pycom07g26510

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000119
Physical Location & Seq
Reverse (-)
26510082 .. 26512730
2649 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g26510.2

Sequence Viewer

Length: 1725 bp
ATGATTCTGATGAGTGCAATTTGTTCTTTTTCTGTTGTTTCAAGATCTGTTACAGGACAGCGCAAACCAGCGATTACAATGGCATTAGATGCCCTAATAAAGGGAATGCGGGATGAACAAGGGAACTTACTTCCCAAGTGGAGTATGATATTTGTTATGTCATGTGTGTTTGCCGTCTCACTAGATCCTCTATTCTTTTACATTTTAATCATTGATCAAGATAACAAGTGTCTTCAAATGGACAAAAAGCTAAGAACTATTGTTCTTGTGTTGCGATCACTCACGGATACCATTTTCGCTGTGCCCTTTATATATAAAATTTACAATGGTGTTAAAGTTGAAATGCACAAAAATTTGAGGACTAATGTGGCTGCAAATACCACGAGAAATTTGTTTCGGGAATCAAAAAGAGAAGTGTTGATTGAAGGTGGCAAGAAAATTACTCAGAAGATGTCGTGGTTATCTTTCTCCATCATAAATGATTTTCTAGCTCTTCTTCCCGTCCCACAACTGCTAATATTAGTTGCTTTTTACAATATGAGAGGAGCTGGATATGTGGAACATAAAAAGGTTCTTAATATCTTCCTTCTTGGTCAATATCTACCAAGGATATATCGAATTCACTGGTCGTCCAATGAACTTCGAAGGACTGCTGGAATATGGGTTAAGGGTCTATTCAATTTTTTTCTCTACATTCTTGCCAGTCACTTCTTTTCTATTGAACGAGAGACATCATGTTGGCACAATGCCTGTGCAAAACATAGTCCAGATCCTATAGGATGTACGAATACTTTCTATTGTGGGCGTCGAACTACTACTTCGAGAAATATAACATTTCTAAACGAGCATTGCCCGTTAGATACTCCAGATGGTGCCTTACCATTATCTAATTTTGGAATATTTCTCGATTCCCTTAAGAATCATAACTCAGAGCATACAAAGTTCGGAAAGAAGTTCTTTTACTCTTTCTGGTGGGGCTTGCGAAATCTAAGGTTAAAAACTTTAATACAGTTGGAAGCTGAAAAATCAGAAGAGATAAGACAGAAGATTGAGGTGAAGCAGCTGGGCGTAAACCAGTGGATAGCCGAAAATAAATTCCCTGATGATATCAAGAAATCAATCAATCATAGCATAGAGCAAGCATTGAAAAAAGACAAAGATGCTGATGTCCAGAACCCATTCCTTATTCTTCCCTGGAAAACCAAAAGATCTGTAAAACGTCATCTTCTCATGGATGCACTTAGAACAGTAAAAAAGCCTAAATACATGGATGAATATATGTTGACGTTGATGTGCGAATATCTGAAATCAGTGACATACATTGAGAACACCTTCGTTTTTCGAACAGGAGATCCACTCGATTGTATGCTATTCATTATCAAAGGGACAATGTGGACCTACACATCGAGTGATAGTCAAGCTGGGCAAGGAATCTCATCAATGGCCACCAAGCACCTCGGGAAAGGTCACTTTTACGGGGAAGAGCTTCTTGATTGGGCATCAGACAGTTTCGCCAAAGTTCCAGTCTCCAGCAAACATGTCAAAACTCAAACAAAAGTAGAAGCATTTGTGCTCATGGCCAAGGACTTGGCAACAGTAGTCTCCAGATGCGAGTTGGCACGTCATACTGTTCGTCGTTTCATTACCAAAACGCAACGACGTCCTCCCCACTCCCCGGCTGAAATAGGGGGTGACAAGATCTTGCCATTTACAGCAGGCAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

575

Amino Acids

65.98

Weight (kDa)

9.57

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1663
AccB1I GGYRCC 1 cut(s) 872
AciI CCGC 1 cut(s) 109
AclWI GGATC 3 cut(s) 179, 764, 1346
AcoI YGGCCR 2 cut(s) 1443, 1578
AcsI RAATTY 5 cut(s) 318, 352, 388, 618, 1094
AcyI GRCGYC 2 cut(s) 805, 1660
AfaI GTAC 1 cut(s) 784
AfiI CCNNNNNNNGG 2 cut(s) 100, 1675
AflII CTTAAG 1 cut(s) 914
AflIII ACRYGT 1 cut(s) 1537
AgsI TTSAA 7 cut(s) 42, 236, 341, 425, 679, 722, 1147
AjiI CACGTC 1 cut(s) 1622
AjnI CCWGG 1 cut(s) 1193
AloI GAACNNNNNNTCC 2 cut(s) 1336, 1368
AluBI AGCT 7 cut(s) 250, 491, 548, 1019, 1063, 1421, 1486
AluI AGCT 7 cut(s) 250, 491, 548, 1019, 1063, 1421, 1486
Alw21I GWGCWC 1 cut(s) 1575
Alw26I GTCTC 4 cut(s) 181, 722, 1531, 1606
AlwI GGATC 3 cut(s) 179, 764, 1346
Ama87I CYCGRG 1 cut(s) 1457
AoxI GGCC 2 cut(s) 1443, 1578
ApeKI GCWGC 2 cut(s) 371, 1060
ApoI RAATTY 5 cut(s) 318, 352, 388, 618, 1094
ArsI GACNNNNNNTTYG 2 cut(s) 1509, 1541
Asp700I GAANNNNTTC 4 cut(s) 791, 1178, 1331, 1485
AspLEI GCGC 1 cut(s) 63
AspS9I GGNCC 1 cut(s) 1395
AsuC2I CCSGG 1 cut(s) 1676
AsuHPI GGTGA 2 cut(s) 1066, 1703
AsuII TTCGAA 2 cut(s) 643, 1342
AvaI CYCGRG 1 cut(s) 1457
AvaII GGWCC 1 cut(s) 1395
BaeGI GKGCMC 1 cut(s) 306
BalI TGGCCA 2 cut(s) 1445, 1580
BanI GGYRCC 1 cut(s) 872
BarI GAAGNNNNNNTAC 2 cut(s) 944, 976
BauI CACGAG 1 cut(s) 382
BbsI GAAGAC 1 cut(s) 224
Bbv12I GWGCWC 1 cut(s) 1575
BbvI GCAGC 2 cut(s) 358, 1072
BccI CCATC 2 cut(s) 479, 863
BceAI ACGGC 1 cut(s) 158
BciT130I CCWGG 1 cut(s) 1195
BciVI GTATCC 1 cut(s) 280
BclI TGATCA 1 cut(s) 214
BcnI CCSGG 1 cut(s) 1676
BcoDI GTCTC 4 cut(s) 181, 722, 1531, 1606
BfaI CTAG 2 cut(s) 182, 488
BfmI CTRYAG 1 cut(s) 774
BfrI CTTAAG 1 cut(s) 914
BfuI GTATCC 1 cut(s) 280
BglII AGATCT 3 cut(s) 44, 1208, 1698
BisI GCNGC 2 cut(s) 372, 1061
BlsI GCNGC 2 cut(s) 373, 1062
Bme1390I CCNGG 2 cut(s) 1195, 1676
Bme18I GGWCC 1 cut(s) 1395
BmeT110I CYCGRG 1 cut(s) 1457
BmgBI CACGTC 1 cut(s) 1622
BmgT120I GGNCC 1 cut(s) 1395
BmiI GGNNCC 1 cut(s) 874
BmrFI CCNGG 2 cut(s) 1195, 1676
BmsI GCATC 5 cut(s) 79, 1150, 1225, 1508, 1598
BpiI GAAGAC 1 cut(s) 224
BplI GAGNNNNNCTC 2 cut(s) 1341, 1373
BpmI CTGGAG 3 cut(s) 849, 1513, 1588
Bpu14I TTCGAA 2 cut(s) 643, 1342
BpuMI CCSGG 1 cut(s) 1676
BsaHI GRCGYC 2 cut(s) 805, 1660
BsaJI CCNNGG 5 cut(s) 605, 1193, 1456, 1581, 1674
Bsc4I CCNNNNNNNGG 2 cut(s) 100, 1675
Bse1I ACTGG 4 cut(s) 629, 702, 1075, 1523
Bse3DI GCAATG 1 cut(s) 847
BseBI CCWGG 1 cut(s) 1195
BseDI CCNNGG 5 cut(s) 605, 1193, 1456, 1581, 1674
BseGI GGATG 4 cut(s) 118, 785, 1240, 1276
BseLI CCNNNNNNNGG 2 cut(s) 100, 1675
BseMI GCAATG 1 cut(s) 847
BseMII CTCAG 2 cut(s) 458, 942
BseNI ACTGG 4 cut(s) 629, 702, 1075, 1523
BseRI GAGGAG 1 cut(s) 558
BseSI GKGCMC 1 cut(s) 306
BseXI GCAGC 2 cut(s) 358, 1072
BseYI CCCAGC 2 cut(s) 1063, 1421
BshFI GGCC 2 cut(s) 1445, 1580
BshNI GGYRCC 1 cut(s) 872
BsiHKAI GWGCWC 1 cut(s) 1575
BsiHKCI CYCGRG 1 cut(s) 1457
BsiSI CCGG 1 cut(s) 1676
BslFI GGGAC 2 cut(s) 488, 1399
BslI CCNNNNNNNGG 2 cut(s) 100, 1675
BsmAI GTCTC 4 cut(s) 181, 722, 1531, 1606
BsmBI CGTCTC 1 cut(s) 181
BsmFI GGGAC 2 cut(s) 488, 1399
BsmI GAATGC 1 cut(s) 111
BsnI GGCC 2 cut(s) 1445, 1580
BsoBI CYCGRG 1 cut(s) 1457
Bsp119I TTCGAA 2 cut(s) 643, 1342
Bsp1286I GDGCHC 2 cut(s) 306, 1575
Bsp143I GATC 8 cut(s) 44, 184, 214, 275, 769, 1208, 1351, 1698
BspACI CCGC 1 cut(s) 109
BspANI GGCC 2 cut(s) 1445, 1580
BspCNI CTCAG 2 cut(s) 457, 941
BspLI GGNNCC 1 cut(s) 874
BspPI GGATC 3 cut(s) 179, 764, 1346
BspQI GCTCTTC 2 cut(s) 498, 1476
BspT104I TTCGAA 2 cut(s) 643, 1342
BspT107I GGYRCC 1 cut(s) 872
BspTI CTTAAG 1 cut(s) 914
BsrDI GCAATG 1 cut(s) 847
BsrI ACTGG 4 cut(s) 629, 702, 1075, 1523
BssECI CCNNGG 5 cut(s) 605, 1193, 1456, 1581, 1674
BssMI GATC 8 cut(s) 44, 184, 214, 275, 769, 1208, 1351, 1698
BssNI GRCGYC 2 cut(s) 805, 1660
BssSI CACGAG 1 cut(s) 382
BssT1I CCWWGG 2 cut(s) 605, 1581
Bst2BI CACGAG 1 cut(s) 382
Bst2UI CCWGG 1 cut(s) 1195
Bst4CI ACNGT 5 cut(s) 1011, 1249, 1508, 1597, 1630
Bst6I CTCTTC 3 cut(s) 498, 1026, 1476
BstACI GRCGYC 2 cut(s) 805, 1660
BstAFI CTTAAG 1 cut(s) 914
BstAPI GCANNNNNTGC 1 cut(s) 89
BstBI TTCGAA 2 cut(s) 643, 1342
BstC8I GCNNGC 3 cut(s) 980, 1140, 1717
BstDEI CTNAG 5 cut(s) 251, 444, 928, 989, 1241
BstENI CCTNNNNNAGG 1 cut(s) 98
BstF5I GGATG 4 cut(s) 118, 785, 1240, 1276
BstHHI GCGC 1 cut(s) 63
BstKTI GATC 8 cut(s) 47, 187, 217, 278, 772, 1211, 1354, 1701
BstMAI GTCTC 4 cut(s) 181, 722, 1531, 1606
BstMBI GATC 8 cut(s) 44, 184, 214, 275, 769, 1208, 1351, 1698
BstMWI GCNNNNNNNGC 1 cut(s) 89
BstNI CCWGG 1 cut(s) 1195
BstNSI RCATGY 1 cut(s) 1541
BstSCI CCNGG 2 cut(s) 1193, 1674
BstSFI CTRYAG 1 cut(s) 774
BstSLI GKGCMC 1 cut(s) 306
BstV1I GCAGC 2 cut(s) 358, 1072
BstV2I GAAGAC 1 cut(s) 224
BstX2I RGATCY 6 cut(s) 44, 184, 769, 1208, 1351, 1698
BstXI CCANNNNNNTGG 1 cut(s) 1588
BstYI RGATCY 6 cut(s) 44, 184, 769, 1208, 1351, 1698
BsuI GTATCC 1 cut(s) 280
BsuRI GGCC 2 cut(s) 1445, 1580
BtrI CACGTC 1 cut(s) 1622
BtsCI GGATG 4 cut(s) 118, 785, 1240, 1276
BtsIMutI CAGTG 3 cut(s) 622, 1082, 1317
Cac8I GCNNGC 3 cut(s) 980, 1140, 1717
CfoI GCGC 1 cut(s) 63
Cfr13I GGNCC 1 cut(s) 1395
CseI GACGC 1 cut(s) 794
Csp6I GTAC 1 cut(s) 783
CviAII CATG 6 cut(s) 162, 735, 1231, 1267, 1538, 1576
CviQI GTAC 1 cut(s) 783
DdeI CTNAG 5 cut(s) 251, 444, 928, 989, 1241
DpnI GATC 8 cut(s) 46, 186, 216, 277, 771, 1210, 1353, 1700
DpnII GATC 8 cut(s) 44, 184, 214, 275, 769, 1208, 1351, 1698
EaeI YGGCCR 2 cut(s) 1443, 1578
Eam1104I CTCTTC 3 cut(s) 498, 1026, 1476
EarI CTCTTC 3 cut(s) 498, 1026, 1476
Eco130I CCWWGG 2 cut(s) 605, 1581
Eco32I GATATC 1 cut(s) 1108
Eco47I GGWCC 1 cut(s) 1395
Eco88I CYCGRG 1 cut(s) 1457
EcoNI CCTNNNNNAGG 1 cut(s) 98
EcoRI GAATTC 1 cut(s) 618
EcoRII CCWGG 1 cut(s) 1193
EcoRV GATATC 1 cut(s) 1108
EcoT14I CCWWGG 2 cut(s) 605, 1581
ErhI CCWWGG 2 cut(s) 605, 1581
Esp3I CGTCTC 1 cut(s) 181
FaeI CATG 6 cut(s) 165, 738, 1234, 1270, 1541, 1579
FalI AAGNNNNNCTT 4 cut(s) 941, 973, 1473, 1505
FaqI GGGAC 2 cut(s) 488, 1399
FatI CATG 6 cut(s) 161, 734, 1230, 1266, 1537, 1575
FauI CCCGC 1 cut(s) 102
FbaI TGATCA 1 cut(s) 214
Fnu4HI GCNGC 2 cut(s) 372, 1061
FokI GGATG 4 cut(s) 125, 792, 1247, 1283
Fsp4HI GCNGC 2 cut(s) 372, 1061
FspBI CTAG 2 cut(s) 182, 488
GlaI GCGC 1 cut(s) 62
GluI GCNGC 2 cut(s) 372, 1061
GsaI CCCAGC 2 cut(s) 1067, 1425
GsuI CTGGAG 3 cut(s) 849, 1513, 1588
HaeIII GGCC 2 cut(s) 1445, 1580
HapII CCGG 1 cut(s) 1676
HgaI GACGC 1 cut(s) 794
HhaI GCGC 1 cut(s) 63
Hin1I GRCGYC 2 cut(s) 805, 1660
Hin1II CATG 6 cut(s) 165, 738, 1234, 1270, 1541, 1579
Hin6I GCGC 1 cut(s) 61
HinP1I GCGC 1 cut(s) 61
HincII GTYRAC 1 cut(s) 1284
HindII GTYRAC 1 cut(s) 1284
HinfI GANTC 5 cut(s) 4, 401, 908, 919, 1431
HpaII CCGG 1 cut(s) 1676
HphI GGTGA 2 cut(s) 1066, 1703
Hpy166II GTNNAC 3 cut(s) 1072, 1284, 1395
Hpy188I TCNGA 7 cut(s) 9, 447, 931, 947, 1030, 1305, 1504
Hpy8I GTNNAC 3 cut(s) 1072, 1284, 1395
Hpy99I CGWCG 3 cut(s) 810, 1638, 1662
HpyAV CCTTC 4 cut(s) 419, 596, 639, 1342
HpyCH4III ACNGT 5 cut(s) 1011, 1249, 1508, 1597, 1630
HpyCH4IV ACGT 4 cut(s) 1219, 1286, 1621, 1660
HpyCH4V TGCA 5 cut(s) 17, 346, 374, 755, 1238
HpyF10VI GCNNNNNNNGC 1 cut(s) 89
HpyF3I CTNAG 5 cut(s) 251, 444, 928, 989, 1241
HpySE526I ACGT 4 cut(s) 1219, 1286, 1621, 1660
Hsp92I GRCGYC 2 cut(s) 805, 1660
Hsp92II CATG 6 cut(s) 165, 738, 1234, 1270, 1541, 1579
HspAI GCGC 1 cut(s) 61
Ksp22I TGATCA 1 cut(s) 214
Kzo9I GATC 8 cut(s) 44, 184, 214, 275, 769, 1208, 1351, 1698
LguI GCTCTTC 2 cut(s) 498, 1476
LmnI GCTCC 1 cut(s) 545
Lsp1109I GCAGC 2 cut(s) 358, 1072
LweI GCATC 5 cut(s) 79, 1150, 1225, 1508, 1598
MaeI CTAG 2 cut(s) 182, 488
MaeII ACGT 4 cut(s) 1219, 1286, 1621, 1660
MaeIII GTNAC 5 cut(s) 49, 704, 1312, 1466, 1691
MalI GATC 8 cut(s) 46, 186, 216, 277, 771, 1210, 1353, 1700
MboI GATC 8 cut(s) 44, 184, 214, 275, 769, 1208, 1351, 1698
MflI RGATCY 6 cut(s) 44, 184, 769, 1208, 1351, 1698
MhlI GDGCHC 2 cut(s) 306, 1575
MlsI TGGCCA 2 cut(s) 1445, 1580
MluNI TGGCCA 2 cut(s) 1445, 1580
MmeI TCCRAC 1 cut(s) 993
MnlI CCTC 6 cut(s) 198, 351, 536, 1045, 1466, 1674
Mox20I TGGCCA 2 cut(s) 1445, 1580
MroXI GAANNNNTTC 4 cut(s) 791, 1178, 1331, 1485
MscI TGGCCA 2 cut(s) 1445, 1580
MseI TTAA 7 cut(s) 206, 333, 576, 666, 915, 995, 1004
Msp20I TGGCCA 2 cut(s) 1445, 1580
MspA1I CMGCKG 1 cut(s) 1063
MspCI CTTAAG 1 cut(s) 914
MspI CCGG 1 cut(s) 1676
MspR9I CCNGG 2 cut(s) 1195, 1676
Mva1269I GAATGC 1 cut(s) 111
MvaI CCWGG 1 cut(s) 1195
MwoI GCNNNNNNNGC 1 cut(s) 89
NciI CCSGG 1 cut(s) 1676
NdeII GATC 8 cut(s) 44, 184, 214, 275, 769, 1208, 1351, 1698
NlaIII CATG 6 cut(s) 165, 738, 1234, 1270, 1541, 1579
NlaIV GGNNCC 1 cut(s) 874
NmuCI GTSAC 4 cut(s) 704, 1312, 1466, 1691
NspI RCATGY 1 cut(s) 1541
NspV TTCGAA 2 cut(s) 643, 1342
PciI ACATGT 1 cut(s) 1537
PciSI GCTCTTC 2 cut(s) 498, 1476
PctI GAATGC 1 cut(s) 111
PdmI GAANNNNTTC 4 cut(s) 791, 1178, 1331, 1485
PfeI GAWTC 5 cut(s) 4, 401, 908, 919, 1431
PkrI GCNGC 2 cut(s) 373, 1062
PscI ACATGT 1 cut(s) 1537
Psp6I CCWGG 1 cut(s) 1193
PspFI CCCAGC 2 cut(s) 1063, 1421
PspGI CCWGG 1 cut(s) 1193
PspN4I GGNNCC 1 cut(s) 874
PspPI GGNCC 1 cut(s) 1395
PsuI RGATCY 6 cut(s) 44, 184, 769, 1208, 1351, 1698
PvuII CAGCTG 1 cut(s) 1063
RsaI GTAC 1 cut(s) 784
RsaNI GTAC 1 cut(s) 783
SapI GCTCTTC 2 cut(s) 498, 1476
SaqAI TTAA 7 cut(s) 206, 333, 576, 666, 915, 995, 1004
SatI GCNGC 2 cut(s) 372, 1061
Sau3AI GATC 8 cut(s) 44, 184, 214, 275, 769, 1208, 1351, 1698
Sau96I GGNCC 1 cut(s) 1395
ScrFI CCNGG 2 cut(s) 1195, 1676
SduI GDGCHC 2 cut(s) 306, 1575
SfaNI GCATC 5 cut(s) 79, 1150, 1225, 1508, 1598
SfcI CTRYAG 1 cut(s) 774
SfuI TTCGAA 2 cut(s) 643, 1342
SinI GGWCC 1 cut(s) 1395
SmlI CTYRAG 1 cut(s) 914
SmoI CTYRAG 1 cut(s) 914
SsiI CCGC 1 cut(s) 109
SspI AATATT 2 cut(s) 519, 900
SspMI CTAG 2 cut(s) 182, 488
StyD4I CCNGG 2 cut(s) 1193, 1674
StyI CCWWGG 2 cut(s) 605, 1581
TaaI ACNGT 5 cut(s) 1011, 1249, 1508, 1597, 1630
TaiI ACGT 4 cut(s) 1222, 1289, 1624, 1663
TaqI TCGA 8 cut(s) 616, 643, 808, 821, 906, 1342, 1359, 1406
TfiI GAWTC 5 cut(s) 4, 401, 908, 919, 1431
Tru1I TTAA 7 cut(s) 206, 333, 576, 666, 915, 995, 1004
Tru9I TTAA 7 cut(s) 206, 333, 576, 666, 915, 995, 1004
TscAI CASTG 3 cut(s) 629, 1082, 1317
TseFI GTSAC 4 cut(s) 704, 1312, 1466, 1691
TseI GCWGC 2 cut(s) 371, 1060
Tsp45I GTSAC 4 cut(s) 704, 1312, 1466, 1691
TspDTI ATGAA 5 cut(s) 129, 651, 1287, 1363, 1630
TspGWI ACGGA 1 cut(s) 299
TspRI CASTG 3 cut(s) 629, 1082, 1317
Vha464I CTTAAG 1 cut(s) 914
VpaK11BI GGWCC 1 cut(s) 1395
XagI CCTNNNNNAGG 1 cut(s) 98
XapI RAATTY 5 cut(s) 318, 352, 388, 618, 1094
XceI RCATGY 1 cut(s) 1541
XcmI CCANNNNNNNNNTGG 1 cut(s) 1612
XmnI GAANNNNTTC 4 cut(s) 791, 1178, 1331, 1485
XspI CTAG 2 cut(s) 182, 488
ZraI GACGTC 1 cut(s) 1661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.