RchiOBHm_Chr1g0324571

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000119
Physical Location & Seq
Forward (+)
12310544 .. 12313269
2726 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55440

Sequence Viewer

Length: 1533 bp
ATGGCGGCCTACAAAGTACACATAAAAGGAAAGTCGGAATTGGAATTGGATTGGTCATATTCGAAGATATCAATGGGTGAGATAATTCCATTTGCTAAATTAGTTGCTGGGAAGCTAGCATGGCGCTCCACGCTAACTGATATTTTGGCTGTTCTTCCCATACCACAATTTCTAGTGGTCTTTGGTTTCTTCAAAATGAGAGGCCGTGGATATTTGGAACGCAAGAAGATTCTCAATGTCTTTCTCCTGGGTCAATATTTGCCAAGGATTTATCGAATTTACTTGTCATCTAAGGAACTTAGACAAACTACAGGAATTTGGGTTAAGGCTCTGTTCAACTTTTTTCTGTATATACTAGCCAGTCATGTCATTGGAGCCTTTTGGTACTTCTTTTCTATTCAACGTGAGACATCATGCTGGCATCATGCTTGTATAAAGAATAGTACAAATGTCGAAGGATGTATGAGTACTTTTTACTGTGATGGTCACAATACTACCGCTAGAAATGTCACTTTTTTCAATCAGTTTTGCCACATCAATGTTGAAGACAATGCTACAGCGCTTTTTGATTTTGGAATATTTCTTAATTCTCTCAAGAATGGTAACACGGGCCATATACATTTTGCAACAAAGTTGTCCTACTCATTTTGGTGGGGATTGCGGAATCTGAGCAATTTTGGCACGAGTCTCGAAACAAGTACCTATGTGTGGGAAAGTTGCTTTGCAGTATTTATTTGTGTCATTGGCTTGCTACTGTTTCTATATCTGATTGGAAATGTTCAGACCTTTATGTCCATGGAAGCTCAAAGATGGGAGGTTATAAGAAACAAGATGCTTTTGAAAGAGAAAGATATAGAAAGATGGATGGACAGGAATGAATTGCCCGATGATATGAAGAAAGAAATCAAGAAAAACATAACGCAAAAATTGGAAGAAAACAAAGATTCAGATCTGGAGAACCTTTTCAATATTCTTCCCTGGTACACCAAAAAGTACCTAAAGCGAGTTCTCTGCATGGACATACTAAAGAAAGTACCTAAACTGGAAAGAATGGATGAGAAAGTGTTGAAAATGATCTGCGACTATCTAAAGCCAGAGATGTATGCTGAGGGCGCCATGGTTTTTCACATGGGAGAACCGCTTGATAGCATGCTATTCATTACAGAAGGCACTATACTGACCTACAAAACTACCGGTACTGATAATCATGCTCATGAAAACGCAAAATTGGGTCCTCCTGCATCCCCATCAATCGGCACCCTTGAGAAAGGCTACTTCTATGGCGAACAACTGCTGCACTGGGCATCACAAAAAAACGTGAATTTAACGGAGGTCCCTAGCTCTGCCGACAATGTGAAGTGCCATACAAAAGTAGAAGGCTTTGTTCTCATGGCCAAGGACTTAAGAACTGTAGTCTCCAAATGTGAGTACTGGTGGAAATTAAGCATTAGTACTCCTAGAGTGGGTGGTACTCGGACCACACCAAATGCTAGGAATGTGCAGCAGAAACCTGGAGTGGATCCGCAGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

510

Amino Acids

59.0

Weight (kDa)

8.99

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 44 - 269 9.2e-09 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 821
AasI GACNNNNNNGTC 1 cut(s) 790
AccB1I GGYRCC 2 cut(s) 1112, 1256
AciI CCGC 5 cut(s) 5, 498, 661, 1139, 1523
AclWI GGATC 2 cut(s) 1514, 1527
AcoI YGGCCR 1 cut(s) 1392
AcsI RAATTY 3 cut(s) 276, 315, 1321
AcyI GRCGYC 1 cut(s) 1113
AfeI AGCGCT 1 cut(s) 561
AfiI CCNNNNNNNGG 3 cut(s) 708, 1253, 1463
AflII CTTAAG 1 cut(s) 1402
AgeI ACCGGT 1 cut(s) 1193
AgsI TTSAA 8 cut(s) 193, 337, 401, 520, 545, 841, 967, 1069
AjnI CCWGG 3 cut(s) 246, 977, 1510
AluBI AGCT 3 cut(s) 115, 803, 1341
AluI AGCT 3 cut(s) 115, 803, 1341
Alw26I GTCTC 3 cut(s) 401, 692, 1420
AlwI GGATC 2 cut(s) 1514, 1527
Aor51HI AGCGCT 1 cut(s) 561
AoxI GGCC 4 cut(s) 6, 202, 610, 1392
ApeKI GCWGC 2 cut(s) 1294, 1501
ApoI RAATTY 3 cut(s) 276, 315, 1321
AsiGI ACCGGT 1 cut(s) 1193
Asp700I GAANNNNTTC 1 cut(s) 962
AspLEI GCGC 3 cut(s) 126, 562, 1115
AspS9I GGNCC 4 cut(s) 610, 1232, 1333, 1476
AsuHPI GGTGA 1 cut(s) 89
AsuII TTCGAA 1 cut(s) 62
AsuNHI GCTAGC 1 cut(s) 115
AvaII GGWCC 3 cut(s) 1232, 1333, 1476
BalI TGGCCA 1 cut(s) 1394
BamHI GGATCC 1 cut(s) 1519
BanI GGYRCC 2 cut(s) 1112, 1256
BarI GAAGNNNNNNTAC 2 cut(s) 1158, 1190
BauI CACGAG 1 cut(s) 682
BbsI GAAGAC 1 cut(s) 552
BbvCI CCTCAGC 1 cut(s) 1107
BbvI GCAGC 2 cut(s) 1281, 1513
BccI CCATC 5 cut(s) 476, 804, 855, 859, 1255
BceAI ACGGC 1 cut(s) 189
BcgI CGANNNNNNTGC 4 cut(s) 670, 704, 993, 1027
BciT130I CCWGG 3 cut(s) 248, 979, 1512
BcoDI GTCTC 3 cut(s) 401, 692, 1420
BfaI CTAG 8 cut(s) 116, 173, 356, 501, 1338, 1458, 1491, 1531
BfmI CTRYAG 3 cut(s) 309, 555, 1410
BfoI RGCGCY 3 cut(s) 127, 563, 1116
BfrI CTTAAG 1 cut(s) 1402
BglII AGATCT 1 cut(s) 949
BisI GCNGC 3 cut(s) 6, 1295, 1502
BlsI GCNGC 3 cut(s) 7, 1296, 1503
BmcAI AGTACT 4 cut(s) 469, 1430, 1453, 1529
Bme1390I CCNGG 3 cut(s) 248, 979, 1512
Bme18I GGWCC 3 cut(s) 1232, 1333, 1476
BmgT120I GGNCC 4 cut(s) 610, 1232, 1333, 1476
BmiI GGNNCC 6 cut(s) 376, 1114, 1233, 1258, 1335, 1521
BmrFI CCNGG 3 cut(s) 248, 979, 1512
BmrI ACTGGG 1 cut(s) 1309
BmsI GCATC 4 cut(s) 430, 822, 1250, 1313
BmtI GCTAGC 1 cut(s) 119
BmuI ACTGGG 1 cut(s) 1309
BpiI GAAGAC 1 cut(s) 552
BpmI CTGGAG 2 cut(s) 974, 1533
Bpu10I CCTNAGC 1 cut(s) 1107
Bpu14I TTCGAA 1 cut(s) 62
BpuEI CTTGAG 2 cut(s) 578, 1283
BsaBI GATNNNNATC 1 cut(s) 948
BsaHI GRCGYC 1 cut(s) 1113
BsaJI CCNNGG 7 cut(s) 205, 247, 263, 795, 977, 1116, 1395
BsaWI WCCGGW 1 cut(s) 1193
Bsc4I CCNNNNNNNGG 3 cut(s) 708, 1253, 1463
Bse118I RCCGGY 1 cut(s) 1193
Bse1I ACTGG 4 cut(s) 360, 1047, 1304, 1436
Bse8I GATNNNNATC 1 cut(s) 948
BseBI CCWGG 3 cut(s) 248, 979, 1512
BseDI CCNNGG 7 cut(s) 205, 247, 263, 795, 977, 1116, 1395
BseGI GGATG 4 cut(s) 464, 870, 1060, 1241
BseJI GATNNNNATC 1 cut(s) 948
BseLI CCNNNNNNNGG 3 cut(s) 708, 1253, 1463
BseMII CTCAG 2 cut(s) 659, 1098
BseNI ACTGG 4 cut(s) 360, 1047, 1304, 1436
BseXI GCAGC 2 cut(s) 1281, 1513
BseYI CCCAGC 1 cut(s) 107
BsgI GTGCAG 2 cut(s) 1280, 1520
BshFI GGCC 4 cut(s) 8, 204, 612, 1394
BshNI GGYRCC 2 cut(s) 1112, 1256
BshTI ACCGGT 1 cut(s) 1193
BsiSI CCGG 1 cut(s) 1194
BslFI GGGAC 1 cut(s) 1319
BslI CCNNNNNNNGG 3 cut(s) 708, 1253, 1463
BsmAI GTCTC 3 cut(s) 401, 692, 1420
BsmFI GGGAC 1 cut(s) 1319
BsnI GGCC 4 cut(s) 8, 204, 612, 1394
Bsp119I TTCGAA 1 cut(s) 62
Bsp143I GATC 3 cut(s) 949, 1074, 1519
Bsp19I CCATGG 2 cut(s) 795, 1116
BspACI CCGC 5 cut(s) 5, 498, 661, 1139, 1523
BspANI GGCC 4 cut(s) 8, 204, 612, 1394
BspCNI CTCAG 2 cut(s) 660, 1099
BspHI TCATGA 1 cut(s) 1213
BspLI GGNNCC 6 cut(s) 376, 1114, 1233, 1258, 1335, 1521
BspOI GCTAGC 1 cut(s) 119
BspPI GGATC 2 cut(s) 1514, 1527
BspT104I TTCGAA 1 cut(s) 62
BspT107I GGYRCC 2 cut(s) 1112, 1256
BspTI CTTAAG 1 cut(s) 1402
BsrFI RCCGGY 1 cut(s) 1193
BsrI ACTGG 4 cut(s) 360, 1047, 1304, 1436
BssAI RCCGGY 1 cut(s) 1193
BssECI CCNNGG 7 cut(s) 205, 247, 263, 795, 977, 1116, 1395
BssMI GATC 3 cut(s) 949, 1074, 1519
BssNI GRCGYC 1 cut(s) 1113
BssSI CACGAG 1 cut(s) 682
BssT1I CCWWGG 4 cut(s) 263, 795, 1116, 1395
Bst2BI CACGAG 1 cut(s) 682
Bst2UI CCWGG 3 cut(s) 248, 979, 1512
Bst4CI ACNGT 3 cut(s) 479, 756, 1411
BstACI GRCGYC 1 cut(s) 1113
BstAFI CTTAAG 1 cut(s) 1402
BstBI TTCGAA 1 cut(s) 62
BstC8I GCNNGC 4 cut(s) 117, 419, 749, 1151
BstDEI CTNAG 4 cut(s) 291, 299, 668, 1107
BstDSI CCRYGG 3 cut(s) 205, 795, 1116
BstF5I GGATG 4 cut(s) 464, 870, 1060, 1241
BstH2I RGCGCY 3 cut(s) 127, 563, 1116
BstHHI GCGC 3 cut(s) 126, 562, 1115
BstKTI GATC 3 cut(s) 952, 1077, 1522
BstMAI GTCTC 3 cut(s) 401, 692, 1420
BstMBI GATC 3 cut(s) 949, 1074, 1519
BstMWI GCNNNNNNNGC 4 cut(s) 121, 130, 678, 1112
BstNI CCWGG 3 cut(s) 248, 979, 1512
BstNSI RCATGY 1 cut(s) 1153
BstSCI CCNGG 3 cut(s) 246, 977, 1510
BstSFI CTRYAG 3 cut(s) 309, 555, 1410
BstV1I GCAGC 2 cut(s) 1281, 1513
BstV2I GAAGAC 1 cut(s) 552
BstX2I RGATCY 2 cut(s) 949, 1519
BstYI RGATCY 2 cut(s) 949, 1519
BsuRI GGCC 4 cut(s) 8, 204, 612, 1394
BtgI CCRYGG 3 cut(s) 205, 795, 1116
BtsCI GGATG 4 cut(s) 464, 870, 1060, 1241
BtsIMutI CAGTG 1 cut(s) 1297
Cac8I GCNNGC 4 cut(s) 117, 419, 749, 1151
CciI TCATGA 1 cut(s) 1213
CfoI GCGC 3 cut(s) 126, 562, 1115
Cfr10I RCCGGY 1 cut(s) 1193
Cfr13I GGNCC 4 cut(s) 610, 1232, 1333, 1476
CspAI ACCGGT 1 cut(s) 1193
DdeI CTNAG 4 cut(s) 291, 299, 668, 1107
DinI GGCGCC 1 cut(s) 1114
DpnI GATC 3 cut(s) 951, 1076, 1521
DpnII GATC 3 cut(s) 949, 1074, 1519
DrdI GACNNNNNNGTC 1 cut(s) 790
DseDI GACNNNNNNGTC 1 cut(s) 790
EaeI YGGCCR 1 cut(s) 1392
Eco130I CCWWGG 4 cut(s) 263, 795, 1116, 1395
Eco32I GATATC 1 cut(s) 69
Eco47I GGWCC 3 cut(s) 1232, 1333, 1476
Eco47III AGCGCT 1 cut(s) 561
EcoO109I RGGNCCY 2 cut(s) 1232, 1333
EcoRII CCWGG 3 cut(s) 246, 977, 1510
EcoRV GATATC 1 cut(s) 69
EcoT14I CCWWGG 4 cut(s) 263, 795, 1116, 1395
EgeI GGCGCC 1 cut(s) 1114
EheI GGCGCC 1 cut(s) 1114
ErhI CCWWGG 4 cut(s) 263, 795, 1116, 1395
FaqI GGGAC 1 cut(s) 1319
Fnu4HI GCNGC 3 cut(s) 6, 1295, 1502
FokI GGATG 4 cut(s) 471, 877, 1067, 1228
Fsp4HI GCNGC 3 cut(s) 6, 1295, 1502
FspBI CTAG 8 cut(s) 116, 173, 356, 501, 1338, 1458, 1491, 1531
GlaI GCGC 3 cut(s) 125, 561, 1114
GluI GCNGC 3 cut(s) 6, 1295, 1502
GsaI CCCAGC 1 cut(s) 111
GsuI CTGGAG 2 cut(s) 974, 1533
HaeII RGCGCY 3 cut(s) 127, 563, 1116
HaeIII GGCC 4 cut(s) 8, 204, 612, 1394
HapII CCGG 1 cut(s) 1194
HhaI GCGC 3 cut(s) 126, 562, 1115
Hin1I GRCGYC 1 cut(s) 1113
Hin6I GCGC 3 cut(s) 124, 560, 1113
HinP1I GCGC 3 cut(s) 124, 560, 1113
HinfI GANTC 4 cut(s) 229, 664, 685, 944
HpaII CCGG 1 cut(s) 1194
HphI GGTGA 1 cut(s) 89
Hpy166II GTNNAC 2 cut(s) 19, 984
Hpy188I TCNGA 6 cut(s) 37, 669, 768, 783, 949, 1476
Hpy188III TCNNGA 5 cut(s) 595, 689, 907, 953, 1214
Hpy8I GTNNAC 2 cut(s) 19, 984
HpyAV CCTTC 3 cut(s) 449, 1160, 1370
HpyCH4III ACNGT 3 cut(s) 479, 756, 1411
HpyCH4IV ACGT 2 cut(s) 403, 1317
HpyCH4V TGCA 6 cut(s) 626, 725, 1014, 1241, 1297, 1501
HpyF10VI GCNNNNNNNGC 4 cut(s) 121, 130, 678, 1112
HpyF3I CTNAG 4 cut(s) 291, 299, 668, 1107
HpySE526I ACGT 2 cut(s) 403, 1317
Hsp92I GRCGYC 1 cut(s) 1113
HspAI GCGC 3 cut(s) 124, 560, 1113
KasI GGCGCC 1 cut(s) 1112
Kzo9I GATC 3 cut(s) 949, 1074, 1519
LmnI GCTCC 2 cut(s) 131, 374
Lsp1109I GCAGC 2 cut(s) 1281, 1513
LweI GCATC 4 cut(s) 430, 822, 1250, 1313
MaeI CTAG 8 cut(s) 116, 173, 356, 501, 1338, 1458, 1491, 1531
MaeII ACGT 2 cut(s) 403, 1317
MaeIII GTNAC 3 cut(s) 485, 508, 602
MalI GATC 3 cut(s) 951, 1076, 1521
MboI GATC 3 cut(s) 949, 1074, 1519
MboII GAAGA 8 cut(s) 76, 146, 181, 238, 557, 907, 944, 965
MflI RGATCY 2 cut(s) 949, 1519
MlsI TGGCCA 1 cut(s) 1394
MluNI TGGCCA 1 cut(s) 1394
Mly113I GGCGCC 1 cut(s) 1113
MlyI GAGTC 1 cut(s) 694
MmeI TCCRAC 1 cut(s) 15
MnlI CCTC 5 cut(s) 194, 808, 1102, 1245, 1324
Mox20I TGGCCA 1 cut(s) 1394
MroXI GAANNNNTTC 1 cut(s) 962
MscI TGGCCA 1 cut(s) 1394
MseI TTAA 5 cut(s) 324, 585, 1325, 1403, 1442
MslI CAYNNNNRTG 3 cut(s) 537, 649, 1212
Msp20I TGGCCA 1 cut(s) 1394
MspCI CTTAAG 1 cut(s) 1402
MspI CCGG 1 cut(s) 1194
MspR9I CCNGG 3 cut(s) 248, 979, 1512
MvaI CCWGG 3 cut(s) 248, 979, 1512
MwoI GCNNNNNNNGC 4 cut(s) 121, 130, 678, 1112
NarI GGCGCC 1 cut(s) 1113
NcoI CCATGG 2 cut(s) 795, 1116
NdeII GATC 3 cut(s) 949, 1074, 1519
NheI GCTAGC 1 cut(s) 115
NlaIV GGNNCC 6 cut(s) 376, 1114, 1233, 1258, 1335, 1521
NmuCI GTSAC 2 cut(s) 485, 508
NspI RCATGY 1 cut(s) 1153
NspV TTCGAA 1 cut(s) 62
PaeI GCATGC 1 cut(s) 1153
PagI TCATGA 1 cut(s) 1213
PdmI GAANNNNTTC 1 cut(s) 962
PfeI GAWTC 3 cut(s) 229, 664, 944
PinAI ACCGGT 1 cut(s) 1193
PkrI GCNGC 3 cut(s) 7, 1296, 1503
PleI GAGTC 1 cut(s) 693
PluTI GGCGCC 1 cut(s) 1116
PpsI GAGTC 1 cut(s) 693
PpuMI RGGWCCY 2 cut(s) 1232, 1333
PsiI TTATAA 1 cut(s) 821
Psp5II RGGWCCY 2 cut(s) 1232, 1333
Psp6I CCWGG 3 cut(s) 246, 977, 1510
PspFI CCCAGC 1 cut(s) 107
PspGI CCWGG 3 cut(s) 246, 977, 1510
PspN4I GGNNCC 6 cut(s) 376, 1114, 1233, 1258, 1335, 1521
PspPI GGNCC 4 cut(s) 610, 1232, 1333, 1476
PspPPI RGGWCCY 2 cut(s) 1232, 1333
PsuI RGATCY 2 cut(s) 949, 1519
RseI CAYNNNNRTG 3 cut(s) 537, 649, 1212
SaqAI TTAA 5 cut(s) 324, 585, 1325, 1403, 1442
SatI GCNGC 3 cut(s) 6, 1295, 1502
Sau3AI GATC 3 cut(s) 949, 1074, 1519
Sau96I GGNCC 4 cut(s) 610, 1232, 1333, 1476
ScaI AGTACT 4 cut(s) 469, 1430, 1453, 1529
SchI GAGTC 1 cut(s) 694
ScrFI CCNGG 3 cut(s) 248, 979, 1512
SfaNI GCATC 4 cut(s) 430, 822, 1250, 1313
SfcI CTRYAG 3 cut(s) 309, 555, 1410
SfoI GGCGCC 1 cut(s) 1114
SfuI TTCGAA 1 cut(s) 62
SinI GGWCC 3 cut(s) 1232, 1333, 1476
SmiMI CAYNNNNRTG 3 cut(s) 537, 649, 1212
SmlI CTYRAG 3 cut(s) 593, 1262, 1402
SmoI CTYRAG 3 cut(s) 593, 1262, 1402
SphI GCATGC 1 cut(s) 1153
SsiI CCGC 5 cut(s) 5, 498, 661, 1139, 1523
SspDI GGCGCC 1 cut(s) 1112
SspI AATATT 3 cut(s) 257, 579, 970
SspMI CTAG 8 cut(s) 116, 173, 356, 501, 1338, 1458, 1491, 1531
StyD4I CCNGG 3 cut(s) 246, 977, 1510
StyI CCWWGG 4 cut(s) 263, 795, 1116, 1395
TaaI ACNGT 3 cut(s) 479, 756, 1411
TaiI ACGT 2 cut(s) 406, 1320
TaqI TCGA 4 cut(s) 62, 274, 453, 690
TatI WGTACW 6 cut(s) 16, 443, 467, 1428, 1451, 1527
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 3 cut(s) 229, 664, 944
Tru1I TTAA 5 cut(s) 324, 585, 1325, 1403, 1442
Tru9I TTAA 5 cut(s) 324, 585, 1325, 1403, 1442
TscAI CASTG 1 cut(s) 1304
TseFI GTSAC 2 cut(s) 485, 508
TseI GCWGC 2 cut(s) 1294, 1501
Tsp45I GTSAC 2 cut(s) 485, 508
TspDTI ATGAA 4 cut(s) 891, 908, 1147, 1230
TspGWI ACGGA 1 cut(s) 1343
TspRI CASTG 1 cut(s) 1304
Vha464I CTTAAG 1 cut(s) 1402
VpaK11BI GGWCC 3 cut(s) 1232, 1333, 1476
XapI RAATTY 3 cut(s) 276, 315, 1321
XceI RCATGY 1 cut(s) 1153
XmnI GAANNNNTTC 1 cut(s) 962
XspI CTAG 8 cut(s) 116, 173, 356, 501, 1338, 1458, 1491, 1531
ZrmI AGTACT 4 cut(s) 469, 1430, 1453, 1529
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.