Rw1G039280

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
66843287 .. 66848703
5417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G039280.1

Sequence Viewer

Length: 1812 bp
ATGAACAGTGGAGGACATTCAATATTGTCAGAGACAAAATGGCCTACCTTTAAGGAATTTTTTGACCCCCAGGGGGCCTTCATTGCAATGTGGTATAAGATATTTGTGATTTCATGTCTGATTTCAGTAACCGCAGACCCCTTGTTCTTCTACATCCCCTACATCAACAAAGATAAAAAGTGCATTGATGGGGACAAGAGGGTGAGAACTGCAGCTCTAGTCCTCCGATCACTCACCGATATGACTTTCATAATGCATATTATACATGAAATTCGTGTTAGTACCAACACTGTGGTGTCAGAGATATCAAAAAGAGGAAAGCCAGGTTGGCCATGGAAAAAGGCAGAGTTACTTGGCTTTGCCAAGGCAATATCTCAGAAGATGTCCTGGTTATCTATCTCCATCATAATAGACTTCATAGCCATTCTTCCGATCCCACAAGTGGCACTATCGGTATTCTTTCTGAAAATGGATGGCTCTGACTGCAAAAGGAAGATTTTAAACGGGCTCCTTCTCCTTCAATATATGCCAAAGATTTATAGAATCTACCTTTCGTGTAAAGAACTTAAACAAACCGGAATATGGGCTAGAGGTGCATTCAATATTTTTCTCTACATCCTCGCCAGTCATGTACTTGGAGCCTTTTGGTATTTCCTTTCTGTTCAACGAGAGACATCATGCTGGCATGAGGCTTGTGAACAACATCCTGATACCATAAGATGTATATCAACTTACTACTTAATATCACTCCTGGATGAAAATTGCCCGGTAAATCCATCAGATGCAACACAATTTAATTTCGGAATCTTCCTTAATGCCCTTGAGTCCGGTAGCACGCACTCAACAAAGTTTTCCAAGAAGTTCTTTTACTCTTTCTGGTGGGGTCTGCGAAATCTAAGTTCTCTTGGTCAAAATTTGGAAACGAGTACCTATGTGTGGGAAAACTGCTTCGCAATCGTTATATCTCTAACTGGTTTGCTACTAGTTTTGTATCTTATTGGAAATGTACAGACGTATATACAGTTGGCAACTACGAAATCGGAAGAGATAAGACAGAAGATGATAATGAAAGAGCTAGAGATACAATGGTGGATGTCCAGAAATCATCTCCCTAACGATATGAAGACAGTGATCATCGAAAACGTAAGACAGAAATTGGAAGAAAACAAAGATGTTCATGTGGAGAATCTACTCTCTATTCTTCCCCTGAAGGACAGAAGGTCCATAAAGCGCCTTCTCTGCATGGACTCACTTAAGAAAGTACCGATGCTTCGATATATGGATGAAAGTGTGTTAAAACTCATCTGCGACAATCTGAAACCAGTAATCTACACAGAGAACAGTTATGTAATTCGAGCAGGAGAACCACTTGATCTAATGCTCTTCAACGCAGAAGGCATTATATGGACTTACACAACAAGTACTGATGGTTCAATAAAATTGGGTTCCTCAATCACAGAGTGTCTTGGTAAAGGTGATTTCTATGGAGAAGAACTTTTGAGTTGGGCTGCCTCATACATGTCCTTCTCCGACCTCCCTATCTCGACCCAAAATGTAAAATGCCATACAAAAGTTGAAGCCTTTTCTCTCATGGCAAAGGACTTGAAGGCTGTGGTCTCCAAATTCTGGTGGCATTTCAGCAAGGCGGTTCCCGATTTGAACAGAAACAATTCTCAGCTGGAGGAATTGGCTCTTTCTTCCATAAGAGCCCGTCGCCGCAATCGATTAAAGAAGCATATAAAAGCTCCTCAATTGTCTACTTACTCCCAAGAACTTGGGTACCTGCGGCTATACCCTGTTAATCGTTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

603

Amino Acids

69.52

Weight (kDa)

9.08

Isoelectric Point (pI)

46.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 31 - 347 1.4e-12 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1791
Acc65I GGTACC 1 cut(s) 1779
AccB1I GGYRCC 1 cut(s) 1779
AccB7I CCANNNNNTGG 1 cut(s) 1626
AccI GTMKAC 1 cut(s) 1757
AciI CCGC 4 cut(s) 132, 1646, 1717, 1786
AclWI GGATC 1 cut(s) 427
AcoI YGGCCR 1 cut(s) 329
AcsI RAATTY 4 cut(s) 56, 270, 913, 1622
AcuI CTGAAG 1 cut(s) 1229
AdeI CACNNNGTG 1 cut(s) 1461
AfaI GTAC 7 cut(s) 283, 633, 928, 1008, 1263, 1423, 1781
AfiI CCNNNNNNNGG 5 cut(s) 73, 442, 582, 936, 1626
AflII CTTAAG 1 cut(s) 1253
AflIII ACRYGT 1 cut(s) 1518
AgsI TTSAA 9 cut(s) 21, 521, 601, 665, 1387, 1434, 1577, 1606, 1660
AhdI GACNNNNNGTC 1 cut(s) 1219
AhlI ACTAGT 1 cut(s) 982
AjnI CCWGG 4 cut(s) 69, 322, 386, 750
AjuI GAANNNNNNNTTGG 2 cut(s) 310, 342
AleI CACNNNNGTG 1 cut(s) 293
AluBI AGCT 4 cut(s) 215, 1075, 1678, 1745
AluI AGCT 4 cut(s) 215, 1075, 1678, 1745
Alw26I GTCTC 3 cut(s) 26, 665, 1621
AlwI GGATC 1 cut(s) 427
AoxI GGCC 3 cut(s) 41, 75, 329
ApeKI GCWGC 2 cut(s) 212, 1508
ApoI RAATTY 4 cut(s) 56, 270, 913, 1622
Asp700I GAANNNNTTC 1 cut(s) 1669
Asp718I GGTACC 1 cut(s) 1779
AspLEI GCGC 1 cut(s) 1233
AspS9I GGNCC 2 cut(s) 75, 1221
AsuC2I CCSGG 1 cut(s) 767
AsuHPI GGTGA 3 cut(s) 214, 226, 1487
AvaII GGWCC 1 cut(s) 1221
BaeI ACNNNNGTAYC 4 cut(s) 1073, 1106, 1763, 1796
BalI TGGCCA 1 cut(s) 331
BanI GGYRCC 1 cut(s) 1779
BanII GRGCYC 2 cut(s) 510, 1711
BarI GAAGNNNNNNTAC 4 cut(s) 851, 883, 1254, 1286
BbsI GAAGAC 1 cut(s) 1130
BbvI GCAGC 2 cut(s) 224, 1495
BccI CCATC 5 cut(s) 182, 410, 467, 784, 1421
BciT130I CCWGG 4 cut(s) 71, 324, 388, 752
BclI TGATCA 1 cut(s) 1131
BcnI CCSGG 1 cut(s) 767
BcoDI GTCTC 3 cut(s) 26, 665, 1621
BcuI ACTAGT 1 cut(s) 982
BfaI CTAG 4 cut(s) 218, 588, 983, 1076
BfmI CTRYAG 1 cut(s) 210
BfoI RGCGCY 1 cut(s) 1234
BfrI CTTAAG 1 cut(s) 1253
BfuAI ACCTGC 1 cut(s) 1791
BglI GCCNNNNNGGC 1 cut(s) 328
BisI GCNGC 4 cut(s) 213, 1509, 1717, 1787
BlsI GCNGC 4 cut(s) 214, 1510, 1718, 1788
BmcAI AGTACT 1 cut(s) 1423
Bme1390I CCNGG 5 cut(s) 71, 324, 388, 752, 767
Bme18I GGWCC 1 cut(s) 1221
BmeRI GACNNNNNGTC 1 cut(s) 1219
BmgT120I GGNCC 2 cut(s) 75, 1221
BmiI GGNNCC 6 cut(s) 76, 509, 640, 1447, 1650, 1781
BmrFI CCNGG 5 cut(s) 71, 324, 388, 752, 767
BmsI GCATC 2 cut(s) 772, 1257
BpiI GAAGAC 1 cut(s) 1130
BpmI CTGGAG 1 cut(s) 1700
BpuEI CTTGAG 1 cut(s) 842
BpuMI CCSGG 1 cut(s) 767
Bsa29I ATCGAT 1 cut(s) 1723
BsaBI GATNNNNATC 1 cut(s) 724
BsaI GGTCTC 1 cut(s) 1621
BsaJI CCNNGG 4 cut(s) 69, 70, 332, 363
BsaWI WCCGGW 2 cut(s) 575, 827
Bsc4I CCNNNNNNNGG 5 cut(s) 73, 442, 582, 936, 1626
Bse1I ACTGG 3 cut(s) 624, 976, 1322
Bse3DI GCAATG 2 cut(s) 81, 93
Bse8I GATNNNNATC 1 cut(s) 724
BseBI CCWGG 4 cut(s) 71, 324, 388, 752
BseCI ATCGAT 1 cut(s) 1723
BseDI CCNNGG 4 cut(s) 69, 70, 332, 363
BseGI GGATG 7 cut(s) 153, 478, 615, 703, 760, 1098, 1288
BseJI GATNNNNATC 1 cut(s) 724
BseLI CCNNNNNNNGG 5 cut(s) 73, 442, 582, 936, 1626
BseMI GCAATG 2 cut(s) 81, 93
BseMII CTCAG 2 cut(s) 389, 1688
BseNI ACTGG 3 cut(s) 624, 976, 1322
BseRI GAGGAG 1 cut(s) 1737
BseXI GCAGC 2 cut(s) 224, 1495
BshFI GGCC 3 cut(s) 43, 77, 331
BshNI GGYRCC 1 cut(s) 1779
BshVI ATCGAT 1 cut(s) 1723
BsiSI CCGG 3 cut(s) 576, 767, 828
BslFI GGGAC 1 cut(s) 206
BslI CCNNNNNNNGG 5 cut(s) 73, 442, 582, 936, 1626
BsmAI GTCTC 3 cut(s) 26, 665, 1621
BsmFI GGGAC 1 cut(s) 206
BsmI GAATGC 1 cut(s) 596
BsnI GGCC 3 cut(s) 43, 77, 331
Bso31I GGTCTC 1 cut(s) 1621
Bsp1286I GDGCHC 2 cut(s) 510, 1711
Bsp1407I TGTACA 1 cut(s) 1006
Bsp143I GATC 4 cut(s) 227, 432, 1131, 1372
Bsp19I CCATGG 1 cut(s) 332
BspACI CCGC 4 cut(s) 132, 1646, 1717, 1786
BspANI GGCC 3 cut(s) 43, 77, 331
BspCNI CTCAG 2 cut(s) 388, 1687
BspDI ATCGAT 1 cut(s) 1723
BspLI GGNNCC 6 cut(s) 76, 509, 640, 1447, 1650, 1781
BspMAI CTGCAG 1 cut(s) 214
BspMI ACCTGC 1 cut(s) 1791
BspPI GGATC 1 cut(s) 427
BspQI GCTCTTC 1 cut(s) 1388
BspT107I GGYRCC 1 cut(s) 1779
BspTI CTTAAG 1 cut(s) 1253
BspTNI GGTCTC 1 cut(s) 1621
BsrDI GCAATG 2 cut(s) 81, 93
BsrGI TGTACA 1 cut(s) 1006
BsrI ACTGG 3 cut(s) 624, 976, 1322
BssECI CCNNGG 4 cut(s) 69, 70, 332, 363
BssMI GATC 4 cut(s) 227, 432, 1131, 1372
BssT1I CCWWGG 2 cut(s) 332, 363
Bst2UI CCWGG 4 cut(s) 71, 324, 388, 752
Bst4CI ACNGT 5 cut(s) 8, 292, 1023, 1129, 1343
Bst6I CTCTTC 2 cut(s) 1038, 1388
BstAFI CTTAAG 1 cut(s) 1253
BstAUI TGTACA 1 cut(s) 1006
BstC8I GCNNGC 2 cut(s) 683, 836
BstDEI CTNAG 3 cut(s) 375, 896, 1674
BstDSI CCRYGG 1 cut(s) 332
BstF5I GGATG 7 cut(s) 153, 478, 615, 703, 760, 1098, 1288
BstH2I RGCGCY 1 cut(s) 1234
BstHHI GCGC 1 cut(s) 1233
BstKTI GATC 4 cut(s) 230, 435, 1134, 1375
BstMAI GTCTC 3 cut(s) 26, 665, 1621
BstMBI GATC 4 cut(s) 227, 432, 1131, 1372
BstMWI GCNNNNNNNGC 5 cut(s) 83, 328, 483, 593, 1239
BstNI CCWGG 4 cut(s) 71, 324, 388, 752
BstNSI RCATGY 1 cut(s) 1522
BstSCI CCNGG 5 cut(s) 69, 322, 386, 750, 765
BstSFI CTRYAG 1 cut(s) 210
BstV1I GCAGC 2 cut(s) 224, 1495
BstV2I GAAGAC 1 cut(s) 1130
BstXI CCANNNNNNTGG 2 cut(s) 292, 1775
Bsu15I ATCGAT 1 cut(s) 1723
BsuRI GGCC 3 cut(s) 43, 77, 331
BsuTUI ATCGAT 1 cut(s) 1723
BtgI CCRYGG 1 cut(s) 332
BtsCI GGATG 7 cut(s) 153, 478, 615, 703, 760, 1098, 1288
BtsIMutI CAGTG 3 cut(s) 13, 288, 1134
BveI ACCTGC 1 cut(s) 1791
Cac8I GCNNGC 2 cut(s) 683, 836
CfoI GCGC 1 cut(s) 1233
Cfr13I GGNCC 2 cut(s) 75, 1221
ClaI ATCGAT 1 cut(s) 1723
Csp6I GTAC 7 cut(s) 282, 632, 927, 1007, 1262, 1422, 1780
CviQI GTAC 7 cut(s) 282, 632, 927, 1007, 1262, 1422, 1780
DdeI CTNAG 3 cut(s) 375, 896, 1674
DpnI GATC 4 cut(s) 229, 434, 1133, 1374
DpnII GATC 4 cut(s) 227, 432, 1131, 1372
DraI TTTAAA 1 cut(s) 501
DraIII CACNNNGTG 1 cut(s) 1461
DriI GACNNNNNGTC 1 cut(s) 1219
EaeI YGGCCR 1 cut(s) 329
Eam1104I CTCTTC 2 cut(s) 1038, 1388
Eam1105I GACNNNNNGTC 1 cut(s) 1219
EarI CTCTTC 2 cut(s) 1038, 1388
Eco130I CCWWGG 2 cut(s) 332, 363
Eco24I GRGCYC 2 cut(s) 510, 1711
Eco31I GGTCTC 1 cut(s) 1621
Eco32I GATATC 1 cut(s) 306
Eco47I GGWCC 1 cut(s) 1221
Eco57I CTGAAG 1 cut(s) 1229
EcoO109I RGGNCCY 1 cut(s) 75
EcoRII CCWGG 4 cut(s) 69, 322, 386, 750
EcoRV GATATC 1 cut(s) 306
EcoT14I CCWWGG 2 cut(s) 332, 363
EcoT22I ATGCAT 1 cut(s) 258
EcoT38I GRGCYC 2 cut(s) 510, 1711
ErhI CCWWGG 2 cut(s) 332, 363
FalI AAGNNNNNCTT 2 cut(s) 848, 880
FaqI GGGAC 1 cut(s) 206
FbaI TGATCA 1 cut(s) 1131
FblI GTMKAC 1 cut(s) 1757
Fnu4HI GCNGC 4 cut(s) 213, 1509, 1717, 1787
FokI GGATG 7 cut(s) 140, 485, 602, 690, 767, 1105, 1295
FriOI GRGCYC 2 cut(s) 510, 1711
Fsp4HI GCNGC 4 cut(s) 213, 1509, 1717, 1787
FspBI CTAG 4 cut(s) 218, 588, 983, 1076
GlaI GCGC 1 cut(s) 1232
GluI GCNGC 4 cut(s) 213, 1509, 1717, 1787
GsuI CTGGAG 1 cut(s) 1700
HaeII RGCGCY 1 cut(s) 1234
HaeIII GGCC 3 cut(s) 43, 77, 331
HapII CCGG 3 cut(s) 576, 767, 828
HhaI GCGC 1 cut(s) 1233
Hin6I GCGC 1 cut(s) 1231
HinP1I GCGC 1 cut(s) 1231
HinfI GANTC 5 cut(s) 543, 804, 824, 1186, 1247
HpaII CCGG 3 cut(s) 576, 767, 828
HphI GGTGA 3 cut(s) 214, 226, 1487
Hpy166II GTNNAC 2 cut(s) 698, 1758
Hpy188III TCNNGA 4 cut(s) 707, 1098, 1543, 1652
Hpy8I GTNNAC 2 cut(s) 698, 1758
Hpy99I CGWCG 1 cut(s) 1716
HpyAV CCTTC 9 cut(s) 88, 521, 527, 1204, 1212, 1244, 1388, 1534, 1600
HpyCH4III ACNGT 5 cut(s) 8, 292, 1023, 1129, 1343
HpyCH4IV ACGT 2 cut(s) 1013, 1143
HpyCH4V TGCA 8 cut(s) 86, 183, 212, 256, 486, 596, 785, 1242
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 328, 483, 593, 1239
HpyF3I CTNAG 3 cut(s) 375, 896, 1674
HpySE526I ACGT 2 cut(s) 1013, 1143
HspAI GCGC 1 cut(s) 1231
KpnI GGTACC 1 cut(s) 1783
Ksp22I TGATCA 1 cut(s) 1131
Kzo9I GATC 4 cut(s) 227, 432, 1131, 1372
LguI GCTCTTC 1 cut(s) 1388
LmnI GCTCC 3 cut(s) 513, 638, 1750
Lsp1109I GCAGC 2 cut(s) 224, 1495
LweI GCATC 2 cut(s) 772, 1257
MaeI CTAG 4 cut(s) 218, 588, 983, 1076
MaeII ACGT 2 cut(s) 1013, 1143
MaeIII GTNAC 2 cut(s) 127, 348
MalI GATC 4 cut(s) 229, 434, 1133, 1374
MboI GATC 4 cut(s) 227, 432, 1131, 1372
MfeI CAATTG 1 cut(s) 1751
MhlI GDGCHC 2 cut(s) 510, 1711
MlsI TGGCCA 1 cut(s) 331
MluNI TGGCCA 1 cut(s) 331
MlyI GAGTC 2 cut(s) 833, 1241
MmeI TCCRAC 1 cut(s) 1554
Mox20I TGGCCA 1 cut(s) 331
Mph1103I ATGCAT 1 cut(s) 258
MroXI GAANNNNTTC 1 cut(s) 1669
MscI TGGCCA 1 cut(s) 331
MslI CAYNNNNRTG 3 cut(s) 86, 239, 293
Msp20I TGGCCA 1 cut(s) 331
MspA1I CMGCKG 1 cut(s) 1678
MspCI CTTAAG 1 cut(s) 1253
MspI CCGG 3 cut(s) 576, 767, 828
MspR9I CCNGG 5 cut(s) 71, 324, 388, 752, 767
MunI CAATTG 1 cut(s) 1751
Mva1269I GAATGC 1 cut(s) 596
MvaI CCWGG 4 cut(s) 71, 324, 388, 752
MwoI GCNNNNNNNGC 5 cut(s) 83, 328, 483, 593, 1239
NciI CCSGG 1 cut(s) 767
NcoI CCATGG 1 cut(s) 332
NdeII GATC 4 cut(s) 227, 432, 1131, 1372
NlaIV GGNNCC 6 cut(s) 76, 509, 640, 1447, 1650, 1781
NsiI ATGCAT 1 cut(s) 258
NspI RCATGY 1 cut(s) 1522
OliI CACNNNNGTG 1 cut(s) 293
PasI CCCWGGG 1 cut(s) 70
PciI ACATGT 1 cut(s) 1518
PciSI GCTCTTC 1 cut(s) 1388
PcsI WCGNNNNNNNCGW 1 cut(s) 1720
PctI GAATGC 1 cut(s) 596
PdmI GAANNNNTTC 1 cut(s) 1669
PfeI GAWTC 3 cut(s) 543, 804, 1186
PflMI CCANNNNNTGG 1 cut(s) 1626
PfoI TCCNGGA 1 cut(s) 750
PkrI GCNGC 4 cut(s) 214, 1510, 1718, 1788
PleI GAGTC 2 cut(s) 832, 1241
PpsI GAGTC 2 cut(s) 832, 1241
PscI ACATGT 1 cut(s) 1518
Psp6I CCWGG 4 cut(s) 69, 322, 386, 750
PspGI CCWGG 4 cut(s) 69, 322, 386, 750
PspN4I GGNNCC 6 cut(s) 76, 509, 640, 1447, 1650, 1781
PspPI GGNCC 2 cut(s) 75, 1221
PsrI GAACNNNNNNTAC 2 cut(s) 1414, 1446
PstI CTGCAG 1 cut(s) 214
PvuII CAGCTG 1 cut(s) 1678
RsaI GTAC 7 cut(s) 283, 633, 928, 1008, 1263, 1423, 1781
RsaNI GTAC 7 cut(s) 282, 632, 927, 1007, 1262, 1422, 1780
RseI CAYNNNNRTG 3 cut(s) 86, 239, 293
SapI GCTCTTC 1 cut(s) 1388
SatI GCNGC 4 cut(s) 213, 1509, 1717, 1787
Sau3AI GATC 4 cut(s) 227, 432, 1131, 1372
Sau96I GGNCC 2 cut(s) 75, 1221
ScaI AGTACT 1 cut(s) 1423
SchI GAGTC 2 cut(s) 833, 1241
ScrFI CCNGG 5 cut(s) 71, 324, 388, 752, 767
SduI GDGCHC 2 cut(s) 510, 1711
SfaNI GCATC 2 cut(s) 772, 1257
SfcI CTRYAG 1 cut(s) 210
SinI GGWCC 1 cut(s) 1221
SmiMI CAYNNNNRTG 3 cut(s) 86, 239, 293
SmlI CTYRAG 2 cut(s) 821, 1253
SmoI CTYRAG 2 cut(s) 821, 1253
SpeI ACTAGT 1 cut(s) 982
SsiI CCGC 4 cut(s) 132, 1646, 1717, 1786
SspI AATATT 2 cut(s) 24, 604
SspMI CTAG 4 cut(s) 218, 588, 983, 1076
StyD4I CCNGG 5 cut(s) 69, 322, 386, 750, 765
StyI CCWWGG 2 cut(s) 332, 363
TaaI ACNGT 5 cut(s) 8, 292, 1023, 1129, 1343
TaiI ACGT 2 cut(s) 1016, 1146
TaqI TCGA 5 cut(s) 1137, 1273, 1354, 1544, 1723
TatI WGTACW 3 cut(s) 631, 1006, 1421
TauI GCSGC 2 cut(s) 1719, 1789
TfiI GAWTC 3 cut(s) 543, 804, 1186
TscAI CASTG 3 cut(s) 13, 295, 1134
TseI GCWGC 2 cut(s) 212, 1508
TspRI CASTG 3 cut(s) 13, 295, 1134
Van91I CCANNNNNTGG 1 cut(s) 1626
Vha464I CTTAAG 1 cut(s) 1253
VpaK11BI GGWCC 1 cut(s) 1221
XapI RAATTY 4 cut(s) 56, 270, 913, 1622
XceI RCATGY 1 cut(s) 1522
XcmI CCANNNNNNNNNTGG 1 cut(s) 330
XmiI GTMKAC 1 cut(s) 1757
XmnI GAANNNNTTC 1 cut(s) 1669
XspI CTAG 4 cut(s) 218, 588, 983, 1076
ZrmI AGTACT 1 cut(s) 1423
Zsp2I ATGCAT 1 cut(s) 258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.