Rroxscaffold_159G00432960

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000159
OG0000119
Physical Location & Seq
Forward (+)
666469 .. 670487
4019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_159G00432960.1

Sequence Viewer

Length: 1866 bp
ATGTATAAGCAGCGTGTCCCCGTTGAGAACGATGATACCTATATGATGAGCACAACACGAGGTACGAACTATGATTTCGAAAGTGTTGAGGAGCAAGGGCGAGGTGGTTCATCGAAAACTGTAGATGCACTTTCAACCAAGAAAAAATTGAAAATTGCACTTCTTTCCGTTTCATTGTGGAACAAGCTATTCCTAATCGCATGTGTGATTGCAGTCTCATTAGACCCCTTGTTCTTTTACATTCCAATCATCATTGAAGATGAAAAGTGTCTTGGAATAGACAAAGAGTTGAGGACTATAGCTCTCATTTTGCGATCCCTCACTGATATCATTTTCATAGTGCATATTGTATATCAAATTTGCGAAGCTACTATGGCGGCCTACAAAGTACACATAAAAGGAAAGTCGGAATTGGAATTGGATTGGTCATATTCGAAGATATCAATGGGTGAGATAATTCCATTTGCTAAATTAGTTGCTGGGAAGCTAGCATGGCGCTCCACGCTAACTGATATTTTGGCTGTTCTTCCCATGCCACAATTTCTAGTGGTCTTTGGTTTCTTCAAAATGAGAGGCCGTGGATATTTGGAACGCAAGAAGATTCTCAATGTCTTTCTCCTGGGTCAATATTTGCCAAGGATTTATCGAATTTACTTATCATCTAAGGAACTTAGACAAACTACAGGAATTTGGGTTAAGGCTCTGTTCAACTTTTTTCTGTATATACTAGCCAGTCATGTCATTGGAGCTTTTTGGTACTTCTTTTCTATTCAACGTGAGACATCATGCTGGCATCATGCTTGTATAAAGAATAGTACAAATGTCGAAGGATGTATGAGTACTTTCTACTGTGATGGTCGCAATACTACCGCTAGAAATGTCACTTTTTTCAATCAGTTTTGCCAAATCAATGTTGAAGACAATGCTACAGCGCTTTTTGATTTTGGAATATTTCTTAATTCTCTCAAGAATGGTAACACGGGCCATATACATTTTGCAACAAAGTTGTCCTACTCATTTTGGTGGGGATTGCGGAATCTGAGCGAGCTTCTTGCTGCAGATGGGGGACATGATGAGAAGAGAATGTTACATGCTTATGCACACAAACTCATAGACACCTTTATGTCCATGGAAGCCCAAAGATGGGAGGTTATAAGAAACAAGATGCTTTTGAAAGAGAAAGATATAGAAAGATGGATGGACAGGAATGAACTGCCCGATGATATGAAGAAAGAAATCAAGAAAAACATAACGCAGAAATTGGAAGAAAACAAAGATTCAGATCTGGAGAACCTTTTCAATATTCTTCCCTGGTACACCAAAAAGTACCTAAAGCGAGTTCTCTGCATGGACATACTAAAGAAAGTACCTAAACTGGAAAGAATGGATGAGAAAGTGTTGAAAATGATCTGCGACTATCTAAAGCCAGAGATGTATGCTGAGGGCACCATGGTTTTTCACATGGGAGAACCGCTTGATAGCATGCTATTCATTACAGAAGGCACTATACTGACCTACAAAACTACCGGTACTGATAATCATGCTCATGAAAACGCAAAATTGGGTCCTCCTGCATCCCCATCAATCGGCACCCTTGAGAAAGGCTACTTCTATGGCGAACAACTGCTGCACTGGGCATCACAAAAAAACGTGAATTTAACGGAGGTCCCTAGCTCTGCCGACAATGTGAAGTGCCATACAAAAGTAGAAGGCTTTGTTCTCATGGCCAAGGACTTAAGAACTGTGGTCTCCAAATGTGAGTACTGGTGGAAATTAAGCATTAGTAATCCTAGAGTGGGTGGTACTCGGACCACACCAAATGCTAGGAATGTGCAGCAGAAACCTGGAGTGGATCCCCAGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

621

Amino Acids

71.68

Weight (kDa)

8.84

Isoelectric Point (pI)

40.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000119)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g10570 FvH4_4g36390 FvH4_7g31840 FvH4_7g31840 FvH4_7g31850 FvH4_7g31850 FvH4_7g31861 FvH4_7g31861 FvH4_7g31950
malus_domestica MD01G1054600.v1.1 MD01G1221100.v1.1 MD01G1221400.v1.1 MD01G1221600.v1.1 MD01G1221800.v1.1 MD01G1222000.v1.1 MD01G1222100.v1.1 MD07G1140800.v1.1 MD07G1291200.v1.1 MD07G1291400.v1.1 MD07G1291500.v1.1 MD07G1291700.v1.1 MD07G1292500.v1.1 MD07G1292700.v1.1 MD07G1292800.v1.1 MD07G1292900.v1.1 MD08G1241600.v1.1 MD11G1083800.v1.1 MD15G1431600.v1.1
prunus_persica Prupe.1G017800_v2.0.a1 Prupe.1G017800_v2.0.a1 Prupe.1G162800_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312500_v2.0.a1 Prupe.2G312700_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092600_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.4G092800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G142800_v2.0.a1 Prupe.6G143000_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1 Prupe.6G143100_v2.0.a1
pyrus_communis pycom01g23050 pycom01g23070 pycom01g23090 pycom01g23100 pycom01g23110 pycom01g23120 pycom01g23170 pycom07g26410 pycom07g26440 pycom07g26470 pycom07g26480 pycom07g26490 pycom07g26500 pycom07g26510 pycom07g26530 pycom07g26540 pycom07g26570 pycom07g26580 pycom07g26590 pycom08g20940
rosa_chinensis RchiOBHm_Chr1g0324571 RchiOBHm_Chr1g0336181 RchiOBHm_Chr1g0381061 RchiOBHm_Chr1g0381091 RchiOBHm_Chr1g0381121 RchiOBHm_Chr1g0381131 RchiOBHm_Chr1g0381141 RchiOBHm_Chr1g0381161 RchiOBHm_Chr1g0381211 RchiOBHm_Chr2g0110361 RchiOBHm_Chr2g0120231 RchiOBHm_Chr3g0486281 RchiOBHm_Chr3g0486311 RchiOBHm_Chr3g0486401 RchiOBHm_Chr4g0409511 RchiOBHm_Chr4g0409521 RchiOBHm_Chr5g0017271 RchiOBHm_Chr5g0048781 RchiOBHm_Chr5g0048811
rosa_laevigata RLG00000002401 RLG00000008559 RLG00000017798 RLG00000017799 RLG00000023082 RLG00000023088 RLG00000026230 RLG00000026238 RLG00000026240 RLG00000026241 RLG00000026242 RLG00000026243 RLG00000026244 RLG00000026246 RLG00000026247 RLG00000026248 RLG00000029876 RLG00000030189 RLG00000034579
rosa_multiflora Rmu_co8101374.1_g000001 Rmu_co8309149.1_g000001 Rmu_co8450063.1_g000001 Rmu_sc0000441.1_g000094 Rmu_sc0000479.1_g000005 Rmu_sc0000647.1_g000006 Rmu_sc0001393.1_g000031 Rmu_sc0001423.1_g000037 Rmu_sc0001616.1_g000015 Rmu_sc0001857.1_g000011 Rmu_sc0002183.1_g000013 Rmu_sc0002183.1_g000028 Rmu_sc0002183.1_g000030 Rmu_sc0002688.1_g000003 Rmu_sc0002688.1_g000020 Rmu_sc0003801.1_g000003 Rmu_sc0003801.1_g000004 Rmu_sc0004125.1_g000006 Rmu_sc0004494.1_g000005 Rmu_sc0004494.1_g000006 Rmu_sc0004494.1_g000008 Rmu_sc0004494.1_g000009 Rmu_sc0005842.1_g000004 Rmu_sc0006872.1_g000001 Rmu_sc0006872.1_g000005 Rmu_sc0006872.1_g000009 Rmu_sc0006872.1_g000010 Rmu_sc0008053.1_g000026
rosa_roxburghii Rroxscaffold_159G00432960 Rroxscaffold_1G00033060 Rroxscaffold_2G00123150 Rroxscaffold_2G00123170 Rroxscaffold_2G00133500 Rroxscaffold_2G00133550 Rroxscaffold_4G00278650 Rroxscaffold_4G00278750 Rroxscaffold_4G00278790 Rroxscaffold_4G00278800 Rroxscaffold_4G00278810 Rroxscaffold_4G00325390 Rroxscaffold_5G00354010 Rroxscaffold_6G00395890 Rroxscaffold_6G00395900 Rroxscaffold_6G00395920
rosa_rugosa Rorug01G0046900.1 Rorug01G0427000 Rorug01G0427100 Rorug01G0427200 Rorug01G0427300 Rorug01G0427400 Rorug01G0427500 Rorug01G0427500 Rorug01G0427600 Rorug01G0427600 Rorug01G0427700 Rorug01G0427700 Rorug01G0427800 Rorug01G0428700 Rorug02G0166400 Rorug02G0166500 Rorug02G0166500 Rorug02G0166600 Rorug02G0166600 Rorug02G0166700 Rorug02G0167300 Rorug02G0167300 Rorug02G0167300 Rorug03G0224600 Rorug03G0224600 Rorug04G0094400 Rorug05G0241100 Rorug05G0241200
rosa_samantha Rh1BG407700 Rh1BG407900 Rh1BG409000 Rh1CG064700 Rh1CG420900 Rh1CG421000 Rh1CG421200 Rh1CG421300 Rh1CG421800 Rh1CG421900 Rh1CG422000 Rh1CG422200 Rh1CG422300 Rh1CG423600 Rh1DG437600 Rh1DG438900 Rh1DG439000 Rh1DG440300 Rh2AG219100 Rh2CG220700 Rh2DG225300 Rh3AG274400 Rh3AG274600 Rh3CG308900 Rh3DG305800 Rh4AG156400 Rh5AG129000 Rh5AG320900 Rh5CG139600
rosa_wichuraiana Rw1G005300 Rw1G039280 Rw1G039300 Rw1G039310 Rw1G039320 Rw1G039330 Rw1G039340 Rw1G039360 Rw1G039390 Rw2G016910 Rw2G022800 Rw3G024330 Rw3G024340 Rw3G024350 Rw3G024400 Rw4G012810 Rw5G030120 Rw5G030280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1154
AccB1I GGYRCC 2 cut(s) 1445, 1589
AciI CCGC 4 cut(s) 377, 870, 1033, 1472
AclWI GGATC 3 cut(s) 309, 1847, 1860
AcoI YGGCCR 1 cut(s) 1725
AcsI RAATTY 4 cut(s) 357, 648, 687, 1654
AfeI AGCGCT 1 cut(s) 933
AfiI CCNNNNNNNGG 4 cut(s) 1143, 1144, 1586, 1796
AflII CTTAAG 1 cut(s) 1735
AgeI ACCGGT 1 cut(s) 1526
AjnI CCWGG 3 cut(s) 618, 1310, 1843
AjuI GAANNNNNNNTTGG 2 cut(s) 255, 287
AluBI AGCT 7 cut(s) 187, 302, 368, 487, 749, 1048, 1674
AluI AGCT 7 cut(s) 187, 302, 368, 487, 749, 1048, 1674
Alw21I GWGCWC 1 cut(s) 53
Alw26I GTCTC 3 cut(s) 220, 773, 1753
AlwI GGATC 3 cut(s) 309, 1847, 1860
Aor51HI AGCGCT 1 cut(s) 933
AoxI GGCC 4 cut(s) 378, 574, 982, 1725
ApeKI GCWGC 4 cut(s) 10, 1055, 1627, 1834
ApoI RAATTY 4 cut(s) 357, 648, 687, 1654
AsiGI ACCGGT 1 cut(s) 1526
Asp700I GAANNNNTTC 1 cut(s) 1295
AspLEI GCGC 2 cut(s) 498, 934
AspS9I GGNCC 4 cut(s) 982, 1565, 1666, 1809
AsuHPI GGTGA 1 cut(s) 461
AsuII TTCGAA 2 cut(s) 78, 434
AsuNHI GCTAGC 1 cut(s) 487
AvaII GGWCC 3 cut(s) 1565, 1666, 1809
BaeGI GKGCMC 1 cut(s) 1448
BalI TGGCCA 1 cut(s) 1727
BamHI GGATCC 1 cut(s) 1852
BanI GGYRCC 2 cut(s) 1445, 1589
BarI GAAGNNNNNNTAC 2 cut(s) 1491, 1523
BauI CACGAG 1 cut(s) 57
BbsI GAAGAC 1 cut(s) 924
Bbv12I GWGCWC 1 cut(s) 53
BbvCI CCTCAGC 1 cut(s) 1440
BbvI GCAGC 4 cut(s) 22, 1042, 1614, 1846
BccI CCATC 6 cut(s) 848, 1055, 1137, 1188, 1192, 1588
BceAI ACGGC 1 cut(s) 561
BcgI CGANNNNNNTGC 4 cut(s) 1034, 1068, 1326, 1360
BciT130I CCWGG 3 cut(s) 620, 1312, 1845
BcoDI GTCTC 3 cut(s) 220, 773, 1753
BfaI CTAG 8 cut(s) 488, 545, 728, 873, 1671, 1791, 1824, 1864
BfmI CTRYAG 5 cut(s) 120, 297, 681, 927, 1056
BfoI RGCGCY 2 cut(s) 499, 935
BfrI CTTAAG 1 cut(s) 1735
BglII AGATCT 1 cut(s) 1282
BisI GCNGC 5 cut(s) 11, 378, 1056, 1628, 1835
BlsI GCNGC 5 cut(s) 12, 379, 1057, 1629, 1836
BmcAI AGTACT 3 cut(s) 841, 1763, 1862
Bme1390I CCNGG 3 cut(s) 620, 1312, 1845
Bme18I GGWCC 3 cut(s) 1565, 1666, 1809
BmgT120I GGNCC 4 cut(s) 982, 1565, 1666, 1809
BmiI GGNNCC 5 cut(s) 1447, 1566, 1591, 1668, 1854
BmrFI CCNGG 3 cut(s) 620, 1312, 1845
BmrI ACTGGG 2 cut(s) 1642, 1852
BmsI GCATC 5 cut(s) 115, 802, 1155, 1583, 1646
BmtI GCTAGC 1 cut(s) 491
BmuI ACTGGG 2 cut(s) 1642, 1852
BpiI GAAGAC 1 cut(s) 924
BpmI CTGGAG 2 cut(s) 1307, 1866
Bpu10I CCTNAGC 1 cut(s) 1440
Bpu14I TTCGAA 2 cut(s) 78, 434
BpuEI CTTGAG 2 cut(s) 950, 1616
BsaBI GATNNNNATC 1 cut(s) 1281
BsaI GGTCTC 1 cut(s) 1753
BsaJI CCNNGG 7 cut(s) 577, 619, 635, 1128, 1310, 1449, 1728
BsaWI WCCGGW 1 cut(s) 1526
Bsc4I CCNNNNNNNGG 4 cut(s) 1143, 1144, 1586, 1796
Bse118I RCCGGY 1 cut(s) 1526
Bse1I ACTGG 5 cut(s) 732, 1380, 1637, 1769, 1858
Bse8I GATNNNNATC 1 cut(s) 1281
BseBI CCWGG 3 cut(s) 620, 1312, 1845
BseDI CCNNGG 7 cut(s) 577, 619, 635, 1128, 1310, 1449, 1728
BseGI GGATG 4 cut(s) 836, 1203, 1393, 1574
BseJI GATNNNNATC 1 cut(s) 1281
BseLI CCNNNNNNNGG 4 cut(s) 1143, 1144, 1586, 1796
BseMII CTCAG 2 cut(s) 1031, 1431
BseNI ACTGG 5 cut(s) 732, 1380, 1637, 1769, 1858
BseRI GAGGAG 1 cut(s) 104
BseSI GKGCMC 1 cut(s) 1448
BseXI GCAGC 4 cut(s) 22, 1042, 1614, 1846
BseYI CCCAGC 1 cut(s) 479
BsgI GTGCAG 2 cut(s) 1613, 1853
BshFI GGCC 4 cut(s) 380, 576, 984, 1727
BshNI GGYRCC 2 cut(s) 1445, 1589
BshTI ACCGGT 1 cut(s) 1526
BsiHKAI GWGCWC 1 cut(s) 53
BsiSI CCGG 1 cut(s) 1527
BslFI GGGAC 3 cut(s) 2, 1080, 1652
BslI CCNNNNNNNGG 4 cut(s) 1143, 1144, 1586, 1796
BsmAI GTCTC 3 cut(s) 220, 773, 1753
BsmFI GGGAC 3 cut(s) 2, 1080, 1652
BsnI GGCC 4 cut(s) 380, 576, 984, 1727
Bso31I GGTCTC 1 cut(s) 1753
Bsp119I TTCGAA 2 cut(s) 78, 434
Bsp1286I GDGCHC 2 cut(s) 53, 1448
Bsp143I GATC 4 cut(s) 314, 1282, 1407, 1852
Bsp19I CCATGG 2 cut(s) 1128, 1449
BspACI CCGC 4 cut(s) 377, 870, 1033, 1472
BspANI GGCC 4 cut(s) 380, 576, 984, 1727
BspCNI CTCAG 2 cut(s) 1032, 1432
BspHI TCATGA 1 cut(s) 1546
BspLI GGNNCC 5 cut(s) 1447, 1566, 1591, 1668, 1854
BspMAI CTGCAG 1 cut(s) 1060
BspOI GCTAGC 1 cut(s) 491
BspPI GGATC 3 cut(s) 309, 1847, 1860
BspT104I TTCGAA 2 cut(s) 78, 434
BspT107I GGYRCC 2 cut(s) 1445, 1589
BspTI CTTAAG 1 cut(s) 1735
BspTNI GGTCTC 1 cut(s) 1753
BsrFI RCCGGY 1 cut(s) 1526
BsrI ACTGG 5 cut(s) 732, 1380, 1637, 1769, 1858
BssAI RCCGGY 1 cut(s) 1526
BssECI CCNNGG 7 cut(s) 577, 619, 635, 1128, 1310, 1449, 1728
BssMI GATC 4 cut(s) 314, 1282, 1407, 1852
BssSI CACGAG 1 cut(s) 57
BssT1I CCWWGG 4 cut(s) 635, 1128, 1449, 1728
Bst2BI CACGAG 1 cut(s) 57
Bst2UI CCWGG 3 cut(s) 620, 1312, 1845
Bst4CI ACNGT 3 cut(s) 121, 851, 1744
Bst6I CTCTTC 1 cut(s) 1073
BstAFI CTTAAG 1 cut(s) 1735
BstBI TTCGAA 2 cut(s) 78, 434
BstC8I GCNNGC 4 cut(s) 489, 791, 1046, 1484
BstDEI CTNAG 4 cut(s) 663, 671, 1040, 1440
BstDSI CCRYGG 3 cut(s) 577, 1128, 1449
BstF5I GGATG 4 cut(s) 836, 1203, 1393, 1574
BstH2I RGCGCY 2 cut(s) 499, 935
BstHHI GCGC 2 cut(s) 498, 934
BstKTI GATC 4 cut(s) 317, 1285, 1410, 1855
BstMAI GTCTC 3 cut(s) 220, 773, 1753
BstMBI GATC 4 cut(s) 314, 1282, 1407, 1852
BstMWI GCNNNNNNNGC 3 cut(s) 374, 493, 502
BstNI CCWGG 3 cut(s) 620, 1312, 1845
BstNSI RCATGY 3 cut(s) 204, 1094, 1486
BstSCI CCNGG 3 cut(s) 618, 1310, 1843
BstSFI CTRYAG 5 cut(s) 120, 297, 681, 927, 1056
BstSLI GKGCMC 1 cut(s) 1448
BstV1I GCAGC 4 cut(s) 22, 1042, 1614, 1846
BstV2I GAAGAC 1 cut(s) 924
BstX2I RGATCY 2 cut(s) 1282, 1852
BstYI RGATCY 2 cut(s) 1282, 1852
BsuRI GGCC 4 cut(s) 380, 576, 984, 1727
BtgI CCRYGG 3 cut(s) 577, 1128, 1449
BtsCI GGATG 4 cut(s) 836, 1203, 1393, 1574
BtsIMutI CAGTG 2 cut(s) 321, 1630
Cac8I GCNNGC 4 cut(s) 489, 791, 1046, 1484
CciI TCATGA 1 cut(s) 1546
CfoI GCGC 2 cut(s) 498, 934
Cfr10I RCCGGY 1 cut(s) 1526
Cfr13I GGNCC 4 cut(s) 982, 1565, 1666, 1809
CspAI ACCGGT 1 cut(s) 1526
DdeI CTNAG 4 cut(s) 663, 671, 1040, 1440
DpnI GATC 4 cut(s) 316, 1284, 1409, 1854
DpnII GATC 4 cut(s) 314, 1282, 1407, 1852
EaeI YGGCCR 1 cut(s) 1725
Eam1104I CTCTTC 1 cut(s) 1073
EarI CTCTTC 1 cut(s) 1073
Eco130I CCWWGG 4 cut(s) 635, 1128, 1449, 1728
Eco31I GGTCTC 1 cut(s) 1753
Eco32I GATATC 2 cut(s) 328, 441
Eco47I GGWCC 3 cut(s) 1565, 1666, 1809
Eco47III AGCGCT 1 cut(s) 933
EcoO109I RGGNCCY 2 cut(s) 1565, 1666
EcoRII CCWGG 3 cut(s) 618, 1310, 1843
EcoRV GATATC 2 cut(s) 328, 441
EcoT14I CCWWGG 4 cut(s) 635, 1128, 1449, 1728
ErhI CCWWGG 4 cut(s) 635, 1128, 1449, 1728
FaqI GGGAC 3 cut(s) 2, 1080, 1652
Fnu4HI GCNGC 5 cut(s) 11, 378, 1056, 1628, 1835
FokI GGATG 4 cut(s) 843, 1210, 1400, 1561
Fsp4HI GCNGC 5 cut(s) 11, 378, 1056, 1628, 1835
FspBI CTAG 8 cut(s) 488, 545, 728, 873, 1671, 1791, 1824, 1864
GlaI GCGC 2 cut(s) 497, 933
GluI GCNGC 5 cut(s) 11, 378, 1056, 1628, 1835
GsaI CCCAGC 1 cut(s) 483
GsuI CTGGAG 2 cut(s) 1307, 1866
HaeII RGCGCY 2 cut(s) 499, 935
HaeIII GGCC 4 cut(s) 380, 576, 984, 1727
HapII CCGG 1 cut(s) 1527
HhaI GCGC 2 cut(s) 498, 934
Hin6I GCGC 2 cut(s) 496, 932
HinP1I GCGC 2 cut(s) 496, 932
HinfI GANTC 3 cut(s) 601, 1036, 1277
HpaII CCGG 1 cut(s) 1527
HphI GGTGA 1 cut(s) 461
Hpy166II GTNNAC 2 cut(s) 391, 1317
Hpy188I TCNGA 4 cut(s) 409, 1041, 1282, 1809
Hpy188III TCNNGA 4 cut(s) 967, 1240, 1286, 1547
Hpy8I GTNNAC 2 cut(s) 391, 1317
HpyAV CCTTC 3 cut(s) 821, 1493, 1703
HpyCH4III ACNGT 3 cut(s) 121, 851, 1744
HpyCH4IV ACGT 2 cut(s) 775, 1650
HpyF10VI GCNNNNNNNGC 3 cut(s) 374, 493, 502
HpyF3I CTNAG 4 cut(s) 663, 671, 1040, 1440
HpySE526I ACGT 2 cut(s) 775, 1650
HspAI GCGC 2 cut(s) 496, 932
Kzo9I GATC 4 cut(s) 314, 1282, 1407, 1852
LmnI GCTCC 3 cut(s) 91, 503, 746
Lsp1109I GCAGC 4 cut(s) 22, 1042, 1614, 1846
LweI GCATC 5 cut(s) 115, 802, 1155, 1583, 1646
MaeI CTAG 8 cut(s) 488, 545, 728, 873, 1671, 1791, 1824, 1864
MaeII ACGT 2 cut(s) 775, 1650
MaeIII GTNAC 3 cut(s) 880, 974, 1086
MalI GATC 4 cut(s) 316, 1284, 1409, 1854
MboI GATC 4 cut(s) 314, 1282, 1407, 1852
MflI RGATCY 2 cut(s) 1282, 1852
MhlI GDGCHC 2 cut(s) 53, 1448
MlsI TGGCCA 1 cut(s) 1727
MluNI TGGCCA 1 cut(s) 1727
MmeI TCCRAC 1 cut(s) 387
Mox20I TGGCCA 1 cut(s) 1727
MroXI GAANNNNTTC 1 cut(s) 1295
MscI TGGCCA 1 cut(s) 1727
MseI TTAA 5 cut(s) 696, 957, 1658, 1736, 1775
MslI CAYNNNNRTG 4 cut(s) 1021, 1095, 1121, 1545
Msp20I TGGCCA 1 cut(s) 1727
MspCI CTTAAG 1 cut(s) 1735
MspI CCGG 1 cut(s) 1527
MspR9I CCNGG 3 cut(s) 620, 1312, 1845
MvaI CCWGG 3 cut(s) 620, 1312, 1845
MwoI GCNNNNNNNGC 3 cut(s) 374, 493, 502
NcoI CCATGG 2 cut(s) 1128, 1449
NdeII GATC 4 cut(s) 314, 1282, 1407, 1852
NheI GCTAGC 1 cut(s) 487
NlaIV GGNNCC 5 cut(s) 1447, 1566, 1591, 1668, 1854
NmuCI GTSAC 1 cut(s) 880
NspI RCATGY 3 cut(s) 204, 1094, 1486
NspV TTCGAA 2 cut(s) 78, 434
PaeI GCATGC 1 cut(s) 1486
PagI TCATGA 1 cut(s) 1546
PdmI GAANNNNTTC 1 cut(s) 1295
PfeI GAWTC 3 cut(s) 601, 1036, 1277
PinAI ACCGGT 1 cut(s) 1526
PkrI GCNGC 5 cut(s) 12, 379, 1057, 1629, 1836
PpuMI RGGWCCY 2 cut(s) 1565, 1666
PsiI TTATAA 1 cut(s) 1154
Psp5II RGGWCCY 2 cut(s) 1565, 1666
Psp6I CCWGG 3 cut(s) 618, 1310, 1843
PspFI CCCAGC 1 cut(s) 479
PspGI CCWGG 3 cut(s) 618, 1310, 1843
PspN4I GGNNCC 5 cut(s) 1447, 1566, 1591, 1668, 1854
PspPI GGNCC 4 cut(s) 982, 1565, 1666, 1809
PspPPI RGGWCCY 2 cut(s) 1565, 1666
PstI CTGCAG 1 cut(s) 1060
PsuI RGATCY 2 cut(s) 1282, 1852
RseI CAYNNNNRTG 4 cut(s) 1021, 1095, 1121, 1545
SaqAI TTAA 5 cut(s) 696, 957, 1658, 1736, 1775
SatI GCNGC 5 cut(s) 11, 378, 1056, 1628, 1835
Sau3AI GATC 4 cut(s) 314, 1282, 1407, 1852
Sau96I GGNCC 4 cut(s) 982, 1565, 1666, 1809
ScaI AGTACT 3 cut(s) 841, 1763, 1862
ScrFI CCNGG 3 cut(s) 620, 1312, 1845
SduI GDGCHC 2 cut(s) 53, 1448
SfaNI GCATC 5 cut(s) 115, 802, 1155, 1583, 1646
SfcI CTRYAG 5 cut(s) 120, 297, 681, 927, 1056
SfuI TTCGAA 2 cut(s) 78, 434
SinI GGWCC 3 cut(s) 1565, 1666, 1809
SmiMI CAYNNNNRTG 4 cut(s) 1021, 1095, 1121, 1545
SmlI CTYRAG 3 cut(s) 965, 1595, 1735
SmoI CTYRAG 3 cut(s) 965, 1595, 1735
SphI GCATGC 1 cut(s) 1486
SsiI CCGC 4 cut(s) 377, 870, 1033, 1472
SspI AATATT 3 cut(s) 629, 951, 1303
SspMI CTAG 8 cut(s) 488, 545, 728, 873, 1671, 1791, 1824, 1864
StyD4I CCNGG 3 cut(s) 618, 1310, 1843
StyI CCWWGG 4 cut(s) 635, 1128, 1449, 1728
TaaI ACNGT 3 cut(s) 121, 851, 1744
TaiI ACGT 2 cut(s) 778, 1653
TaqI TCGA 5 cut(s) 78, 113, 434, 646, 825
TatI WGTACW 5 cut(s) 388, 815, 839, 1761, 1860
TauI GCSGC 1 cut(s) 380
TfiI GAWTC 3 cut(s) 601, 1036, 1277
Tru1I TTAA 5 cut(s) 696, 957, 1658, 1736, 1775
Tru9I TTAA 5 cut(s) 696, 957, 1658, 1736, 1775
TscAI CASTG 2 cut(s) 328, 1637
TseFI GTSAC 1 cut(s) 880
TseI GCWGC 4 cut(s) 10, 1055, 1627, 1834
Tsp45I GTSAC 1 cut(s) 880
TspDTI ATGAA 8 cut(s) 99, 162, 276, 325, 1224, 1241, 1480, 1563
TspGWI ACGGA 2 cut(s) 157, 1676
TspRI CASTG 2 cut(s) 328, 1637
Vha464I CTTAAG 1 cut(s) 1735
VpaK11BI GGWCC 3 cut(s) 1565, 1666, 1809
XapI RAATTY 4 cut(s) 357, 648, 687, 1654
XceI RCATGY 3 cut(s) 204, 1094, 1486
XmnI GAANNNNTTC 1 cut(s) 1295
XspI CTAG 8 cut(s) 488, 545, 728, 873, 1671, 1791, 1824, 1864
ZrmI AGTACT 3 cut(s) 841, 1763, 1862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.