s) 641
BspACI CCGC 5 cut(s) 357, 804, 1553, 1889, 1913
BspANI GGCC 2 cut(s) 5, 356
BspCNI CTCAG 3 cut(s) 132, 228, 1668
BspPI GGATC 4 cut(s) 164, 420, 767, 1544
BspQI GCTCTTC 2 cut(s) 480, 1674
BspT104I TTCGAA 2 cut(s) 598, 1284
BspTI CTTAAG 1 cut(s) 917
BsrBI CCGCTC 1 cut(s) 1555
BsrDI GCAATG 1 cut(s) 90
BsrGI TGTACA 1 cut(s) 755
BsrI ACTGG 4 cut(s) 403, 607, 684, 1508
BssECI CCNNGG 6 cut(s) 37, 56, 587, 615, 641, 1391
BssMI GATC 8 cut(s) 169, 199, 260, 412, 772, 1300, 1406, 1549
BssNI GRCGYC 1 cut(s) 312
BssT1I CCWWGG 3 cut(s) 587, 615, 641
Bst2UI CCWGG 4 cut(s) 38, 57, 1393, 1845
Bst4CI ACNGT 7 cut(s) 247, 339, 495, 749, 1077, 1447, 1795
Bst6I CTCTTC 3 cut(s) 7, 480, 1674
BstACI GRCGYC 1 cut(s) 312
BstAFI CTTAAG 1 cut(s) 917
BstAUI TGTACA 1 cut(s) 755
BstBI TTCGAA 2 cut(s) 598, 1284
BstC8I GCNNGC 7 cut(s) 806, 857, 980, 1070, 1889, 1934, 1948
BstDEI CTNAG 3 cut(s) 119, 236, 1655
BstDSI CCRYGG 1 cut(s) 641
BstEII GGTNACC 1 cut(s) 1642
BstF5I GGATG 4 cut(s) 611, 788, 1474, 1921
BstKTI GATC 8 cut(s) 172, 202, 263, 415, 775, 1303, 1409, 1552
BstMAI GTCTC 3 cut(s) 725, 1729, 1804
BstMBI GATC 8 cut(s) 169, 199, 260, 412, 772, 1300, 1406, 1549
BstMWI GCNNNNNNNGC 3 cut(s) 353, 856, 1910
BstNI CCWGG 4 cut(s) 38, 57, 1393, 1845
BstNSI RCATGY 3 cut(s) 756, 1567, 1739
BstPI GGTNACC 1 cut(s) 1642
BstSCI CCNGG 5 cut(s) 36, 55, 1391, 1843, 1899
BstSFI CTRYAG 1 cut(s) 1794
BstV1I GCAGC 1 cut(s) 514
BstV2I GAAGAC 1 cut(s) 556
BstX2I RGATCY 3 cut(s) 169, 1406, 1549
BstYI RGATCY 3 cut(s) 169, 1406, 1549
Bsu36I CCTNAGG 1 cut(s) 1655
BsuI GTATCC 1 cut(s) 1426
BsuRI GGCC 2 cut(s) 5, 356
BtgI CCRYGG 1 cut(s) 641
BtrI CACGTC 1 cut(s) 1602
BtsCI GGATG 4 cut(s) 611, 788, 1474, 1921
BtsIMutI CAGTG 2 cut(s) 754, 1515
Cac8I GCNNGC 7 cut(s) 806, 857, 980, 1070, 1889, 1934, 1948
Cfr13I GGNCC 2 cut(s) 638, 1593
Csp6I GTAC 4 cut(s) 387, 745, 756, 1268
CviAII CATG 9 cut(s) 130, 642, 738, 753, 1429, 1465, 1564, 1736, 1774
CviQI GTAC 4 cut(s) 387, 745, 756, 1268
DdeI CTNAG 3 cut(s) 119, 236, 1655
DpnI GATC 8 cut(s) 171, 201, 262, 414, 774, 1302, 1408, 1551
DpnII GATC 8 cut(s) 169, 199, 260, 412, 772, 1300, 1406, 1549
DrdI GACNNNNNNGTC 1 cut(s) 1600
DseDI GACNNNNNNGTC 1 cut(s) 1600
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 7, 480, 1674
EarI CTCTTC 3 cut(s) 7, 480, 1674
Eco130I CCWWGG 3 cut(s) 587, 615, 641
Eco47I GGWCC 2 cut(s) 638, 1593
Eco57I CTGAAG 2 cut(s) 864, 1523
Eco81I CCTNAGG 1 cut(s) 1655
Eco91I GGTNACC 1 cut(s) 1642
EcoO65I GGTNACC 1 cut(s) 1642
EcoRI GAATTC 2 cut(s) 90, 600
EcoRII CCWGG 4 cut(s) 36, 55, 1391, 1843
EcoT14I CCWWGG 3 cut(s) 587, 615, 641
ErhI CCWWGG 3 cut(s) 587, 615, 641
FaeI CATG 9 cut(s) 133, 645, 741, 756, 1432, 1468, 1567, 1739, 1777
FalI AAGNNNNNCTT 1 cut(s) 36
FaqI GGGAC 2 cut(s) 73, 470
FatI CATG 9 cut(s) 129, 641, 737, 752, 1428, 1464, 1563, 1735, 1773
FauI CCCGC 2 cut(s) 797, 1896
FbaI TGATCA 2 cut(s) 199, 1300
Fnu4HI GCNGC 3 cut(s) 357, 528, 1944
FokI GGATG 4 cut(s) 598, 795, 1481, 1928
Fsp4HI GCNGC 3 cut(s) 357, 528, 1944
FspBI CTAG 1 cut(s) 860
GluI GCNGC 3 cut(s) 357, 528, 1944
GsaI CCCAGC 2 cut(s) 83, 1265
GsuI CTGGAG 5 cut(s) 420, 852, 1711, 1786, 1866
HaeIII GGCC 2 cut(s) 5, 356
HapII CCGG 1 cut(s) 1901
Hin1I GRCGYC 1 cut(s) 312
Hin1II CATG 9 cut(s) 133, 645, 741, 756, 1432, 1468, 1567, 1739, 1777
HincII GTYRAC 3 cut(s) 342, 1369, 1482
HindII GTYRAC 3 cut(s) 342, 1369, 1482
HindIII AAGCTT 2 cut(s) 18, 1454
HinfI GANTC 4 cut(s) 911, 922, 1006, 1629
HpaII CCGG 1 cut(s) 1901
HphI GGTGA 5 cut(s) 596, 1171, 1264, 1636, 1702
Hpy166II GTNNAC 5 cut(s) 342, 1268, 1369, 1450, 1482
Hpy8I GTNNAC 5 cut(s) 342, 1268, 1369, 1450, 1482
Hpy99I CGWCG 3 cut(s) 314, 1606, 1875
HpyAV CCTTC 6 cut(s) 125, 227, 578, 1574, 1600, 1774
HpyCH4III ACNGT 7 cut(s) 247, 339, 495, 749, 1077, 1447, 1795
HpyCH4IV ACGT 3 cut(s) 312, 1601, 1870
HpyCH4V TGCA 8 cut(s) 289, 370, 394, 752, 855, 1046, 1102, 1563
HpyF10VI GCNNNNNNNGC 3 cut(s) 353, 856, 1910
HpyF3I CTNAG 3 cut(s) 119, 236, 1655
HpySE526I ACGT 3 cut(s) 312, 1601, 1870
Hsp92I GRCGYC 1 cut(s) 312
Hsp92II CATG 9 cut(s) 133, 645, 741, 756, 1432, 1468, 1567, 1739, 1777
Ksp22I TGATCA 2 cut(s) 199, 1300
Kzo9I GATC 8 cut(s) 169, 199, 260, 412, 772, 1300, 1406, 1549
LguI GCTCTTC 2 cut(s) 480, 1674
LmnI GCTCC 3 cut(s) 126, 698, 1929
Lsp1109I GCAGC 1 cut(s) 514
LweI GCATC 7 cut(s) 817, 1155, 1191, 1248, 1348, 1706, 1906
MaeI CTAG 1 cut(s) 860
MaeII ACGT 3 cut(s) 312, 1601, 1870
MaeIII GTNAC 5 cut(s) 160, 1510, 1642, 1664, 1835
MalI GATC 8 cut(s) 171, 201, 262, 414, 774, 1302, 1408, 1551
MbiI CCGCTC 1 cut(s) 1555
MboI GATC 8 cut(s) 169, 199, 260, 412, 772, 1300, 1406, 1549
MboII GAAGA 9 cut(s) 24, 467, 470, 556, 1174, 1210, 1267, 1379, 1691
MflI RGATCY 3 cut(s) 169, 1406, 1549
MhlI GDGCHC 2 cut(s) 242, 1773
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 2 cut(s) 29, 1903
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 3 cut(s) 563, 794, 1683
MscI TGGCCA 1 cut(s) 5
MseI TTAA 7 cut(s) 191, 497, 891, 918, 1109, 1308, 1458
MslI CAYNNNNRTG 1 cut(s) 1489
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1913
MspCI CTTAAG 1 cut(s) 917
MspI CCGG 1 cut(s) 1901
MspR9I CCNGG 5 cut(s) 38, 57, 1393, 1845, 1901
Mva1269I GAATGC 1 cut(s) 637
MvaI CCWGG 4 cut(s) 38, 57, 1393, 1845
MwoI GCNNNNNNNGC 3 cut(s) 353, 856, 1910
NciI CCSGG 1 cut(s) 1901
NcoI CCATGG 1 cut(s) 641
NdeII GATC 8 cut(s) 169, 199, 260, 412, 772, 1300, 1406, 1549
NlaIII CATG 9 cut(s) 133, 645, 741, 756, 1432, 1468, 1567, 1739, 1777
NmuCI GTSAC 4 cut(s) 160, 1510, 1642, 1664
NspI RCATGY 3 cut(s) 756, 1567, 1739
NspV TTCGAA 2 cut(s) 598, 1284
PciI ACATGT 1 cut(s) 1735
PciSI GCTCTTC 2 cut(s) 480, 1674
PcsI WCGNNNNNNNCGW 1 cut(s) 1876
PctI GAATGC 1 cut(s) 637
PdmI GAANNNNTTC 3 cut(s) 563, 794, 1683
PfeI GAWTC 4 cut(s) 911, 922, 1006, 1629
PfoI TCCNGGA 1 cut(s) 1843
PkrI GCNGC 3 cut(s) 358, 529, 1945
PscI ACATGT 1 cut(s) 1735
PsiI TTATAA 1 cut(s) 458
Psp6I CCWGG 4 cut(s) 36, 55, 1391, 1843
PspEI GGTNACC 1 cut(s) 1642
PspFI CCCAGC 2 cut(s) 79, 1261
PspGI CCWGG 4 cut(s) 36, 55, 1391, 1843
PspPI GGNCC 2 cut(s) 638, 1593
PsuI RGATCY 3 cut(s) 169, 1406, 1549
RsaI GTAC 4 cut(s) 388, 746, 757, 1269
RsaNI GTAC 4 cut(s) 387, 745, 756, 1268
RseI CAYNNNNRTG 1 cut(s) 1489
SapI GCTCTTC 2 cut(s) 480, 1674
SaqAI TTAA 7 cut(s) 191, 497, 891, 918, 1109, 1308, 1458
SatI GCNGC 3 cut(s) 357, 528, 1944
Sau3AI GATC 8 cut(s) 169, 199, 260, 412, 772, 1300, 1406, 1549
Sau96I GGNCC 2 cut(s) 638, 1593
ScrFI CCNGG 5 cut(s) 38, 57, 1393, 1845, 1901
SduI GDGCHC 2 cut(s) 242, 1773
SfaNI GCATC 7 cut(s) 817, 1155, 1191, 1248, 1348, 1706, 1906
SfcI CTRYAG 1 cut(s) 1794
SfuI TTCGAA 2 cut(s) 598, 1284
SinI GGWCC 2 cut(s) 638, 1593
SmiMI CAYNNNNRTG 1 cut(s) 1489
SmlI CTYRAG 2 cut(s) 917, 1829
SmoI CTYRAG 2 cut(s) 917, 1829
SsiI CCGC 5 cut(s) 357, 804, 1553, 1889, 1913
SspI AATATT 3 cut(s) 432, 832, 903
SspMI CTAG 1 cut(s) 860
StyD4I CCNGG 5 cut(s) 36, 55, 1391, 1843, 1899
StyI CCWWGG 3 cut(s) 587, 615, 641
TaaI ACNGT 7 cut(s) 247, 339, 495, 749, 1077, 1447, 1795
TaiI ACGT 3 cut(s) 315, 1604, 1873
TaqI TCGA 9 cut(s) 383, 598, 625, 811, 1284, 1557, 1578, 1604, 1689
TatI WGTACW 1 cut(s) 755
TauI GCSGC 1 cut(s) 359
TfiI GAWTC 4 cut(s) 911, 922, 1006, 1629
Tru1I TTAA 7 cut(s) 191, 497, 891, 918, 1109, 1308, 1458
Tru9I TTAA 7 cut(s) 191, 497, 891, 918, 1109, 1308, 1458
TscAI CASTG 2 cut(s) 754, 1515
TseFI GTSAC 4 cut(s) 160, 1510, 1642, 1664
TseI GCWGC 2 cut(s) 527, 1943
Tsp45I GTSAC 4 cut(s) 160, 1510, 1642, 1664
TspDTI ATGAA 6 cut(s) 114, 265, 803, 1417, 1485, 1561
TspGWI ACGGA 1 cut(s) 284
TspRI CASTG 2 cut(s) 754, 1515
Vha464I CTTAAG 1 cut(s) 917
VpaK11BI GGWCC 2 cut(s) 638, 1593
XapI RAATTY 7 cut(s) 90, 110, 303, 406, 600, 1105, 1292
XceI RCATGY 3 cut(s) 756, 1567, 1739
XmnI GAANNNNTTC 3 cut(s) 563, 794, 1683
XspI CTAG 1 cut(s) 860
ZraI GACGTC 1 cut(s) 313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.